gene1	gene2	pval	qval
LARP4B	13q-Amp	0.000104	1
BCOR	20q-Amp	0.000106	1
LARP4B	20q-Amp	0.000106	1
SETD2	20p-Amp	0.000106	1
MVK	20q-Amp	0.00011	1
PTCH1	Del_18q22.1	0.000112	1
LARP4B	Del_18q12.2	0.000114	1
DDX26B	Amp_20q12	0.000116	1
BCORL1	Amp_20q12	0.000117	1
ACVR1B	Del_18q22.1	0.000118	1
ZBTB20	Del_18q21.2	0.000119	1
ARID1A	20q-Amp	0.000132	1
HLA-A	Amp_20p11.21	0.000138	1
GPATCH8	18q-Del	0.000141	1
ZBTB20	Del_18q22.1	0.000147	1
FAM123B	Amp_20q11.21	0.000152	1
SETD2	Del_18q12.2	0.000152	1
BCOR	Amp_13q22.1	0.000153	1
PRKDC	Del_18q21.2	0.000154	1
NLRC4	Del_18q12.2	0.000155	1
MVK	Del_18q12.2	0.000158	1
BMPR2	Amp_20p12.1	0.000158	1
BCOR	Del_18q21.2	0.000165	1
LARP4B	Amp_13q12.2	0.000167	1
BMPR2	20p-Amp	0.000169	1
DDX26B	Amp_20q11.21	0.000173	1
BCOR	Amp_20q12	0.000175	1
RNF43	Del_1p36.11	0.000177	1
NF2	Del_18q12.2	0.000182	1
BMPR2	17p-Del	0.000182	1
MGA	Del_17p12	0.000185	1
C11orf30	Amp_20q12	0.000185	1
PRKDC	Amp_13q22.1	0.000189	1
BCL9	Amp_20p11.21	0.000201	1
PRKDC	Amp_20q13.12	0.000203	1
SETD2	Amp_20p11.21	0.000206	1
CDH1	Del_18q22.1	0.00021	1
ALDH1A3	18q-Del	0.00021	1
CDH1	Del_18q12.2	0.000212	1
LARP4B	18p-Del	0.000215	1
MGA	Del_8p23.2	0.00022	1
DDX26B	18p-Del	0.000235	1
ALPK2	Del_17p12	0.000238	1
DDX26B	20q-Amp	0.000239	1
KDM6A	13q-Amp	0.000246	1
MVK	18q-Del	0.000257	1
ZBTB20	Amp_20p11.21	0.000257	1
C11orf30	13q-Amp	0.000261	1
PTCH1	20q-Amp	0.000276	1
NLRC4	Del_18q21.2	0.000282	1
L1TD1	Amp_20q12	0.000283	1
NLRC4	Del_17p12	0.000294	1
C11orf30	Amp_20q11.21	0.000297	1
BCORL1	20q-Amp	0.000299	1
MGA	Del_14q11.2	0.000307	1
NLRC4	18q-Del	0.000312	1
ACVR1B	Del_18q12.2	0.000318	1
ALPK2	20p-Amp	0.000325	1
LARP4B	Del_17p12	0.000325	1
CDH1	Del_18q21.2	0.00033	1
CDH1	18q-Del	0.000334	1
FBXW7	Amp_20q12	0.000337	1
ALPK2	Del_18p11.31	0.000363	1
MPHOSPH10	18q-Del	0.000366	1
ALDH1A3	Amp_13q12.13	0.000372	1
B2M	Del_18q12.2	0.000378	1
P2RY13	Amp_20q11.21	0.000378	1
GPATCH8	Amp_20q11.21	0.000378	1
SETD2	Del_18q21.2	0.000386	1
DDX26B	Del_18p11.31	0.000389	1
SETD2	18q-Del	0.000394	1
MAP4K3	Amp_20q13.12	0.000398	1
GPATCH8	18p-Del	0.000401	1
BMPR2	Del_8p22	0.000402	1
C11orf30	Amp_13q12.13	0.000408	1
MVK	Amp_13q12.13	0.000412	1
ROS1	Amp_20q11.21	0.000422	1
TP53	ZBTB20	0.000424	1
PRKDC	Del_18q12.2	0.000443	1
ROS1	Del_18q21.2	0.000443	1
LARP4B	Del_18p11.31	0.000448	1
ZBTB20	Del_18p11.31	0.000464	1
HLA-A	20p-Amp	0.000469	1
FAM123B	Amp_20q13.12	0.000475	1
MAPK6	Del_18q22.1	0.000484	1
FKBP9	Del_18q22.1	0.000484	1
ALDH1A3	Del_18q22.1	0.000484	1
MLH1	Del_18q12.2	0.000505	1
MLH1	18q-Del	0.000509	1
FMN2	20q-Amp	0.000509	1
RNF43	TP53	0.000512	1
GPATCH8	Del_17p12	0.000522	1
SETD2	Del_18q22.1	0.000525	1
ALPK2	18p-Del	0.000527	1
ROS1	Amp_20q13.12	0.000532	1
CDH1	Del_18p11.31	0.000534	1
ALDH1A3	Amp_13q22.1	0.000538	1
PRKDC	18q-Del	0.000545	1
FAM123B	Amp_20q12	0.000552	1
MVK	Amp_13q22.1	0.000559	1
BCL9	Amp_20q12	0.000561	1
MGA	8p-Del	0.000562	1
ZBTB20	Del_8p22	0.000562	1
ALDH1A3	Amp_13q12.2	0.000571	1
NLRC4	17p-Del	0.000572	1
ROS1	Amp_20q12	0.000572	1
BCOR	Del_18q12.2	0.000577	1
MVK	Amp_13q12.2	0.000587	1
PTCH1	18p-Del	0.000587	1
SLC26A8	Amp_20q12	0.00059	1
NF2	18q-Del	0.000593	1
RNF43	Del_4q35.1	0.000597	1
PRKDC	Amp_13q12.2	0.00061	1
ZBTB20	18q-Del	0.000612	1
L1TD1	20q-Amp	0.000613	1
C11orf30	Amp_13q22.1	0.000614	1
PRKDC	Del_18q22.1	0.000621	1
CREBBP	18p-Del	0.000634	1
B2M	18q-Del	0.000636	1
ACVR1B	18q-Del	0.00064	1
KDM6A	18q-Del	0.00064	1
GPATCH8	Del_18p11.31	0.000642	1
C11orf30	Amp_13q12.2	0.000656	1
BCOR	13q-Amp	0.000665	1
MAPK6	17p-Del	0.00067	1
MGA	14q-Del	0.00067	1
MLH1	Del_18q21.2	0.000673	1
PRKDC	Amp_20q11.21	0.000673	1
MGA	Amp_20p12.1	0.000678	1
MVK	18p-Del	0.000682	1
MVK	Amp_20p11.21	0.000682	1
ALDH1A3	18p-Del	0.000684	1
SOX9	Amp_20q13.12	0.000688	1
CREBBP	Del_18p11.31	0.000717	1
FBXW7	20q-Amp	0.000723	1
MPHOSPH10	Del_18q21.2	0.000727	1
PRKDC	Amp_20q12	0.000737	1
MAP4K3	Amp_20q12	0.00076	1
NF2	Del_18q22.1	0.000765	1
ASXL1	Del_18q21.2	0.00079	1
FBXW7	22q-Del	0.000812	1
L1TD1	Amp_20q13.12	0.000829	1
RBBP7	20q-Amp	0.000836	1
RB1	Del_18q21.2	0.000837	1
TOP2B	Del_18q21.2	0.000839	1
FMN2	Amp_20q12	0.000857	1
MVK	Del_17p12	0.000872	1
SOX9	8p-Del	0.000874	1
SLC26A8	Amp_20q11.21	0.000876	1
ATM	Amp_20p11.21	0.000883	1
BCOR	Amp_13q12.2	0.000889	1
CDH1	18p-Del	0.00089	1
BCL9	Amp_20q11.21	0.000897	1
SLC26A8	Del_17p12	0.000918	1
ALDH1A3	Del_17p12	0.000918	1
FBXW7	Del_22q13.32	0.000942	1
BCOR	Del_18q22.1	0.000955	1
RNF43	15q-Del	0.000963	1
ZBTB20	20p-Amp	0.000988	1
ZBTB20	Del_8p23.2	0.000988	1
MPHOSPH10	17p-Del	0.000994	1
MAPK6	Del_18q12.2	0.00101	1
PTCH1	Amp_20q12	0.00101	1
SLC26A8	Del_18q12.2	0.00101	1
FKBP9	Del_18q12.2	0.00101	1
BMPR2	Del_15q11.2	0.00102	1
LARP4B	17p-Del	0.00102	1
RB1	Amp_20q13.12	0.00103	1
MVK	Del_18p11.31	0.00106	1
RNF43	Amp_20p12.1	0.00107	1
PTCH1	Del_18p11.31	0.00108	1
MGA	Amp_13q22.1	0.00109	1
ATM	Del_18q12.2	0.0011	1
CHUK	Del_17p12	0.00111	1
TPRKB	Amp_20q13.12	0.00111	1
BCOR	Amp_20p11.21	0.00112	1
FBXW7	Amp_20q11.21	0.00112	1
P2RY13	Amp_20q13.12	0.00113	1
GPATCH8	Amp_20q13.12	0.00113	1
BCOR	20p-Amp	0.00114	1
LARP4B	Del_8p23.2	0.00114	1
BCL9	Amp_20q13.12	0.00115	1
MAP4K3	Amp_20q11.21	0.00115	1
BCOR	18q-Del	0.00116	1
IQCD	Amp_20p11.21	0.00116	1
CREBBP	20p-Amp	0.00116	1
ACVR1B	Amp_20q13.12	0.0012	1
SLC26A8	20q-Amp	0.0012	1
MVK	Del_8p22	0.00122	1
NLRC4	18p-Del	0.00123	1
PTCH1	Amp_20q11.21	0.00126	1
RB1	Amp_20q11.21	0.00126	1
PTCH1	Del_17p12	0.00129	1
BCL9	20q-Amp	0.0013	1
SOX9	Del_22q13.32	0.00131	1
B2M	Del_18q21.2	0.00131	1
FBXW7	18p-Del	0.00131	1
RBPJ	Del_18q21.2	0.00131	1
GMPS	Del_18q21.2	0.00131	1
NF2	Del_18q21.2	0.00132	1
PTCH1	Amp_20p11.21	0.00132	1
RB1	20q-Amp	0.00133	1
TP53	12q-Amp	0.00134	1
MVK	13q-Amp	0.00134	1
RB1	Del_18q22.1	0.00134	1
PTCH1	20p-Amp	0.00136	1
BCORL1	Del_18q21.2	0.00136	1
SLC12A6	Del_18q21.2	0.00136	1
PTEN	Del_18q12.2	0.00137	1
C11orf30	Del_18p11.31	0.00143	1
C11orf30	Del_18q21.2	0.00143	1
RBBP7	Amp_20q13.12	0.00144	1
FBXW7	14q-Del	0.00146	1
MPHOSPH10	Del_17p12	0.00146	1
BMPR2	Del_14q11.2	0.00147	1
GMPS	17p-Del	0.00147	1
KDM6A	Del_18q12.2	0.00148	1
SLC26A8	13q-Amp	0.00154	1
ALDH1A3	13q-Amp	0.00154	1
B2M	Del_18q22.1	0.00155	1
RBPJ	Del_18q22.1	0.00155	1
GMPS	Del_18q22.1	0.00155	1
MLH1	18p-Del	0.00156	1
RNF43	Del_14q11.2	0.00158	1
RNF43	Del_15q21.1	0.00158	1
NF2	Del_15q22.33	0.00158	1
ARID1A	Del_18q21.2	0.00159	1
RNF43	8p-Del	0.00159	1
FBXW7	Del_18p11.31	0.00159	1
MAP4K3	20q-Amp	0.00159	1
BMPR2	Del_15q15.2	0.00161	1
PRKDC	Del_17p12	0.00165	1
SOX9	Amp_20q12	0.00166	1
PRKDC	Amp_13q12.13	0.00167	1
BCORL1	Del_18q22.1	0.00167	1
SLC12A6	Del_18q22.1	0.00167	1
TPRKB	Amp_20q12	0.00168	1
MAPK6	18q-Del	0.00169	1
SLC26A8	18q-Del	0.00169	1
FKBP9	18q-Del	0.00169	1
MGA	17p-Del	0.0017	1
ROS1	Del_18q22.1	0.0017	1
SLC26A8	Amp_20q13.12	0.0017	1
CDH1	20q-Amp	0.00171	1
PTEN	18q-Del	0.00172	1
ALPK2	Amp_20p11.21	0.00173	1
C11orf30	Del_18q22.1	0.00173	1
FMN2	Amp_20q13.12	0.00175	1
RNF43	Del_15q15.2	0.00176	1
FMN2	Amp_20q11.21	0.00176	1
ARID1A	22q-Del	0.00179	1
B2M	Amp_20p11.21	0.00179	1
HLA-A	18p-Del	0.00179	1
SETD2	Amp_20p12.1	0.00179	1
SETD2	Del_18p11.31	0.00179	1
EGR1	Amp_20q13.12	0.00182	1
MPHOSPH10	Del_18p11.31	0.00182	1
RB1	Del_18q12.2	0.00185	1
MVK	20p-Amp	0.00186	1
MVK	Del_8p23.2	0.00186	1
P2RY13	Amp_20q12	0.00187	1
GPATCH8	Amp_20q12	0.00187	1
ATM	18q-Del	0.00187	1
KDM6A	Amp_13q22.1	0.0019	1
PRKDC	13q-Amp	0.00192	1
CDK12	20q-Amp	0.00196	1
ZBTB20	18p-Del	0.00197	1
MAP4K3	Amp_20p11.21	0.00197	1
ACVR1B	17p-Del	0.00198	1
ROS1	20q-Amp	0.00199	1
PRKDC	Amp_20p12.1	0.002	1
FAM123B	20q-Amp	0.00202	1
MGA	Amp_13q12.13	0.00202	1
KDM6A	Del_18q21.2	0.00202	1
20p-Del	Amp_20p12.1	0.00205	1
ALPK2	Amp_13q12.13	0.00206	1
ZBTB20	Del_18q12.2	0.00207	1
RB1	Amp_20q12	0.0021	1
PTCH1	Amp_20q13.12	0.00215	1
ROS1	18q-Del	0.00215	1
BCOR	Del_18p11.31	0.00216	1
TPRKB	Amp_20q11.21	0.00218	1
DDX26B	17p-Del	0.00218	1
L1TD1	Amp_20q11.21	0.0022	1
CREBBP	8p-Del	0.00223	1
BCOR	Amp_13q12.13	0.00224	1
NF2	18p-Del	0.00224	1
PRKDC	18p-Del	0.00224	1
ROS1	Del_18q12.2	0.00225	1
TOP2B	Del_18q12.2	0.00227	1
FKBP9	20p-Amp	0.00227	1
RBPJ	Del_17p12	0.00232	1
ARID1A	Del_18q22.1	0.00236	1
CHUK	Amp_13q12.13	0.00238	1
ACVR1B	Amp_20q12	0.0024	1
ROS1	Del_14q11.2	0.00242	1
PRKDC	Del_15q11.2	0.00243	1
ST3GAL6	Del_17p12	0.00243	1
RBBP7	Amp_20q12	0.00243	1
ATM	Del_18q21.2	0.00244	1
PRRG1	Amp_20q13.12	0.00245	1
SLC26A8	Del_18q21.2	0.00247	1
ACVR1B	18p-Del	0.0025	1
CDK12	20p-Amp	0.00251	1
FBXW7	Del_14q11.2	0.00253	1
PTCH1	Amp_20p12.1	0.00253	1
ALPK2	17p-Del	0.00257	1
L1TD1	Amp_13q12.2	0.00259	1
ASXL1	18q-Del	0.00262	1
PRKDC	Del_18p11.31	0.00263	1
ZBTB20	Del_17p12	0.00263	1
CDK12	Amp_20q12	0.00264	1
LARP4B	Del_8p22	0.00267	1
TPRKB	20q-Amp	0.00269	1
SLC12A6	Del_8p22	0.00274	1
BMPR2	14q-Del	0.00276	1
MAPK6	Amp_13q12.13	0.00279	1
EGR1	Amp_20q12	0.00279	1
SLC26A8	Amp_13q12.13	0.00279	1
RB1	18p-Del	0.00282	1
ATM	Amp_13q22.1	0.00282	1
HLA-A	Del_18p11.31	0.00285	1
GMPS	Del_18p11.31	0.00285	1
Amp_20p11.21	Del_6q26	0.00286	1
TP53	ACVR1B	0.00287	1
DDX26B	Amp_20p11.21	0.00288	1
RBPJ	Del_18q12.2	0.00291	1
GPATCH8	Amp_13q12.13	0.00291	1
GMPS	Del_18q12.2	0.00291	1
SLC26A8	Del_18q22.1	0.00292	1
SETD2	Amp_13q12.13	0.00293	1
ARID1A	Del_1p36.11	0.00294	1
PRKDC	20q-Amp	0.00296	1
L1TD1	7p-Amp	0.00301	1
PTCH1	Del_6q26	0.00302	1
L1TD1	Amp_20p11.21	0.00306	1
CDK12	Del_1p36.11	0.0031	1
RNF43	Del_5q21.2	0.00311	1
FBXW7	Del_17p12	0.00313	1
RNF43	7p-Amp	0.00317	1
FAM123B	Amp_11p15.5	0.00318	1
MGA	Del_15q21.1	0.00319	1
NF2	15q-Del	0.0032	1
GPATCH8	17p-Del	0.00322	1
ST3GAL6	Del_8p22	0.00323	1
ASXL1	Del_18q12.2	0.00324	1
ATM	18p-Del	0.00326	1
RB1	18q-Del	0.00332	1
P2RY13	20q-Amp	0.00333	1
GPATCH8	20q-Amp	0.00333	1
RNF43	14q-Del	0.00336	1
NF1	Amp_20q12	0.00336	1
RBBP7	Amp_20q11.21	0.00339	1
L1TD1	Del_18q12.2	0.00339	1
ZBTB20	17p-Del	0.0034	1
CHUK	Amp_13q22.1	0.00341	1
ROS1	Del_17p12	0.00341	1
ACVR1B	Del_17p12	0.00349	1
BMPR2	Del_8p23.2	0.00349	1
MGA	Del_15q15.2	0.00352	1
ST3GAL6	Del_18q21.2	0.00356	1
RNF43	7q-Amp	0.00362	1
CHUK	Amp_13q12.2	0.00362	1
C11orf30	Del_18q12.2	0.00363	1
B2M	13q-Amp	0.00365	1
ROS1	Amp_13q22.1	0.00367	1
DDX26B	Del_17p12	0.00367	1
EGR1	Amp_20q11.21	0.00368	1
BCORL1	Del_18q12.2	0.00368	1
SLC12A6	Del_18q12.2	0.00368	1
ACVR1B	Amp_20q11.21	0.00369	1
MGA	Amp_13q12.2	0.00369	1
SETD2	Del_17p12	0.00377	1
CDK12	Del_18q21.2	0.00381	1
MAPK6	Amp_13q22.1	0.00384	1
FKBP9	Amp_13q22.1	0.00384	1
ALPK2	Amp_13q12.2	0.00385	1
GPATCH8	Amp_13q22.1	0.00385	1
PRRG1	Amp_20q12	0.00386	1
PTEN	Amp_17q12	0.00388	1
CDH1	Del_17p12	0.00393	1
FBXW7	Del_18q22.1	0.00395	1
TOP2B	18q-Del	0.00395	1
CREBBP	7p-Amp	0.004	1
FAM123B	Amp_20p11.21	0.00402	1
GPATCH8	Amp_13q12.2	0.00403	1
CDK12	Amp_20q13.12	0.00403	1
ST3GAL6	Del_18q22.1	0.00404	1
MAPK6	Amp_13q12.2	0.00405	1
FBXW7	4q-Del	0.00414	1
STARD3NL	Del_18q21.2	0.00415	1
DCLK2	Del_18q21.2	0.00415	1
ALDH1A3	Amp_20q11.21	0.00415	1
Amp_20q13.12	Del_16q23.1	0.00415	1
CDK12	Amp_20q11.21	0.00417	1
BCORL1	Amp_13q22.1	0.00427	1
HLA-A	Amp_20p12.1	0.00429	1
C11orf30	18p-Del	0.00431	1
ATM	Del_18q22.1	0.00431	1
ERBB2	Amp_20p12.1	0.00436	1
SOX9	20q-Amp	0.00439	1
TOP2B	Del_18q22.1	0.0044	1
BCOR	18p-Del	0.00447	1
LARP4B	Amp_20p11.21	0.00447	1
FBXW7	Del_18q21.2	0.00448	1
BCOR	Del_1p36.11	0.00451	1
Amp_12p13.33	Del_1p33	0.00451	1
BCL9	7q-Amp	0.00452	1
ACVR1B	Del_18p11.31	0.00453	1
RBPJ	18q-Del	0.00457	1
HLA-A	18q-Del	0.00457	1
GMPS	18q-Del	0.00457	1
EGR1	20q-Amp	0.00458	1
ST3GAL6	Del_8p23.2	0.00464	1
FMN2	7q-Amp	0.00469	1
NLRC4	20q-Amp	0.00472	1
MAPK6	18p-Del	0.00473	1
SLC26A8	18p-Del	0.00473	1
SLC26A8	Amp_20p11.21	0.00473	1
FKBP9	18p-Del	0.00473	1
FKBP9	Amp_20p11.21	0.00473	1
MVK	17p-Del	0.00475	1
STARD3NL	Del_18q22.1	0.00477	1
DCLK2	Del_18q22.1	0.00477	1
PRKDC	Del_15q22.33	0.00479	1
SLC12A6	Del_8p23.2	0.00484	1
TOP2B	Del_18p11.31	0.00491	1
NF2	Amp_20q13.12	0.00493	1
ARID1A	Del_18q12.2	0.00496	1
BCL9	7p-Amp	0.00507	1
DDX26B	Del_8p22	0.0051	1
SETD2	Del_21q11.2	0.0051	1
ALPK2	Amp_20p12.1	0.00512	1
RNF43	Del_15q22.33	0.00513	1
B2M	20p-Amp	0.00514	1
RBPJ	20p-Amp	0.00514	1
PRRG1	Amp_20q11.21	0.00515	1
PTEN	Del_17p12	0.00518	1
ARID1A	Amp_16p11.2	0.00519	1
PRKDC	Amp_20p11.21	0.00519	1
ACVR1B	20q-Amp	0.0052	1
MGA	13q-Amp	0.0052	1
GRB2	Del_8p22	0.00525	1
FBXW7	18q-Del	0.00534	1
ROS1	18p-Del	0.00535	1
12p-Amp	22q-Del	0.00535	1
ROS1	14q-Del	0.00544	1
BCORL1	Amp_20p11.21	0.00546	1
SLC12A6	18p-Del	0.00546	1
SLC12A6	Amp_20p11.21	0.00546	1
L1TD1	18q-Del	0.00551	1
ALDH1A3	Del_18q12.2	0.00552	1
12q-Amp	14q-Del	0.00556	1
NF2	Amp_20q11.21	0.00559	1
TPRKB	Amp_20p11.21	0.00564	1
ATM	22q-Del	0.00568	1
CDK12	13q-Amp	0.00569	1
MLH1	Del_18q22.1	0.0057	1
ASXL1	Amp_13q12.13	0.0057	1
12q-Amp	Del_18p11.31	0.00571	1
L1TD1	Del_8p22	0.00582	1
TOP2B	Del_8p22	0.00584	1
NF2	Del_18p11.31	0.00594	1
CREBBP	Amp_17q12	0.00594	1
RSPH3	Amp_20q12	0.00597	1
FBXW7	20p-Amp	0.00607	1
ROS1	20p-Amp	0.00607	1
SOX9	22q-Del	0.0061	1
SOX9	Del_4p16.1	0.0061	1
C11orf30	18q-Del	0.0061	1
FKBP9	Del_17p12	0.0061	1
BMPR2	15q-Del	0.00611	1
RNF43	4p-Del	0.00621	1
NF2	Amp_20q12	0.00621	1
SLC12A6	Del_15q11.2	0.00635	1
BCORL1	18q-Del	0.0064	1
SLC12A6	18q-Del	0.0064	1
L1TD1	13q-Amp	0.00645	1
SMAD2	18p-Del	0.00646	1
PTCH1	Del_17q24.3	0.00646	1
PRRG1	20q-Amp	0.00649	1
ST3GAL6	Del_18q12.2	0.00655	1
FAM9A	Del_18q21.2	0.00657	1
ATM	Del_4q22.1	0.00658	1
SOX9	Amp_8q24.21	0.00662	1
L1TD1	Del_18q21.2	0.00664	1
NEXN	Del_18q21.2	0.00664	1
FMN2	Del_10q25.2	0.00666	1
GMPS	Amp_20q13.12	0.00671	1
PIK3R1	Del_1p36.11	0.00672	1
SETD2	18p-Del	0.00679	1
SLC26A8	17p-Del	0.00681	1
ALDH1A3	17p-Del	0.00681	1
STARD3NL	Del_18p11.31	0.00688	1
SETD2	Del_15q22.33	0.00689	1
RNF43	Amp_17q12	0.00696	1
RNF43	Del_4q22.1	0.007	1
B2M	Amp_13q12.13	0.00702	1
HLA-A	Amp_13q12.13	0.00702	1
ALDH1A3	Amp_20q13.12	0.00713	1
LARP4B	Del_21q11.2	0.00713	1
SOX9	Amp_13q12.2	0.00714	1
HLA-A	Del_18q21.2	0.00716	1
Amp_12p13.33	Del_15q11.2	0.00717	1
14q-Del	Amp_12p13.33	0.00734	1
FAM9A	Del_18q22.1	0.00735	1
SLC12A6	Del_17p12	0.00736	1
ASXL1	Amp_20q13.12	0.00739	1
SLC26A8	Del_18p11.31	0.00744	1
FKBP9	Del_18p11.31	0.00744	1
SOX9	Amp_20q11.21	0.00746	1
FAM123B	Amp_17q24.1	0.0075	1
ASXL1	Del_17p12	0.00751	1
SOX9	Del_18q12.2	0.00752	1
RSPH3	Amp_20q11.21	0.00761	1
PRKDC	Del_5q12.1	0.00763	1
Amp_20q12	Del_16q23.1	0.00764	1
ASXL1	Del_18q22.1	0.00766	1
PRKDC	17p-Del	0.00768	1
DDX26B	Del_8p23.2	0.00768	1
L1TD1	Del_18q22.1	0.00776	1
DIP2B	Del_18q12.2	0.00777	1
SOX9	Del_18q22.1	0.00778	1
ALPK2	Amp_17q12	0.00778	1
ZBTB20	Amp_13q22.1	0.00783	1
PCBP1	Del_8p22	0.00783	1
FYN	Del_8p22	0.00783	1
MAP4K3	Amp_13q22.1	0.00783	1
ATM	1p-Del	0.00794	1
KDM6A	Amp_20p12.1	0.00801	1
NF1	Amp_20q11.21	0.00803	1
CREBBP	Amp_20p12.1	0.00806	1
STARD3NL	Del_18q12.2	0.00816	1
DCLK2	Del_18q12.2	0.00816	1
BIRC3	Del_18q12.2	0.00816	1
HLA-A	Del_18q22.1	0.00825	1
SLC12A6	Del_15q21.1	0.0083	1
DDX26B	Amp_8q24.21	0.00839	1
ZBTB20	8p-Del	0.00843	1
GPATCH8	13q-Amp	0.00853	1
C11orf30	7q-Amp	0.00858	1
SLC26A8	Del_8p22	0.00862	1
ALDH1A3	Del_8p22	0.00862	1
FBXW7	Del_4p16.1	0.00863	1
CREBBP	Amp_8q24.21	0.00864	1
WNT1	Del_18q21.2	0.00865	1
L1TD1	Amp_13q12.13	0.00874	1
PTEN	21q-Del	0.00874	1
TP53	12p-Amp	0.00877	1
CTNNB1	20p-Amp	0.00878	1
PTEN	Amp_20p12.1	0.00882	1
CREBBP	Amp_20p11.21	0.00886	1
SLC12A6	Del_15q15.2	0.00887	1
MPHOSPH10	Del_18q12.2	0.00888	1
DIP2B	Del_18q21.2	0.00898	1
PTEN	Del_18q21.2	0.00902	1
CDK12	Del_8p23.2	0.00905	1
CDH1	Amp_20q13.12	0.00911	1
ATM	Del_18p11.31	0.00916	1
FBXW7	Del_1p36.11	0.00919	1
L1TD1	Del_8p23.2	0.00919	1
MGA	Del_15q22.33	0.00922	1
NF1	Del_21q11.2	0.00924	1
ST3GAL6	18q-Del	0.00925	1
ALPK2	Amp_13q22.1	0.00925	1
B2M	Amp_13q22.1	0.00926	1
HLA-A	Amp_13q22.1	0.00926	1
SETD2	Del_4q22.1	0.00926	1
NLRC4	Del_18p11.31	0.00928	1
SLC12A6	Del_18p11.31	0.00928	1
PRKDC	15q-Del	0.00932	1
PTCH1	13q-Amp	0.00936	1
CHUK	13q-Amp	0.0094	1
SOX9	13q-Amp	0.00942	1
WNT1	Del_18q22.1	0.00942	1
NF2	20q-Amp	0.00943	1
TP53	NR1H3	0.00945	1
MLH1	Del_18p11.31	0.00947	1
MAPK6	13q-Amp	0.00949	1
FKBP9	13q-Amp	0.00949	1
SMAD2	Del_18q21.2	0.00951	1
ARID1A	Del_22q13.32	0.00954	1
ARID1A	20p-Amp	0.00963	1
PRKDC	Del_8p23.2	0.00963	1
LARP4B	Del_4q35.1	0.00963	1
B2M	Amp_13q12.2	0.00968	1
TOP2B	Del_8p23.2	0.00968	1
HLA-A	Amp_13q12.2	0.00968	1
ATM	Amp_13q12.13	0.00969	1
12p-Amp	Del_22q13.32	0.00972	1
RNF43	Del_5q12.1	0.00978	1
TP53	FAM9A	0.0098	1
TP53	ZNF486	0.00981	1
BCOR	8q-Amp	0.00982	1
DIP2B	7p-Amp	0.00982	1
NF1	21q-Del	0.00983	1
DDX26B	7p-Amp	0.00985	1
8p-Amp	Del_1p13.2	0.00989	1
CHUK	17p-Del	0.0099	1
TP53	BCL9	0.0101	1
CDK12	Del_17p12	0.0101	1
ZNF486	Amp_20q11.21	0.0101	1
SETD2	Del_21q21.1	0.0102	1
ST3GAL6	17p-Del	0.0103	1
12q-Amp	18p-Del	0.0103	1
SMAD2	Del_18p11.31	0.0104	1
ALPK2	Del_8p23.2	0.0104	1
ASXL1	20p-Amp	0.0104	1
RNF43	Del_5q22.2	0.0105	1
CDK12	Del_18q12.2	0.0105	1
GMPS	Amp_20q12	0.0105	1
FMN2	Amp_20p12.1	0.0106	1
FBXW7	Del_5q21.2	0.0106	1
ZBTB20	Amp_20p12.1	0.0106	1
CREBBP	Amp_11p15.5	0.0107	1
FBXW7	Del_4q35.1	0.0108	1
ST3GAL6	Amp_20q13.12	0.0108	1
ALPK2	Del_5q12.1	0.0108	1
NLRC4	Amp_20q11.21	0.0108	1
DIP2B	Del_18q22.1	0.0108	1
TOP2B	Amp_8q24.21	0.0108	1
RNF43	4q-Del	0.0109	1
BCL9	Del_8p22	0.011	1
BCORL1	Del_8p22	0.011	1
B2M	18p-Del	0.0111	1
C11orf30	7p-Amp	0.0111	1
RBPJ	18p-Del	0.0111	1
GMPS	18p-Del	0.0111	1
PRPS1	Del_17p12	0.0111	1
LARP4B	Del_4q22.1	0.0112	1
12q-Amp	15q-Del	0.0112	1
Amp_20q11.21	Del_16q23.1	0.0112	1
SETD2	15q-Del	0.0113	1
ATM	Del_8q11.1	0.0113	1
NF1	Del_21q21.1	0.0114	1
MVK	Amp_20p12.1	0.0114	1
PCBP1	Del_8p23.2	0.0114	1
FYN	Del_8p23.2	0.0114	1
ALDH1A3	Amp_20q12	0.0114	1
GPATCH8	20p-Amp	0.0114	1
MGA	Del_15q11.2	0.0115	1
TPRKB	20p-Amp	0.0115	1
KDM6A	Del_22q13.32	0.0115	1
TOP2B	18p-Del	0.0116	1
RB1	Amp_11p15.5	0.0117	1
L1TD1	Amp_13q22.1	0.0117	1
CTNNB1	20q-Amp	0.0117	1
ARID1A	17p-Del	0.0118	1
DIP2B	Amp_20q13.12	0.0118	1
STARD3NL	18q-Del	0.0119	1
ROS1	Del_18p11.31	0.0119	1
DCLK2	18q-Del	0.0119	1
CDK12	Amp_20p12.1	0.0119	1
BIRC3	18q-Del	0.0119	1
CTNNB1	Amp_13q22.1	0.012	1
SMAD2	Del_8p22	0.0121	1
LARP4B	Del_21q21.1	0.0121	1
SOX9	4p-Del	0.0123	1
PTCH1	17p-Del	0.0123	1
BCORL1	13q-Amp	0.0123	1
KDM6A	Amp_20q13.12	0.0123	1
12q-Amp	Del_8p23.2	0.0123	1
ACVR1B	Del_15q22.33	0.0124	1
MLH1	20p-Amp	0.0124	1
FMN2	7p-Amp	0.0124	1
PCBP1	Amp_8q24.21	0.0124	1
BMPR2	7p-Amp	0.0124	1
KDM6A	Del_15q22.33	0.0124	1
CDH1	20p-Amp	0.0125	1
CHUK	Amp_20q12	0.0125	1
BMPR2	Del_15q21.1	0.0125	1
SETD2	Amp_13q22.1	0.0125	1
NF2	Del_15q11.2	0.0126	1
NLRC4	Amp_20q13.12	0.0127	1
SOX9	Del_17p12	0.0128	1
ST3GAL6	Amp_13q12.13	0.0129	1
WNT1	Del_18q12.2	0.0131	1
TOP2B	Amp_20q13.12	0.0131	1
CREBBP	14q-Del	0.0131	1
7q-Amp	Del_10q21.1	0.0131	1
SLC26A8	20p-Amp	0.0132	1
SLC26A8	Del_8p23.2	0.0132	1
ALDH1A3	Del_8p23.2	0.0132	1
SLC12A6	14q-Del	0.0132	1
PRKDC	Del_15q21.1	0.0133	1
FKBP9	Amp_13q12.13	0.0133	1
BMPR2	22q-Del	0.0133	1
SOX9	Del_4q35.1	0.0134	1
SETD2	Amp_13q12.2	0.0134	1
DIP2B	18q-Del	0.0135	1
RBPJ	17p-Del	0.0135	1
CDK12	Del_18q22.1	0.0135	1
12p-Amp	Del_15q11.2	0.0135	1
20q-Amp	Del_6q26	0.0135	1
ARID1A	18q-Del	0.0136	1
CDH1	Amp_20q12	0.0137	1
SMAD4	20p-Del	0.0137	1
B2M	Del_17p12	0.0138	1
ACVR1B	8p-Del	0.0138	1
RBBP7	Del_17p12	0.0138	1
GMPS	Del_17p12	0.0138	1
NEXN	Del_18q12.2	0.014	1
GMPS	Amp_20q11.21	0.014	1
ARID1A	Del_8p22	0.0142	1
DDX26B	Amp_13q22.1	0.0142	1
HLA-A	Del_18q12.2	0.0142	1
FAM123B	Amp_13q22.1	0.0144	1
MLH1	Amp_13q22.1	0.0144	1
TP53	SOX9	0.0145	1
SOX9	18q-Del	0.0145	1
FAM123B	Amp_17q12	0.0146	1
FAM123B	Del_17p12	0.0146	1
BMPR2	Del_1p36.11	0.0146	1
PRKDC	Del_22q13.32	0.0147	1
MGA	15q-Del	0.0147	1
PIK3R1	Del_1p33	0.0147	1
FBXW7	Amp_19q12	0.0148	1
DDX26B	Amp_13q12.2	0.0148	1
WNT1	Amp_20q13.12	0.0149	1
PRKDC	Del_15q15.2	0.015	1
MAP4K3	Del_18q21.2	0.015	1
BCOR	Del_5q22.2	0.0151	1
ALPK2	13q-Amp	0.0151	1
TOP2B	Del_17p12	0.0151	1
20q-Amp	Del_16q23.1	0.0151	1
SOX9	Del_18q21.2	0.0152	1
MLH1	9p-Amp	0.0152	1
NF1	Del_15q21.1	0.0152	1
FBXW7	Del_15q11.2	0.0153	1
ROS1	Del_8p22	0.0153	1
ATM	Amp_17q12	0.0153	1
ASXL1	Amp_20q12	0.0154	1
FAM9A	18q-Del	0.0155	1
NF1	20q-Amp	0.0155	1
ST3GAL6	Amp_20q12	0.0155	1
APC	Del_16q23.1	0.0158	1
PTEN	Del_18q22.1	0.0158	1
ST3GAL6	Amp_13q22.1	0.016	1
PLEKHF2	Amp_13q22.1	0.016	1
ROS1	17p-Del	0.016	1
CDH1	9p-Amp	0.0161	1
PIK3R1	20q-Amp	0.0161	1
KDM6A	Amp_13q12.13	0.0161	1
NF2	Amp_13q22.1	0.0162	1
L1TD1	7q-Amp	0.0162	1
BCL9	Del_18q21.2	0.0163	1
ZNF486	Del_18p11.31	0.0163	1
B2M	Del_18p11.31	0.0164	1
MGA	Amp_11p15.5	0.0164	1
BCL9	17p-Del	0.0164	1
RBPJ	Del_18p11.31	0.0164	1
ATM	17p-Del	0.0164	1
Amp_11p15.5	Del_5q12.1	0.0164	1
ST3GAL6	Amp_13q12.2	0.0165	1
ASXL1	20q-Amp	0.0165	1
LARP4B	20p-Amp	0.0166	1
CDK12	Amp_13q22.1	0.0166	1
WNT1	18q-Del	0.0167	1
NF2	Del_21q11.2	0.0167	1
CREBBP	Amp_8p11.21	0.0167	1
12p-Amp	15q-Del	0.0167	1
FBXW7	Amp_1q31.1	0.0168	1
ALPK2	Del_10q23.31	0.0168	1
SOX9	Amp_13q22.1	0.0169	1
PTCH1	Del_8q11.1	0.017	1
PRRG1	20p-Amp	0.017	1
RB1	Del_8q11.1	0.017	1
PLAGL2	Del_18q21.2	0.0171	1
SLC12A6	Del_15q22.33	0.0171	1
MAP4K3	Del_15q11.2	0.0172	1
ATM	Del_15q22.33	0.0172	1
PRKDC	Del_8p22	0.0173	1
NF1	Del_18q12.2	0.0173	1
CHUK	Amp_20q11.21	0.0173	1
SMAD4	Del_17p12	0.0173	1
MAP4K3	Del_18q22.1	0.0173	1
CREBBP	Del_14q11.2	0.0173	1
ACVR1B	15q-Del	0.0175	1
RB1	Del_18p11.31	0.0175	1
GMPS	20q-Amp	0.0175	1
KDM6A	15q-Del	0.0175	1
8p-Amp	Del_1p33	0.0175	1
CDK12	Amp_13q12.2	0.0176	1
NF1	Del_15q15.2	0.0177	1
MVK	7p-Amp	0.0177	1
L1TD1	Del_17p12	0.0179	1
BCL9	20p-Amp	0.018	1
BCL9	Del_8p23.2	0.018	1
NLRC4	20p-Amp	0.018	1
ROS1	13q-Amp	0.018	1
BCORL1	20p-Amp	0.018	1
BCORL1	Del_8p23.2	0.018	1
FAM123B	Amp_13q12.13	0.0181	1
RHOA	Del_8p22	0.0182	1
SLC26A8	Amp_13q12.2	0.0182	1
FKBP9	Amp_13q12.2	0.0182	1
CDK12	18q-Del	0.0182	1
EGR1	18p-Del	0.0183	1
ST3GAL6	18p-Del	0.0183	1
PLEKHF2	18p-Del	0.0183	1
PIK3R1	Amp_8p11.21	0.0183	1
ARID1A	9p-Amp	0.0184	1
ARID1A	Amp_13q22.1	0.0184	1
ARID1A	Del_10q21.1	0.0184	1
ACVR1B	Del_8p22	0.0184	1
FMN2	Del_4p16.1	0.0184	1
12q-Amp	Del_15q11.2	0.0184	1
ARID1A	Amp_13q12.13	0.0185	1
CRIPAK	Amp_20q11.21	0.0185	1
ZBTB20	7p-Amp	0.0185	1
PLAGL2	Del_18q22.1	0.0185	1
MAP4K3	7p-Amp	0.0185	1
B2M	Del_8p22	0.0186	1
BCORL1	18p-Del	0.0186	1
GMPS	Del_8p22	0.0186	1
NF2	Amp_13q12.13	0.0187	1
NF1	Del_15q11.2	0.0188	1
ARID1A	Del_8p23.2	0.0189	1
SMAD2	Del_8p23.2	0.0189	1
ZBTB20	13q-Amp	0.019	1
PRRG1	18q-Del	0.019	1
RB1	Amp_5p12	0.019	1
MAP4K3	13q-Amp	0.019	1
RNF43	Del_1p33	0.0192	1
BCL9	Del_18q22.1	0.0192	1
WNT1	Amp_20q12	0.0193	1
CREBBP	Del_15q15.2	0.0193	1
ST3GAL6	Amp_20q11.21	0.0194	1
MAPK6	20q-Amp	0.0195	1
PTCH1	Amp_13q12.13	0.0195	1
C2orf29	20q-Amp	0.0195	1
ALDH1A3	20q-Amp	0.0195	1
NF1	Amp_20q13.12	0.0196	1
CHUK	Del_18q21.2	0.0196	1
SETD2	13q-Amp	0.0196	1
SMAD2	Amp_13q22.1	0.0197	1
NF2	Del_15q21.1	0.0197	1
RB1	Del_17p12	0.0197	1
SMAD2	Del_1p36.11	0.0198	1
P2RY13	Del_18q21.2	0.0198	1
NR1H3	Del_18q21.2	0.0198	1
RLIM	Del_18q22.1	0.0199	1
MPHOSPH10	Amp_13q12.13	0.0199	1
SOX9	Del_1p13.2	0.02	1
BCL9	Amp_8q24.21	0.02	1
FKBP9	7q-Amp	0.02	1
Amp_11p15.5	Del_5q23.3	0.02	1
SMAD2	Del_18q12.2	0.0202	1
HLA-A	13q-Amp	0.0202	1
ARID1A	Amp_13q12.2	0.0203	1
TP53	Amp_11p15.5	0.0203	1
FBXW7	Del_17q24.3	0.0204	1
SETD2	7q-Amp	0.0204	1
ATM	13q-Amp	0.0205	1
DIP2B	Amp_20q12	0.0206	1
BCORL1	8p-Del	0.0206	1
SLC12A6	8p-Del	0.0206	1
SMAD2	Amp_13q12.2	0.0207	1
PTEN	Del_4q22.1	0.0207	1
ALDH1A3	Amp_20p11.21	0.0208	1
CREBBP	Del_15q22.33	0.0209	1
15q-Del	Amp_12p13.33	0.0209	1
FBXW7	Del_10q25.2	0.021	1
ROS1	Amp_13q12.2	0.021	1
L1TD1	Del_15q11.2	0.021	1
CDK12	Del_5q21.2	0.021	1
NEXN	Amp_20q12	0.021	1
KDM6A	Amp_20q12	0.021	1
MLH1	Del_5q12.1	0.0211	1
WNT1	Amp_13q12.13	0.0211	1
ALG12	Amp_13q12.13	0.0211	1
12q-Amp	Del_8p22	0.0211	1
RNF43	22q-Del	0.0212	1
RNF43	Del_4p16.1	0.0212	1
NEXN	18q-Del	0.0212	1
B2M	8p-Del	0.0213	1
NF1	Del_18q22.1	0.0213	1
ZBTB20	Del_14q11.2	0.0213	1
NLRC4	Amp_20q12	0.0213	1
C11orf30	Del_17p12	0.0213	1
MAP4K3	Del_15q21.1	0.0213	1
RNF43	Amp_17q24.1	0.0214	1
TOP2B	Amp_20q12	0.0214	1
NEXN	Del_18p11.31	0.0214	1
EGR1	Del_18q21.2	0.0216	1
ZBTB20	Amp_13q12.13	0.0216	1
PLEKHF2	Del_18q21.2	0.0216	1
ASXL1	Amp_13q22.1	0.0216	1
MAP4K3	Amp_13q12.13	0.0216	1
BIRC3	Amp_13q22.1	0.0216	1
RB1	20p-Amp	0.0217	1
ARID1A	Del_10q23.31	0.0218	1
EGR1	Del_17p12	0.0218	1
SOX9	Del_14q11.2	0.0219	1
CTNNB1	Amp_20p12.1	0.0219	1
RHOA	Del_18q12.2	0.022	1
CHUK	14q-Del	0.022	1
PTCH1	Amp_13q22.1	0.022	1
RSPH3	Amp_20q13.12	0.022	1
NLRC4	Del_21q21.1	0.0221	1
12q-Amp	22q-Del	0.0221	1
RNF43	Del_22q13.32	0.0222	1
P2RY13	Del_18q22.1	0.0222	1
CHUK	20q-Amp	0.0223	1
MGA	Del_10q23.31	0.0223	1
Amp_8p11.21	Del_3p26.3	0.0224	1
CHUK	Amp_20q13.12	0.0225	1
TOP2B	Amp_13q12.13	0.0225	1
MAP4K3	Del_15q15.2	0.0225	1
RNF43	Amp_8q24.21	0.0227	1
CHUK	Del_18q22.1	0.0227	1
FBXW7	Del_18q12.2	0.0228	1
WNT1	Amp_20q11.21	0.0229	1
ASXL1	Amp_13q12.2	0.0232	1
ROS1	Del_21q11.2	0.0232	1
ST3GAL6	20q-Amp	0.0233	1
ALPK2	Amp_17q24.1	0.0234	1
ASXL1	Amp_17q24.1	0.0234	1
ACVR1B	Amp_13q12.2	0.0235	1
ATM	Del_19p13.3	0.0235	1
ZNF486	Amp_20q13.12	0.0235	1
KDM6A	Amp_13q12.2	0.0235	1
PRKDC	Del_4q22.1	0.0236	1
BCORL1	Amp_12p13.33	0.0236	1
SLC12A6	15q-Del	0.0236	1
ZBTB20	Del_1p36.11	0.0237	1
KDM6A	Del_18q22.1	0.0237	1
FBXW7	Del_19p13.3	0.0238	1
MAPK6	Amp_20q13.12	0.0239	1
EGR1	Del_18q22.1	0.0239	1
PLEKHF2	Del_18q22.1	0.0239	1
C2orf29	Amp_20q13.12	0.0239	1
NF1	Del_4q22.1	0.024	1
BCL9	Del_17p12	0.024	1
PTEN	Del_17q24.3	0.024	1
BCORL1	Del_17p12	0.024	1
12q-Amp	Del_14q11.2	0.0241	1
12q-Amp	Del_15q21.1	0.0241	1
STARD3NL	Amp_20q13.12	0.0242	1
ASXL1	Amp_20q11.21	0.0242	1
ASXL1	Del_18p11.31	0.0242	1
FYN	Amp_20q13.12	0.0242	1
BIRC3	Amp_20q13.12	0.0242	1
ARID1A	Del_17p12	0.0245	1
WNT1	Amp_13q22.1	0.0245	1
PTCH1	Amp_13q12.2	0.0245	1
PLAGL2	Del_18q12.2	0.0245	1
CRIPAK	20q-Amp	0.0246	1
PRKDC	Del_10q25.2	0.0247	1
L1TD1	17p-Del	0.0247	1
CDH1	21q-Del	0.0249	1
EGR1	Del_18p11.31	0.0249	1
ST3GAL6	Del_18p11.31	0.0249	1
PLEKHF2	Del_18p11.31	0.0249	1
NLRC4	8q-Amp	0.0249	1
SLC12A6	7p-Amp	0.0249	1
RHOA	Del_8p23.2	0.025	1
IQCD	20p-Amp	0.025	1
WNT1	Amp_13q12.2	0.0251	1
ALG12	Amp_13q12.2	0.0251	1
STARD3NL	18p-Del	0.0252	1
STARD3NL	Amp_20p11.21	0.0252	1
P2RY13	Amp_20p11.21	0.0252	1
ROS1	Amp_13q12.13	0.0252	1
DCLK2	18p-Del	0.0252	1
GPATCH8	Amp_20p11.21	0.0252	1
NF1	Del_18q21.2	0.0254	1
MAPK6	Del_15q11.2	0.0256	1
FBXW7	Amp_20p12.1	0.0256	1
MPHOSPH10	Amp_13q22.1	0.0256	1
ALDH1A3	Del_15q11.2	0.0256	1
C2orf29	Del_17p12	0.0257	1
L1TD1	Del_14q11.2	0.0257	1
L1TD1	Del_15q21.1	0.0257	1
PTEN	Del_3p26.3	0.0258	1
12q-Amp	Del_15q15.2	0.0258	1
SOX9	17p-Del	0.0259	1
CDH1	Amp_20q11.21	0.026	1
ALPK2	Del_5q21.2	0.026	1
ALPK2	Del_10q25.2	0.026	1
PTEN	Del_21q21.1	0.026	1
BMPR2	Amp_17q12	0.026	1
CTNNB1	13q-Amp	0.0261	1
WNT1	20q-Amp	0.0262	1
FYN	17p-Del	0.0262	1
MAP4K3	20p-Amp	0.0262	1
FAM123B	Del_8p23.2	0.0264	1
SOX9	Amp_13q12.13	0.0264	1
MPHOSPH10	Amp_20q11.21	0.0265	1
MPHOSPH10	Amp_13q12.2	0.0267	1
NEXN	Del_18q22.1	0.0267	1
B2M	Del_8p23.2	0.0268	1
RBPJ	Del_8p23.2	0.0268	1
GMPS	Del_8p23.2	0.0268	1
MLH1	Del_5q23.3	0.0269	1
DDX26B	8p-Del	0.0269	1
WNT1	18p-Del	0.027	1
LARP4B	21q-Del	0.027	1
LARP4B	Del_5q21.2	0.027	1
L1TD1	Del_15q15.2	0.0271	1
NF1	17p-Del	0.0274	1
CTNNB1	Del_18p11.31	0.0274	1
ACVR1B	Amp_20p11.21	0.0275	1
EGR1	Del_8p22	0.0275	1
PTEN	Amp_20q12	0.0275	1
KDM6A	18p-Del	0.0275	1
RBBP7	Del_18q21.2	0.0276	1
9p-Amp	Del_1p36.11	0.0276	1
ERBB2	Amp_20q11.21	0.0277	1
NEXN	Amp_20q11.21	0.0277	1
PTEN	13q-Amp	0.0278	1
ERBB2	Del_18p11.31	0.0279	1
PIK3R1	13q-Amp	0.0279	1
BCOR	Del_14q11.2	0.0284	1
DIP2B	Del_14q11.2	0.0284	1
LARP4B	Del_14q11.2	0.0284	1
ASXL1	18p-Del	0.0285	1
NF2	7p-Amp	0.0286	1
BMPR2	Del_15q22.33	0.0286	1
FAM9A	18p-Del	0.0287	1
SETD2	Del_22q13.32	0.0288	1
ATM	Amp_13q12.2	0.0288	1
ATM	Del_22q13.32	0.0288	1
CDH1	Amp_8q24.21	0.029	1
PTCH1	Del_3p26.3	0.029	1
DIP2B	Amp_20q11.21	0.029	1
PIK3R1	Amp_20q12	0.029	1
TOP2B	Amp_20q11.21	0.029	1
HLA-A	Amp_8q24.21	0.029	1
SETD2	21q-Del	0.029	1
OR4D10	13q-Amp	0.0291	1
DDX26B	13q-Amp	0.0291	1
MLH1	Del_21q21.1	0.0292	1
BCL9	Del_18p11.31	0.0293	1
ST3GAL6	13q-Amp	0.0293	1
PLEKHF2	13q-Amp	0.0293	1
C11orf30	Del_4q35.1	0.0293	1
BCORL1	Del_18p11.31	0.0293	1
21q-Del	Amp_8p11.21	0.0293	1
ZBTB20	Amp_13q12.2	0.0295	1
MAP4K3	Amp_13q12.2	0.0295	1
ATM	Del_15q11.2	0.0295	1
ERBB2	18q-Del	0.0296	1
C11orf30	Del_8p22	0.0296	1
ACVR1B	Del_8p23.2	0.0297	1
KDM6A	20p-Amp	0.0297	1
ALPK2	Del_8p22	0.0298	1
12p-Amp	Del_1p33	0.0298	1
RNF43	20p-Del	0.0299	1
MLH1	Del_17p12	0.03	1
NF2	17p-Del	0.03	1
RHOA	18q-Del	0.03	1
MAP4K3	Del_18q12.2	0.03	1
PLAGL2	18q-Del	0.0301	1
NR1H3	Del_17p12	0.0302	1
CDK12	Amp_13q12.13	0.0302	1
12p-Amp	Del_18p11.31	0.0303	1
B2M	7q-Amp	0.0304	1
MAPK6	Del_18p11.31	0.0304	1
RBBP7	7q-Amp	0.0304	1
FAM123B	13q-Amp	0.0305	1
SOX9	Amp_8p11.21	0.0305	1
SMAD2	18q-Del	0.0305	1
WNT1	Del_17p12	0.0305	1
ALG12	Del_17p12	0.0305	1
SETD2	Del_15q11.2	0.0305	1
TOP2B	8p-Del	0.0307	1
ACVR1B	Del_15q11.2	0.0308	1
BMPR2	Del_4q35.1	0.0308	1
CDH1	17p-Del	0.0309	1
ZBTB20	14q-Del	0.0309	1
PTEN	20q-Amp	0.0309	1
MAP4K3	14q-Del	0.0309	1
IDH1	14q-Del	0.0309	1
KDM6A	17p-Del	0.0309	1
MAPK6	Del_14q11.2	0.031	1
MAPK6	Del_15q21.1	0.031	1
C2orf29	Del_14q11.2	0.031	1
SLC26A8	Del_14q11.2	0.031	1
FKBP9	Del_14q11.2	0.031	1
ALDH1A3	Del_14q11.2	0.031	1
ALDH1A3	Del_15q21.1	0.031	1
NF1	Del_17p12	0.0311	1
TOP2B	Amp_13q12.2	0.0314	1
PTEN	14q-Del	0.0315	1
FAM123B	Amp_13q12.2	0.0316	1
SETD2	Del_8p23.2	0.0317	1
NLRC4	Amp_13q12.13	0.0318	1
PTEN	Amp_13q22.1	0.0318	1
BCORL1	Amp_13q12.13	0.0318	1
ARID1A	13q-Amp	0.0322	1
LARP4B	Del_1p36.11	0.0322	1
Amp_12p13.33	Del_15q21.1	0.0323	1
ACVR1B	Del_4p16.1	0.0324	1
NF1	Amp_20p12.1	0.0324	1
KDM6A	22q-Del	0.0324	1
KDM6A	Del_4p16.1	0.0324	1
Amp_12p13.33	Del_18p11.31	0.0324	1
CRIPAK	Amp_20q12	0.0325	1
B2M	Amp_20p12.1	0.0325	1
RBPJ	Amp_20p12.1	0.0325	1
SOX9	Del_1p33	0.0326	1
MAPK6	Del_15q15.2	0.0326	1
RLIM	Del_18q12.2	0.0326	1
ALDH1A3	Del_15q15.2	0.0326	1
MPHOSPH10	20q-Amp	0.0328	1
PRPS1	17p-Del	0.0328	1
ZNF486	Amp_20q12	0.0328	1
PRKDC	Del_21q11.2	0.0329	1
MGA	22q-Del	0.0329	1
MGA	Del_4p16.1	0.0329	1
ERBB2	Del_1p13.2	0.0329	1
20p-Amp	Del_6q26	0.033	1
CTNNB1	18p-Del	0.0331	1
FKBP9	17p-Del	0.0332	1
12p-Amp	14q-Del	0.0332	1
FAM123B	17p-Del	0.0334	1
MLH1	17p-Del	0.0334	1
FAM9A	Del_17p12	0.0334	1
WNT1	Del_18p11.31	0.0336	1
MAP4K3	18p-Del	0.0336	1
PIK3R1	Amp_13q22.1	0.0338	1
SMAD2	Del_18q22.1	0.0339	1
NF2	Amp_13q12.2	0.0339	1
RB1	Amp_20p11.21	0.0339	1
SOX9	7p-Amp	0.034	1
SOX9	8q-Amp	0.034	1
ASXL1	13q-Amp	0.034	1
PLAGL2	Amp_20q13.12	0.034	1
SETD2	Del_4q35.1	0.034	1
22q-Del	Amp_8p11.23	0.034	1
FBXW7	Del_4q22.1	0.0342	1
FBXW7	4p-Del	0.0343	1
FKBP9	Del_8p22	0.0344	1
ARID1A	Amp_1q31.1	0.0345	1
STARD3NL	Amp_20q12	0.0345	1
NR1H3	Amp_20q12	0.0345	1
FYN	Amp_20q12	0.0345	1
BIRC3	Amp_20q12	0.0345	1
CDK12	Del_18p11.31	0.0346	1
NEXN	20q-Amp	0.0346	1
KDM6A	21q-Del	0.0346	1
P2RY13	Del_18q12.2	0.0347	1
NR1H3	Del_18q12.2	0.0347	1
ALPK2	7p-Amp	0.0349	1
NF2	Del_17p12	0.0351	1
PRKDC	Del_14q11.2	0.0351	1
EGR1	Del_18q12.2	0.0354	1
PLEKHF2	Del_18q12.2	0.0354	1
KDM6A	Del_17p12	0.0354	1
MAPK6	Amp_20q12	0.0356	1
C2orf29	Amp_20q12	0.0356	1
BMPR2	Del_4q22.1	0.0356	1
CTNNB1	Amp_13q12.13	0.0356	1
Amp_8p11.23	Del_22q13.32	0.0356	1
Amp_12p13.33	Del_15q15.2	0.0357	1
L1TD1	20p-Amp	0.036	1
PTEN	20p-Amp	0.036	1
CDK12	Amp_17q12	0.036	1
ALG12	Del_8p22	0.0361	1
LARP4B	7p-Amp	0.0361	1
NF2	Del_21q21.1	0.0362	1
ZBTB20	Del_22q13.32	0.0362	1
IDH1	Del_22q13.32	0.0362	1
BMPR2	4q-Del	0.0363	1
BMPR2	Amp_11p15.5	0.0363	1
RSPH3	Del_18q21.2	0.0364	1
CREBBP	15q-Del	0.0365	1
Amp_12p13.33	Del_15q22.33	0.0365	1
EGR1	Del_8p23.2	0.0366	1
FBXW7	Amp_11p15.5	0.0366	1
L1TD1	14q-Del	0.0366	1
SMAD4	18p-Del	0.0367	1
TOP2B	20q-Amp	0.0369	1
NF2	Del_8p23.2	0.037	1
MGA	Del_22q13.32	0.037	1
20p-Amp	Del_5q23.3	0.037	1
12q-Amp	Del_17p12	0.0371	1
APC	6p-Amp	0.0373	1
C11orf30	8p-Del	0.0373	1
GMPS	Amp_13q22.1	0.0373	1
PRRG1	18p-Del	0.0374	1
C11orf30	17p-Del	0.0375	1
DDX26B	7q-Amp	0.0375	1
7q-Amp	Del_22q13.32	0.0375	1
SMAD2	Amp_20q13.12	0.0377	1
FAM9A	Del_18p11.31	0.0377	1
DDX26B	20p-Amp	0.0377	1
RB1	8p-Amp	0.0377	1
WNT1	13q-Amp	0.0378	1
ALG12	13q-Amp	0.0378	1
KDM6A	20q-Amp	0.0378	1
ARID1A	16p-Amp	0.0379	1
ARID1A	Del_8q11.1	0.0379	1
FMN2	Amp_20p11.21	0.0379	1
RBPJ	Del_15q11.2	0.0379	1
HLA-A	Del_15q11.2	0.0379	1
GMPS	Del_15q11.2	0.0379	1
ATM	4q-Del	0.0379	1
ATM	Del_1p13.2	0.0379	1
DIP2B	20q-Amp	0.038	1
NF1	20p-Amp	0.0381	1
MAP4K3	Del_15q22.33	0.0381	1
CREBBP	17q-Amp	0.0381	1
FBXW7	17p-Del	0.0383	1
FAM123B	14q-Del	0.0385	1
Amp_2q33.1	Del_21q11.2	0.0385	1
FBXW7	Del_1p33	0.0386	1
ERBB2	18p-Del	0.0386	1
20p-Del	Amp_20p11.21	0.0386	1
DIP2B	8p-Amp	0.0387	1
STARD3NL	Del_8p22	0.0388	1
PRKDC	Amp_11p15.5	0.0388	1
PRKDC	Del_1p13.2	0.0388	1
FBXW7	Del_12p13.1	0.0388	1
GPATCH8	Del_8p22	0.0388	1
BIRC3	Del_8p22	0.0388	1
PTCH1	7q-Amp	0.0389	1
ACVR1B	Del_15q21.1	0.039	1
TOP2B	8q-Amp	0.039	1
KDM6A	Del_14q11.2	0.039	1
KDM6A	Del_15q21.1	0.039	1
ROS1	Del_1p36.11	0.0391	1
L1TD1	Amp_8q24.21	0.0391	1
MPHOSPH10	7p-Amp	0.0392	1
PTEN	18p-Del	0.0392	1
CHUK	Del_18q12.2	0.0393	1
ERBB2	Del_18q12.2	0.0395	1
CDH1	Del_21q11.2	0.0396	1
NEXN	Amp_20q13.12	0.0397	1
CDH1	Del_21q21.1	0.0398	1
PTEN	Amp_5p12	0.0398	1
RSPH3	Del_18q22.1	0.0399	1
MLH1	Del_6p25.3	0.0401	1
MLH1	Del_6q26	0.0401	1
MLH1	Del_19p13.3	0.0401	1
ZBTB20	Del_4q35.1	0.0401	1
ALPK2	Del_10q21.1	0.0401	1
PTCH1	Del_21q11.2	0.0401	1
MAP4K3	Del_4q35.1	0.0401	1
NF1	20p-Del	0.0403	1
IQCD	Amp_13q12.13	0.0403	1
ZNF486	Amp_13q12.13	0.0403	1
IQCD	Amp_20q11.21	0.0404	1
PRKDC	5q-Del	0.0405	1
RB1	17p-Del	0.0406	1
CDK12	Del_8p22	0.0406	1
SOX9	Del_21q11.2	0.0408	1
PTCH1	Del_10q25.2	0.0408	1
RB1	Del_10q25.2	0.0408	1
CREBBP	Del_21q11.2	0.0408	1
MPHOSPH10	Del_1p36.11	0.041	1
FAM9A	Del_8p22	0.0412	1
ACVR1B	Del_15q15.2	0.0414	1
MPHOSPH10	Amp_20q13.12	0.0414	1
KDM6A	Del_15q15.2	0.0414	1
MAP4K3	Del_17p12	0.0415	1
SETD2	7p-Amp	0.0415	1
RNF43	Del_17q24.3	0.0416	1
BIRC3	13q-Amp	0.0416	1
TPRKB	Amp_20p12.1	0.0417	1
BCL9	Del_4p16.1	0.0417	1
BCORL1	Del_4p16.1	0.0417	1
CTNNB1	Amp_13q12.2	0.0418	1
ARID1A	Amp_8q24.21	0.0419	1
PLAGL2	Amp_20q12	0.0421	1
ATM	Del_17q24.3	0.0421	1
NLRC4	Amp_13q22.1	0.0422	1
PIK3R1	Amp_20p12.1	0.0422	1
MLH1	Del_21q11.2	0.0423	1
CREBBP	7q-Amp	0.0424	1
MVK	8p-Del	0.0425	1
SMAD2	15q-Del	0.0426	1
RSPH3	20q-Amp	0.0426	1
ACVR1B	Amp_13q12.13	0.0427	1
NF2	21q-Del	0.0427	1
FBXW7	Amp_20p11.21	0.0427	1
DDX26B	Amp_20p12.1	0.0427	1
RLIM	Del_18p11.31	0.0428	1
STARD3NL	Amp_20q11.21	0.043	1
PRKDC	Del_1p36.11	0.043	1
NR1H3	Amp_20q11.21	0.043	1
RB1	Del_5q23.3	0.043	1
FYN	Amp_20q11.21	0.043	1
BIRC3	Amp_20q11.21	0.043	1
KDM6A	Del_18p11.31	0.043	1
L1TD1	Amp_8p11.21	0.0431	1
HLA-A	Amp_8p11.23	0.0432	1
MAPK6	14q-Del	0.0434	1
C2orf29	14q-Del	0.0434	1
SLC26A8	14q-Del	0.0434	1
FKBP9	14q-Del	0.0434	1
ALDH1A3	14q-Del	0.0434	1
CDH1	Del_1p36.11	0.0436	1
7p-Amp	Del_22q13.32	0.0436	1
OR4D10	Amp_13q12.13	0.0437	1
DDX26B	Amp_13q12.13	0.0437	1
RB1	21q-Del	0.0438	1
MAP4K3	18q-Del	0.0438	1
BCOR	14q-Del	0.0441	1
SMAD2	13q-Amp	0.0441	1
DIP2B	14q-Del	0.0441	1
LARP4B	14q-Del	0.0441	1
CREBBP	Del_15q21.1	0.0441	1
NLRC4	Amp_13q12.2	0.0442	1
PRRG1	Del_17p12	0.0442	1
BCORL1	Amp_13q12.2	0.0442	1
CHUK	Del_8p23.2	0.0443	1
C11orf30	20p-Amp	0.0443	1
C11orf30	Del_8p23.2	0.0443	1
SOX9	Del_5q21.2	0.0444	1
ALG12	Del_8p23.2	0.0444	1
PTEN	Del_15q21.1	0.0444	1
TPRKB	18p-Del	0.0445	1
ZBTB20	Del_4q22.1	0.0445	1
BCOR	Amp_17q12	0.0447	1
PIK3R1	Amp_13q12.13	0.0447	1
L1TD1	Del_15q22.33	0.0447	1
CREBBP	5q-Del	0.0447	1
RB1	8q-Amp	0.0448	1
7q-Amp	22q-Del	0.0448	1
DIP2B	Del_8p23.2	0.045	1
ROS1	Del_21q21.1	0.0451	1
RBPJ	Del_15q21.1	0.0451	1
HLA-A	Del_14q11.2	0.0451	1
HLA-A	Del_15q21.1	0.0451	1
GMPS	Del_14q11.2	0.0451	1
GMPS	Del_15q21.1	0.0451	1
ATM	15q-Del	0.0451	1
PIK3R1	20p-Amp	0.0452	1
PIK3R1	Del_8p23.2	0.0452	1
CDK12	Del_5q12.1	0.0452	1
12p-Amp	Del_15q22.33	0.0453	1
PTEN	Del_18p11.31	0.0454	1
PLAGL2	18p-Del	0.0455	1
FKBP9	Del_21q11.2	0.0455	1
PTEN	9p-Amp	0.0456	1
MAPK6	Amp_20q11.21	0.0457	1
SMAD4	20q-Amp	0.0458	1
RLIM	18q-Del	0.0461	1
12q-Amp	Del_22q13.32	0.0463	1
EGR1	18q-Del	0.0467	1
PLEKHF2	18q-Del	0.0467	1
12q-Amp	Del_18q22.1	0.0468	1
FAM123B	7p-Amp	0.0469	1
MLH1	8q-Amp	0.0469	1
NF2	Amp_2q33.1	0.0469	1
NF2	Amp_19q12	0.0469	1
NF1	18q-Del	0.0469	1
MAP4K3	Del_21q21.1	0.0469	1
NEXN	Del_4q35.1	0.0469	1
RBPJ	Del_15q15.2	0.047	1
HLA-A	Del_15q15.2	0.047	1
L1TD1	18p-Del	0.0471	1
NEXN	18p-Del	0.0471	1
MAP4K3	Amp_20p12.1	0.0473	1
SMAD2	Del_5q22.2	0.0474	1
P2RY13	18q-Del	0.0474	1
NR1H3	18q-Del	0.0474	1
ARID1A	Amp_20p11.21	0.0475	1
NF1	Del_18p11.31	0.0477	1
PTCH1	Del_21q21.1	0.0477	1
IFT57	20q-Amp	0.0477	1
RB1	Del_21q21.1	0.0477	1
ZNF486	20q-Amp	0.0477	1
SOX9	20p-Del	0.0478	1
NF2	7q-Amp	0.0478	1
MPHOSPH10	Del_8p22	0.0479	1
BCL9	Amp_20p12.1	0.048	1
BCORL1	Amp_20p12.1	0.048	1
PTEN	Del_4q35.1	0.0481	1
2p-Amp	17p-Del	0.0481	1
2q-Amp	17p-Del	0.0481	1
CHUK	Amp_8q24.21	0.0482	1
TP53	SETD2	0.0483	1
PLAGL2	Amp_20q11.21	0.0483	1
RBBP7	Del_18q12.2	0.0487	1
NF2	Amp_11p15.5	0.0488	1
NF2	Del_1p13.2	0.0488	1
IQCD	Amp_13q22.1	0.0488	1
CDK12	Amp_11p15.5	0.0488	1
CDK12	Del_1p13.2	0.0488	1
MAP4K3	Del_18p11.31	0.0489	1
FKBP9	Del_8p23.2	0.049	1
B2M	Del_1p36.11	0.0491	1
BCOR	Del_17p12	0.0491	1
RPTN	Del_1p36.11	0.0491	1
NLRC4	Amp_8p11.21	0.0491	1
RBBP7	Del_1p36.11	0.0491	1
GMPS	Del_1p36.11	0.0491	1
PTEN	17p-Del	0.0492	1
NF1	Amp_20p11.21	0.0493	1
MAP4K3	15q-Del	0.0493	1
MAP4K3	Amp_12p13.33	0.0493	1
12q-Amp	Del_15q22.33	0.0493	1
C11orf30	Amp_20p11.21	0.0494	1
TP53	BMPR2	0.0495	1
CRIPAK	Amp_17q12	0.0497	1
PRKDC	Del_17q24.3	0.0498	1
MAPK6	Del_22q13.32	0.05	1
PRKDC	Del_4q35.1	0.05	1
MGA	Del_10q21.1	0.05	1
SLC26A8	Del_22q13.32	0.05	1
FKBP9	Del_22q13.32	0.05	1
B2M	7p-Amp	0.0501	1
IQCD	17p-Del	0.0501	1
IFT57	17p-Del	0.0501	1
RBBP7	7p-Amp	0.0501	1
HLA-A	7p-Amp	0.0501	1
7q-Amp	Del_10q23.31	0.0501	1
FMN2	Del_8p22	0.0502	1
IQCD	Amp_13q12.2	0.0503	1
ZNF486	Amp_13q12.2	0.0503	1
PRRG1	Del_18p11.31	0.0504	1
CREBBP	8q-Amp	0.0504	1
PLAGL2	Del_17p12	0.0505	1
BCL9	18p-Del	0.0506	1
NLRC4	Amp_8p11.23	0.0506	1
NLRC4	Amp_20p11.21	0.0506	1
ROS1	Del_6q26	0.0506	1
12p-Amp	Del_17p12	0.0507	1
CRIPAK	14q-Del	0.0508	1
SLC12A6	17p-Del	0.0509	1
PTCH1	Amp_17q12	0.051	1
CDK12	18p-Del	0.051	1
CDK12	Amp_20p11.21	0.051	1
CRIPAK	18p-Del	0.0511	1
PTEN	Amp_20q13.12	0.0511	1
FAM123B	20p-Amp	0.0513	1
ALPK2	7q-Amp	0.0513	1
MPHOSPH10	14q-Del	0.0513	1
STARD3NL	20q-Amp	0.0514	1
NR1H3	20q-Amp	0.0514	1
PIK3R1	Amp_11p15.5	0.0514	1
FYN	20q-Amp	0.0514	1
BIRC3	20q-Amp	0.0514	1
RHOA	Del_18q21.2	0.0515	1
IQCD	Del_18q21.2	0.0515	1
IFT57	Del_18q21.2	0.0515	1
ROS1	Amp_20p11.21	0.0515	1
ZNF486	Del_18q21.2	0.0515	1
ERBB2	Del_1p36.11	0.0516	1
MPHOSPH10	13q-Amp	0.0516	1
SMAD4	Amp_17q24.1	0.0516	1
SLC12A6	20p-Amp	0.0516	1
ACVR1B	4p-Del	0.0518	1
HLA-A	Del_17p12	0.0518	1
KDM6A	4p-Del	0.0518	1
ARID1A	Amp_20p12.1	0.052	1
MAPK6	Del_15q22.33	0.0524	1
SLC26A8	Del_15q22.33	0.0524	1
CDK12	Del_4q22.1	0.0524	1
12q-Amp	Del_4q35.1	0.0525	1
CDK12	Del_5q23.3	0.0526	1
STARD3NL	Del_8p23.2	0.0528	1
BCL9	18q-Del	0.0528	1
P2RY13	20p-Amp	0.0528	1
GPATCH8	Del_8p23.2	0.0528	1
BIRC3	20p-Amp	0.0528	1
FAM123B	4p-Del	0.053	1
ARID1A	Del_5q23.3	0.0531	1
SOX9	Del_15q11.2	0.0531	1
ASXL1	Del_8p23.2	0.0531	1
PRRG1	Del_18q12.2	0.0532	1
SMAD4	Del_3p26.3	0.0533	1
FAM9A	Del_8p23.2	0.0534	1
GRB2	Del_8p23.2	0.0534	1
NLRC4	Del_14q11.2	0.0534	1
SLC12A6	Del_14q11.2	0.0534	1
CREBBP	Del_1p36.11	0.0534	1
IFT57	8p-Del	0.0535	1
PTEN	Del_19p13.3	0.0535	1
RB1	5q-Del	0.0536	1
RB1	Del_3q26.31	0.0536	1
CTNNB1	Amp_20q12	0.0536	1
OR4D10	Amp_13q22.1	0.0538	1
8p-Amp	Del_21q11.2	0.0538	1
PLAGL2	20q-Amp	0.054	1
Amp_20q12	Del_6q26	0.0541	1
NF2	Del_15q15.2	0.0542	1
RLIM	Del_18q21.2	0.0542	1
CDH1	Amp_20p11.21	0.0543	1
DDX26B	Del_14q11.2	0.0543	1
RB1	15q-Del	0.0543	1
SETD2	Amp_17q12	0.0546	1
ERBB2	20p-Amp	0.0547	1
22q-Del	Amp_12p13.33	0.0547	1
FMN2	Del_17p12	0.0548	1
PLAGL2	Del_18p11.31	0.0548	1
PTEN	Del_2p12	0.0548	1
MAPK6	Del_4q35.1	0.0549	1
SLC26A8	Del_4q35.1	0.0549	1
ALDH1A3	Del_4q35.1	0.0549	1
IDH1	8p-Del	0.0549	1
MAP4K3	Del_8p22	0.055	1
TP53	Del_1p36.11	0.0552	1
CDH1	Del_8p22	0.0552	1
RHOA	18p-Del	0.0552	1
IFT57	18p-Del	0.0552	1
ZNF486	18p-Del	0.0552	1
CTNNB1	Amp_20p11.21	0.0552	1
BMPR2	8p-Del	0.0553	1
LARP4B	Del_5q12.1	0.0553	1
KDM6A	Amp_17q12	0.0553	1
Amp_17q12	Del_16q23.1	0.0553	1
TP53	DDX26B	0.0556	1
OR4D10	Amp_13q12.2	0.0557	1
18p-Del	Amp_12p13.33	0.0557	1
PTEN	Amp_13q12.2	0.0558	1
GPATCH8	Amp_20p12.1	0.0559	1
SMAD2	Amp_20q12	0.056	1
6p-Amp	Del_18q12.2	0.056	1
ARID1A	PCBP1	0.0561	1
ARID1A	16q-Amp	0.0561	1
STARD3NL	Del_15q11.2	0.0561	1
NR1H3	Del_15q11.2	0.0561	1
SMAD4	Amp_20q11.21	0.0561	1
GPATCH8	Del_15q11.2	0.0561	1
FAM9A	Del_18q12.2	0.0563	1
PIK3R1	Amp_20q13.12	0.0563	1
RSPH3	Del_18q12.2	0.0563	1
NLRC4	Amp_8q24.21	0.0564	1
SLC26A8	Amp_13q22.1	0.0564	1
SLC12A6	Amp_8q24.21	0.0564	1
ACVR1B	Amp_13q22.1	0.0565	1
RHOA	Del_18q22.1	0.0565	1
IQCD	Del_18q22.1	0.0565	1
IFT57	Del_18q22.1	0.0565	1
TPRKB	Del_18p11.31	0.0567	1
SETD2	17p-Del	0.0567	1
TXNDC2	Del_5q21.2	0.0568	1
MVK	7q-Amp	0.057	1
PTCH1	20p-Del	0.057	1
L1TD1	15q-Del	0.0571	1
NEXN	15q-Del	0.0571	1
BCOR	Amp_20p12.1	0.0573	1
DIP2B	Amp_20p12.1	0.0573	1
Amp_8p11.23	Del_1p13.2	0.0573	1
CHUK	18q-Del	0.0575	1
ATM	Del_15q21.1	0.0578	1
SOX9	9p-Amp	0.0579	1
MLH1	13q-Amp	0.0579	1
ASXL1	Amp_20p11.21	0.0579	1
SMAD4	Amp_15q26.1	0.0584	1
PTEN	Amp_20p11.21	0.0585	1
KDM6A	14q-Del	0.0585	1
MLH1	Amp_13q12.2	0.0587	1
MPHOSPH10	Del_22q13.32	0.0587	1
MPHOSPH10	Amp_20q12	0.0589	1
RB1	Del_15q22.33	0.0589	1
FAM123B	Amp_8q24.21	0.059	1
B2M	17p-Del	0.059	1
RBBP7	17p-Del	0.059	1
12q-Amp	18q-Del	0.0592	1
DIP2B	Amp_11p15.5	0.0593	1
LARP4B	4q-Del	0.0593	1
LARP4B	Amp_11p15.5	0.0593	1
RB1	Del_15q21.1	0.0594	1
BMPR2	Amp_17q24.1	0.0595	1
Amp_17q24.1	Del_10q25.2	0.0595	1
Amp_8p11.21	Del_1p33	0.0596	1
FMN2	Amp_19q12	0.06	1
SMAD4	1p-Del	0.06	1
FMN2	Del_15q11.2	0.0602	1
RNF43	Del_21q11.2	0.0603	1
FKBP9	Del_4q22.1	0.0603	1
ARID1A	8p-Del	0.0604	1
TPRKB	Del_18q21.2	0.0604	1
ROS1	Del_8p23.2	0.0604	1
FAM123B	17q-Amp	0.0605	1
SMAD4	Amp_20q12	0.0605	1
C11orf30	Del_4p16.1	0.0607	1
HLA-A	14q-Del	0.0607	1
GMPS	14q-Del	0.0607	1
EGR1	Amp_13q12.13	0.0609	1
PLEKHF2	Amp_13q12.13	0.0609	1
ARID1A	Del_18p11.31	0.061	1
PTEN	Del_15q11.2	0.061	1
CDK12	Del_10q23.31	0.0611	1
CDH1	8q-Amp	0.0613	1
VCX2	ATM	0.0613	1
ATM	Amp_17q24.1	0.0613	1
MPHOSPH10	Del_15q22.33	0.0614	1
CREBBP	1p-Del	0.0614	1
12p-Amp	Del_14q11.2	0.0614	1
12p-Amp	Del_15q21.1	0.0614	1
ASXL1	Amp_16p11.2	0.0615	1
FAM123B	Amp_8p11.21	0.0619	1
KDM6A	Del_21q11.2	0.0619	1
MGA	Del_1p36.11	0.0623	1
TP53	MAP4K3	0.0624	1
FBXW7	5q-Del	0.0624	1
NF1	Amp_11p15.5	0.0626	1
NF1	Del_1p13.2	0.0626	1
ALPK2	14q-Del	0.0627	1
FYN	Amp_8p11.23	0.0629	1
L1TD1	Del_5q22.2	0.063	1
8p-Amp	Del_22q13.32	0.063	1
Amp_2q33.1	Del_5q22.2	0.063	1
FKBP9	Del_21q21.1	0.0631	1
NF1	1p-Del	0.0634	1
DIP2B	7q-Amp	0.0634	1
GMPS	Del_21q11.2	0.0634	1
ATM	Del_4p16.1	0.0634	1
SOX9	Del_17q24.3	0.0636	1
CDH1	Amp_17q12	0.0636	1
BCOR	Del_5q23.3	0.0636	1
P2RY13	Amp_13q12.13	0.0636	1
NR1H3	Amp_13q12.13	0.0636	1
PTEN	4q-Del	0.0636	1
PTEN	Amp_11p15.5	0.0636	1
LARP4B	Del_5q23.3	0.0636	1
DDX26B	8q-Amp	0.0637	1
TP53	MVK	0.0639	1
IQCD	Del_17p12	0.0641	1
IFT57	Del_17p12	0.0641	1
MPHOSPH10	Del_4q35.1	0.0641	1
C11orf30	Del_5q21.2	0.0642	1
PTEN	Amp_13q12.13	0.0643	1
BCL9	4p-Del	0.0644	1
ROS1	Amp_1q31.1	0.0646	1
ROS1	Amp_17q24.1	0.0646	1
ARID1A	4p-Del	0.0647	1
MLH1	Amp_13q12.13	0.0649	1
SOX9	Amp_8p11.23	0.0652	1
STARD3NL	Del_15q21.1	0.0653	1
TPRKB	Del_18q22.1	0.0653	1
P2RY13	Del_14q11.2	0.0653	1
NR1H3	Del_14q11.2	0.0653	1
NR1H3	Del_15q21.1	0.0653	1
PCBP1	Del_14q11.2	0.0653	1
GPATCH8	Del_14q11.2	0.0653	1
GPATCH8	Del_15q21.1	0.0653	1
18q-Del	Del_16q23.1	0.0654	1
TP53	NLRC4	0.0655	1
FMN2	15q-Del	0.0655	1
TP53	Amp_1q31.1	0.0657	1
RNF43	Amp_11p15.5	0.0658	1
RNF43	Del_1p13.2	0.0658	1
TOP2B	13q-Amp	0.0658	1
12p-Amp	Del_15q15.2	0.0658	1
MAPK6	15q-Del	0.0661	1
RBPJ	Del_8p22	0.0661	1
SLC26A8	15q-Del	0.0661	1
ALDH1A3	15q-Del	0.0661	1
MPHOSPH10	Del_8p23.2	0.0663	1
L1TD1	8p-Del	0.0663	1
FYN	Del_18q21.2	0.0663	1
BIRC3	Del_18q21.2	0.0663	1
L1TD1	Del_18p11.31	0.0664	1
PTEN	Del_3q26.31	0.0664	1
KDM6A	Amp_20q11.21	0.0664	1
APC	Del_17q24.3	0.0665	1
RBBP7	18q-Del	0.0666	1
FAM123B	Del_18q21.2	0.0667	1
NF2	20p-Amp	0.0667	1
RB1	Del_15q15.2	0.0667	1
12q-Amp	Del_10q23.31	0.0669	1
CREBBP	Del_15q11.2	0.0671	1
ST3GAL6	8p-Del	0.0672	1
BCOR	Del_4q22.1	0.0674	1
KDM6A	Amp_20p11.21	0.0675	1
Amp_20p11.21	Del_16q23.1	0.0675	1
CDK12	Del_5q22.2	0.0676	1
PRKDC	Del_21q21.1	0.0677	1
NF1	4p-Del	0.0677	1
PTEN	Del_21q11.2	0.0677	1
CTNNB1	Del_18q22.1	0.0677	1
FMN2	Del_18q22.1	0.0678	1
STARD3NL	Del_15q15.2	0.0678	1
NR1H3	Del_15q15.2	0.0678	1
GPATCH8	Del_15q15.2	0.0678	1
NF1	15q-Del	0.0682	1
ALG12	Del_18q21.2	0.0682	1
DIP2B	Del_8p22	0.0683	1
SMAD4	18q-Del	0.0683	1
NF1	Del_6q26	0.0684	1
NF1	Del_17q24.3	0.0684	1
BCL9	Amp_17q12	0.0684	1
NLRC4	Amp_17q12	0.0684	1
BCORL1	Amp_17q12	0.0684	1
SLC12A6	Amp_17q12	0.0684	1
8p-Amp	Del_8p23.2	0.0684	1
EGR1	17p-Del	0.0688	1
B2M	Del_22q13.32	0.0689	1
GMPS	Del_22q13.32	0.0689	1
ARID1A	7q-Amp	0.0691	1
PIK3R1	Amp_13q12.2	0.0693	1
MLH1	5q-Del	0.0694	1
CDH1	Amp_20p12.1	0.0696	1
NF2	13q-Amp	0.0696	1
SOX9	Del_15q21.1	0.0697	1
Amp_8q24.21	Del_1p13.2	0.0697	1
ATM	Del_21q21.1	0.0698	1
PRKDC	14q-Del	0.07	1
Amp_20q11.21	Del_6q26	0.07	1
ARID1A	Del_3p26.3	0.0701	1
MPHOSPH10	Del_4q22.1	0.0701	1
ZNF486	7q-Amp	0.0701	1
ATM	5q-Del	0.0703	1
GPATCH8	Del_1p36.11	0.0704	1
BIRC3	Del_1p36.11	0.0704	1
16q-Amp	Del_1p36.11	0.0704	1
WNT1	17p-Del	0.0706	1
ALG12	17p-Del	0.0706	1
GMPS	13q-Amp	0.0707	1
PTCH1	14q-Del	0.071	1
SETD2	Del_5q12.1	0.071	1
CDK12	Del_1p33	0.071	1
PTEN	Amp_6p21.1	0.0712	1
CDH1	Del_8p23.2	0.0714	1
ALPK2	Del_1p13.2	0.0714	1
SMAD2	Amp_20q11.21	0.0715	1
DDX26B	14q-Del	0.0718	1
B2M	Del_15q22.33	0.0719	1
RSPH3	18q-Del	0.0719	1
RBPJ	Del_15q22.33	0.0719	1
RB1	Amp_20p12.1	0.0719	1
HLA-A	Del_15q22.33	0.0719	1
GMPS	Del_15q22.33	0.0719	1
RNF43	Del_5q23.3	0.072	1
ACVR1B	4q-Del	0.072	1
ACVR1B	Del_1p13.2	0.072	1
CDH1	Del_14q11.2	0.072	1
RHOA	Del_18p11.31	0.072	1
DIP2B	Amp_8p11.21	0.072	1
KDM6A	4q-Del	0.072	1
KDM6A	Amp_11p15.5	0.072	1
KDM6A	Del_1p13.2	0.072	1
SMAD4	Del_18p11.31	0.0722	1
TP53	FKBP9	0.0723	1
SMAD2	Del_5q21.2	0.0725	1
OR4D10	Del_17p12	0.0725	1
SLC26A8	Del_5q22.2	0.0725	1
PRKDC	7p-Amp	0.0726	1
TOP2B	Del_14q11.2	0.0726	1
MLH1	Del_4q22.1	0.0727	1
PRKDC	Amp_17q12	0.0727	1
ALG12	Del_18q22.1	0.0727	1
NR1H3	Del_18q22.1	0.0728	1
PRRG1	Amp_20p12.1	0.0728	1
FYN	Del_18q22.1	0.0728	1
BIRC3	Del_18q22.1	0.0728	1
8p-Amp	22q-Del	0.0728	1
8p-Amp	Del_4p16.1	0.0728	1
ARID1A	Amp_17q12	0.0732	1
BCOR	Del_10q23.31	0.0732	1
ALPK2	Del_15q11.2	0.0732	1
MPHOSPH10	Del_21q21.1	0.0732	1
TP53	ST3GAL6	0.0733	1
NR1H3	Amp_20q13.12	0.0737	1
FAM123B	Del_18p11.31	0.0738	1
Amp_20p12.1	Del_6q26	0.0739	1
EGR1	Amp_13q12.2	0.074	1
PLEKHF2	Amp_13q12.2	0.074	1
Amp_19q12	Del_8p22	0.074	1
SOX9	Del_15q15.2	0.0744	1
20p-Amp	Del_16q23.1	0.0745	1
CDH1	Del_17q24.3	0.0746	1
OR4D10	Del_21q11.2	0.0747	1
B2M	Del_4q35.1	0.0749	1
NF2	Amp_20p11.21	0.0749	1
PTCH1	Del_1p36.11	0.0749	1
GMPS	Del_4q35.1	0.0749	1
CDH1	14q-Del	0.0752	1
ATM	Del_4q35.1	0.0753	1
FMN2	Del_21q11.2	0.0755	1
ERBB2	20q-Amp	0.0755	1
SETD2	Del_8p22	0.0755	1
ATM	Del_10q25.2	0.0755	1
PIK3R1	Amp_6p21.1	0.0756	1
12p-Amp	18p-Del	0.0756	1
ERBB2	Del_18q21.2	0.0757	1
C2orf29	Amp_20p12.1	0.0758	1
SLC26A8	Amp_20p12.1	0.0758	1
FKBP9	Amp_20p12.1	0.0758	1
12q-Amp	Del_5q22.2	0.076	1
SMAD4	Amp_17q12	0.0763	1
RLIM	15q-Del	0.0765	1
MPHOSPH10	15q-Del	0.0765	1
CDK12	Amp_17q24.1	0.0765	1
1p-Del	Amp_12p13.33	0.0765	1
P2RY13	Amp_13q22.1	0.0767	1
NR1H3	Amp_13q22.1	0.0767	1
DCLK2	Amp_13q22.1	0.0767	1
TOP2B	Amp_13q22.1	0.0768	1
ACVR1B	Del_5q23.3	0.0769	1
BMPR2	Del_4p16.1	0.0769	1
NF1	18p-Del	0.0772	1
NLRC4	14q-Del	0.0772	1
SLC12A6	Amp_13q12.13	0.0773	1
12q-Amp	Del_1p33	0.0773	1
9p-Amp	Del_1p33	0.0773	1
PIK3R1	Del_18p11.31	0.0774	1
SETD2	4q-Del	0.0774	1
SETD2	Amp_11p15.5	0.0774	1
SETD2	Del_1p13.2	0.0774	1
KDM6A	Del_4q35.1	0.0774	1
IQCD	Amp_20q13.12	0.0775	1
IFT57	Amp_20q13.12	0.0775	1
ROS1	Amp_20p12.1	0.0776	1
IDH1	Del_8p23.2	0.0776	1
SOX9	Amp_17q12	0.0779	1
ZBTB20	7q-Amp	0.0779	1
ZBTB20	22q-Del	0.0779	1
ZBTB20	Del_4p16.1	0.0779	1
ALPK2	Del_5q23.3	0.0779	1
SMAD4	16p-Amp	0.0779	1
MAP4K3	7q-Amp	0.0779	1
IDH1	22q-Del	0.0779	1
17q-Amp	Del_4p16.1	0.0779	1
ARID1A	18p-Del	0.078	1
NF1	Del_8q11.1	0.0783	1
CDK12	17p-Del	0.0783	1
IQCD	Del_8p22	0.0785	1
IFT57	Del_8p22	0.0785	1
ZNF486	Del_8p22	0.0785	1
PRKDC	22q-Del	0.0786	1
MVK	Del_14q11.2	0.0786	1
8p-Amp	21q-Del	0.079	1
P2RY13	Amp_13q12.2	0.0791	1
NR1H3	Amp_13q12.2	0.0791	1
BIRC3	Amp_13q12.2	0.0791	1
NF1	Del_4q35.1	0.0793	1
SOX9	Del_18p11.31	0.0794	1
Amp_11p15.5	Amp_16p11.2	0.0794	1
FBXW7	Del_8p23.2	0.0795	1
BCL9	8q-Amp	0.0797	1
RB1	Del_21q11.2	0.0798	1
RNF43	Del_6q26	0.0799	1
RNF43	Del_19p13.3	0.0799	1
FMN2	1p-Del	0.0799	1
CHUK	Del_8p22	0.0799	1
SLC26A8	8p-Del	0.0799	1
TOP2B	4p-Del	0.0799	1
TOP2B	Del_1p36.11	0.08	1
ATM	Amp_11p15.5	0.08	1
IQCD	Del_18q12.2	0.0802	1
PIK3R1	Amp_20q11.21	0.0802	1
IFT57	Del_18q12.2	0.0802	1
PTEN	Del_8p23.2	0.0802	1
ATM	9p-Amp	0.0802	1
ATM	Del_10q21.1	0.0802	1
ZNF486	Del_18q12.2	0.0802	1
EGR1	Amp_20p11.21	0.0803	1
FAM123B	Amp_20p12.1	0.0805	1
MLH1	Amp_20p12.1	0.0805	1
FMN2	Del_17q24.3	0.0805	1
FAM9A	Amp_20q13.12	0.0806	1
NF1	14q-Del	0.0807	1
SETD2	Amp_5p12	0.0807	1
STARD3NL	7p-Amp	0.0808	1
PRKDC	Amp_1q31.1	0.0808	1
P2RY13	7p-Amp	0.0808	1
PCBP1	7p-Amp	0.0808	1
PCBP1	8q-Amp	0.0808	1
FYN	8q-Amp	0.0808	1
BIRC3	8q-Amp	0.0808	1
CREBBP	Del_21q21.1	0.0809	1
FBXW7	2q-Amp	0.081	1
B2M	Amp_8p11.21	0.0812	1
ACVR1B	Amp_8q24.21	0.0812	1
RPTN	Amp_8p11.21	0.0812	1
HLA-A	Amp_8p11.21	0.0812	1
TP53	Amp_12p13.33	0.0813	1
NLRC4	Del_21q11.2	0.0813	1
RBPJ	Del_4q22.1	0.0815	1
GMPS	Del_4q22.1	0.0815	1
CTNNB1	Del_18q21.2	0.0815	1
NF1	Del_1p36.11	0.0816	1
BCL9	Del_18q12.2	0.0818	1
TOP2B	17p-Del	0.0819	1
FBXW7	Del_1p13.2	0.0822	1
SLC12A6	Del_5q12.1	0.0822	1
SMAD2	Del_15q11.2	0.0823	1
ASXL1	Amp_20p12.1	0.0825	1
IFT57	Del_15q11.2	0.0828	1
ARID1A	Del_17q24.3	0.083	1
IQCD	13q-Amp	0.083	1
LARP4B	Del_15q11.2	0.083	1
ZNF486	13q-Amp	0.083	1
ERBB2	9p-Amp	0.0831	1
ERBB2	Del_10q21.1	0.0831	1
Amp_20q13.12	Del_6q26	0.0832	1
ERBB2	Amp_20q12	0.0833	1
PTCH1	Del_4p16.1	0.0835	1
RB1	Del_4p16.1	0.0835	1
MGA	Del_5q12.1	0.0837	1
Amp_8p11.23	Del_10q23.31	0.0837	1
TP53	RBPJ	0.084	1
FMN2	Del_15q21.1	0.0841	1
ALPK2	Del_15q22.33	0.0841	1
DDX26B	Del_15q22.33	0.0842	1
MVK	Del_1p36.11	0.0843	1
NLRC4	Del_8p22	0.0843	1
SETD2	Del_5q23.3	0.0843	1
FAM9A	8p-Del	0.0844	1
GRB2	8p-Del	0.0844	1
CHUK	Del_14q11.2	0.0845	1
C11orf30	Del_14q11.2	0.0845	1
ALPK2	Del_6q26	0.0846	1
ALPK2	Del_19p13.3	0.0846	1
TOP2B	Amp_17q12	0.0846	1
PTCH1	Del_4q22.1	0.0848	1
SMAD4	14q-Del	0.0848	1
RPTN	Del_21q21.1	0.0849	1
P2RY13	14q-Del	0.0849	1
NR1H3	14q-Del	0.0849	1
GPATCH8	14q-Del	0.0849	1
GMPS	Del_21q21.1	0.0849	1
NF2	Amp_20p12.1	0.085	1
Amp_20p12.1	Del_16q23.1	0.0852	1
LARP4B	Del_5q22.2	0.0853	1
12q-Amp	Del_18q21.2	0.0853	1
8p-Amp	Del_4q22.1	0.0854	1
KDM6A	7q-Amp	0.0858	1
7q-Amp	Del_16q23.1	0.0858	1
DIP2B	18p-Del	0.0862	1
KDM6A	Del_4q22.1	0.0864	1
P2RY13	18p-Del	0.0865	1
NR1H3	18p-Del	0.0865	1
FYN	Amp_20p11.21	0.0865	1
BIRC3	18p-Del	0.0865	1
BIRC3	Amp_20p11.21	0.0865	1
SMAD2	20q-Amp	0.0866	1
BCL9	4q-Del	0.0874	1
BCL9	Del_1p13.2	0.0874	1
ALPK2	22q-Del	0.0874	1
NLRC4	4q-Del	0.0874	1
NLRC4	Del_1p13.2	0.0874	1
BCORL1	12p-Amp	0.0874	1
SLC12A6	Del_1p13.2	0.0874	1
OR4D10	Del_4q35.1	0.0875	1
FBXW7	Amp_17q12	0.0875	1
ERBB2	Del_18q22.1	0.0875	1
DDX26B	Del_4q35.1	0.0875	1
KDM6A	Del_10q23.31	0.0877	1
PIK3R1	8q-Amp	0.0878	1
BMPR2	7q-Amp	0.0878	1
FAM123B	Del_1p13.2	0.088	1
STARD3NL	Del_21q11.2	0.0881	1
P2RY13	Del_21q11.2	0.0881	1
TPRKB	Del_18q12.2	0.0882	1
L1TD1	22q-Del	0.0882	1
L1TD1	Del_4p16.1	0.0882	1
B2M	15q-Del	0.0885	1
RBPJ	15q-Del	0.0885	1
RBBP7	15q-Del	0.0885	1
RBBP7	Del_18q22.1	0.0885	1
HLA-A	15q-Del	0.0885	1
GMPS	15q-Del	0.0885	1
Amp_12p13.33	Del_8q11.1	0.0885	1
PTEN	Del_15q15.2	0.0886	1
FMN2	Del_18q12.2	0.0887	1
FBXW7	15q-Del	0.0889	1
RBBP7	20p-Amp	0.0889	1
HLA-A	Del_8p23.2	0.0889	1
RNF43	Amp_6p21.1	0.0891	1
RNF43	Del_3p26.3	0.0891	1
C11orf30	4p-Del	0.0891	1
RB1	Del_6q26	0.0891	1
RB1	Del_19p13.3	0.0891	1
MLH1	Amp_20q13.12	0.0892	1
RPTN	Amp_13q12.13	0.0893	1
RBBP7	Amp_13q12.13	0.0893	1
BMPR2	Del_10q21.1	0.0893	1
FAM123B	Del_8p22	0.0894	1
RLIM	18p-Del	0.0894	1
RLIM	Amp_20p11.21	0.0894	1
1p-Del	Amp_20p11.21	0.0894	1
FMN2	Del_22q13.32	0.0895	1
SETD2	Del_19p13.3	0.0895	1
Amp_20p11.21	Del_6p25.3	0.0896	1
ARID1A	Del_1p33	0.0898	1
PTCH1	4q-Del	0.0902	1
PTCH1	Amp_11p15.5	0.0902	1
PTCH1	Del_1p13.2	0.0902	1
RB1	Del_1p13.2	0.0902	1
BCOR	Amp_17q24.1	0.0903	1
LARP4B	Amp_17q24.1	0.0903	1
NF2	Amp_17q12	0.0904	1
MGA	Del_1p13.2	0.0908	1
CTNNB1	Amp_20q11.21	0.0908	1
NF1	8p-Del	0.0911	1
C11orf30	Amp_20p12.1	0.0911	1
FMN2	Del_15q15.2	0.0912	1
SETD2	8q-Amp	0.0912	1
KDM6A	Del_21q21.1	0.0912	1
NLRC4	13q-Amp	0.0913	1
PRRG1	Amp_13q12.13	0.0913	1
ERBB2	Del_15q22.33	0.0915	1
PIK3R1	Amp_1q31.1	0.0915	1
PIK3R1	Amp_17q24.1	0.0915	1
CREBBP	Amp_17q24.1	0.0915	1
L1TD1	8q-Amp	0.0916	1
PLEKHF2	Del_17p12	0.0918	1
RB1	Amp_17q24.1	0.0921	1
RB1	Del_17q24.3	0.0922	1
CTNNB1	Amp_20q13.12	0.0922	1
Amp_2q33.1	Del_5q21.2	0.0926	1
FMN2	Del_18q21.2	0.0929	1
ALG12	Del_18q12.2	0.0929	1
NLRC4	Del_5q23.3	0.0929	1
SMAD4	Del_18q22.1	0.0929	1
MLH1	14q-Del	0.0931	1
FMN2	20p-Amp	0.0931	1
FMN2	Del_8p23.2	0.0931	1
ASXL1	17p-Del	0.0931	1
FBXW7	Del_21q11.2	0.0934	1
21q-Del	Amp_8p11.23	0.0934	1
FAM9A	17p-Del	0.0938	1
GRB2	17p-Del	0.0938	1
TXNDC2	Amp_8q24.21	0.0939	1
MGA	Del_21q11.2	0.094	1
ALPK2	Del_3p26.3	0.094	1
ASXL1	Del_3p26.3	0.094	1
ZNF486	Amp_20p12.1	0.0944	1
SOX9	18p-Del	0.0945	1
IQCD	Del_14q11.2	0.0945	1
IFT57	Del_14q11.2	0.0945	1
IFT57	Del_15q21.1	0.0945	1
ZNF486	Del_15q21.1	0.0945	1
PTCH1	21q-Del	0.0946	1
B2M	Amp_8q24.21	0.0947	1
OR4D10	Del_4q22.1	0.0947	1
DDX26B	Del_4q22.1	0.0947	1
TOP2B	Del_3p14.2	0.0947	1
PCBP1	Del_22q13.32	0.0949	1
GPATCH8	Del_22q13.32	0.0949	1
RLIM	Amp_20p12.1	0.0952	1
APC	Amp_6p21.1	0.0954	1
ROS1	Del_16p13.3	0.0955	1
TP53	2q-Amp	0.0956	1
SETD2	22q-Del	0.0956	1
SETD2	Del_4p16.1	0.0956	1
NF1	Del_8p23.2	0.096	1
ALPK2	Del_14q11.2	0.096	1
ALPK2	Del_15q21.1	0.096	1
B2M	Del_5q22.2	0.0961	1
RBBP7	Del_5q22.2	0.0961	1
GMPS	Del_5q22.2	0.0961	1
12q-Amp	17p-Del	0.0961	1
BMPR2	Del_22q13.32	0.0965	1
7p-Amp	22q-Del	0.0966	1
8q-Amp	22q-Del	0.0966	1
FBXW7	Del_5q23.3	0.0968	1
BMPR2	Del_17q24.3	0.0968	1
PTCH1	Del_8p23.2	0.0969	1
RB1	Amp_8p11.23	0.0972	1
FMN2	Del_15q22.33	0.0973	1
PTEN	Del_5q12.1	0.0974	1
CRIPAK	Amp_20q13.12	0.0976	1
IFT57	Del_15q15.2	0.0976	1
ZNF486	Del_15q15.2	0.0976	1
TP53	FYN	0.0977	1
PRKDC	Amp_5p12	0.0977	1
SMAD4	Del_21q11.2	0.0977	1
TP53	Del_10q25.2	0.098	1
CRIPAK	Amp_17q24.1	0.0981	1
SMAD2	Del_14q11.2	0.0981	1
SMAD2	Del_15q21.1	0.0981	1
SMAD4	Amp_20q13.12	0.0981	1
SLC12A6	Amp_13q22.1	0.0981	1
ERBB2	Amp_13q12.13	0.0982	1
SOX9	7q-Amp	0.0983	1
PRPS1	Del_18q21.2	0.0983	1
PTGDR	Del_18q21.2	0.0983	1
OR4D10	Del_21q21.1	0.0984	1
MGA	Del_5q23.3	0.0984	1
STARD3NL	Del_15q22.33	0.0985	1
P2RY13	Del_15q22.33	0.0985	1
NR1H3	Del_15q22.33	0.0985	1
PTEN	Del_16q23.1	0.0985	1
GPATCH8	Del_15q22.33	0.0985	1
Del_16q23.1	Del_18p11.31	0.0985	1
ARID1A	Del_21q11.2	0.0988	1
PTEN	Amp_20q11.21	0.0991	1
CDH1	Amp_13q12.13	0.0992	1
SETD2	Del_3p26.3	0.0992	1
NF2	Del_4p16.1	0.0993	1
BCL9	Del_4q35.1	0.0997	1
DDX26B	Amp_8p11.21	0.0997	1
PRRG1	Del_18q21.2	0.0998	1
Amp_8q24.21	Del_1p33	0.0998	1
MAPK6	22q-Del	0.0999	1
C2orf29	Del_4p16.1	0.0999	1
SLC26A8	22q-Del	0.0999	1
SLC26A8	Del_4p16.1	0.0999	1
FKBP9	22q-Del	0.0999	1
ALDH1A3	22q-Del	0.0999	1
ALDH1A3	Del_4p16.1	0.0999	1
TXNDC2	Del_5q12.1	0.1	1
ACVR1B	Amp_8p11.21	0.1	1
STARD3NL	Del_17p12	0.1	1
MGA	Del_6q26	0.1	1
MGA	Del_19p13.3	0.1	1
MVK	14q-Del	0.1	1
P2RY13	Del_17p12	0.1	1
DCLK2	Del_17p12	0.1	1
FYN	Del_17p12	0.1	1
BIRC3	Del_17p12	0.1	1
ATM	14q-Del	0.1	1
Amp_8p11.21	Del_16q23.1	0.1	1
RNF43	Del_21q21.1	0.101	1
TP53	BCOR	0.101	1
TP53	DIP2B	0.101	1
RHOA	Amp_20q12	0.101	1
ERBB2	Amp_20q13.12	0.101	1
ST3GAL6	Del_15q11.2	0.101	1
IQCD	Amp_20q12	0.101	1
PIK3R1	8p-Amp	0.101	1
IFT57	20p-Amp	0.101	1
IFT57	Amp_20q12	0.101	1
IFT57	Del_8p23.2	0.101	1
TOP2B	14q-Del	0.101	1
ZNF486	Del_1p36.11	0.101	1
ZNF486	Del_8p23.2	0.101	1
CREBBP	21q-Del	0.101	1
20p-Amp	Del_3q26.31	0.101	1
FAM123B	Del_18q12.2	0.102	1
SOX9	Amp_5p12	0.102	1
SMAD2	Del_15q15.2	0.102	1
STARD3NL	17p-Del	0.102	1
FAM9A	Amp_20q12	0.102	1
NR1H3	17p-Del	0.102	1
DDX26B	15q-Del	0.102	1
PTEN	15q-Del	0.102	1
FYN	Del_4q35.1	0.102	1
SLC12A6	Amp_13q12.2	0.102	1
TP53	L1TD1	0.103	1
IQCD	18q-Del	0.103	1
ALPK2	Del_15q15.2	0.103	1
PLAGL2	17p-Del	0.103	1
IFT57	18q-Del	0.103	1
ZNF486	18q-Del	0.103	1
9p-Amp	20p-Del	0.103	1
CDH1	13q-Amp	0.104	1
CDH1	Del_1p13.2	0.104	1
MLH1	Amp_8q24.21	0.104	1
PTCH1	Del_8p22	0.104	1
PRRG1	Del_21q11.2	0.104	1
ROS1	8p-Del	0.104	1
C2orf29	17p-Del	0.104	1
PTEN	Del_1p36.11	0.104	1
FYN	Del_18q12.2	0.104	1
CDK12	22q-Del	0.104	1
ATM	Del_1p33	0.104	1
CTNNB1	18q-Del	0.104	1
FAM9A	Amp_13q22.1	0.105	1
ERBB2	8p-Amp	0.105	1
RLIM	Del_17p12	0.105	1
SLC26A8	Del_5q21.2	0.105	1
FKBP9	21q-Del	0.105	1
BCORL1	Del_10q23.31	0.105	1
PRPS1	Del_18q22.1	0.105	1
Amp_8p11.21	Del_7q31.1	0.105	1
FAM123B	18q-Del	0.106	1
SOX9	4q-Del	0.106	1
FMN2	Amp_8q24.21	0.106	1
FMN2	Del_4q35.1	0.106	1
DIP2B	Del_17p12	0.106	1
IFT57	Amp_8q24.21	0.106	1
ROS1	Del_5q12.1	0.106	1
TOP2B	4q-Del	0.106	1
TOP2B	Del_1p13.2	0.106	1
RPTN	Amp_13q22.1	0.107	1
FBXW7	Amp_17q24.1	0.107	1
PIK3R1	Amp_19q12	0.107	1
RBBP7	Amp_13q22.1	0.107	1
SETD2	Del_14q11.2	0.107	1
IDH1	Del_17p12	0.107	1
Amp_8p11.23	Del_1p33	0.107	1
FAM9A	Amp_13q12.2	0.108	1
PTCH1	Del_15q21.1	0.108	1
PRRG1	Amp_13q22.1	0.108	1
PRRG1	Del_18q22.1	0.108	1
LARP4B	Del_15q15.2	0.108	1
SOX9	14q-Del	0.109	1
SMAD2	Amp_13q12.13	0.109	1
NF2	Del_10q25.2	0.109	1
FBXW7	Del_15q15.2	0.109	1
TPRKB	18q-Del	0.109	1
SLC26A8	7q-Amp	0.109	1
KDM6A	Del_15q11.2	0.109	1
Amp_8p11.21	Del_3p14.2	0.109	1
CRIPAK	Amp_20p11.21	0.11	1
RNF43	17q-Amp	0.11	1
BCOR	Amp_8q24.21	0.11	1
NF1	Del_4p16.1	0.11	1
ATXN3L	Del_18q12.2	0.11	1
ZBTB20	4p-Del	0.11	1
NR1H3	Del_4q22.1	0.11	1
NLRC4	Del_4q22.1	0.11	1
FYN	Del_4q22.1	0.11	1
GPATCH8	Del_4q22.1	0.11	1
SETD2	Del_12p13.1	0.11	1
17q-Amp	4p-Del	0.11	1
OR4D10	Del_5q22.2	0.111	1
PRKDC	Del_19p13.3	0.111	1
RPTN	Amp_13q12.2	0.111	1
CHUK	Del_5q12.1	0.111	1
MGA	Amp_6p21.1	0.111	1
MGA	Del_3p26.3	0.111	1
MVK	Del_22q13.32	0.111	1
ALG12	18q-Del	0.111	1
C11orf30	Del_5q12.1	0.111	1
PRRG1	Amp_13q12.2	0.111	1
PRRG1	Del_22q13.32	0.111	1
C2orf29	Amp_20q11.21	0.111	1
RBBP7	Amp_13q12.2	0.111	1
CDK12	Del_10q21.1	0.111	1
GMPS	Amp_13q12.2	0.111	1
ATM	Del_15q15.2	0.111	1
ARID1A	15q-Del	0.112	1
SOX9	Del_6q26	0.112	1
MAPK6	8q-Amp	0.112	1
PRKDC	4q-Del	0.112	1
P2RY13	Del_18p11.31	0.112	1
NR1H3	Del_18p11.31	0.112	1
C2orf29	8q-Amp	0.112	1
SMAD4	Del_6q26	0.112	1
SMAD4	Del_19p13.3	0.112	1
SLC26A8	7p-Amp	0.112	1
DCLK2	Del_18p11.31	0.112	1
FKBP9	7p-Amp	0.112	1
ARID1A	Del_3q26.31	0.113	1
OR4D10	Amp_20q13.12	0.113	1
MPHOSPH10	22q-Del	0.113	1
MPHOSPH10	Del_4p16.1	0.113	1
RB1	Amp_17q12	0.113	1
TP53	RHOA	0.114	1
FAM123B	Del_14q11.2	0.114	1
MLH1	Del_14q11.2	0.114	1
STARD3NL	Del_21q21.1	0.114	1
EGR1	Del_14q11.2	0.114	1
P2RY13	Del_21q21.1	0.114	1
ST3GAL6	Del_14q11.2	0.114	1
ST3GAL6	Del_15q21.1	0.114	1
PTEN	Del_15q22.33	0.114	1
MAP4K3	Del_14q11.2	0.114	1
IDH1	Del_14q11.2	0.114	1
CREBBP	Del_5q12.1	0.114	1
ARID1A	Del_10q25.2	0.115	1
CRIPAK	8q-Amp	0.115	1
SOX9	Del_5q23.3	0.115	1
CDH1	THOC7	0.115	1
MLH1	20q-Amp	0.115	1
EGR1	13q-Amp	0.115	1
MVK	Del_15q22.33	0.115	1
DIP2B	Amp_13q12.13	0.115	1
RBPJ	8p-Del	0.115	1
HLA-A	8p-Del	0.115	1
SLC12A6	7q-Amp	0.115	1
GMPS	8p-Del	0.115	1
12q-Amp	Del_4p16.1	0.115	1
6p-Amp	Del_17p12	0.115	1
ZBTB20	Amp_17q12	0.116	1
ERBB2	Del_21q21.1	0.116	1
ALPK2	17q-Amp	0.116	1
ASXL1	17q-Amp	0.116	1
GRB2	18p-Del	0.116	1
C11orf30	14q-Del	0.116	1
MAP4K3	Amp_17q12	0.116	1
ATM	Del_21q11.2	0.116	1
BCOR	17p-Del	0.117	1
FMN2	4p-Del	0.117	1
OR4D10	Del_18q21.2	0.117	1
CHUK	18p-Del	0.117	1
CHUK	Amp_11p15.5	0.117	1
C11orf30	4q-Del	0.117	1
TOP2B	Del_22q13.32	0.117	1
DCLK2	Amp_20q11.21	0.117	1
LARP4B	8p-Del	0.117	1
NEXN	8p-Amp	0.117	1
CTNNB1	Del_18q12.2	0.117	1
Amp_11p15.5	Del_15q11.2	0.117	1
Amp_20p11.21	Del_3p26.3	0.117	1
STARD3NL	15q-Del	0.118	1
STARD3NL	Amp_12p13.33	0.118	1
NF1	Del_5q12.1	0.118	1
FBXW7	Del_10q21.1	0.118	1
BCL9	Del_1p33	0.118	1
P2RY13	15q-Del	0.118	1
NR1H3	15q-Del	0.118	1
MPHOSPH10	21q-Del	0.118	1
PTEN	Del_14q11.2	0.118	1
GPATCH8	15q-Del	0.118	1
IDH1	Del_18q22.1	0.118	1
RHOA	Amp_20q11.21	0.119	1
FAM9A	Amp_20q11.21	0.119	1
MVK	Del_4q35.1	0.119	1
ZBTB20	Del_15q15.2	0.119	1
IQCD	14q-Del	0.119	1
ALPK2	15q-Del	0.119	1
C11orf30	Amp_8q24.21	0.119	1
PRRG1	Del_4q35.1	0.119	1
IFT57	14q-Del	0.119	1
IFT57	Amp_20q11.21	0.119	1
CDK12	Del_17q24.3	0.119	1
ATM	Amp_10q22.3	0.119	1
12q-Amp	Del_10q21.1	0.119	1
TP53	C11orf30	0.12	1
TP53	MPHOSPH10	0.12	1
ACVR1B	13q-Amp	0.12	1
NF2	Del_22q13.32	0.12	1
PTCH1	Del_15q15.2	0.12	1
PRRG1	Amp_20p11.21	0.12	1
ROS1	Del_17q24.3	0.12	1
Amp_20p11.21	Del_3q26.31	0.12	1
CHUK	Del_21q11.2	0.121	1
ST3GAL6	Del_1p36.11	0.121	1
PIK3R1	20p-Del	0.121	1
RBPJ	Amp_20p11.21	0.121	1
RBBP7	18p-Del	0.121	1
RBBP7	Amp_20p11.21	0.121	1
Amp_8p11.21	Del_21q21.1	0.121	1
RNF43	Del_10q25.2	0.122	1
RHOA	Del_21q11.2	0.122	1
MGA	7p-Amp	0.122	1
BCL9	15q-Del	0.122	1
PCBP1	Amp_8p11.21	0.122	1
RSPH3	Del_15q11.2	0.122	1
TOP2B	Del_15q22.33	0.122	1
DCLK2	Del_8p22	0.122	1
PTEN	17q-Amp	0.122	1
BMPR2	4p-Del	0.122	1
FYN	Amp_8p11.21	0.122	1
SETD2	17q-Amp	0.122	1
SETD2	Del_1p36.11	0.122	1
BIRC3	Amp_8p11.21	0.122	1
ZNF486	Del_21q11.2	0.122	1
CREBBP	Del_6q26	0.122	1
12q-Amp	Del_5q21.2	0.122	1
18q-Del	Amp_1q31.1	0.122	1
RNF43	5q-Del	0.123	1
RNF43	Amp_2q33.1	0.123	1
SOX9	Amp_6p21.1	0.123	1
FBXW7	8p-Amp	0.123	1
CHUK	Del_5q23.3	0.123	1
ROS1	16p-Amp	0.123	1
ROS1	Del_8q11.1	0.123	1
L1TD1	4p-Del	0.123	1
PTEN	Amp_17q24.1	0.123	1
BMPR2	Amp_16p11.2	0.123	1
BCORL1	17p-Del	0.123	1
Amp_1q31.1	Del_18p11.31	0.123	1
ERBB2	15q-Del	0.124	1
PTCH1	7p-Amp	0.124	1
GRB2	Del_18q21.2	0.124	1
NLRC4	Amp_20p12.1	0.124	1
PTEN	Del_6q26	0.124	1
8p-Amp	14q-Del	0.124	1
TXNDC2	Del_10q23.31	0.125	1
DIP2B	Del_18p11.31	0.125	1
PTEN	Amp_15q26.1	0.125	1
BCL9	Amp_17q24.1	0.126	1
NLRC4	Amp_17q24.1	0.126	1
RB1	7q-Amp	0.126	1
BCORL1	Amp_17q24.1	0.126	1
SLC12A6	Amp_17q24.1	0.126	1
ATM	Del_5q12.1	0.126	1
FAM123B	8p-Del	0.127	1
NF2	Amp_8q24.21	0.127	1
NF1	Del_15q22.33	0.127	1
NR1H3	Del_5q22.2	0.127	1
SMAD4	17p-Del	0.127	1
RB1	Amp_13q12.13	0.127	1
L1TD1	Amp_8p11.23	0.127	1
DCLK2	Del_5q22.2	0.127	1
FYN	Del_5q22.2	0.127	1
LARP4B	22q-Del	0.127	1
LARP4B	Del_4p16.1	0.127	1
8p-Amp	4p-Del	0.127	1
ZFP36L2	Del_4p16.1	0.128	1
B2M	22q-Del	0.128	1
B2M	Del_4p16.1	0.128	1
BCOR	Del_10q21.1	0.128	1
SMAD2	17p-Del	0.128	1
FMN2	Amp_17q12	0.128	1
NF2	Del_6q26	0.128	1
MVK	Del_4q22.1	0.128	1
IFT57	8q-Amp	0.128	1
MPHOSPH10	7q-Amp	0.128	1
TOP2B	Del_4q35.1	0.128	1
LARP4B	9p-Amp	0.128	1
SETD2	Amp_17q24.1	0.128	1
GMPS	22q-Del	0.128	1
GMPS	Del_4p16.1	0.128	1
IDH1	20q-Amp	0.128	1
ZNF486	7p-Amp	0.128	1
CREBBP	20p-Del	0.128	1
CHUK	8p-Del	0.129	1
ATXN3L	Amp_17q12	0.129	1
P2RY13	13q-Amp	0.129	1
NR1H3	13q-Amp	0.129	1
ALPK2	5q-Del	0.129	1
ALPK2	Amp_2q33.1	0.129	1
ALPK2	Amp_19q12	0.129	1
SMAD4	16q-Amp	0.129	1
RB1	14q-Del	0.129	1
DCLK2	13q-Amp	0.129	1
CTNNB1	Del_17p12	0.129	1
NF1	Del_1p33	0.13	1
GRB2	Del_17p12	0.13	1
CDK12	7q-Amp	0.13	1
Amp_17q12	Del_10q25.2	0.13	1
ARID1A	7p-Amp	0.131	1
ARID1A	8q-Amp	0.131	1
ARID1A	Del_15q22.33	0.131	1
ARID1A	Del_16p13.3	0.131	1
FAM123B	Del_1p36.11	0.131	1
FMN2	Amp_17q24.1	0.131	1
MAPK6	20p-Amp	0.131	1
IFT57	Del_22q13.32	0.131	1
SLC26A8	Del_15q11.2	0.131	1
ALDH1A3	20p-Amp	0.131	1
ZNF486	Del_22q13.32	0.131	1
FAM123B	Del_18q22.1	0.132	1
ACVR1B	Del_14q11.2	0.132	1
SMAD2	14q-Del	0.132	1
FBXW7	Del_10q23.31	0.132	1
PLEKHF2	Amp_20q13.12	0.132	1
C11orf30	Del_22q13.32	0.132	1
PRRG1	Del_21q21.1	0.132	1
NEXN	Del_15q21.1	0.132	1
Amp_15q26.1	Del_8p22	0.132	1
Amp_19q12	Del_14q11.2	0.132	1
Amp_19q12	Del_15q21.1	0.132	1
RNF43	8q-Amp	0.133	1
FAM123B	Amp_16p11.2	0.133	1
SOX9	Del_10q23.31	0.133	1
B2M	Del_5q21.2	0.133	1
RPTN	20q-Amp	0.133	1
RPTN	21q-Del	0.133	1
BCL9	Del_10q25.2	0.133	1
GRB2	Del_18q22.1	0.133	1
PRRG1	17p-Del	0.133	1
RBPJ	20q-Amp	0.133	1
RBBP7	Del_5q21.2	0.133	1
HLA-A	Del_5q21.2	0.133	1
FYN	18q-Del	0.133	1
BCORL1	Del_10q25.2	0.133	1
GMPS	21q-Del	0.133	1
GMPS	Del_5q21.2	0.133	1
BCOR	Del_5q21.2	0.134	1
FMN2	Del_21q21.1	0.134	1
FAM9A	20q-Amp	0.134	1
NF1	4q-Del	0.134	1
MGA	IDH1	0.134	1
ERBB2	Amp_13q12.2	0.134	1
GRB2	20q-Amp	0.134	1
NLRC4	Del_5q22.2	0.134	1
PIK3R1	1p-Del	0.134	1
LARP4B	Amp_20p12.1	0.134	1
MAP4K3	Del_5q12.1	0.134	1
ATM	21q-Del	0.134	1
IDH1	Del_5q12.1	0.134	1
Amp_12p13.33	Del_4p16.1	0.134	1
SMAD2	Del_5q23.3	0.135	1
PRKDC	7q-Amp	0.135	1
FBXW7	Del_21q21.1	0.135	1
MGA	Del_1p33	0.135	1
IQCD	20q-Amp	0.135	1
IFT57	Del_15q22.33	0.135	1
CDK12	Del_22q13.32	0.135	1
PRPS1	Del_18q12.2	0.135	1
PTGDR	Del_18q12.2	0.135	1
IDH1	Del_8p22	0.135	1
ZNF486	Del_15q22.33	0.135	1
CTNNB1	14q-Del	0.135	1
12p-Amp	Del_4q35.1	0.135	1
Amp_8p11.23	Del_1p36.11	0.135	1
Amp_8p11.23	Del_10q25.2	0.135	1
MLH1	Amp_20q11.21	0.136	1
ERBB2	Amp_5p12	0.136	1
GRB2	Del_14q11.2	0.136	1
GRB2	Del_15q21.1	0.136	1
PIK3R1	Del_18q22.1	0.136	1
RSPH3	Del_15q21.1	0.136	1
SMAD4	Del_18q21.2	0.136	1
IDH1	Amp_20q13.12	0.136	1
KDM6A	7p-Amp	0.136	1
7p-Amp	Del_16q23.1	0.136	1
8q-Amp	Del_16q23.1	0.136	1
RNF43	Del_16p13.3	0.137	1
FAM123B	16q-Amp	0.137	1
MLH1	Del_4q35.1	0.137	1
BCOR	Del_17q24.3	0.137	1
MAPK6	4p-Del	0.137	1
EGR1	20p-Amp	0.137	1
MVK	15q-Del	0.137	1
C11orf30	Del_10q23.31	0.137	1
C2orf29	4p-Del	0.137	1
SMAD4	Amp_16p11.2	0.137	1
SLC26A8	4p-Del	0.137	1
BMPR2	Amp_12p13.33	0.137	1
ALDH1A3	4p-Del	0.137	1
LARP4B	Del_17q24.3	0.137	1
NEXN	Del_15q15.2	0.137	1
Amp_19q12	Del_15q15.2	0.137	1
FBXW7	Del_5q12.1	0.138	1
BCL9	Amp_8p11.21	0.138	1
C11orf30	8q-Amp	0.138	1
C11orf30	Del_15q22.33	0.138	1
SLC12A6	Amp_8p11.21	0.138	1
SOX9	Del_15q22.33	0.139	1
MAPK6	Amp_8q24.21	0.139	1
ERBB2	Del_5q22.2	0.139	1
IFT57	Del_4q35.1	0.139	1
RLIM	Amp_20q12	0.139	1
FKBP9	Amp_8q24.21	0.139	1
ZNF486	Del_4q35.1	0.139	1
CREBBP	Del_5q23.3	0.139	1
BCOR	Del_8p22	0.14	1
EGR1	14q-Del	0.14	1
ST3GAL6	14q-Del	0.14	1
GRB2	Del_15q15.2	0.14	1
RSPH3	Del_15q15.2	0.14	1
NEXN	Del_17p12	0.14	1
ATM	17q-Amp	0.14	1
8q-Amp	Del_1p13.2	0.14	1
18p-Del	Del_16q23.1	0.14	1
Del_1p33	Del_19p13.3	0.14	1
ARID1A	Del_4p16.1	0.141	1
FBXW7	17q-Amp	0.141	1
ZBTB20	4q-Del	0.141	1
ZBTB20	Amp_11p15.5	0.141	1
ZBTB20	Del_1p13.2	0.141	1
PTEN	Del_3p14.2	0.141	1
MAP4K3	12p-Amp	0.141	1
MAP4K3	4q-Del	0.141	1
MAP4K3	Del_1p13.2	0.141	1
17q-Amp	Del_1p13.2	0.141	1
22q-Del	Amp_8q24.21	0.141	1
ATXN3L	Del_3p14.2	0.142	1
CDH1	1p-Del	0.143	1
FMN2	Amp_5p12	0.143	1
MAPK6	Amp_17q12	0.143	1
PRKDC	9p-Amp	0.143	1
PRKDC	Del_10q21.1	0.143	1
NLRC4	Del_15q11.2	0.143	1
C2orf29	Amp_17q12	0.143	1
FKBP9	Amp_17q12	0.143	1
ALDH1A3	Amp_17q12	0.143	1
CTNNB1	Del_7q31.1	0.143	1
Amp_17q12	Del_16p13.3	0.143	1
FMN2	Amp_13q22.1	0.144	1
NF2	Amp_6p21.1	0.144	1
NF2	Del_3p26.3	0.144	1
FAM9A	Del_1p36.11	0.144	1
PRKDC	Del_12p13.1	0.144	1
THOC7	Del_1p36.11	0.144	1
ST3GAL6	Del_21q11.2	0.144	1
DIP2B	Amp_13q22.1	0.144	1
PTEN	Del_5q23.3	0.144	1
APC	BCOR	0.145	1
SOX9	21q-Del	0.145	1
ATXN3L	18q-Del	0.145	1
DDX26B	Del_4p16.1	0.145	1
KDM6A	Del_1p36.11	0.145	1
MVK	Del_5q22.2	0.146	1
ALG12	Amp_13q22.1	0.146	1
RLIM	8p-Amp	0.146	1
8p-Amp	1p-Del	0.146	1
4p-Del	Amp_8p11.21	0.146	1
OR4D10	Amp_20q12	0.147	1
FBXW7	Del_8p22	0.147	1
ATXN3L	Del_18q21.2	0.147	1
MGA	Del_21q21.1	0.147	1
SMAD4	12p-Amp	0.147	1
SMAD4	Amp_11p15.5	0.147	1
SMAD4	Del_1p13.2	0.147	1
SLC26A8	Amp_8p11.23	0.147	1
KDM6A	9p-Amp	0.147	1
8q-Amp	Del_1p33	0.147	1
ARID1A	GGT1	0.148	1
TXNDC2	Amp_17q24.1	0.148	1
RHOA	Del_4q22.1	0.148	1
MGA	Amp_2q33.1	0.148	1
IFT57	Del_4q22.1	0.148	1
L1TD1	Del_5q12.1	0.148	1
TOP2B	Amp_17q24.1	0.148	1
BMPR2	Del_3p14.2	0.148	1
IDH1	Del_5q23.3	0.148	1
SELPLG	Del_18q12.2	0.149	1
C2orf29	Del_18q12.2	0.149	1
SMAD2	Del_10q23.31	0.15	1
SMAD2	Del_22q13.32	0.15	1
OR4D10	21q-Del	0.15	1
OR4D10	Del_5q21.2	0.15	1
ALPK2	8p-Del	0.15	1
ASXL1	14q-Del	0.15	1
ASXL1	8p-Del	0.15	1
DIP2B	Amp_13q12.2	0.15	1
PIK3R1	Del_8q11.1	0.15	1
DDX26B	Del_5q21.2	0.15	1
RB1	Amp_15q26.1	0.15	1
BCORL1	20p-Del	0.15	1
SETD2	Del_16p13.3	0.15	1
SLC12A6	20p-Del	0.15	1
CDK12	Del_4q35.1	0.15	1
ZNF486	Amp_13q22.1	0.15	1
9p-Amp	Del_22q13.32	0.15	1
CDH1	Amp_13q22.1	0.151	1
SMAD2	8p-Del	0.151	1
SMAD2	Amp_8q24.21	0.151	1
FMN2	18q-Del	0.151	1
TPRKB	Amp_13q22.1	0.151	1
DIP2B	13q-Amp	0.151	1
ROS1	Del_10q23.31	0.151	1
HLA-A	7q-Amp	0.151	1
GMPS	7q-Amp	0.151	1
HIST1H1T	Amp_13q22.1	0.151	1
18p-Del	Amp_1q31.1	0.151	1
Amp_20p12.1	Del_1p13.2	0.151	1
RNF43	1p-Del	0.152	1
MLH1	Amp_20q12	0.152	1
BCOR	Del_21q11.2	0.152	1
SELPLG	Del_14q11.2	0.152	1
CHUK	Del_1p33	0.152	1
ASXL1	7p-Amp	0.152	1
C11orf30	Del_1p33	0.152	1
PIK3R1	Del_18q12.2	0.152	1
MPHOSPH10	4p-Del	0.152	1
SMAD4	Del_21q21.1	0.152	1
PTEN	Del_22q13.32	0.152	1
ATM	Del_14q11.2	0.152	1
APC	ZBTB20	0.153	1
RHOA	Del_21q21.1	0.153	1
EGR1	Del_22q13.32	0.153	1
ST3GAL6	Del_22q13.32	0.153	1
TOP2B	15q-Del	0.153	1
BMPR2	Del_5q22.2	0.153	1
ZNF486	Del_21q21.1	0.153	1
CDK12	7p-Amp	0.154	1
CRIPAK	Del_18p11.31	0.155	1
ACVR1B	20p-Amp	0.155	1
PRKDC	4p-Del	0.155	1
NF1	Amp_5p12	0.155	1
FBXW7	Del_15q21.1	0.155	1
PTCH1	8p-Del	0.155	1
SMAD4	Del_18q12.2	0.155	1
L1TD1	4q-Del	0.155	1
FYN	20p-Amp	0.155	1
NEXN	4q-Del	0.155	1
NEXN	Amp_11p15.5	0.155	1
NEXN	Del_1p13.2	0.155	1
BIRC3	Del_8p23.2	0.155	1
5q-Del	Amp_11p15.5	0.155	1
Amp_2q33.1	Del_1p13.2	0.155	1
APC	2q-Amp	0.156	1
MLH1	Amp_1q31.1	0.156	1
MLH1	Amp_17q12	0.156	1
MLH1	Amp_17q24.1	0.156	1
WNT1	Amp_20p11.21	0.156	1
FMN2	21q-Del	0.156	1
ERBB2	12p-Amp	0.156	1
ERBB2	Amp_11p15.5	0.156	1
ALG12	18p-Del	0.156	1
RBBP7	Del_18p11.31	0.156	1
BMPR2	Del_6q26	0.156	1
BMPR2	Del_19p13.3	0.156	1
12q-Amp	Del_18q12.2	0.156	1
TP53	TOP2B	0.157	1
TP53	Del_7q31.1	0.157	1
ZBTB20	Del_21q11.2	0.157	1
C11orf30	Del_4q22.1	0.157	1
C2orf29	Amp_20p11.21	0.157	1
MAP4K3	Del_21q11.2	0.157	1
Amp_12p13.33	Del_5q22.2	0.157	1
Amp_15q26.1	Del_8p23.2	0.157	1
EGR1	Del_15q22.33	0.158	1
CHUK	Del_18p11.31	0.158	1
ATXN3L	Del_18p11.31	0.158	1
ST3GAL6	Del_15q22.33	0.158	1
IFT57	15q-Del	0.158	1
SLC26A8	Del_15q15.2	0.158	1
BMPR2	Del_5q12.1	0.158	1
ZNF486	15q-Del	0.158	1
ZNF486	Del_18q22.1	0.158	1
CREBBP	9p-Amp	0.158	1
SOX9	CTNNB1	0.159	1
FAM9A	13q-Amp	0.159	1
BCL9	Amp_13q12.13	0.159	1
PTCH1	22q-Del	0.159	1
RLIM	Amp_17q12	0.159	1
MPHOSPH10	Amp_17q12	0.159	1
RB1	22q-Del	0.159	1
MAP4K3	17p-Del	0.159	1
SETD2	4p-Del	0.159	1
IDH1	17p-Del	0.159	1
17q-Amp	17p-Del	0.159	1
22q-Del	Amp_20p12.1	0.159	1
CDH1	Del_15q11.2	0.16	1
FMN2	Amp_13q12.13	0.16	1
FMN2	Del_6q26	0.16	1
NF2	Del_8p22	0.16	1
ATM	Del_6q26	0.16	1
CDH1	Amp_13q12.2	0.161	1
OR4D10	18p-Del	0.161	1
CHUK	Amp_1q31.1	0.161	1
CHUK	Amp_17q24.1	0.161	1
ATXN3L	Del_18q22.1	0.161	1
PLEKHF2	7p-Amp	0.161	1
C11orf30	Amp_1q31.1	0.161	1
FAM123B	8q-Amp	0.162	1
EGR1	Del_4q35.1	0.162	1
RPTN	Amp_20q13.12	0.162	1
PIK3R1	Del_1p13.2	0.162	1
ROS1	Amp_16p11.2	0.162	1
RBPJ	Amp_20q13.12	0.162	1
RB1	Del_5q12.1	0.162	1
PRPS1	18q-Del	0.162	1
PTGDR	18q-Del	0.162	1
ARID1A	14q-Del	0.163	1
SOX9	5q-Del	0.163	1
SOX9	Amp_19q12	0.163	1
SOX9	Del_3q26.31	0.163	1
ACVR1B	Del_5q21.2	0.163	1
SMAD2	Del_4q35.1	0.163	1
FMN2	RHOA	0.163	1
MAPK6	Del_1p36.11	0.163	1
PRKDC	IDH1	0.163	1
ZBTB20	Del_10q23.31	0.163	1
PLEKHF2	Amp_20q12	0.163	1
NR1H3	Amp_8q24.21	0.163	1
C2orf29	Del_1p36.11	0.163	1
L1TD1	Del_5q23.3	0.163	1
FKBP9	Del_1p36.11	0.163	1
FKBP9	Del_5q12.1	0.163	1
HLA-A	8p-Amp	0.163	1
FYN	Amp_8q24.21	0.163	1
ALDH1A3	Del_1p36.11	0.163	1
ALDH1A3	Del_5q12.1	0.163	1
GPATCH8	Amp_8q24.21	0.163	1
MAP4K3	Del_10q23.31	0.163	1
SETD2	20p-Del	0.163	1
BIRC3	Amp_8q24.21	0.163	1
IDH1	Del_10q23.31	0.163	1
Amp_19q12	Del_5q23.3	0.163	1
FAM123B	Amp_5p12	0.164	1
MLH1	Amp_5p12	0.164	1
RHOA	Amp_20p11.21	0.164	1
CHUK	Del_21q21.1	0.164	1
TPRKB	Del_14q11.2	0.164	1
TPRKB	Del_15q21.1	0.164	1
IQCD	18p-Del	0.164	1
PCBP1	22q-Del	0.164	1
PCBP1	Del_4p16.1	0.164	1
PIK3R1	Amp_8q24.21	0.164	1
IFT57	Amp_20p11.21	0.164	1
GPATCH8	22q-Del	0.164	1
GPATCH8	Del_4p16.1	0.164	1
ZNF486	Amp_20p11.21	0.164	1
CREBBP	Amp_8p11.23	0.164	1
STARD3NL	8p-Del	0.165	1
P2RY13	8p-Del	0.165	1
NR1H3	8p-Del	0.165	1
GRB2	14q-Del	0.165	1
PCBP1	8p-Del	0.165	1
ROS1	Del_15q21.1	0.165	1
L1TD1	Amp_20p12.1	0.165	1
DCLK2	8p-Del	0.165	1
FYN	8p-Del	0.165	1
GPATCH8	8p-Del	0.165	1
SETD2	14q-Del	0.165	1
BIRC3	8p-Del	0.165	1
21q-Del	Amp_8q24.21	0.165	1
Amp_20p12.1	Del_3q26.31	0.165	1
TP53	FAM123B	0.166	1
B2M	8q-Amp	0.166	1
CDH1	Del_8q11.1	0.166	1
FMN2	8p-Del	0.166	1
NF2	9p-Amp	0.166	1
RPTN	7p-Amp	0.166	1
RPTN	8q-Amp	0.166	1
MGA	7q-Amp	0.166	1
ERBB2	Del_5q23.3	0.166	1
ROS1	Del_22q13.32	0.166	1
HLA-A	8q-Amp	0.166	1
HLA-A	17p-Del	0.166	1
GMPS	7p-Amp	0.166	1
TXNDC2	Del_5q22.2	0.167	1
SMAD2	SMAD4	0.167	1
PCBP1	Del_18q21.2	0.167	1
LARP4B	Del_22q13.32	0.167	1
12p-Amp	18q-Del	0.167	1
8p-Del	Amp_15q26.1	0.167	1
Amp_8p11.21	Del_21q11.2	0.167	1
APC	12q-Amp	0.168	1
RHOA	Del_5q22.2	0.168	1
TPRKB	Del_15q15.2	0.168	1
RLIM	20p-Amp	0.168	1
DCLK2	Amp_13q12.13	0.168	1
LARP4B	7q-Amp	0.168	1
BIRC3	Amp_13q12.13	0.168	1
Amp_20q13.12	Del_6p25.3	0.168	1
RNF43	16p-Amp	0.169	1
B2M	4p-Del	0.169	1
PRKDC	Del_4p16.1	0.169	1
RPTN	Del_8p22	0.169	1
NF1	Del_10q25.2	0.169	1
BCL9	Del_15q21.1	0.169	1
NLRC4	Del_15q21.1	0.169	1
C11orf30	Del_10q25.2	0.169	1
RBBP7	Del_8p22	0.169	1
HLA-A	Del_8p22	0.169	1
BMPR2	Del_3p26.3	0.169	1
BCORL1	12q-Amp	0.169	1
BCORL1	Del_14q11.2	0.169	1
GMPS	4p-Del	0.169	1
CREBBP	Del_10q23.31	0.169	1
1p-Del	Amp_8p11.23	0.169	1
MLH1	Del_10q25.2	0.17	1
STARD3NL	21q-Del	0.17	1
FAM9A	Del_21q11.2	0.17	1
THOC7	Del_21q11.2	0.17	1
P2RY13	21q-Del	0.17	1
NR1H3	Del_5q21.2	0.17	1
PCBP1	Del_5q21.2	0.17	1
DCLK2	Del_5q21.2	0.17	1
C14orf184	Del_17p12	0.17	1
GPATCH8	Del_5q21.2	0.17	1
MAP4K3	Del_22q13.32	0.17	1
8p-Amp	Del_4q35.1	0.17	1
RNF43	Del_10q21.1	0.171	1
MAPK6	4q-Del	0.171	1
MAPK6	Amp_11p15.5	0.171	1
MAPK6	Del_1p13.2	0.171	1
RHOA	17p-Del	0.171	1
C11orf30	15q-Del	0.171	1
PRRG1	13q-Amp	0.171	1
SLC26A8	4q-Del	0.171	1
SLC26A8	Amp_11p15.5	0.171	1
SLC26A8	Del_1p13.2	0.171	1
FKBP9	12p-Amp	0.171	1
FKBP9	4q-Del	0.171	1
FKBP9	Amp_11p15.5	0.171	1
ALDH1A3	4q-Del	0.171	1
ALDH1A3	Amp_11p15.5	0.171	1
CDK12	Amp_5p12	0.171	1
PTGDR	17p-Del	0.171	1
IDH1	Del_18q12.2	0.171	1
ZNF486	17p-Del	0.171	1
Amp_8q24.21	Del_21q11.2	0.171	1
Amp_12p13.33	Del_1p13.2	0.171	1
CDH1	Del_6q26	0.172	1
EGR1	Del_4q22.1	0.172	1
TPRKB	Del_1p36.11	0.172	1
RB1	Amp_19q12	0.172	1
14q-Del	Amp_19q12	0.172	1
CRIPAK	Del_8p22	0.173	1
OR4D10	Amp_20q11.21	0.173	1
MAPK6	Amp_8p11.21	0.173	1
NF1	Amp_13q22.1	0.173	1
PTCH1	Del_22q13.32	0.173	1
RLIM	Del_3p14.2	0.173	1
SLC26A8	Amp_8p11.21	0.173	1
RB1	Del_22q13.32	0.173	1
IDH1	Amp_13q22.1	0.173	1
PIK3R1	Del_21q21.1	0.174	1
APC	Amp_17q12	0.175	1
OR4D10	Del_18q12.2	0.175	1
NF2	8p-Del	0.175	1
PRKDC	THOC7	0.175	1
DIP2B	Del_15q22.33	0.175	1
MPHOSPH10	Del_14q11.2	0.175	1
MPHOSPH10	Del_15q21.1	0.175	1
LARP4B	Del_15q22.33	0.175	1
CREBBP	Del_17q24.3	0.175	1
20p-Del	Del_6p25.3	0.175	1
SOX9	Del_21q21.1	0.176	1
ZFP36L2	Amp_17q12	0.176	1
B2M	Amp_17q12	0.176	1
BCOR	8p-Amp	0.176	1
RPTN	Amp_17q12	0.176	1
ZBTB20	Del_15q22.33	0.176	1
ASXL1	16p-Amp	0.176	1
ROS1	Del_15q15.2	0.176	1
RBBP7	Amp_17q12	0.176	1
HLA-A	Amp_17q12	0.176	1
CTNNB1	Amp_17q12	0.176	1
SMAD2	Del_17p12	0.177	1
OR4D10	7q-Amp	0.177	1
MGA	Del_5q22.2	0.177	1
BCL9	Del_15q15.2	0.177	1
ST3GAL6	Del_21q21.1	0.177	1
NLRC4	Del_15q15.2	0.177	1
RB1	13q-Amp	0.177	1
BCORL1	Del_15q15.2	0.177	1
MAP4K3	Del_8p23.2	0.177	1
Amp_8p11.21	Del_10q25.2	0.177	1
CRIPAK	PRKDC	0.178	1
FAM123B	Del_4p16.1	0.178	1
ZFP36L2	13q-Amp	0.178	1
CDH1	15q-Del	0.178	1
FMN2	Amp_6p21.1	0.178	1
NF2	14q-Del	0.178	1
RPTN	13q-Amp	0.178	1
ATXN3L	Del_21q11.2	0.178	1
PCBP1	Amp_20q13.12	0.178	1
RBBP7	13q-Amp	0.178	1
RBBP7	Del_15q11.2	0.178	1
L1TD1	Del_10q23.31	0.178	1
DCLK2	Amp_20q13.12	0.178	1
PTEN	22q-Del	0.178	1
PTEN	Del_4p16.1	0.178	1
NEXN	Del_21q11.2	0.178	1
ATM	Amp_16p11.2	0.178	1
12p-Amp	17p-Del	0.178	1
Amp_16p11.2	Del_5q21.2	0.178	1
SOX9	Del_10q25.2	0.179	1
SOX9	Del_16p13.3	0.179	1
FAM9A	Del_22q13.32	0.179	1
PTCH1	Del_14q11.2	0.179	1
GRB2	Del_22q13.32	0.179	1
PCBP1	Del_18q22.1	0.179	1
C2orf29	Del_5q23.3	0.179	1
SLC26A8	Del_5q23.3	0.179	1
RB1	Del_14q11.2	0.179	1
BMPR2	Del_5q23.3	0.179	1
CRIPAK	Amp_13q22.1	0.18	1
NF1	Del_19p13.3	0.18	1
BCL9	Del_17q24.3	0.18	1
NLRC4	Del_17q24.3	0.18	1
PIK3R1	8p-Del	0.18	1
MPHOSPH10	Del_5q12.1	0.18	1
MAP4K3	Del_1p33	0.18	1
17q-Amp	Del_1p33	0.18	1
ACVR1B	14q-Del	0.181	1
FMN2	Amp_11p15.5	0.181	1
SELPLG	Del_17p12	0.181	1
OR4D10	8p-Amp	0.181	1
RHOA	Amp_8p11.21	0.181	1
TPRKB	Del_17p12	0.181	1
ALPK2	9p-Amp	0.181	1
ASXL1	12q-Amp	0.181	1
IFT57	Amp_8p11.21	0.181	1
MPHOSPH10	Del_15q15.2	0.181	1
IDH1	Amp_20q12	0.181	1
9p-Amp	Amp_17q12	0.181	1
TP53	SMAD2	0.182	1
SOX9	Del_1p36.11	0.182	1
EGR1	15q-Del	0.182	1
ST3GAL6	15q-Del	0.182	1
ALG12	Del_18p11.31	0.182	1
Amp_20p12.1	Del_22q13.32	0.182	1
SMAD2	Del_21q21.1	0.183	1
STARD3NL	Amp_20p12.1	0.183	1
NF2	17q-Amp	0.183	1
FBXW7	Del_6q26	0.183	1
P2RY13	Amp_20p12.1	0.183	1
PTCH1	Del_10q21.1	0.183	1
RB1	9p-Amp	0.183	1
DCLK2	Amp_20p12.1	0.183	1
BIRC3	Amp_20p12.1	0.183	1
IDH1	Del_4q35.1	0.183	1
ZFP36L2	Del_18q21.2	0.184	1
NF2	Del_17q24.3	0.184	1
RHOA	Del_17p12	0.184	1
FAM9A	Del_15q22.33	0.184	1
PRKDC	21q-Del	0.184	1
PRKDC	Amp_8p11.21	0.184	1
PRKDC	Del_1p33	0.184	1
PRKDC	Del_5q21.2	0.184	1
RPTN	Del_18q21.2	0.184	1
THOC7	Del_8p23.2	0.184	1
MGA	20p-Del	0.184	1
ERBB2	Del_17p12	0.184	1
GRB2	20p-Amp	0.184	1
NLRC4	Del_1p36.11	0.184	1
RSPH3	20p-Amp	0.184	1
RSPH3	Del_15q22.33	0.184	1
TOP2B	Amp_20p11.21	0.184	1
BCORL1	Del_1p36.11	0.184	1
SETD2	Amp_8p11.21	0.184	1
CDK12	Del_6q26	0.184	1
CDK12	Del_19p13.3	0.184	1
ZNF486	Del_17p12	0.184	1
Amp_1q31.1	Del_17p12	0.184	1
Amp_13q12.13	Del_16q23.1	0.184	1
ARID1A	Del_6q26	0.185	1
ARID1A	Del_19p13.3	0.185	1
CRIPAK	13q-Amp	0.185	1
PRKDC	Amp_2q33.1	0.185	1
NF1	Del_14q11.2	0.185	1
MVK	22q-Del	0.185	1
MVK	Del_4p16.1	0.185	1
PRRG1	22q-Del	0.185	1
TOP2B	Del_15q11.2	0.185	1
SLC12A6	13q-Amp	0.185	1
8p-Amp	4q-Del	0.185	1
CRIPAK	Amp_13q12.2	0.186	1
SOX9	15q-Del	0.186	1
ACVR1B	Amp_20p12.1	0.186	1
PTCH1	15q-Del	0.186	1
C11orf30	Del_5q22.2	0.186	1
LARP4B	4p-Del	0.186	1
ARID1A	Del_15q11.2	0.187	1
ARID1A	Del_21q21.1	0.187	1
FBXW7	NR1H3	0.187	1
PLEKHF2	Amp_20q11.21	0.187	1
NLRC4	Del_4p16.1	0.187	1
PIK3R1	Del_18q21.2	0.187	1
ROS1	4p-Del	0.187	1
TOP2B	Amp_8p11.21	0.187	1
BCORL1	7p-Amp	0.187	1
SLC12A6	Del_4p16.1	0.187	1
Amp_8p11.21	Del_6p25.3	0.187	1
MLH1	Amp_20p11.21	0.188	1
FMN2	Del_18p11.31	0.188	1
C11orf30	20p-Del	0.188	1
MPHOSPH10	4q-Del	0.188	1
MPHOSPH10	Del_1p13.2	0.188	1
DDX26B	4p-Del	0.188	1
12p-Amp	1p-Del	0.188	1
TP53	ZFP36L2	0.189	1
TP53	RBBP7	0.189	1
TP53	GMPS	0.189	1
FMN2	8q-Amp	0.189	1
FAM9A	Del_4q35.1	0.189	1
ZBTB20	Amp_1q31.1	0.189	1
ZBTB20	Amp_17q24.1	0.189	1
ERBB2	17q-Amp	0.189	1
ASXL1	Amp_8q24.21	0.189	1
GRB2	Del_4q35.1	0.189	1
RSPH3	Del_4q35.1	0.189	1
MAP4K3	Amp_1q31.1	0.189	1
MAP4K3	Amp_17q24.1	0.189	1
IDH1	Amp_1q31.1	0.189	1
ACVR1B	Amp_16p11.2	0.19	1
NF2	Del_14q11.2	0.19	1
PTCH1	4p-Del	0.19	1
PTCH1	Del_15q22.33	0.19	1
RLIM	20q-Amp	0.19	1
MLH1	21q-Del	0.191	1
WNT1	Del_8p22	0.191	1
MVK	Del_5q21.2	0.191	1
PRRG1	21q-Del	0.191	1
RBPJ	Del_3p14.2	0.191	1
SETD2	Del_10q21.1	0.191	1
16p-Amp	Del_3p14.2	0.191	1
Amp_2q33.1	Del_22q13.32	0.191	1
Amp_19q12	Del_22q13.32	0.191	1
SELPLG	18q-Del	0.192	1
FBXW7	Del_5q22.2	0.192	1
ERBB2	Del_21q11.2	0.192	1
C2orf29	18q-Del	0.192	1
Amp_1q31.1	Del_21q11.2	0.192	1
Amp_8p11.23	Del_7q31.1	0.192	1
Amp_11p15.5	Del_5q22.2	0.192	1
EGR1	Del_5q22.2	0.193	1
BCL9	Amp_13q22.1	0.193	1
PTCH1	Amp_5p12	0.193	1
8q-Amp	21q-Del	0.193	1
DIP2B	20p-Amp	0.194	1
20p-Del	Amp_11p15.5	0.194	1
Amp_8q24.21	Del_14q11.2	0.194	1
APC	RNF43	0.195	1
B2M	Amp_8p11.23	0.195	1
TXNDC2	12q-Amp	0.195	1
TXNDC2	Del_10q21.1	0.195	1
CDH1	Amp_6p21.1	0.195	1
CDH1	Del_3p26.3	0.195	1
SELPLG	14q-Del	0.195	1
MAPK6	Del_10q23.31	0.195	1
RHOA	Amp_20q13.12	0.195	1
RPTN	Amp_8p11.23	0.195	1
ATXN3L	17p-Del	0.195	1
TPRKB	14q-Del	0.195	1
SLC26A8	Del_10q23.31	0.195	1
FKBP9	Del_10q23.31	0.195	1
ALDH1A3	Del_10q23.31	0.195	1
NEXN	17p-Del	0.195	1
ATM	Amp_6p21.1	0.195	1
12q-Amp	Del_6p25.3	0.195	1
12q-Amp	Del_19p13.3	0.195	1
17p-Del	Amp_19q12	0.195	1
Amp_8q24.21	Del_21q21.1	0.195	1
Del_16q23.1	Del_18q21.2	0.195	1
APC	Amp_11p15.5	0.196	1
FAM123B	FMN2	0.196	1
SOX9	1p-Del	0.196	1
OR4D10	20q-Amp	0.196	1
OR4D10	Amp_17q12	0.196	1
NF1	Del_3p14.2	0.196	1
MGA	Amp_17q12	0.196	1
BCL9	Del_5q21.2	0.196	1
NLRC4	21q-Del	0.196	1
NLRC4	Del_5q21.2	0.196	1
PRRG1	8p-Del	0.196	1
DDX26B	Amp_17q12	0.196	1
LARP4B	Amp_17q12	0.196	1
NEXN	Del_1p33	0.196	1
HIST1H1T	Del_18p11.31	0.196	1
Amp_8p11.23	Del_15q21.1	0.196	1
FMN2	17p-Del	0.197	1
PTCH1	Del_15q11.2	0.197	1
SMAD4	Amp_5p12	0.197	1
RB1	Del_15q11.2	0.197	1
PRPS1	Del_14q11.2	0.197	1
PTGDR	Del_14q11.2	0.197	1
PTGDR	Del_15q21.1	0.197	1
8q-Amp	Del_14q11.2	0.197	1
SOX9	8p-Amp	0.198	1
CDH1	Del_15q22.33	0.198	1
MLH1	Amp_8p11.23	0.198	1
ZBTB20	Del_10q25.2	0.198	1
DCLK2	Amp_13q12.2	0.198	1
BMPR2	17q-Amp	0.198	1
MAP4K3	Del_4q22.1	0.198	1
MAP4K3	Del_10q25.2	0.198	1
CDK12	8p-Del	0.198	1
CDK12	Amp_6p21.1	0.198	1
CDK12	Del_14q11.2	0.198	1
CTNNB1	Del_14q11.2	0.198	1
17q-Amp	Del_10q25.2	0.198	1
FAM123B	Del_5q12.1	0.199	1
ZFP36L2	Del_18q22.1	0.199	1
B2M	Del_5q12.1	0.199	1
MAPK6	Amp_20p12.1	0.199	1
RPTN	Del_18q22.1	0.199	1
MGA	Del_8q11.1	0.199	1
BCL9	Amp_13q12.2	0.199	1
RBPJ	Del_5q12.1	0.199	1
RBBP7	Del_5q12.1	0.199	1
HLA-A	Del_5q12.1	0.199	1
ALDH1A3	Amp_20p12.1	0.199	1
NEXN	Del_15q22.33	0.199	1
GMPS	Del_5q12.1	0.199	1
CREBBP	Amp_2q33.1	0.199	1
CREBBP	Amp_19q12	0.199	1
Amp_19q12	Del_15q22.33	0.199	1
GGT1	Amp_20p12.1	0.2	1
SELPLG	Del_18q21.2	0.2	1
FAM9A	8q-Amp	0.2	1
FAM9A	Del_4q22.1	0.2	1
TPRKB	Del_21q11.2	0.2	1
GRB2	Del_4q22.1	0.2	1
PLAGL2	Amp_13q12.13	0.2	1
RSPH3	Del_4q22.1	0.2	1
C2orf29	Del_18q21.2	0.2	1
CTNNB1	20p-Del	0.2	1
ZFP36L2	Del_14q11.2	0.201	1
B2M	Del_14q11.2	0.201	1
IQCD	Del_18p11.31	0.201	1
IFT57	Del_18p11.31	0.201	1
ROS1	Amp_17q12	0.201	1
PTEN	12p-Amp	0.201	1
PTEN	Del_1p13.2	0.201	1
PTGDR	Del_15q15.2	0.201	1
MLH1	Amp_6p21.1	0.202	1
OR4D10	Del_18p11.31	0.202	1
MAPK6	Del_21q11.2	0.202	1
PRKDC	Amp_17q24.1	0.202	1
PRKDC	Del_3p14.2	0.202	1
BCL9	8p-Del	0.202	1
ALPK2	Del_4q35.1	0.202	1
DIP2B	Del_4q22.1	0.202	1
PCBP1	8p-Amp	0.202	1
SMAD4	17q-Amp	0.202	1
FYN	8p-Amp	0.202	1
ALDH1A3	Del_21q11.2	0.202	1
12p-Amp	Del_8p23.2	0.202	1
SMAD2	20p-Del	0.203	1
NF1	Del_8p22	0.203	1
RLIM	Amp_8p11.21	0.203	1
MPHOSPH10	Amp_20p11.21	0.203	1
CREBBP	Del_1p33	0.203	1
1p-Del	Amp_8p11.21	0.203	1
8p-Del	Amp_19q12	0.203	1
FAM123B	20p-Del	0.204	1
CDH1	Amp_1q31.1	0.204	1
CDH1	Amp_17q24.1	0.204	1
EGR1	Amp_13q22.1	0.204	1
8p-Amp	Del_21q21.1	0.204	1
BCOR	7p-Amp	0.205	1
FAM9A	Del_21q21.1	0.205	1
THOC7	Del_21q21.1	0.205	1
ZBTB20	Del_21q21.1	0.205	1
L1TD1	Amp_1q31.1	0.205	1
GMPS	Amp_13q12.13	0.205	1
IDH1	Del_21q21.1	0.205	1
Amp_17q24.1	Del_4p16.1	0.205	1
B2M	4q-Del	0.206	1
B2M	Amp_11p15.5	0.206	1
B2M	Del_1p13.2	0.206	1
TXNDC2	Del_17q24.3	0.206	1
ACVR1B	Del_22q13.32	0.206	1
OR4D10	Del_15q11.2	0.206	1
RPTN	Amp_20q12	0.206	1
RPTN	Del_1p13.2	0.206	1
IFT57	SMAD4	0.206	1
DDX26B	Del_15q11.2	0.206	1
RBPJ	4q-Del	0.206	1
RBPJ	Amp_11p15.5	0.206	1
RBPJ	Amp_20q12	0.206	1
L1TD1	Del_4q35.1	0.206	1
TOP2B	Del_17q24.3	0.206	1
HLA-A	12p-Amp	0.206	1
HLA-A	Amp_11p15.5	0.206	1
HLA-A	Del_1p13.2	0.206	1
LARP4B	Del_19p13.3	0.206	1
GMPS	4q-Del	0.206	1
GMPS	Amp_11p15.5	0.206	1
GMPS	Del_1p13.2	0.206	1
PRPS1	Del_1p36.11	0.206	1
ATM	8p-Del	0.206	1
12p-Amp	Del_8q11.1	0.206	1
16p-Amp	Amp_11p15.5	0.206	1
Amp_5p12	Del_1p36.11	0.206	1
STARD3NL	7q-Amp	0.207	1
OR4D10	17p-Del	0.207	1
P2RY13	7q-Amp	0.207	1
NR1H3	7q-Amp	0.207	1
GRB2	18q-Del	0.207	1
PCBP1	7q-Amp	0.207	1
FYN	7q-Amp	0.207	1
GPATCH8	7q-Amp	0.207	1
SETD2	Del_17q24.3	0.207	1
SOX9	Del_5q22.2	0.208	1
PLEKHF2	20q-Amp	0.208	1
DIP2B	Amp_8q24.21	0.208	1
RB1	Amp_13q12.2	0.208	1
LARP4B	Amp_8q24.21	0.208	1
GMPS	Del_15q15.2	0.208	1
CREBBP	Del_5q21.2	0.208	1
KDM6A	8p-Amp	0.208	1
WNT1	8p-Del	0.209	1
RHOA	Del_4p16.1	0.209	1
PRKDC	Del_16p13.3	0.209	1
NF1	Del_3p26.3	0.209	1
CHUK	9p-Amp	0.209	1
IQCD	22q-Del	0.209	1
IQCD	Del_4p16.1	0.209	1
ALPK2	Amp_11p15.5	0.209	1
ASXL1	12p-Amp	0.209	1
ALG12	8p-Del	0.209	1
C11orf30	9p-Amp	0.209	1
C11orf30	Del_10q21.1	0.209	1
IFT57	22q-Del	0.209	1
IFT57	Del_4p16.1	0.209	1
CDK12	4q-Del	0.209	1
ZNF486	22q-Del	0.209	1
ARID1A	Amp_6p21.1	0.21	1
RNF43	16q-Amp	0.21	1
FAM123B	7q-Amp	0.21	1
FBXW7	7q-Amp	0.21	1
CHUK	Del_15q11.2	0.21	1
TPRKB	Del_22q13.32	0.21	1
NR1H3	4p-Del	0.21	1
C11orf30	Del_15q11.2	0.21	1
PCBP1	4p-Del	0.21	1
SMAD4	Del_4q22.1	0.21	1
FYN	4p-Del	0.21	1
ATM	20p-Del	0.21	1
TP53	Amp_19q12	0.211	1
BCOR	Del_21q21.1	0.211	1
FAM9A	15q-Del	0.211	1
GRB2	Amp_12p13.33	0.211	1
RSPH3	15q-Del	0.211	1
ROS1	Del_10q25.2	0.211	1
BMPR2	Del_21q11.2	0.211	1
Del_8p22	Del_16q23.1	0.211	1
RNF43	21q-Del	0.212	1
NR1H3	Amp_20p11.21	0.212	1
SMAD4	Amp_13q22.1	0.212	1
FYN	18p-Del	0.212	1
MAPK6	Del_1p33	0.213	1
MGA	9p-Amp	0.213	1
ZBTB20	15q-Del	0.213	1
RLIM	Del_10q23.31	0.213	1
C2orf29	Del_1p33	0.213	1
RBBP7	Del_8p23.2	0.213	1
FKBP9	Del_1p33	0.213	1
ATM	Amp_15q26.1	0.213	1
HIST1H1T	20q-Amp	0.213	1
CTNNB1	Amp_8q24.21	0.213	1
12q-Amp	Del_5q12.1	0.213	1
ARID1A	Del_5q12.1	0.214	1
TP53	Del_16q23.1	0.214	1
TXNDC2	Del_17p12	0.214	1
CDH1	4q-Del	0.214	1
NF2	Del_1p33	0.214	1
FBXW7	Del_15q22.33	0.214	1
BCL9	Amp_16p11.2	0.214	1
GRB2	Amp_20q13.12	0.214	1
HLA-A	Del_1p36.11	0.214	1
BMPR2	5q-Del	0.214	1
BMPR2	Amp_2q33.1	0.214	1
BMPR2	Del_3q26.31	0.214	1
NEXN	Del_10q25.2	0.214	1
IDH1	Amp_20q11.21	0.214	1
IDH1	Del_18q21.2	0.214	1
Amp_17q12	Del_4p16.1	0.214	1
FAM123B	4q-Del	0.215	1
B2M	Del_5q23.3	0.215	1
MLH1	4q-Del	0.215	1
GGT1	CREBBP	0.215	1
TPRKB	13q-Amp	0.215	1
ERBB2	Amp_8q24.21	0.215	1
ROS1	Del_4q22.1	0.215	1
RBPJ	Del_5q23.3	0.215	1
RBBP7	Del_5q23.3	0.215	1
TOP2B	Del_15q21.1	0.215	1
HLA-A	Del_5q23.3	0.215	1
GMPS	Del_5q23.3	0.215	1
HIST1H1T	13q-Amp	0.215	1
KDM6A	Amp_5p12	0.215	1
8p-Amp	Del_8p22	0.215	1
FMN2	Del_2q22.1	0.216	1
SELPLG	Del_18q22.1	0.216	1
RHOA	21q-Del	0.216	1
RHOA	Del_5q21.2	0.216	1
FBXW7	Amp_6p21.1	0.216	1
ERBB2	21q-Del	0.216	1
ERBB2	Del_5q21.2	0.216	1
C11orf30	Amp_8p11.21	0.216	1
IFT57	Del_5q21.2	0.216	1
C2orf29	Del_18q22.1	0.216	1
ALDH1A3	Del_22q13.32	0.216	1
ZNF486	21q-Del	0.216	1
APC	8p-Amp	0.217	1
STARD3NL	Amp_17q12	0.217	1
SELPLG	Del_8p22	0.217	1
OR4D10	18q-Del	0.217	1
MAPK6	Del_8p22	0.217	1
P2RY13	ASXL1	0.217	1
NR1H3	Amp_17q12	0.217	1
ASXL1	16q-Amp	0.217	1
PCBP1	Amp_17q12	0.217	1
SMAD4	Del_5q12.1	0.217	1
GPATCH8	Amp_17q12	0.217	1
BIRC3	Amp_17q12	0.217	1
ARID1A	Amp_15q26.1	0.218	1
NF2	Del_1p36.11	0.218	1
ZBTB20	20p-Del	0.218	1
PLAGL2	Amp_13q22.1	0.218	1
MAP4K3	20p-Del	0.218	1
2p-Amp	Del_15q11.2	0.218	1
2q-Amp	Del_15q11.2	0.218	1
6p-Amp	Del_15q11.2	0.218	1
Amp_8p11.23	Del_21q11.2	0.218	1
OR4D10	Del_5q12.1	0.219	1
ERBB2	Amp_13q22.1	0.219	1
PLEKHF2	17p-Del	0.219	1
PLEKHF2	Amp_8p11.21	0.219	1
DDX26B	Del_5q12.1	0.219	1
IDH1	18q-Del	0.219	1
BCOR	Amp_6p21.1	0.22	1
WNT1	20p-Amp	0.22	1
WNT1	Del_8p23.2	0.22	1
NF1	Del_2p12	0.22	1
C11orf30	Del_17q24.3	0.22	1
RLIM	Amp_20q13.12	0.22	1
PTEN	20p-Del	0.22	1
LARP4B	Amp_6p21.1	0.22	1
LARP4B	Del_3p26.3	0.22	1
SETD2	Amp_8q24.21	0.22	1
NF2	Del_5q21.2	0.221	1
ATXN3L	Del_4q22.1	0.221	1
ST3GAL6	Amp_20p11.21	0.221	1
PTCH1	Del_6p25.3	0.221	1
PTCH1	Del_19p13.3	0.221	1
PLAGL2	Amp_13q12.2	0.221	1
DIP2B	15q-Del	0.221	1
DIP2B	Amp_12p13.33	0.221	1
PCBP1	Amp_20q12	0.221	1
PIK3R1	Del_21q11.2	0.221	1
L1TD1	Del_4q22.1	0.221	1
DCLK2	Amp_20q12	0.221	1
LARP4B	15q-Del	0.221	1
NEXN	20p-Amp	0.221	1
NEXN	Del_4q22.1	0.221	1
20p-Amp	5q-Del	0.221	1
Amp_19q12	Del_4q22.1	0.221	1
Amp_20q12	Del_6p25.3	0.221	1
TP53	P2RY13	0.222	1
TP53	PCBP1	0.222	1
TP53	DCLK2	0.222	1
MAPK6	Amp_1q31.1	0.222	1
MAPK6	Amp_17q24.1	0.222	1
MGA	Del_3p14.2	0.222	1
ERBB2	Del_16p13.3	0.222	1
ALPK2	Del_1p36.11	0.222	1
SLC26A8	Amp_1q31.1	0.222	1
FKBP9	Amp_17q24.1	0.222	1
PTEN	4p-Del	0.222	1
ALDH1A3	Amp_1q31.1	0.222	1
ALDH1A3	Amp_17q24.1	0.222	1
CREBBP	Amp_1q31.1	0.222	1
Amp_13q22.1	Del_16q23.1	0.222	1
Amp_17q24.1	Del_16p13.3	0.222	1
FAM123B	Del_12p13.1	0.223	1
ERBB2	Del_15q11.2	0.223	1
RBBP7	Amp_8q24.21	0.223	1
TOP2B	Del_15q15.2	0.223	1
FKBP9	Del_15q22.33	0.223	1
ALDH1A3	Del_15q22.33	0.223	1
CREBBP	Del_16p13.3	0.223	1
12q-Amp	8p-Del	0.223	1
ACVR1B	Del_4q35.1	0.224	1
SMAD2	Del_10q21.1	0.224	1
DDX26B	Amp_8p11.23	0.224	1
BCORL1	14q-Del	0.224	1
13q-Amp	Del_16q23.1	0.224	1
Amp_10q22.3	Amp_13q12.13	0.224	1
ALPK2	Del_4q22.1	0.225	1
TOP2B	22q-Del	0.225	1
12q-Amp	4q-Del	0.225	1
8q-Amp	Del_22q13.32	0.225	1
CDH1	Del_4p16.1	0.226	1
CDH1	Del_10q25.2	0.226	1
Amp_8p11.23	Del_21q21.1	0.226	1
WNT1	Amp_8q24.21	0.227	1
FMN2	Amp_13q12.2	0.227	1
OR4D10	4q-Del	0.227	1
OR4D10	Amp_11p15.5	0.227	1
OR4D10	Del_1p13.2	0.227	1
ERBB2	Amp_17q24.1	0.227	1
ASXL1	21q-Del	0.227	1
PIK3R1	18q-Del	0.227	1
DDX26B	12p-Amp	0.227	1
DDX26B	4q-Del	0.227	1
DDX26B	Del_1p13.2	0.227	1
ASXL1	7q-Amp	0.228	1
RLIM	Del_21q11.2	0.228	1
MPHOSPH10	Del_21q11.2	0.228	1
6p-Amp	17p-Del	0.228	1
ACVR1B	Del_6q26	0.229	1
ACVR1B	Del_19p13.3	0.229	1
BCOR	Del_5q12.1	0.229	1
ATXN3L	8q-Amp	0.229	1
MGA	Del_17q24.3	0.229	1
DIP2B	Del_5q12.1	0.229	1
C2orf29	13q-Amp	0.229	1
SMAD4	13q-Amp	0.229	1
CDK12	IDH1	0.229	1
CDK12	17q-Amp	0.229	1
NEXN	7p-Amp	0.229	1
NEXN	Del_21q21.1	0.229	1
PRPS1	18p-Del	0.229	1
PTGDR	18p-Del	0.229	1
IDH1	Del_5q22.2	0.229	1
KDM6A	Del_6q26	0.229	1
Amp_2q33.1	Del_21q21.1	0.229	1
Amp_13q12.2	Del_16q23.1	0.229	1
TP53	TPRKB	0.23	1
FMN2	8p-Amp	0.23	1
FBXW7	9p-Amp	0.23	1
CHUK	Amp_20p11.21	0.23	1
NLRC4	Del_8p23.2	0.23	1
PTGDR	14q-Del	0.23	1
SELPLG	Del_4q35.1	0.231	1
OR4D10	Del_14q11.2	0.231	1
OR4D10	Del_15q21.1	0.231	1
TPRKB	Del_4q22.1	0.231	1
PLAGL2	Amp_20p11.21	0.231	1
MPHOSPH10	Del_1p33	0.231	1
DDX26B	Del_15q21.1	0.231	1
FKBP9	Del_4q35.1	0.231	1
CRIPAK	Del_21q21.1	0.232	1
B2M	Del_10q23.31	0.232	1
FMN2	Del_10q23.31	0.232	1
MAPK6	Del_10q25.2	0.232	1
RHOA	8p-Del	0.232	1
IQCD	8p-Del	0.232	1
ROS1	22q-Del	0.232	1
ROS1	Del_4p16.1	0.232	1
RBPJ	Del_10q23.31	0.232	1
FKBP9	Del_10q25.2	0.232	1
ALDH1A3	Del_10q25.2	0.232	1
GMPS	Del_10q23.31	0.232	1
ZNF486	8p-Del	0.232	1
CRIPAK	20p-Amp	0.233	1
CRIPAK	Del_8p23.2	0.233	1
NF2	Amp_1q31.1	0.233	1
CHUK	Amp_8p11.23	0.233	1
MVK	4p-Del	0.233	1
BCL9	Del_21q11.2	0.233	1
C11orf30	Amp_8p11.23	0.233	1
BCORL1	Del_21q11.2	0.233	1
GPATCH8	Del_3p14.2	0.233	1
16q-Amp	Del_3p14.2	0.233	1
MLH1	Del_2q22.1	0.234	1
BCOR	Amp_8p11.23	0.234	1
RB1	Amp_8p11.21	0.234	1
FKBP9	8p-Del	0.234	1
ALDH1A3	8p-Del	0.234	1
4p-Del	Amp_12p13.33	0.234	1
Amp_8p11.23	Del_15q11.2	0.234	1
ARID1A	Amp_11p15.5	0.235	1
ARID1A	Del_1p13.2	0.235	1
BCOR	Del_12p13.1	0.235	1
OR4D10	Del_5q23.3	0.235	1
PRKDC	1p-Del	0.235	1
PTCH1	1p-Del	0.235	1
DIP2B	Del_12p13.1	0.235	1
DDX26B	Del_5q23.3	0.235	1
RB1	1p-Del	0.235	1
NEXN	20p-Del	0.235	1
PTGDR	Del_21q11.2	0.235	1
20p-Del	Amp_19q12	0.235	1
CRIPAK	7p-Amp	0.236	1
SOX9	20p-Amp	0.236	1
ZFP36L2	Amp_13q22.1	0.236	1
EGR1	22q-Del	0.236	1
EGR1	Del_4p16.1	0.236	1
ST3GAL6	22q-Del	0.236	1
ST3GAL6	Del_4p16.1	0.236	1
PLEKHF2	Del_4p16.1	0.236	1
PCBP1	Del_18q12.2	0.236	1
2p-Amp	Del_15q21.1	0.236	1
2q-Amp	Del_15q21.1	0.236	1
6p-Amp	18q-Del	0.236	1
6p-Amp	Del_14q11.2	0.236	1
6p-Amp	Del_15q21.1	0.236	1
ARID1A	SMAD2	0.237	1
RNF43	Amp_16p11.2	0.237	1
SOX9	Del_10q21.1	0.237	1
CDH1	8p-Del	0.237	1
SELPLG	17p-Del	0.237	1
TPRKB	Del_21q21.1	0.237	1
P2RY13	Del_15q11.2	0.237	1
PCBP1	Del_15q11.2	0.237	1
PCBP1	Del_17p12	0.237	1
ROS1	Amp_6p21.1	0.237	1
ROS1	Del_3p26.3	0.237	1
L1TD1	Amp_12p13.33	0.237	1
DCLK2	Del_15q11.2	0.237	1
FYN	Del_15q11.2	0.237	1
BIRC3	Del_15q11.2	0.237	1
CREBBP	Amp_16p11.2	0.237	1
12q-Amp	Del_5q23.3	0.237	1
15q-Del	Amp_19q12	0.237	1
Amp_11p15.5	Del_3p14.2	0.237	1
OR4D10	Del_15q15.2	0.238	1
RPTN	Amp_20q11.21	0.238	1
ASXL1	Del_21q21.1	0.238	1
DDX26B	Del_15q15.2	0.238	1
RBPJ	Amp_20q11.21	0.238	1
1p-Del	Amp_20p12.1	0.238	1
CTNNB1	Del_5q12.1	0.239	1
12q-Amp	Del_1p36.11	0.239	1
FMN2	13q-Amp	0.24	1
ZBTB20	Del_10q21.1	0.24	1
NR1H3	7p-Amp	0.24	1
FYN	7p-Amp	0.24	1
GPATCH8	7p-Amp	0.24	1
GPATCH8	8q-Amp	0.24	1
MAP4K3	12q-Amp	0.24	1
MAP4K3	9p-Amp	0.24	1
BIRC3	7p-Amp	0.24	1
IDH1	Del_10q21.1	0.24	1
BCOR	4q-Del	0.241	1
BCOR	Amp_11p15.5	0.241	1
STARD3NL	Del_5q12.1	0.241	1
CHUK	Del_15q21.1	0.241	1
MVK	Amp_17q12	0.241	1
BCL9	Amp_5p12	0.241	1
ERBB2	BMPR2	0.241	1
ERBB2	1p-Del	0.241	1
ERBB2	Del_10q25.2	0.241	1
P2RY13	Del_5q12.1	0.241	1
NR1H3	Del_5q12.1	0.241	1
ALPK2	Amp_10q22.3	0.241	1
C11orf30	Del_15q21.1	0.241	1
DIP2B	4q-Del	0.241	1
DIP2B	Del_5q22.2	0.241	1
PIK3R1	Amp_8p11.23	0.241	1
RLIM	Amp_17q24.1	0.241	1
MPHOSPH10	Amp_1q31.1	0.241	1
MPHOSPH10	Amp_17q24.1	0.241	1
DCLK2	Del_5q12.1	0.241	1
BMPR2	Amp_1q31.1	0.241	1
FYN	Del_5q12.1	0.241	1
LARP4B	Del_1p13.2	0.241	1
GPATCH8	Del_5q12.1	0.241	1
2p-Amp	Del_15q15.2	0.241	1
2q-Amp	Del_15q15.2	0.241	1
6p-Amp	Del_15q15.2	0.241	1
Amp_10q22.3	Amp_17q12	0.241	1
ZFP36L2	Amp_13q12.2	0.242	1
PTCH1	Del_2p12	0.242	1
SMAD4	21q-Del	0.242	1
SMAD4	Amp_2q33.1	0.242	1
RB1	Del_2p12	0.242	1
Amp_16p11.2	Del_6p25.3	0.242	1
APC	Del_6q26	0.243	1
ST3GAL6	21q-Del	0.243	1
PLEKHF2	Del_5q21.2	0.243	1
DIP2B	Del_15q21.1	0.243	1
PIK3R1	Del_8p22	0.243	1
LARP4B	Del_15q21.1	0.243	1
SETD2	Del_5q21.2	0.243	1
HIST1H1T	Amp_12p13.33	0.243	1
ACVR1B	Amp_6p21.1	0.244	1
ACVR1B	Del_3p26.3	0.244	1
ACVR1B	Del_4q22.1	0.244	1
GGT1	20p-Amp	0.244	1
FBXW7	1p-Del	0.244	1
ATXN3L	18p-Del	0.244	1
TPRKB	Del_8p23.2	0.244	1
NEXN	Amp_20p11.21	0.244	1
KDM6A	Amp_6p21.1	0.244	1
KDM6A	Del_3p26.3	0.244	1
Amp_1q31.1	Del_18q12.2	0.244	1
TP53	SLC12A6	0.245	1
FMN2	Amp_2q33.1	0.245	1
PTCH1	VCX2	0.245	1
DDX26B	Del_1p36.11	0.245	1
CRIPAK	Del_18q12.2	0.246	1
FAM9A	Amp_13q12.13	0.246	1
C11orf30	22q-Del	0.246	1
RSPH3	Amp_13q12.13	0.246	1
CDK12	5q-Del	0.246	1
CDK12	Amp_2q33.1	0.246	1
CDK12	Amp_19q12	0.246	1
PRPS1	Del_22q13.32	0.246	1
IDH1	Del_18p11.31	0.246	1
CTNNB1	Del_4p16.1	0.246	1
7p-Amp	Amp_11p15.5	0.246	1
CRIPAK	Amp_8q24.21	0.247	1
SELPLG	Del_4q22.1	0.247	1
MAPK6	Del_4q22.1	0.247	1
ROS1	20p-Del	0.247	1
ROS1	21q-Del	0.247	1
SLC26A8	Del_4q22.1	0.247	1
ALDH1A3	Del_4q22.1	0.247	1
ALPK2	Amp_16p11.2	0.248	1
RB1	Del_4q22.1	0.248	1
ZFP36L2	14q-Del	0.249	1
B2M	14q-Del	0.249	1
STARD3NL	12p-Amp	0.249	1
RPTN	14q-Del	0.249	1
P2RY13	Del_1p13.2	0.249	1
NR1H3	4q-Del	0.249	1
NR1H3	Del_1p13.2	0.249	1
PCBP1	Del_1p13.2	0.249	1
FYN	4q-Del	0.249	1
GPATCH8	Amp_11p15.5	0.249	1
GPATCH8	Del_1p13.2	0.249	1
SETD2	Amp_10q22.3	0.249	1
PTGDR	Del_17p12	0.249	1
BIRC3	4q-Del	0.249	1
BIRC3	Amp_11p15.5	0.249	1
16q-Amp	Amp_11p15.5	0.249	1
16q-Amp	Del_1p13.2	0.249	1
CHUK	Del_15q15.2	0.25	1
C11orf30	Del_15q15.2	0.25	1
SMAD4	12q-Amp	0.25	1
CDK12	Amp_8q24.21	0.25	1
RPTN	Del_1p33	0.251	1
ERBB2	Amp_20p11.21	0.251	1
DIP2B	8p-Del	0.251	1
RLIM	Del_10q25.2	0.251	1
RLIM	Del_15q22.33	0.251	1
MPHOSPH10	Del_10q25.2	0.251	1
RBBP7	Del_1p33	0.251	1
TOP2B	7p-Amp	0.251	1
HLA-A	Del_1p33	0.251	1
12p-Amp	Del_5q12.1	0.251	1
16p-Amp	Del_1p33	0.251	1
BCL9	Del_22q13.32	0.252	1
ZBTB20	Del_17q24.3	0.252	1
DIP2B	IDH1	0.252	1
PCBP1	Amp_20q11.21	0.252	1
RB1	Del_10q23.31	0.252	1
BMPR2	Amp_8q24.21	0.252	1
LARP4B	17q-Amp	0.252	1
BCORL1	Del_22q13.32	0.252	1
SLC12A6	Amp_20p12.1	0.252	1
IDH1	Del_17q24.3	0.252	1
KDM6A	Del_3p14.2	0.252	1
OR4D10	Del_10q23.31	0.253	1
MAPK6	20p-Del	0.253	1
DIP2B	Del_15q15.2	0.253	1
C2orf29	20p-Del	0.253	1
SLC26A8	20p-Del	0.253	1
RB1	Del_3p26.3	0.253	1
FKBP9	20p-Del	0.253	1
PTEN	Del_10q25.2	0.253	1
FAM123B	Del_4q35.1	0.254	1
ACVR1B	Del_21q21.1	0.254	1
ERBB2	13q-Amp	0.254	1
GRB2	Amp_20q12	0.254	1
DIP2B	Del_5q23.3	0.254	1
ATM	Amp_5p12	0.254	1
CTNNB1	Amp_5p12	0.254	1
Amp_19q12	Del_5q22.2	0.254	1
CRIPAK	Amp_13q12.13	0.255	1
TXNDC2	SLC12A6	0.255	1
MAPK6	Del_21q21.1	0.255	1
TPRKB	Del_5q22.2	0.255	1
BCL9	Del_6q26	0.255	1
ASXL1	Del_10q23.31	0.255	1
NLRC4	Del_6q26	0.255	1
NLRC4	Del_19p13.3	0.255	1
ALDH1A3	Del_21q21.1	0.255	1
BCORL1	Del_6q26	0.255	1
BCORL1	Del_19p13.3	0.255	1
CDK12	Amp_8p11.21	0.255	1
Amp_8p11.21	Amp_11p15.5	0.255	1
Amp_8p11.21	Del_1p13.2	0.255	1
NF2	Del_5q12.1	0.256	1
CHUK	21q-Del	0.256	1
CHUK	Del_5q21.2	0.256	1
P2RY13	17p-Del	0.256	1
NLRC4	4p-Del	0.256	1
DCLK2	17p-Del	0.256	1
BMPR2	Del_10q25.2	0.256	1
SLC12A6	4p-Del	0.256	1
BIRC3	17p-Del	0.256	1
FMN2	14q-Del	0.257	1
RPTN	Del_21q11.2	0.257	1
CHUK	Amp_16p11.2	0.257	1
MVK	Del_3p14.2	0.257	1
C11orf30	Amp_16p11.2	0.257	1
PCBP1	Amp_8p11.23	0.257	1
RBPJ	Del_21q11.2	0.257	1
RBBP7	Del_21q11.2	0.257	1
L1TD1	9p-Amp	0.257	1
L1TD1	Del_10q21.1	0.257	1
DCLK2	Amp_8p11.23	0.257	1
HLA-A	Del_21q11.2	0.257	1
NEXN	Del_10q21.1	0.257	1
BIRC3	Amp_8p11.23	0.257	1
12q-Amp	Del_3q26.31	0.257	1
17p-Del	Amp_1q31.1	0.257	1
STARD3NL	Del_5q23.3	0.258	1
EGR1	SMAD4	0.258	1
ST3GAL6	SMAD4	0.258	1
IQCD	Del_8p23.2	0.258	1
NR1H3	Del_5q23.3	0.258	1
C11orf30	Del_1p36.11	0.258	1
PCBP1	Del_5q23.3	0.258	1
DCLK2	Del_5q23.3	0.258	1
FYN	Del_5q23.3	0.258	1
GPATCH8	Del_5q23.3	0.258	1
CTNNB1	17p-Del	0.258	1
Amp_12p13.33	Del_14q11.2	0.258	1
CRIPAK	12p-Amp	0.259	1
CRIPAK	Amp_8p11.23	0.259	1
CRIPAK	Amp_11p15.5	0.259	1
CRIPAK	Del_1p13.2	0.259	1
NF2	1p-Del	0.259	1
RHOA	4p-Del	0.259	1
PRKDC	Del_5q23.3	0.259	1
PCBP1	Del_18p11.31	0.259	1
IFT57	4p-Del	0.259	1
FYN	Del_18p11.31	0.259	1
NEXN	7q-Amp	0.259	1
GMPS	Amp_20p11.21	0.259	1
BIRC3	Del_18p11.31	0.259	1
ZNF486	4p-Del	0.259	1
Amp_10q22.3	Amp_13q12.2	0.259	1
ROS1	Del_2q22.1	0.26	1
ROS1	Del_12p13.1	0.26	1
SMAD4	2p-Amp	0.26	1
SMAD4	2q-Amp	0.26	1
Del_12p13.1	Del_16q23.1	0.26	1
ZFP36L2	Amp_17q24.1	0.261	1
B2M	Amp_1q31.1	0.261	1
FMN2	18p-Del	0.261	1
RPTN	Amp_1q31.1	0.261	1
SMAD4	Amp_12p13.33	0.261	1
HLA-A	Amp_1q31.1	0.261	1
HLA-A	Amp_17q24.1	0.261	1
GMPS	Amp_1q31.1	0.261	1
GMPS	Amp_17q24.1	0.261	1
Amp_20q11.21	Del_6p25.3	0.261	1
BCL9	Del_15q22.33	0.262	1
ALG12	Amp_20q13.12	0.262	1
NLRC4	Del_15q22.33	0.262	1
PLAGL2	8p-Del	0.262	1
MLH1	Del_17q24.3	0.263	1
RPTN	Del_18q12.2	0.263	1
DIP2B	Del_1p36.11	0.263	1
CREBBP	4q-Del	0.263	1
CREBBP	Del_1p13.2	0.263	1
CRIPAK	17q-Amp	0.264	1
SOX9	Amp_20p11.21	0.264	1
STARD3NL	Del_14q11.2	0.264	1
SELPLG	Amp_12p13.33	0.264	1
FAM9A	Amp_8p11.21	0.264	1
P2RY13	Del_15q21.1	0.264	1
ALG12	Del_15q11.2	0.264	1
PCBP1	Del_15q21.1	0.264	1
RSPH3	Amp_8p11.21	0.264	1
RB1	Amp_13q22.1	0.264	1
DCLK2	Del_14q11.2	0.264	1
DCLK2	Del_15q21.1	0.264	1
FKBP9	15q-Del	0.264	1
FKBP9	Amp_12p13.33	0.264	1
C14orf184	Del_15q11.2	0.264	1
FYN	Del_14q11.2	0.264	1
BIRC3	Del_15q21.1	0.264	1
KDM6A	Amp_12p13.33	0.264	1
PRKDC	Del_8q11.1	0.265	1
MVK	Del_5q12.1	0.265	1
ERBB2	Del_15q21.1	0.265	1
PRRG1	Del_5q12.1	0.265	1
PIK3R1	Del_6p25.3	0.265	1
PIK3R1	Del_6q26	0.265	1
PTEN	Del_7q31.1	0.265	1
PRPS1	Del_18p11.31	0.265	1
PTGDR	Del_18p11.31	0.265	1
KDM6A	Del_5q12.1	0.265	1
Amp_1q31.1	Del_15q21.1	0.265	1
CDH1	Amp_16p11.2	0.266	1
OR4D10	Del_18q22.1	0.266	1
CDK12	14q-Del	0.266	1
ZFP36L2	20q-Amp	0.267	1
RHOA	Amp_17q12	0.267	1
FAM9A	22q-Del	0.267	1
FAM9A	Del_4p16.1	0.267	1
ZBTB20	Del_15q11.2	0.267	1
GRB2	22q-Del	0.267	1
IFT57	Amp_17q12	0.267	1
RSPH3	Del_4p16.1	0.267	1
ROS1	4q-Del	0.267	1
ROS1	Amp_11p15.5	0.267	1
ROS1	Del_1p13.2	0.267	1
IDH1	Del_15q11.2	0.267	1
ZNF486	Amp_17q12	0.267	1
12p-Amp	Del_1p13.2	0.267	1
17q-Amp	Del_15q11.2	0.267	1
MAPK6	7p-Amp	0.268	1
RHOA	Amp_8q24.21	0.268	1
SLC26A8	8q-Amp	0.268	1
FKBP9	8q-Amp	0.268	1
ALDH1A3	7p-Amp	0.268	1
ALDH1A3	8q-Amp	0.268	1
BCORL1	7q-Amp	0.268	1
PRPS1	Del_4q22.1	0.268	1
22q-Del	Amp_20p11.21	0.268	1
ARID1A	Del_15q15.2	0.269	1
CRIPAK	Del_15q21.1	0.269	1
ACVR1B	7p-Amp	0.269	1
ACVR1B	8q-Amp	0.269	1
BCOR	5q-Del	0.269	1
BCOR	Amp_2q33.1	0.269	1
BCOR	Amp_19q12	0.269	1
DIP2B	5q-Del	0.269	1
DIP2B	Amp_2q33.1	0.269	1
L1TD1	Del_17q24.3	0.269	1
LARP4B	5q-Del	0.269	1
LARP4B	Amp_2q33.1	0.269	1
NEXN	Del_17q24.3	0.269	1
TXNDC2	Amp_5p12	0.27	1
SMAD2	22q-Del	0.27	1
PIK3R1	Amp_17q12	0.27	1
Amp_5p12	Del_6q26	0.27	1
Amp_8p11.23	Amp_11p15.5	0.27	1
APC	NR1H3	0.271	1
NF2	8q-Amp	0.271	1
MAPK6	Del_8p23.2	0.271	1
BCL9	Amp_6p21.1	0.271	1
BCL9	Del_3p26.3	0.271	1
P2RY13	Del_15q15.2	0.271	1
NLRC4	Del_3p26.3	0.271	1
PCBP1	Del_15q15.2	0.271	1
PIK3R1	7q-Amp	0.271	1
PIK3R1	Del_10q25.2	0.271	1
C2orf29	20p-Amp	0.271	1
RBPJ	Del_10q25.2	0.271	1
DCLK2	Del_15q15.2	0.271	1
BMPR2	16p-Amp	0.271	1
BCORL1	Del_3p26.3	0.271	1
GMPS	Del_10q25.2	0.271	1
BIRC3	Del_15q15.2	0.271	1
CTNNB1	Amp_1q31.1	0.271	1
CTNNB1	Amp_17q24.1	0.271	1
6p-Amp	14q-Del	0.271	1
Amp_16p11.2	Del_3p14.2	0.271	1
TP53	MGA	0.272	1
TP53	CDK12	0.272	1
FAM123B	5q-Del	0.272	1
FAM123B	Del_3q26.31	0.272	1
MLH1	Del_3q26.31	0.272	1
NLRC4	Del_4q35.1	0.272	1
PLAGL2	Del_8p22	0.272	1
PIK3R1	Del_17p12	0.272	1
RLIM	20p-Del	0.272	1
MPHOSPH10	20p-Del	0.272	1
RB1	16p-Amp	0.272	1
BCORL1	Del_4q35.1	0.272	1
SLC12A6	Del_4q35.1	0.272	1
APC	BMPR2	0.273	1
OR4D10	Del_1p33	0.273	1
RHOA	Amp_20p12.1	0.273	1
RPTN	Del_22q13.32	0.273	1
MVK	Del_15q11.2	0.273	1
IQCD	Amp_20p12.1	0.273	1
IFT57	Amp_20p12.1	0.273	1
RSPH3	Amp_13q22.1	0.273	1
FAM9A	21q-Del	0.274	1
FAM9A	Del_5q21.2	0.274	1
EGR1	8p-Del	0.274	1
THOC7	21q-Del	0.274	1
MVK	4q-Del	0.274	1
MVK	Amp_11p15.5	0.274	1
MVK	Del_1p13.2	0.274	1
PLEKHF2	8p-Del	0.274	1
GRB2	21q-Del	0.274	1
PRRG1	Amp_11p15.5	0.274	1
VCX2	8p-Del	0.274	1
PTGDR	Del_21q21.1	0.274	1
CTNNB1	Del_2p12	0.274	1
13q-Amp	Del_6p25.3	0.274	1
Amp_10q22.3	Amp_11p15.5	0.274	1
FAM123B	18p-Del	0.275	1
FMN2	22q-Del	0.275	1
ATXN3L	Del_17p12	0.275	1
P2RY13	Del_8p22	0.275	1
NR1H3	Del_8p22	0.275	1
RLIM	Del_4q22.1	0.275	1
SMAD4	Amp_6p21.1	0.275	1
Amp_19q12	Del_17p12	0.275	1
TP53	2p-Amp	0.276	1
TXNDC2	14q-Del	0.276	1
CDH1	20p-Del	0.276	1
NF2	12p-Amp	0.276	1
MAPK6	Del_10q21.1	0.276	1
ERBB2	Del_15q15.2	0.276	1
C2orf29	Del_10q21.1	0.276	1
SLC26A8	9p-Amp	0.276	1
FKBP9	12q-Amp	0.276	1
FKBP9	9p-Amp	0.276	1
ALDH1A3	Del_10q21.1	0.276	1
ATM	Del_1p36.11	0.276	1
Amp_1q31.1	Del_15q15.2	0.276	1
RNF43	Amp_5p12	0.277	1
ACVR1B	ZBTB20	0.277	1
MGA	Del_5q21.2	0.277	1
RSPH3	17p-Del	0.277	1
C2orf29	Amp_13q22.1	0.277	1
DCLK2	Del_10q23.31	0.277	1
GPATCH8	Del_10q23.31	0.277	1
KDM6A	12p-Amp	0.277	1
KDM6A	17q-Amp	0.277	1
17q-Amp	Del_16q23.1	0.277	1
2p-Amp	Del_21q11.2	0.277	1
2q-Amp	Del_21q11.2	0.277	1
8q-Amp	Del_21q11.2	0.277	1
Amp_11p15.5	Del_16q23.1	0.277	1
P2RY13	Del_1p36.11	0.278	1
RSPH3	Amp_13q12.2	0.278	1
DCLK2	Del_1p36.11	0.278	1
PTGDR	Del_8p22	0.278	1
Amp_12p13.33	Del_5q21.2	0.278	1
CRIPAK	Del_15q15.2	0.279	1
PRKDC	Amp_8q24.21	0.279	1
ALPK2	Del_5q22.2	0.279	1
PLAGL2	13q-Amp	0.279	1
IDH1	13q-Amp	0.279	1
CTNNB1	Del_17q24.3	0.279	1
CRIPAK	8p-Del	0.28	1
TP53	ALPK2	0.28	1
SMAD2	21q-Del	0.28	1
PLEKHF2	8p-Amp	0.28	1
PCBP1	20q-Amp	0.28	1
DCLK2	20q-Amp	0.28	1
LARP4B	Del_10q23.31	0.28	1
PTGDR	Amp_12p13.33	0.28	1
15q-Del	Amp_17q24.1	0.28	1
ARID1A	Del_4q22.1	0.281	1
CRIPAK	Del_18q22.1	0.281	1
OR4D10	14q-Del	0.281	1
MAPK6	Del_5q22.2	0.281	1
RBBP7	Del_15q22.33	0.281	1
FKBP9	Del_5q22.2	0.281	1
CREBBP	16p-Amp	0.281	1
CREBBP	Del_8q11.1	0.281	1
12p-Amp	Del_4p16.1	0.281	1
Amp_11p15.5	Del_4p16.1	0.281	1
CRIPAK	NEXN	0.282	1
CRIPAK	Amp_19q12	0.282	1
CDH1	Del_10q23.31	0.282	1
PRKDC	Amp_15q26.1	0.282	1
ATM	Del_5q23.3	0.282	1
Amp_11p15.5	Del_15q21.1	0.282	1
SOX9	PRRG1	0.283	1
SOX9	Amp_10q22.3	0.283	1
CDH1	Amp_19q12	0.283	1
CDH1	Del_3q26.31	0.283	1
WNT1	Del_14q11.2	0.283	1
OR4D10	Amp_1q31.1	0.283	1
OR4D10	Amp_17q24.1	0.283	1
RHOA	Del_3p14.2	0.283	1
RPTN	Amp_20p12.1	0.283	1
MGA	Del_4q22.1	0.283	1
MVK	Del_5q23.3	0.283	1
ALG12	Del_14q11.2	0.283	1
ALG12	Del_15q21.1	0.283	1
GRB2	Amp_20q11.21	0.283	1
DDX26B	Amp_17q24.1	0.283	1
RBBP7	Amp_20p12.1	0.283	1
C14orf184	Del_14q11.2	0.283	1
C14orf184	Del_15q21.1	0.283	1
ZNF486	Del_3p14.2	0.283	1
PTCH1	Del_5q12.1	0.284	1
PCBP1	18q-Del	0.284	1
RLIM	Del_21q21.1	0.284	1
C2orf29	Amp_8q24.21	0.284	1
SLC26A8	Amp_8q24.21	0.284	1
CDK12	1p-Del	0.284	1
ATM	Del_8p23.2	0.284	1
TXNDC2	Del_6p25.3	0.285	1
TXNDC2	Del_6q26	0.285	1
TXNDC2	Del_19p13.3	0.285	1
NF2	Del_4q22.1	0.285	1
ERBB2	Amp_8p11.21	0.285	1
C11orf30	Amp_5p12	0.285	1
RLIM	17p-Del	0.285	1
TOP2B	Del_6q26	0.285	1
Amp_12p13.33	Del_17p12	0.285	1
Amp_16p11.2	Del_15q11.2	0.285	1
FAM123B	Del_4q22.1	0.286	1
ACVR1B	Amp_8p11.23	0.286	1
ACVR1B	Del_5q22.2	0.286	1
FMN2	PTGDR	0.286	1
FMN2	Del_7q31.1	0.286	1
PRRG1	7p-Amp	0.286	1
PTGDR	Del_18q22.1	0.286	1
Amp_8p11.23	Del_16q23.1	0.286	1
TXNDC2	8p-Amp	0.287	1
NLRC4	Del_12p13.1	0.287	1
PTEN	Del_1p33	0.287	1
BMPR2	20p-Del	0.287	1
BCORL1	Del_12p13.1	0.287	1
8p-Amp	Del_18p11.31	0.287	1
8p-Amp	Del_19p13.3	0.287	1
Amp_12p13.33	Del_22q13.32	0.287	1
ZFP36L2	Del_17p12	0.288	1
SELPLG	Del_17q24.3	0.288	1
EGR1	4p-Del	0.288	1
ST3GAL6	4p-Del	0.288	1
ASXL1	Del_8p22	0.288	1
ALG12	Del_15q15.2	0.288	1
DIP2B	Del_16p13.3	0.288	1
C2orf29	Del_17q24.3	0.288	1
SLC26A8	Del_17q24.3	0.288	1
C14orf184	Del_15q15.2	0.288	1
ALDH1A3	Del_17q24.3	0.288	1
CREBBP	Amp_5p12	0.288	1
CTNNB1	Del_5q23.3	0.288	1
2p-Amp	Del_22q13.32	0.288	1
2q-Amp	Del_22q13.32	0.288	1
Amp_15q26.1	Del_22q13.32	0.288	1
Amp_20p11.21	Del_22q13.32	0.288	1
NF2	Del_8q11.1	0.289	1
FBXW7	8p-Del	0.289	1
RBPJ	Del_4q35.1	0.289	1
RBBP7	Del_4q35.1	0.289	1
HLA-A	Del_4q35.1	0.289	1
Del_16q23.1	Del_17p12	0.289	1
MLH1	4p-Del	0.29	1
ZBTB20	Amp_16p11.2	0.29	1
ALPK2	Del_1p33	0.29	1
BMPR2	Del_21q21.1	0.29	1
MAP4K3	Amp_16p11.2	0.29	1
IDH1	Amp_16p11.2	0.29	1
Amp_20p12.1	Del_1p33	0.29	1
APC	Del_2p12	0.291	1
CDH1	Del_22q13.32	0.291	1
RHOA	Del_5q12.1	0.292	1
MGA	Amp_8q24.21	0.292	1
BCL9	Del_3p14.2	0.292	1
BCL9	Del_4q22.1	0.292	1
NLRC4	Del_3p14.2	0.292	1
IFT57	Del_5q12.1	0.292	1
CTNNB1	15q-Del	0.292	1
Amp_13q22.1	Del_6p25.3	0.292	1
B2M	20p-Del	0.293	1
WNT1	Del_1p36.11	0.293	1
OR4D10	Del_10q25.2	0.293	1
RHOA	20q-Amp	0.293	1
RPTN	20p-Del	0.293	1
THOC7	Amp_20p11.21	0.293	1
ATXN3L	Amp_20q11.21	0.293	1
ALG12	Del_1p36.11	0.293	1
GRB2	Amp_20p11.21	0.293	1
RSPH3	18p-Del	0.293	1
RSPH3	Amp_20p11.21	0.293	1
RBBP7	20p-Del	0.293	1
HLA-A	20p-Del	0.293	1
GMPS	20p-Del	0.293	1
CREBBP	2q-Amp	0.293	1
2p-Amp	Del_15q22.33	0.293	1
2q-Amp	Del_15q22.33	0.293	1
6p-Amp	Del_15q22.33	0.293	1
Del_5q22.2	Del_7q31.1	0.293	1
FMN2	Del_5q21.2	0.294	1
IFT57	Amp_13q12.13	0.294	1
ATM	Del_8p22	0.294	1
Amp_8p11.23	Amp_10q22.3	0.294	1
ACVR1B	5q-Del	0.295	1
PRKDC	Del_6q26	0.295	1
FBXW7	21q-Del	0.295	1
MAP4K3	22q-Del	0.295	1
MAP4K3	Del_4p16.1	0.295	1
IDH1	Del_4p16.1	0.295	1
KDM6A	5q-Del	0.295	1
KDM6A	Amp_19q12	0.295	1
KDM6A	Del_3q26.31	0.295	1
Amp_11p15.5	Del_15q15.2	0.295	1
Amp_19q12	Del_16q23.1	0.295	1
ERBB2	8q-Amp	0.296	1
P2RY13	Del_1p33	0.296	1
ST3GAL6	Amp_17q12	0.296	1
PLEKHF2	Amp_17q12	0.296	1
ALPK2	VCX2	0.296	1
PCBP1	Del_1p33	0.296	1
RLIM	Del_10q21.1	0.296	1
MPHOSPH10	Del_10q21.1	0.296	1
VCX2	Amp_17q12	0.296	1
SMAD4	Del_1p33	0.296	1
FYN	Del_1p33	0.296	1
GPATCH8	Del_1p33	0.296	1
BIRC3	Del_1p33	0.296	1
12q-Amp	1p-Del	0.296	1
16q-Amp	Del_1p33	0.296	1
8p-Amp	Del_14q11.2	0.296	1
8p-Amp	Del_15q21.1	0.296	1
9p-Amp	1p-Del	0.296	1
Amp_11p15.5	Del_5q21.2	0.296	1
PTCH1	Amp_16p11.2	0.297	1
ROS1	Amp_8p11.21	0.297	1
ALG12	Amp_20q12	0.298	1
20q-Amp	Del_6p25.3	0.298	1
NF2	2p-Amp	0.299	1
NF2	2q-Amp	0.299	1
FBXW7	Amp_5p12	0.299	1
ALPK2	Del_21q11.2	0.299	1
ASXL1	Del_21q11.2	0.299	1
SETD2	Del_5q22.2	0.299	1
CTNNB1	Del_15q21.1	0.299	1
ARID1A	5q-Del	0.3	1
ARID1A	Amp_2q33.1	0.3	1
ARID1A	Amp_19q12	0.3	1
TXNDC2	Amp_6p21.1	0.3	1
CHUK	Del_6q26	0.3	1
C11orf30	Del_6q26	0.3	1
TOP2B	Amp_6p21.1	0.3	1
TOP2B	Del_3p26.3	0.3	1
C14orf184	17p-Del	0.3	1
NEXN	Del_15q11.2	0.3	1
Amp_19q12	Del_15q11.2	0.3	1
TXNDC2	Del_18q21.2	0.301	1
RHOA	4q-Del	0.301	1
RHOA	Del_1p13.2	0.301	1
FBXW7	20p-Del	0.301	1
TPRKB	22q-Del	0.301	1
TPRKB	Del_4p16.1	0.301	1
MVK	Del_15q21.1	0.301	1
ZBTB20	Del_15q21.1	0.301	1
IQCD	Amp_11p15.5	0.301	1
IQCD	Del_1p13.2	0.301	1
PRRG1	Del_14q11.2	0.301	1
IFT57	4q-Del	0.301	1
IFT57	Amp_11p15.5	0.301	1
IFT57	Del_1p13.2	0.301	1
HIST1H1T	Del_4p16.1	0.301	1
IDH1	Del_15q21.1	0.301	1
ZNF486	4q-Del	0.301	1
ZNF486	Amp_11p15.5	0.301	1
ZNF486	Del_1p13.2	0.301	1
17q-Amp	Del_15q21.1	0.301	1
9p-Amp	22q-Del	0.301	1
9p-Amp	Del_4p16.1	0.301	1
APC	Amp_1q31.1	0.302	1
MVK	Del_10q23.31	0.302	1
PRRG1	Del_10q23.31	0.302	1
PTEN	5q-Del	0.302	1
PRPS1	Amp_20q11.21	0.302	1
ATM	4p-Del	0.302	1
Del_16q23.1	Del_18q12.2	0.302	1
PRKDC	Del_10q23.31	0.303	1
BCL9	Del_21q21.1	0.303	1
SMAD4	FYN	0.303	1
SLC12A6	Del_21q21.1	0.303	1
17p-Del	Del_16q23.1	0.303	1
BCL9	17q-Amp	0.304	1
BCL9	Del_5q12.1	0.304	1
NLRC4	Del_5q12.1	0.304	1
VCX2	SETD2	0.304	1
BCORL1	17q-Amp	0.304	1
BCORL1	Del_5q12.1	0.304	1
SLC12A6	17q-Amp	0.304	1
CDK12	Del_10q25.2	0.304	1
TXNDC2	Del_22q13.32	0.305	1
OR4D10	Del_22q13.32	0.305	1
ZBTB20	21q-Del	0.305	1
ZBTB20	Del_5q21.2	0.305	1
PLAGL2	20p-Amp	0.305	1
PLAGL2	Del_8p23.2	0.305	1
DDX26B	Del_22q13.32	0.305	1
MAP4K3	21q-Del	0.305	1
MAP4K3	Del_5q21.2	0.305	1
IDH1	21q-Del	0.305	1
IDH1	Del_5q21.2	0.305	1
17q-Amp	Del_5q21.2	0.305	1
8q-Amp	Del_7q31.1	0.305	1
TP53	SELPLG	0.306	1
TP53	ALDH1A3	0.306	1
FAM123B	PRPS1	0.306	1
B2M	Del_4q22.1	0.306	1
MLH1	Del_7q31.1	0.306	1
ERBB2	12q-Amp	0.306	1
RBBP7	Del_4q22.1	0.306	1
HLA-A	Del_4q22.1	0.306	1
4p-Del	Amp_8p11.23	0.306	1
Amp_17q24.1	Del_5q22.2	0.306	1
APC	9p-Amp	0.307	1
STARD3NL	Amp_17q24.1	0.307	1
P2RY13	Amp_1q31.1	0.307	1
NR1H3	Amp_17q24.1	0.307	1
PCBP1	Amp_1q31.1	0.307	1
PCBP1	Amp_17q24.1	0.307	1
DCLK2	Amp_1q31.1	0.307	1
DCLK2	Amp_17q24.1	0.307	1
FYN	Amp_1q31.1	0.307	1
FYN	Amp_17q24.1	0.307	1
GPATCH8	Amp_1q31.1	0.307	1
GPATCH8	Amp_17q24.1	0.307	1
TP53	LARP4B	0.308	1
BCOR	1p-Del	0.308	1
PRKDC	Del_5q22.2	0.308	1
ATXN3L	Amp_16p11.2	0.308	1
TPRKB	21q-Del	0.308	1
TPRKB	Del_5q21.2	0.308	1
RLIM	Del_17q24.3	0.308	1
MPHOSPH10	Del_17q24.3	0.308	1
RBBP7	8p-Del	0.308	1
L1TD1	Amp_16p11.2	0.308	1
PTEN	Del_8p22	0.308	1
LARP4B	1p-Del	0.308	1
FAM123B	ACVR1B	0.309	1
BCOR	Del_1p33	0.309	1
MVK	Del_15q15.2	0.309	1
ALPK2	Amp_1q31.1	0.309	1
ASXL1	Amp_1q31.1	0.309	1
PTCH1	Del_1p33	0.309	1
PTEN	Del_10q21.1	0.309	1
LARP4B	Del_1p33	0.309	1
Del_1p33	Del_17q24.3	0.309	1
ARID1A	Amp_8p11.21	0.31	1
TP53	GRB2	0.31	1
SOX9	IFT57	0.31	1
SOX9	Amp_16p11.2	0.31	1
CDH1	Del_2p12	0.31	1
RHOA	Del_5q23.3	0.31	1
C11orf30	8p-Amp	0.31	1
IFT57	Del_5q23.3	0.31	1
PTEN	Del_5q22.2	0.31	1
8p-Amp	Del_3p26.3	0.31	1
Amp_8p11.21	Del_15q11.2	0.31	1
APC	BCORL1	0.311	1
FAM123B	Del_1p33	0.311	1
TXNDC2	Amp_17q12	0.311	1
ALPK2	Del_6p25.3	0.311	1
ASXL1	Del_6p25.3	0.311	1
ASXL1	Del_6q26	0.311	1
ASXL1	Del_19p13.3	0.311	1
RLIM	Amp_20q11.21	0.311	1
ROS1	5q-Del	0.311	1
ROS1	Amp_2q33.1	0.311	1
RB1	Amp_8q24.21	0.311	1
IDH1	Del_15q15.2	0.311	1
17q-Amp	Del_15q15.2	0.311	1
2p-Amp	Del_4q22.1	0.311	1
2q-Amp	Del_4q22.1	0.311	1
Amp_16p11.2	Del_5q22.2	0.311	1
ZFP36L2	Amp_20q13.12	0.312	1
RLIM	8q-Amp	0.312	1
RB1	4q-Del	0.312	1
8q-Amp	1p-Del	0.312	1
ZFP36L2	Del_18p11.31	0.313	1
ROS1	Del_15q22.33	0.313	1
VCX2	Del_3p14.2	0.313	1
PTEN	Del_8q11.1	0.313	1
6p-Amp	18p-Del	0.313	1
Amp_5p12	Del_3p14.2	0.313	1
ACVR1B	ALDH1A3	0.314	1
ACVR1B	Del_16p13.3	0.314	1
OR4D10	Del_15q22.33	0.314	1
RHOA	Del_15q11.2	0.314	1
BCL9	Amp_12p13.33	0.314	1
IQCD	Del_15q11.2	0.314	1
NLRC4	15q-Del	0.314	1
NLRC4	Amp_12p13.33	0.314	1
C11orf30	Del_21q11.2	0.314	1
PIK3R1	Del_4p16.1	0.314	1
C2orf29	Del_16q23.1	0.314	1
RB1	4p-Del	0.314	1
ZNF486	Del_15q11.2	0.314	1
RBPJ	Del_21q21.1	0.315	1
RBBP7	Del_21q21.1	0.315	1
HLA-A	Del_21q21.1	0.315	1
CREBBP	Del_6p25.3	0.315	1
CREBBP	Del_19p13.3	0.315	1
16p-Amp	Del_21q21.1	0.315	1
CRIPAK	18q-Del	0.316	1
OR4D10	20p-Del	0.316	1
NF1	5q-Del	0.316	1
NF1	Amp_19q12	0.316	1
BCL9	Del_15q11.2	0.316	1
C11orf30	Amp_6p21.1	0.316	1
C11orf30	Del_3p26.3	0.316	1
PRRG1	Del_1p36.11	0.316	1
DDX26B	20p-Del	0.316	1
RB1	Del_4q35.1	0.316	1
BMPR2	Amp_8p11.21	0.316	1
BCORL1	Del_15q11.2	0.316	1
Amp_10q22.3	Del_1p36.11	0.316	1
ZFP36L2	9p-Amp	0.317	1
ZFP36L2	18q-Del	0.317	1
B2M	9p-Amp	0.317	1
SMAD2	Del_6q26	0.317	1
STARD3NL	14q-Del	0.317	1
RPTN	18q-Del	0.317	1
BCL9	Amp_11p15.5	0.317	1
NLRC4	12p-Amp	0.317	1
PCBP1	14q-Del	0.317	1
PCBP1	Del_10q25.2	0.317	1
RBBP7	9p-Amp	0.317	1
DCLK2	14q-Del	0.317	1
DCLK2	Del_10q25.2	0.317	1
HLA-A	12q-Amp	0.317	1
HLA-A	9p-Amp	0.317	1
BMPR2	16q-Amp	0.317	1
FYN	14q-Del	0.317	1
BCORL1	Amp_11p15.5	0.317	1
BCORL1	Del_1p13.2	0.317	1
GPATCH8	Del_10q25.2	0.317	1
SLC12A6	Amp_11p15.5	0.317	1
GMPS	9p-Amp	0.317	1
GMPS	Del_10q21.1	0.317	1
BIRC3	14q-Del	0.317	1
12q-Amp	Del_8q11.1	0.317	1
16p-Amp	Del_10q21.1	0.317	1
16q-Amp	Del_10q25.2	0.317	1
2p-Amp	Del_21q21.1	0.317	1
2q-Amp	Del_21q21.1	0.317	1
6p-Amp	Del_21q21.1	0.317	1
ACVR1B	Del_10q23.31	0.318	1
RSPH3	Del_17p12	0.318	1
Del_1p36.11	Del_16q23.1	0.318	1
RNF43	Del_2q22.1	0.319	1
BCOR	Amp_8p11.21	0.319	1
FAM9A	4p-Del	0.319	1
ZBTB20	Amp_5p12	0.319	1
ASXL1	4p-Del	0.319	1
GRB2	4p-Del	0.319	1
RSPH3	4p-Del	0.319	1
LARP4B	Amp_8p11.21	0.319	1
MAP4K3	Amp_5p12	0.319	1
PTGDR	Del_8p23.2	0.319	1
ATM	Del_5q21.2	0.319	1
7p-Amp	Del_10q21.1	0.319	1
4p-Del	Amp_17q12	0.319	1
Del_3p14.2	Del_5q22.2	0.319	1
ARID1A	Del_2p12	0.32	1
WNT1	14q-Del	0.32	1
BCL9	13q-Amp	0.32	1
ALG12	14q-Del	0.32	1
PLAGL2	Del_15q11.2	0.32	1
SMAD4	Del_4p16.1	0.32	1
PTEN	Del_10q23.31	0.32	1
C14orf184	14q-Del	0.32	1
MAP4K3	Del_1p36.11	0.32	1
IDH1	Del_1p36.11	0.32	1
CTNNB1	Del_3p26.3	0.32	1
CRIPAK	1p-Del	0.321	1
THOC7	8p-Del	0.321	1
MGA	VCX2	0.321	1
ST3GAL6	Del_5q12.1	0.321	1
PLEKHF2	Del_5q12.1	0.321	1
RSPH3	8p-Del	0.321	1
NEXN	Del_4p16.1	0.321	1
CREBBP	4p-Del	0.321	1
22q-Del	Amp_2q33.1	0.321	1
22q-Del	Amp_19q12	0.321	1
Amp_2q33.1	Del_4p16.1	0.321	1
MVK	Del_1p33	0.322	1
BCL9	Amp_2q33.1	0.322	1
ALG12	Amp_20q11.21	0.322	1
NLRC4	5q-Del	0.322	1
NLRC4	Amp_2q33.1	0.322	1
NLRC4	Amp_19q12	0.322	1
BMPR2	9p-Amp	0.322	1
BCORL1	5q-Del	0.322	1
BCORL1	Amp_2q33.1	0.322	1
BCORL1	Amp_19q12	0.322	1
SLC12A6	5q-Del	0.322	1
SLC12A6	Amp_2q33.1	0.322	1
SLC12A6	Amp_19q12	0.322	1
Amp_10q22.3	Del_1p33	0.322	1
TXNDC2	Del_18q22.1	0.323	1
BCOR	Del_4p16.1	0.323	1
BCOR	Del_8p23.2	0.323	1
STARD3NL	Amp_8p11.21	0.323	1
FBXW7	2p-Amp	0.323	1
FBXW7	Amp_15q26.1	0.323	1
NR1H3	Amp_8p11.21	0.323	1
SETD2	Del_6q26	0.323	1
NEXN	Del_8p22	0.323	1
2p-Amp	15q-Del	0.323	1
2q-Amp	15q-Del	0.323	1
6p-Amp	15q-Del	0.323	1
22q-Del	Amp_8p11.21	0.323	1
Amp_8p11.23	Del_15q15.2	0.323	1
Amp_8p11.21	Del_4p16.1	0.323	1
FAM123B	Amp_8p11.23	0.324	1
BCOR	Amp_1q31.1	0.324	1
OR4D10	Amp_20p11.21	0.324	1
PRKDC	Del_3p26.3	0.324	1
RPTN	Amp_12p13.33	0.324	1
ST3GAL6	7q-Amp	0.324	1
PLEKHF2	7q-Amp	0.324	1
DIP2B	Amp_1q31.1	0.324	1
PIK3R1	18p-Del	0.324	1
RBBP7	Amp_12p13.33	0.324	1
SETD2	Amp_1q31.1	0.324	1
NEXN	Amp_8p11.21	0.324	1
GMPS	Amp_12p13.33	0.324	1
APC	12p-Amp	0.325	1
FAM123B	22q-Del	0.325	1
NR1H3	Del_21q11.2	0.325	1
ALG12	Del_21q11.2	0.325	1
PCBP1	Del_21q11.2	0.325	1
RB1	17q-Amp	0.325	1
DCLK2	Del_21q11.2	0.325	1
C14orf184	Del_21q11.2	0.325	1
GPATCH8	Del_21q11.2	0.325	1
PRPS1	20q-Amp	0.325	1
SOX9	Del_4q22.1	0.326	1
FMN2	Del_5q12.1	0.326	1
NF2	Del_6p25.3	0.326	1
ATXN3L	Amp_8p11.23	0.326	1
ST3GAL6	20p-Amp	0.326	1
PLEKHF2	20p-Amp	0.326	1
PLEKHF2	Del_8p23.2	0.326	1
NEXN	Amp_8p11.23	0.326	1
Amp_10q22.3	Del_18p11.31	0.326	1
Amp_16p11.2	Del_15q21.1	0.326	1
Amp_20p11.21	Del_1p33	0.326	1
SELPLG	Amp_16p11.2	0.327	1
IFT57	Amp_13q22.1	0.327	1
C2orf29	Amp_16p11.2	0.327	1
SLC26A8	Amp_16p11.2	0.327	1
TOP2B	20p-Amp	0.327	1
FKBP9	Amp_16p11.2	0.327	1
ALDH1A3	Amp_16p11.2	0.327	1
CRIPAK	Del_1p33	0.328	1
CDH1	Amp_5p12	0.328	1
STARD3NL	20p-Amp	0.328	1
FAM9A	Amp_17q12	0.328	1
THOC7	Amp_17q12	0.328	1
ATXN3L	20q-Amp	0.328	1
P2RY13	Del_8p23.2	0.328	1
NR1H3	Del_8p23.2	0.328	1
ALPK2	Del_2q22.1	0.328	1
ALPK2	Del_22q13.32	0.328	1
ASXL1	Del_10q25.2	0.328	1
ASXL1	Del_22q13.32	0.328	1
GRB2	Amp_17q12	0.328	1
DCLK2	20p-Amp	0.328	1
DCLK2	Del_8p23.2	0.328	1
ATM	7q-Amp	0.328	1
IDH1	20p-Amp	0.328	1
GMNN	8p-Del	0.328	1
B2M	Del_17q24.3	0.329	1
MLH1	1p-Del	0.329	1
FMN2	6p-Amp	0.329	1
FMN2	Amp_15q26.1	0.329	1
EGR1	Amp_20p12.1	0.329	1
TPRKB	Amp_13q12.13	0.329	1
IQCD	Del_10q23.31	0.329	1
PLEKHF2	Amp_20p12.1	0.329	1
ASXL1	Amp_8p11.23	0.329	1
DIP2B	Del_8q11.1	0.329	1
ROS1	Del_4q35.1	0.329	1
RBPJ	Del_17q24.3	0.329	1
LARP4B	Del_8q11.1	0.329	1
GMPS	Del_17q24.3	0.329	1
BCOR	7q-Amp	0.33	1
EGR1	4q-Del	0.33	1
EGR1	Amp_11p15.5	0.33	1
EGR1	Del_1p13.2	0.33	1
ST3GAL6	4q-Del	0.33	1
ST3GAL6	Amp_11p15.5	0.33	1
ST3GAL6	Del_1p13.2	0.33	1
PLEKHF2	12p-Amp	0.33	1
VCX2	12p-Amp	0.33	1
RB1	8p-Del	0.33	1
BMPR2	8q-Amp	0.33	1
8p-Del	Del_12p13.1	0.33	1
Amp_5p12	Del_21q21.1	0.33	1
SOX9	BCL9	0.331	1
TXNDC2	17p-Del	0.331	1
SMAD2	7p-Amp	0.331	1
SMAD2	8q-Amp	0.331	1
PRKDC	ALG12	0.331	1
SLC12A6	Del_5q23.3	0.331	1
HIST1H1T	Amp_20q13.12	0.331	1
CTNNB1	16p-Amp	0.331	1
Amp_8p11.23	Del_4q22.1	0.331	1
MVK	Amp_17q24.1	0.332	1
ERBB2	Amp_10q22.3	0.332	1
PIK3R1	21q-Del	0.332	1
IFT57	Amp_13q12.2	0.332	1
L1TD1	Del_5q21.2	0.332	1
TOP2B	7q-Amp	0.332	1
NEXN	21q-Del	0.332	1
15q-Del	Amp_11p15.5	0.332	1
21q-Del	Amp_2q33.1	0.332	1
Amp_11p15.5	Amp_12p13.33	0.332	1
Amp_19q12	Del_5q21.2	0.332	1
ZFP36L2	Del_8p22	0.333	1
TXNDC2	Amp_20p12.1	0.333	1
SMAD2	Amp_6p21.1	0.333	1
SMAD2	Del_3p26.3	0.333	1
FMN2	Del_8q11.1	0.333	1
CHUK	Del_12p13.1	0.333	1
TOP2B	Amp_20p12.1	0.333	1
ATM	Amp_19q12	0.333	1
ATM	Del_3q26.31	0.333	1
TXNDC2	17q-Amp	0.334	1
ACVR1B	RLIM	0.334	1
ACVR1B	1p-Del	0.334	1
CHUK	Amp_17q12	0.334	1
ZBTB20	Del_6q26	0.334	1
ZBTB20	Del_19p13.3	0.334	1
C11orf30	Amp_17q12	0.334	1
RLIM	Del_16q23.1	0.334	1
TOP2B	17q-Amp	0.334	1
MAP4K3	Del_6q26	0.334	1
NEXN	Amp_20p12.1	0.334	1
IDH1	Del_6p25.3	0.334	1
IDH1	Del_6q26	0.334	1
IDH1	Del_19p13.3	0.334	1
KDM6A	1p-Del	0.334	1
IFT57	Amp_8p11.23	0.335	1
GMNN	Amp_20p11.21	0.335	1
PIK3R1	15q-Del	0.336	1
PIK3R1	Amp_12p13.33	0.336	1
FKBP9	Del_15q11.2	0.336	1
SETD2	Del_2q22.1	0.336	1
2p-Amp	Del_5q22.2	0.336	1
2q-Amp	Del_5q22.2	0.336	1
TP53	Del_2p12	0.337	1
WNT1	Del_22q13.32	0.337	1
STARD3NL	Amp_13q12.13	0.337	1
ATXN3L	13q-Amp	0.337	1
BCL9	Del_5q22.2	0.337	1
ASXL1	Amp_17q12	0.337	1
ALG12	Del_22q13.32	0.337	1
L1TD1	Amp_5p12	0.337	1
FYN	Amp_13q12.13	0.337	1
SLC12A6	Del_5q22.2	0.337	1
CDK12	20p-Del	0.337	1
NEXN	Amp_5p12	0.337	1
Amp_5p12	Del_3q26.31	0.337	1
Amp_16p11.2	Del_15q15.2	0.337	1
PIK3R1	17q-Amp	0.338	1
CREBBP	Del_10q21.1	0.338	1
OR4D10	9p-Amp	0.339	1
OR4D10	Del_10q21.1	0.339	1
RHOA	7p-Amp	0.339	1
RHOA	8q-Amp	0.339	1
IQCD	7p-Amp	0.339	1
IQCD	8q-Amp	0.339	1
PTCH1	Amp_17q24.1	0.339	1
GRB2	Del_18p11.31	0.339	1
IFT57	7p-Amp	0.339	1
RSPH3	Del_18p11.31	0.339	1
DDX26B	12q-Amp	0.339	1
NEXN	Amp_13q12.13	0.339	1
8p-Amp	Del_3p14.2	0.339	1
SOX9	VCX2	0.34	1
ZFP36L2	17p-Del	0.34	1
BCOR	Del_10q25.2	0.34	1
STARD3NL	20p-Del	0.34	1
EGR1	Del_5q23.3	0.34	1
P2RY13	20p-Del	0.34	1
ST3GAL6	Del_5q23.3	0.34	1
PLEKHF2	Del_5q23.3	0.34	1
NR1H3	20p-Del	0.34	1
PLAGL2	Del_14q11.2	0.34	1
PLAGL2	Del_15q21.1	0.34	1
PCBP1	20p-Del	0.34	1
DCLK2	20p-Del	0.34	1
GPATCH8	20p-Del	0.34	1
PRPS1	22q-Del	0.34	1
PRPS1	Del_4p16.1	0.34	1
BIRC3	20p-Del	0.34	1
16q-Amp	20p-Del	0.34	1
7p-Amp	Del_10q23.31	0.34	1
STARD3NL	Amp_8q24.21	0.341	1
P2RY13	Del_22q13.32	0.341	1
SMAD4	8q-Amp	0.341	1
DCLK2	Amp_8q24.21	0.341	1
DCLK2	Del_22q13.32	0.341	1
FYN	Del_22q13.32	0.341	1
CTNNB1	Del_1p36.11	0.341	1
CRIPAK	B2M	0.342	1
CRIPAK	RBPJ	0.342	1
CRIPAK	16p-Amp	0.342	1
CRIPAK	Del_8q11.1	0.342	1
WNT1	Del_15q22.33	0.342	1
FBXW7	Del_6p25.3	0.342	1
BCL9	Del_16p13.3	0.342	1
ALG12	Del_15q22.33	0.342	1
RBPJ	Del_5q22.2	0.342	1
C14orf184	Del_15q22.33	0.342	1
HLA-A	Del_5q22.2	0.342	1
BCORL1	Del_16p13.3	0.342	1
SLC12A6	Del_16p13.3	0.342	1
RHOA	Del_14q11.2	0.343	1
MVK	Del_10q25.2	0.343	1
ZBTB20	Amp_8q24.21	0.343	1
IQCD	Del_15q21.1	0.343	1
PRRG1	Del_10q25.2	0.343	1
MPHOSPH10	Amp_8q24.21	0.343	1
BMPR2	Amp_10q22.3	0.343	1
MAP4K3	Amp_8q24.21	0.343	1
IDH1	Amp_8q24.21	0.343	1
1p-Del	Amp_8q24.21	0.343	1
MLH1	Del_5q21.2	0.344	1
ASXL1	Del_14q11.2	0.344	1
ALG12	20q-Amp	0.344	1
C14orf184	20q-Amp	0.344	1
IDH1	18p-Del	0.344	1
Amp_17q12	Del_15q21.1	0.344	1
SMAD2	Del_21q11.2	0.345	1
THOC7	Del_3p14.2	0.345	1
CHUK	Del_15q22.33	0.345	1
PLAGL2	Del_15q15.2	0.345	1
SLC12A6	8q-Amp	0.345	1
CREBBP	Amp_6p21.1	0.345	1
CREBBP	Del_3p26.3	0.345	1
TPRKB	17p-Del	0.346	1
RNF43	Del_12p13.1	0.347	1
ACVR1B	Del_1p33	0.347	1
SMAD2	4p-Del	0.347	1
FMN2	4q-Del	0.347	1
BCL9	Amp_8p11.23	0.347	1
PTGDR	21q-Del	0.347	1
ATM	8q-Amp	0.347	1
KDM6A	Del_8p22	0.347	1
14q-Del	Amp_8p11.21	0.347	1
Del_5q21.2	Del_7q31.1	0.347	1
ARID1A	Amp_5p12	0.348	1
WNT1	Del_4q35.1	0.348	1
ALG12	Del_4q35.1	0.348	1
TOP2B	Del_4q22.1	0.348	1
1p-Del	Amp_16p11.2	0.348	1
Amp_16p11.2	Del_1p36.11	0.348	1
FAM123B	2p-Amp	0.349	1
FAM123B	2q-Amp	0.349	1
FAM123B	Amp_15q26.1	0.349	1
MLH1	Amp_15q26.1	0.349	1
SMAD2	Del_12p13.1	0.349	1
IQCD	Del_1p33	0.349	1
IFT57	Del_1p33	0.349	1
TOP2B	Del_5q12.1	0.349	1
ZNF486	Del_1p33	0.349	1
8q-Amp	Del_21q21.1	0.349	1
Del_5q12.1	Del_6p25.3	0.349	1
NF2	22q-Del	0.35	1
MAPK6	Del_4p16.1	0.35	1
RHOA	Del_15q15.2	0.35	1
CHUK	17q-Amp	0.35	1
ZBTB20	Amp_6p21.1	0.35	1
ZBTB20	Del_3p26.3	0.35	1
IQCD	Del_15q15.2	0.35	1
PLAGL2	Del_1p36.11	0.35	1
PCBP1	Del_15q22.33	0.35	1
C2orf29	22q-Del	0.35	1
DCLK2	Del_15q22.33	0.35	1
FKBP9	Del_4p16.1	0.35	1
MAP4K3	Amp_6p21.1	0.35	1
MAP4K3	Del_3p26.3	0.35	1
BIRC3	Del_15q22.33	0.35	1
IDH1	Amp_6p21.1	0.35	1
CREBBP	16q-Amp	0.35	1
MLH1	Del_3p14.2	0.351	1
ERBB2	14q-Del	0.351	1
14q-Del	Amp_1q31.1	0.351	1
TXNDC2	5q-Del	0.352	1
TXNDC2	Amp_2q33.1	0.352	1
TXNDC2	Del_3q26.31	0.352	1
OR4D10	Del_17q24.3	0.352	1
ATXN3L	Amp_20q13.12	0.352	1
DDX26B	Del_17q24.3	0.352	1
L1TD1	Del_19p13.3	0.352	1
TOP2B	Amp_19q12	0.352	1
NEXN	Del_6p25.3	0.352	1
NEXN	Del_6q26	0.352	1
CTNNB1	8q-Amp	0.352	1
Amp_2q33.1	Del_6p25.3	0.352	1
Amp_19q12	Del_6q26	0.352	1
APC	SMAD2	0.353	1
PTEN	2q-Amp	0.353	1
6p-Amp	Del_18p11.31	0.353	1
TP53	B2M	0.354	1
FAM9A	Del_5q12.1	0.354	1
ATXN3L	Del_1p36.11	0.354	1
GRB2	Del_5q12.1	0.354	1
L1TD1	Del_1p36.11	0.354	1
SETD2	Amp_8p11.23	0.354	1
NEXN	Del_1p36.11	0.354	1
Amp_2q33.1	Del_1p36.11	0.354	1
Amp_10q22.3	Amp_20q11.21	0.354	1
CRIPAK	Amp_8p11.21	0.355	1
RNF43	GGT1	0.355	1
B2M	Del_16q23.1	0.355	1
ACVR1B	16p-Amp	0.355	1
ACVR1B	Del_8q11.1	0.355	1
THOC7	Del_8p22	0.355	1
TPRKB	4p-Del	0.355	1
PRRG1	14q-Del	0.355	1
PIK3R1	9p-Amp	0.355	1
PIK3R1	14q-Del	0.355	1
PIK3R1	Del_10q21.1	0.355	1
RSPH3	Del_8p22	0.355	1
RBPJ	Del_16q23.1	0.355	1
GMPS	Del_16q23.1	0.355	1
KDM6A	16p-Amp	0.355	1
KDM6A	Del_8q11.1	0.355	1
12q-Amp	20p-Del	0.355	1
16p-Amp	Del_16q23.1	0.355	1
14q-Del	Amp_10q22.3	0.355	1
RNF43	Del_3p14.2	0.356	1
MLH1	Del_5q22.2	0.356	1
SELPLG	Amp_5p12	0.356	1
CHUK	Del_4q35.1	0.356	1
MGA	Amp_17q24.1	0.356	1
C2orf29	Amp_5p12	0.356	1
SLC26A8	Amp_5p12	0.356	1
FKBP9	Amp_5p12	0.356	1
Amp_5p12	Del_16p13.3	0.356	1
Amp_17q24.1	Del_5q12.1	0.356	1
CRIPAK	Del_21q11.2	0.357	1
BCL9	Del_14q11.2	0.357	1
DIP2B	8q-Amp	0.357	1
LARP4B	8q-Amp	0.357	1
BCORL1	Del_15q21.1	0.357	1
TP53	Del_10q21.1	0.358	1
OR4D10	15q-Del	0.358	1
RHOA	Del_1p36.11	0.358	1
P2RY13	Del_4q35.1	0.358	1
IQCD	Del_1p36.11	0.358	1
PCBP1	Del_4q35.1	0.358	1
IFT57	Del_1p36.11	0.358	1
DDX26B	Amp_12p13.33	0.358	1
DCLK2	Del_4q35.1	0.358	1
GPATCH8	Del_4q35.1	0.358	1
BIRC3	Del_4q35.1	0.358	1
16q-Amp	Del_4q35.1	0.358	1
Amp_17q12	Del_15q15.2	0.358	1
EGR1	Del_15q11.2	0.359	1
BCL9	Del_10q23.31	0.359	1
ST3GAL6	Del_10q23.31	0.359	1
PLEKHF2	Del_15q11.2	0.359	1
ASXL1	Del_4q35.1	0.359	1
ASXL1	Del_12p13.1	0.359	1
VCX2	Del_10q23.31	0.359	1
8q-Amp	14q-Del	0.359	1
WNT1	Del_4q22.1	0.36	1
RHOA	ERBB2	0.36	1
RHOA	Amp_17q24.1	0.36	1
NR1H3	RB1	0.36	1
ALG12	Del_4q22.1	0.36	1
PTCH1	PCBP1	0.36	1
PCBP1	RB1	0.36	1
IFT57	Amp_1q31.1	0.36	1
IFT57	Amp_17q24.1	0.36	1
RBPJ	7p-Amp	0.36	1
RBBP7	8q-Amp	0.36	1
RB1	16q-Amp	0.36	1
C14orf184	Del_4q22.1	0.36	1
GMPS	8q-Amp	0.36	1
ZNF486	Amp_17q24.1	0.36	1
7p-Amp	Del_8q11.1	0.36	1
FAM123B	16p-Amp	0.361	1
SELPLG	Del_5q21.2	0.361	1
MAPK6	21q-Del	0.361	1
MAPK6	Del_5q21.2	0.361	1
C2orf29	Del_5q21.2	0.361	1
SMAD4	Del_1p36.11	0.361	1
SLC26A8	21q-Del	0.361	1
FKBP9	Del_5q21.2	0.361	1
ALDH1A3	21q-Del	0.361	1
ALDH1A3	Del_5q21.2	0.361	1
ATM	Del_10q23.31	0.361	1
TP53	8p-Amp	0.362	1
TXNDC2	12p-Amp	0.362	1
TXNDC2	Del_1p13.2	0.362	1
CDH1	Del_6p25.3	0.362	1
BCL9	1p-Del	0.362	1
NLRC4	1p-Del	0.362	1
RLIM	BCORL1	0.362	1
RB1	Del_8p23.2	0.362	1
TOP2B	Amp_11p15.5	0.362	1
BCORL1	1p-Del	0.362	1
SLC12A6	1p-Del	0.362	1
12p-Amp	Del_6p25.3	0.362	1
Amp_8p11.21	Del_6q26	0.362	1
APC	WNT1	0.363	1
CDH1	12p-Amp	0.363	1
STARD3NL	12q-Amp	0.363	1
STARD3NL	9p-Amp	0.363	1
FAM9A	4q-Del	0.363	1
FAM9A	Del_1p13.2	0.363	1
THOC7	12p-Amp	0.363	1
THOC7	4q-Del	0.363	1
THOC7	Amp_11p15.5	0.363	1
TPRKB	Amp_17q12	0.363	1
MVK	SMAD4	0.363	1
P2RY13	9p-Amp	0.363	1
ASXL1	HIST1H1T	0.363	1
GRB2	12p-Amp	0.363	1
GRB2	4q-Del	0.363	1
GRB2	Amp_11p15.5	0.363	1
PCBP1	9p-Amp	0.363	1
RSPH3	12p-Amp	0.363	1
RSPH3	4q-Del	0.363	1
RSPH3	Amp_11p15.5	0.363	1
RSPH3	Del_1p13.2	0.363	1
DCLK2	9p-Amp	0.363	1
FKBP9	Amp_8p11.23	0.363	1
FYN	9p-Amp	0.363	1
GPATCH8	9p-Amp	0.363	1
GPATCH8	Del_10q21.1	0.363	1
BIRC3	9p-Amp	0.363	1
BIRC3	Del_10q21.1	0.363	1
HIST1H1T	Amp_17q12	0.363	1
KDM6A	Amp_17q24.1	0.363	1
12p-Amp	Del_5q22.2	0.363	1
16q-Amp	Del_10q21.1	0.363	1
Amp_1q31.1	Del_16q23.1	0.363	1
APC	EGR1	0.364	1
FMN2	20p-Del	0.364	1
TPRKB	Amp_13q12.2	0.364	1
SMAD4	Amp_13q12.13	0.364	1
CRIPAK	OR4D10	0.365	1
BCOR	Del_15q22.33	0.365	1
NF1	Amp_13q12.13	0.365	1
ATXN3L	PIK3R1	0.365	1
MVK	20p-Del	0.365	1
DIP2B	17p-Del	0.365	1
PRRG1	20p-Del	0.365	1
C2orf29	Del_18p11.31	0.365	1
PTEN	Del_16p13.3	0.365	1
FAM123B	Del_22q13.32	0.366	1
MLH1	Del_22q13.32	0.366	1
ALG12	Del_21q21.1	0.366	1
RSPH3	13q-Amp	0.366	1
C14orf184	Del_21q21.1	0.366	1
12p-Amp	Del_18q21.2	0.366	1
ZBTB20	Del_12p13.1	0.367	1
ROS1	7p-Amp	0.367	1
ROS1	8q-Amp	0.367	1
RB1	Amp_2q33.1	0.367	1
IDH1	Del_12p13.1	0.367	1
ARID1A	Del_15q21.1	0.368	1
SELPLG	Amp_8p11.21	0.368	1
FKBP9	Amp_8p11.21	0.368	1
Amp_16p11.2	Del_1p33	0.368	1
TP53	ATXN3L	0.369	1
TP53	Amp_2q33.1	0.369	1
ZFP36L2	Amp_16p11.2	0.369	1
B2M	Amp_16p11.2	0.369	1
CHUK	5q-Del	0.369	1
CHUK	Amp_2q33.1	0.369	1
ATXN3L	Amp_6p21.1	0.369	1
ATXN3L	Del_3p26.3	0.369	1
C11orf30	5q-Del	0.369	1
C11orf30	Amp_19q12	0.369	1
C11orf30	Del_3q26.31	0.369	1
L1TD1	Amp_6p21.1	0.369	1
L1TD1	Del_3p26.3	0.369	1
HLA-A	Amp_16p11.2	0.369	1
MAP4K3	8p-Del	0.369	1
NEXN	Del_3p26.3	0.369	1
GMPS	Amp_16p11.2	0.369	1
Amp_19q12	Del_3p26.3	0.369	1
FMN2	Del_5q23.3	0.37	1
IQCD	Del_10q25.2	0.37	1
ASXL1	20p-Del	0.37	1
IFT57	Del_10q25.2	0.37	1
ROS1	1p-Del	0.37	1
ZNF486	Del_10q25.2	0.37	1
Amp_12p13.33	Del_6p25.3	0.37	1
APC	20p-Del	0.371	1
CDH1	Amp_8p11.21	0.371	1
SOX9	GRB2	0.372	1
SOX9	Del_2q22.1	0.372	1
ZFP36L2	Amp_20q12	0.372	1
ACVR1B	22q-Del	0.372	1
GGT1	SETD2	0.372	1
SELPLG	Del_6q26	0.372	1
SELPLG	Del_19p13.3	0.372	1
MAPK6	Del_6p25.3	0.372	1
MAPK6	Del_6q26	0.372	1
MAPK6	Del_19p13.3	0.372	1
PRKDC	Amp_10q22.3	0.372	1
RPTN	7q-Amp	0.372	1
RBPJ	7q-Amp	0.372	1
SLC26A8	Del_6q26	0.372	1
SLC26A8	Del_15q21.1	0.372	1
SLC26A8	Del_19p13.3	0.372	1
TOP2B	Del_16p13.3	0.372	1
FKBP9	Del_6q26	0.372	1
FKBP9	Del_15q21.1	0.372	1
FKBP9	Del_19p13.3	0.372	1
ALDH1A3	Del_19p13.3	0.372	1
CDK12	9p-Amp	0.372	1
Del_15q21.1	Del_16p13.3	0.372	1
BCOR	20p-Del	0.373	1
WNT1	15q-Del	0.373	1
THOC7	Del_18q12.2	0.373	1
ERBB2	4q-Del	0.373	1
ALG12	15q-Del	0.373	1
GRB2	Del_18q12.2	0.373	1
DIP2B	20p-Del	0.373	1
RB1	Del_8p22	0.373	1
C14orf184	15q-Del	0.373	1
LARP4B	20p-Del	0.373	1
MAP4K3	4p-Del	0.373	1
ATM	Del_2p12	0.373	1
IDH1	4p-Del	0.373	1
4q-Del	Amp_17q24.1	0.373	1
Amp_6p21.1	Del_5q12.1	0.373	1
Amp_17q24.1	Del_1p13.2	0.373	1
ARID1A	1p-Del	0.374	1
MLH1	Del_1p36.11	0.374	1
STARD3NL	Amp_13q22.1	0.374	1
FAM9A	7q-Amp	0.374	1
ALPK2	Del_3p14.2	0.374	1
ASXL1	Del_3p14.2	0.374	1
PCBP1	Amp_13q22.1	0.374	1
RLIM	Del_15q11.2	0.374	1
MPHOSPH10	Del_15q11.2	0.374	1
FYN	Amp_13q22.1	0.374	1
MGA	4p-Del	0.375	1
SOX9	Del_6p25.3	0.376	1
SOX9	Del_19p13.3	0.376	1
ZFP36L2	Amp_13q12.13	0.376	1
TXNDC2	Del_5q23.3	0.376	1
BCOR	PCBP1	0.376	1
MGA	Del_10q25.2	0.376	1
P2RY13	Del_4q22.1	0.376	1
ROS1	2p-Amp	0.376	1
ROS1	2q-Amp	0.376	1
DDX26B	Del_5q22.2	0.376	1
TOP2B	Del_5q23.3	0.376	1
DCLK2	Del_4q22.1	0.376	1
DCLK2	Del_17q24.3	0.376	1
FYN	Del_17q24.3	0.376	1
GPATCH8	Del_17q24.3	0.376	1
HIST1H1T	8p-Del	0.376	1
16q-Amp	Del_4q22.1	0.376	1
9p-Amp	Del_4q22.1	0.376	1
Del_5q23.3	Del_6q26	0.376	1
CDH1	GMNN	0.377	1
SMAD2	Del_15q22.33	0.377	1
FBXW7	7p-Amp	0.377	1
PLAGL2	14q-Del	0.377	1
RLIM	Amp_5p12	0.377	1
CDK12	Amp_10q22.3	0.377	1
HIST1H1T	Amp_20q12	0.377	1
1p-Del	Amp_5p12	0.377	1
CDH1	Del_4q22.1	0.378	1
BCOR	Del_4q35.1	0.378	1
FMN2	Del_4q22.1	0.378	1
ACVR1B	Del_10q25.2	0.379	1
EGR1	Del_1p33	0.379	1
BCL9	Del_1p36.11	0.379	1
ST3GAL6	Del_1p33	0.379	1
IDH1	Del_21q11.2	0.379	1
CRIPAK	Del_17p12	0.38	1
TPRKB	Del_3p14.2	0.38	1
RLIM	Del_4p16.1	0.38	1
HIST1H1T	18p-Del	0.38	1
HIST1H1T	Amp_20p11.21	0.38	1
Amp_20p12.1	Del_3p26.3	0.38	1
STARD3NL	Amp_13q12.2	0.381	1
PCBP1	Amp_13q12.2	0.381	1
FKBP9	Del_15q15.2	0.381	1
FYN	Amp_13q12.2	0.381	1
Amp_5p12	Del_10q23.31	0.381	1
Del_15q15.2	Del_16p13.3	0.381	1
FMN2	Del_6p25.3	0.382	1
NEXN	Amp_13q22.1	0.382	1
CHUK	20p-Amp	0.383	1
BCL9	16p-Amp	0.383	1
BCL9	Del_8q11.1	0.383	1
NLRC4	16p-Amp	0.383	1
NLRC4	Del_8q11.1	0.383	1
BCORL1	Del_8q11.1	0.383	1
SLC12A6	16p-Amp	0.383	1
SLC12A6	Del_8q11.1	0.383	1
ZBTB20	17q-Amp	0.384	1
MAP4K3	17q-Amp	0.384	1
SETD2	Del_15q15.2	0.384	1
20p-Amp	Del_22q13.32	0.384	1
2p-Amp	22q-Del	0.384	1
2p-Amp	Del_4p16.1	0.384	1
2q-Amp	22q-Del	0.384	1
2q-Amp	Del_4p16.1	0.384	1
18q-Del	Del_7q31.1	0.384	1
22q-Del	Amp_15q26.1	0.384	1
SMAD2	5q-Del	0.385	1
SMAD2	Del_3p14.2	0.385	1
SMAD2	Del_3q26.31	0.385	1
WNT1	Del_5q22.2	0.385	1
SELPLG	Amp_20p12.1	0.385	1
NR1H3	Del_21q21.1	0.385	1
PCBP1	Del_21q21.1	0.385	1
L1TD1	Del_12p13.1	0.385	1
DCLK2	Del_21q21.1	0.385	1
GPATCH8	Del_21q21.1	0.385	1
KDM6A	Del_5q21.2	0.385	1
20q-Amp	Amp_10q22.3	0.385	1
2p-Amp	Del_18q21.2	0.385	1
2q-Amp	Del_18q21.2	0.385	1
6p-Amp	Del_18q21.2	0.385	1
ACVR1B	Del_21q11.2	0.386	1
CHUK	12p-Amp	0.386	1
CHUK	4q-Del	0.386	1
CHUK	Del_1p13.2	0.386	1
C11orf30	Amp_11p15.5	0.386	1
C11orf30	Del_1p13.2	0.386	1
12p-Amp	Del_3p26.3	0.386	1
8p-Amp	Del_7q31.1	0.386	1
Amp_11p15.5	Del_3p26.3	0.386	1
DIP2B	Del_15q11.2	0.387	1
C2orf29	Del_8p22	0.387	1
CDH1	4p-Del	0.388	1
SMAD2	NF2	0.388	1
SELPLG	Amp_6p21.1	0.388	1
SELPLG	Del_3p26.3	0.388	1
NF2	Del_12p13.1	0.388	1
MAPK6	Del_3p26.3	0.388	1
EGR1	Del_15q21.1	0.388	1
PRKDC	Del_2p12	0.388	1
PLEKHF2	Del_14q11.2	0.388	1
PLEKHF2	Del_15q21.1	0.388	1
ALPK2	8q-Amp	0.388	1
C11orf30	Del_16p13.3	0.388	1
C2orf29	Del_3p26.3	0.388	1
SLC26A8	Amp_6p21.1	0.388	1
SLC26A8	Del_3p26.3	0.388	1
FKBP9	Amp_6p21.1	0.388	1
FKBP9	Del_3p26.3	0.388	1
ALDH1A3	Del_3p26.3	0.388	1
CRIPAK	NR1H3	0.389	1
CRIPAK	FYN	0.389	1
CRIPAK	16q-Amp	0.389	1
ATXN3L	8p-Amp	0.389	1
TPRKB	Del_5q12.1	0.389	1
MVK	Del_10q21.1	0.389	1
NLRC4	Del_1p33	0.389	1
C11orf30	Del_21q21.1	0.389	1
PRRG1	Del_10q21.1	0.389	1
PRRG1	Del_15q22.33	0.389	1
L1TD1	8p-Amp	0.389	1
BCORL1	Del_1p33	0.389	1
SLC12A6	Del_1p33	0.389	1
HIST1H1T	Del_5q12.1	0.389	1
Amp_19q12	Del_8p23.2	0.389	1
SOX9	Amp_1q31.1	0.39	1
SOX9	Amp_17q24.1	0.39	1
GGT1	SMAD4	0.39	1
EGR1	Amp_1q31.1	0.39	1
EGR1	Amp_17q24.1	0.39	1
ERBB2	VCX2	0.39	1
ST3GAL6	Amp_17q24.1	0.39	1
PLEKHF2	Amp_1q31.1	0.39	1
PLEKHF2	Amp_17q24.1	0.39	1
NR1H3	Amp_20p12.1	0.39	1
VCX2	Amp_1q31.1	0.39	1
VCX2	Amp_17q24.1	0.39	1
NEXN	Amp_13q12.2	0.39	1
Amp_17q24.1	Del_5q23.3	0.39	1
ARID1A	12p-Amp	0.391	1
ARID1A	4q-Del	0.391	1
CDH1	Del_5q23.3	0.391	1
SELPLG	Del_1p36.11	0.391	1
FAM9A	Del_10q23.31	0.391	1
GRB2	Del_10q23.31	0.391	1
RSPH3	Del_10q23.31	0.391	1
RLIM	21q-Del	0.391	1
MPHOSPH10	Del_5q21.2	0.391	1
SLC26A8	Del_1p36.11	0.391	1
2p-Amp	21q-Del	0.391	1
2p-Amp	Del_5q21.2	0.391	1
2q-Amp	21q-Del	0.391	1
2q-Amp	Del_5q21.2	0.391	1
6p-Amp	21q-Del	0.391	1
21q-Del	Amp_15q26.1	0.391	1
Amp_5p12	Del_15q21.1	0.391	1
Amp_8p11.23	Del_10q21.1	0.391	1
CRIPAK	20p-Del	0.392	1
TXNDC2	1p-Del	0.392	1
NF1	13q-Amp	0.392	1
RLIM	Del_6p25.3	0.392	1
RLIM	Del_6q26	0.392	1
MPHOSPH10	Del_6q26	0.392	1
MPHOSPH10	Del_19p13.3	0.392	1
DDX26B	Amp_16p11.2	0.392	1
TOP2B	1p-Del	0.392	1
8p-Amp	Del_15q11.2	0.392	1
1p-Del	Del_19p13.3	0.392	1
RHOA	20p-Del	0.393	1
ALPK2	Del_4p16.1	0.393	1
ASXL1	Del_4p16.1	0.393	1
ASXL1	Del_5q12.1	0.393	1
BMPR2	12p-Amp	0.393	1
BMPR2	Del_1p13.2	0.393	1
ZNF486	20p-Del	0.393	1
RNF43	Del_7q31.1	0.394	1
TP53	EGR1	0.394	1
ZFP36L2	Del_8p23.2	0.394	1
CDH1	Del_2q22.1	0.394	1
RPTN	20p-Amp	0.394	1
RPTN	Del_8p23.2	0.394	1
THOC7	Amp_20p12.1	0.394	1
GRB2	Amp_20p12.1	0.394	1
PLAGL2	Del_22q13.32	0.394	1
PCBP1	15q-Del	0.394	1
PCBP1	Amp_12p13.33	0.394	1
TOP2B	Del_5q22.2	0.394	1
DCLK2	15q-Del	0.394	1
FYN	15q-Del	0.394	1
FYN	Amp_12p13.33	0.394	1
GPATCH8	Amp_12p13.33	0.394	1
GMPS	20p-Amp	0.394	1
PRPS1	4p-Del	0.394	1
PTGDR	4p-Del	0.394	1
BIRC3	15q-Del	0.394	1
BIRC3	Amp_12p13.33	0.394	1
20p-Amp	Del_8q11.1	0.394	1
Del_5q22.2	Del_6q26	0.394	1
CRIPAK	Del_18q21.2	0.395	1
MLH1	Del_1p13.2	0.395	1
20p-Amp	Amp_12p13.33	0.395	1
4p-Del	Amp_11p15.5	0.395	1
ACVR1B	7q-Amp	0.396	1
WNT1	Amp_20p12.1	0.396	1
EGR1	Del_15q15.2	0.396	1
ST3GAL6	Del_15q15.2	0.396	1
PLEKHF2	Del_15q15.2	0.396	1
C14orf184	Amp_20p12.1	0.396	1
BCORL1	Amp_8q24.21	0.396	1
STARD3NL	FBXW7	0.397	1
RHOA	14q-Del	0.397	1
FBXW7	FYN	0.397	1
SMAD4	9p-Amp	0.397	1
SMAD4	Del_8q11.1	0.397	1
ZNF486	14q-Del	0.397	1
FAM123B	WNT1	0.398	1
FAM123B	ALG12	0.398	1
B2M	Amp_5p12	0.398	1
CDH1	16p-Amp	0.398	1
SMAD2	Del_5q12.1	0.398	1
GGT1	Amp_11p15.5	0.398	1
EGR1	7p-Amp	0.398	1
EGR1	8q-Amp	0.398	1
RPTN	Amp_5p12	0.398	1
MGA	Del_12p13.1	0.398	1
TPRKB	4q-Del	0.398	1
TPRKB	Amp_11p15.5	0.398	1
TPRKB	Del_1p13.2	0.398	1
ST3GAL6	7p-Amp	0.398	1
ROS1	Amp_8q24.21	0.398	1
RBBP7	Amp_5p12	0.398	1
GMPS	Amp_5p12	0.398	1
HIST1H1T	12p-Amp	0.398	1
12p-Amp	Del_18q22.1	0.398	1
8q-Amp	Del_4p16.1	0.398	1
RNF43	9p-Amp	0.399	1
PRKDC	Del_16q23.1	0.399	1
PLAGL2	Del_15q22.33	0.399	1
CREBBP	Del_2p12	0.399	1
12q-Amp	4p-Del	0.399	1
2p-Amp	Del_18q22.1	0.399	1
2q-Amp	Del_18q22.1	0.399	1
6p-Amp	Del_18q22.1	0.399	1
9p-Amp	4p-Del	0.399	1
8p-Del	Amp_1q31.1	0.399	1
Amp_16p11.2	Del_10q25.2	0.399	1
SOX9	Del_3p26.3	0.4	1
EGR1	Del_10q25.2	0.4	1
THOC7	FBXW7	0.4	1
FBXW7	Del_2q22.1	0.4	1
ST3GAL6	Del_10q25.2	0.4	1
PLEKHF2	Del_10q25.2	0.4	1
C11orf30	Del_5q23.3	0.4	1
PCBP1	18p-Del	0.4	1
ROS1	15q-Del	0.4	1
VCX2	Del_10q25.2	0.4	1
17q-Amp	Del_22q13.32	0.4	1
Del_3p26.3	Del_5q23.3	0.4	1
RNF43	Amp_19q12	0.401	1
RNF43	Del_3q26.31	0.401	1
CHUK	15q-Del	0.401	1
CHUK	Amp_12p13.33	0.401	1
ATXN3L	4p-Del	0.401	1
PTCH1	Del_3p14.2	0.401	1
RB1	Del_3p14.2	0.401	1
NEXN	4p-Del	0.401	1
4p-Del	Amp_2q33.1	0.401	1
4p-Del	Amp_19q12	0.401	1
Amp_8p11.23	Del_15q22.33	0.401	1
RNF43	Amp_12p13.33	0.402	1
ACVR1B	16q-Amp	0.402	1
STARD3NL	Del_16q23.1	0.402	1
MVK	Del_17q24.3	0.402	1
P2RY13	Del_16q23.1	0.402	1
NR1H3	KDM6A	0.402	1
DIP2B	Amp_10q22.3	0.402	1
PRRG1	Del_17q24.3	0.402	1
PCBP1	Del_16q23.1	0.402	1
DCLK2	Del_16q23.1	0.402	1
FYN	Del_16q23.1	0.402	1
PTGDR	Amp_17q12	0.402	1
KDM6A	16q-Amp	0.402	1
16q-Amp	Del_16q23.1	0.402	1
20p-Del	Del_3p14.2	0.402	1
Amp_5p12	Del_15q15.2	0.402	1
Amp_13q12.13	Del_6p25.3	0.402	1
CHUK	Amp_8p11.21	0.403	1
ATXN3L	17q-Amp	0.403	1
ZBTB20	5q-Del	0.403	1
ZBTB20	Amp_2q33.1	0.403	1
ZBTB20	Amp_19q12	0.403	1
ZBTB20	Del_3q26.31	0.403	1
PIK3R1	Del_14q11.2	0.403	1
PIK3R1	Del_15q21.1	0.403	1
VCX2	Del_1p36.11	0.403	1
L1TD1	IDH1	0.403	1
L1TD1	17q-Amp	0.403	1
MAP4K3	5q-Del	0.403	1
MAP4K3	Amp_19q12	0.403	1
NEXN	IDH1	0.403	1
NEXN	17q-Amp	0.403	1
IDH1	5q-Del	0.403	1
IDH1	Amp_2q33.1	0.403	1
IDH1	Amp_19q12	0.403	1
IDH1	Del_3q26.31	0.403	1
CTNNB1	Del_22q13.32	0.403	1
17q-Amp	5q-Del	0.403	1
9p-Amp	15q-Del	0.403	1
Amp_12p13.33	Del_10q21.1	0.403	1
ATXN3L	Amp_8q24.21	0.404	1
NEXN	Amp_8q24.21	0.404	1
9p-Amp	Del_14q11.2	0.404	1
SMAD2	Del_16p13.3	0.405	1
NF2	Del_2p12	0.405	1
MAPK6	Del_12p13.1	0.405	1
BCL9	Amp_1q31.1	0.405	1
ERBB2	BCORL1	0.405	1
PLAGL2	Del_4q35.1	0.405	1
RSPH3	Del_8p23.2	0.405	1
C2orf29	Del_12p13.1	0.405	1
SMAD4	Del_14q11.2	0.405	1
SLC26A8	Del_12p13.1	0.405	1
FKBP9	Del_12p13.1	0.405	1
ALDH1A3	Del_12p13.1	0.405	1
BCORL1	Amp_1q31.1	0.405	1
SLC12A6	Amp_1q31.1	0.405	1
Amp_8p11.21	Del_14q11.2	0.405	1
Amp_8p11.21	Del_15q21.1	0.405	1
APC	ARID1A	0.406	1
MLH1	20p-Del	0.406	1
OR4D10	BCORL1	0.406	1
NF2	Del_3p14.2	0.406	1
NF1	Amp_17q12	0.406	1
RB1	Del_7q31.1	0.406	1
Amp_1q31.1	Del_15q22.33	0.406	1
Amp_17q24.1	Del_15q22.33	0.406	1
NF1	Del_22q13.32	0.407	1
TPRKB	Del_5q23.3	0.407	1
HIST1H1T	Del_5q23.3	0.407	1
Amp_8p11.21	Del_4q22.1	0.407	1
ZFP36L2	Amp_8q24.21	0.408	1
RPTN	Amp_8q24.21	0.408	1
CHUK	1p-Del	0.408	1
ALPK2	Del_21q21.1	0.408	1
C11orf30	1p-Del	0.408	1
RLIM	Del_3p26.3	0.408	1
MPHOSPH10	Amp_6p21.1	0.408	1
MPHOSPH10	Del_3p26.3	0.408	1
GMPS	Amp_8q24.21	0.408	1
ARID1A	THOC7	0.409	1
ARID1A	Del_2q22.1	0.409	1
FAM9A	Del_15q11.2	0.409	1
SMAD4	8p-Amp	0.409	1
LARP4B	Del_10q21.1	0.409	1
HIST1H1T	Amp_20q11.21	0.409	1
12q-Amp	Del_17q24.3	0.409	1
9p-Amp	Del_17q24.3	0.409	1
SMAD2	Del_4q22.1	0.41	1
IDH1	Del_15q22.33	0.41	1
SMAD2	4q-Del	0.411	1
SMAD2	Del_1p13.2	0.411	1
FAM9A	Del_1p33	0.411	1
THOC7	Del_1p33	0.411	1
RSPH3	Del_1p33	0.411	1
RLIM	Del_15q21.1	0.411	1
C2orf29	Amp_13q12.13	0.411	1
RB1	Del_16p13.3	0.411	1
SETD2	PRPS1	0.411	1
CREBBP	Del_4q22.1	0.411	1
12p-Amp	Del_12p13.1	0.411	1
7p-Amp	Del_1p33	0.411	1
21q-Del	Amp_16p11.2	0.411	1
8p-Del	Amp_17q12	0.411	1
Amp_5p12	Del_1p33	0.411	1
ACVR1B	20p-Del	0.412	1
NF1	Amp_13q12.2	0.412	1
ATXN3L	Amp_20p11.21	0.412	1
MVK	Amp_8q24.21	0.412	1
ALPK2	Amp_8q24.21	0.412	1
PRRG1	Amp_8q24.21	0.412	1
VCX2	Amp_13q22.1	0.412	1
KDM6A	20p-Del	0.412	1
18p-Del	Amp_19q12	0.412	1
20p-Del	Del_16q23.1	0.412	1
ZFP36L2	TXNDC2	0.413	1
B2M	Del_6p25.3	0.413	1
B2M	Del_6q26	0.413	1
B2M	Del_19p13.3	0.413	1
TXNDC2	Del_8q11.1	0.413	1
FMN2	Del_3p26.3	0.413	1
RPTN	22q-Del	0.413	1
RPTN	Del_6q26	0.413	1
RPTN	Del_19p13.3	0.413	1
ALPK2	4q-Del	0.413	1
ASXL1	Amp_2q33.1	0.413	1
ASXL1	Del_1p13.2	0.413	1
PCBP1	Del_5q22.2	0.413	1
RBPJ	22q-Del	0.413	1
RBPJ	Del_4p16.1	0.413	1
RBPJ	Del_6p25.3	0.413	1
RBPJ	Del_6q26	0.413	1
RBPJ	Del_19p13.3	0.413	1
L1TD1	Amp_17q12	0.413	1
TOP2B	Del_8q11.1	0.413	1
HLA-A	Del_4p16.1	0.413	1
HLA-A	Del_6p25.3	0.413	1
HLA-A	Del_6q26	0.413	1
GMPS	Del_6p25.3	0.413	1
GMPS	Del_6q26	0.413	1
GMPS	Del_19p13.3	0.413	1
BIRC3	Del_5q22.2	0.413	1
16p-Amp	Del_6p25.3	0.413	1
16q-Amp	Del_5q22.2	0.413	1
20p-Amp	22q-Del	0.413	1
CRIPAK	MVK	0.414	1
ZFP36L2	Amp_20q11.21	0.414	1
OR4D10	8q-Amp	0.414	1
PRKDC	8q-Amp	0.414	1
PIK3R1	2p-Amp	0.414	1
PIK3R1	2q-Amp	0.414	1
PIK3R1	6p-Amp	0.414	1
PIK3R1	Amp_15q26.1	0.414	1
L1TD1	Del_21q11.2	0.414	1
PRRG1	Del_4q22.1	0.415	1
TOP2B	Amp_8p11.23	0.415	1
FMN2	9p-Amp	0.416	1
FMN2	Del_10q21.1	0.416	1
FMN2	Del_14q11.2	0.416	1
RPTN	Del_15q11.2	0.416	1
P2RY13	Amp_16p11.2	0.416	1
NR1H3	Amp_16p11.2	0.416	1
PCBP1	Amp_16p11.2	0.416	1
FYN	Amp_16p11.2	0.416	1
GPATCH8	Amp_16p11.2	0.416	1
ARID1A	21q-Del	0.417	1
RHOA	9p-Amp	0.417	1
FAM9A	Amp_8q24.21	0.417	1
IQCD	9p-Amp	0.417	1
IQCD	Del_10q21.1	0.417	1
PLAGL2	Del_4q22.1	0.417	1
IFT57	12q-Amp	0.417	1
IFT57	Del_10q21.1	0.417	1
ROS1	Amp_8p11.23	0.417	1
RBPJ	Amp_13q22.1	0.417	1
PTEN	Del_5q21.2	0.417	1
ZNF486	Del_10q21.1	0.417	1
GMNN	Del_1p36.11	0.417	1
Amp_16p11.2	Del_21q11.2	0.417	1
APC	ZNF486	0.418	1
FAM123B	Del_19p13.3	0.418	1
TXNDC2	Del_18q12.2	0.418	1
FMN2	Amp_12p13.33	0.418	1
MAPK6	8p-Amp	0.418	1
NF1	Del_5q23.3	0.418	1
ALG12	Amp_20p11.21	0.418	1
C2orf29	8p-Amp	0.418	1
FKBP9	8p-Amp	0.418	1
PIK3R1	Del_15q15.2	0.419	1
PRPS1	Del_3p14.2	0.419	1
PTGDR	Del_3p14.2	0.419	1
ATXN3L	Amp_20q12	0.42	1
ASXL1	Amp_8p11.21	0.42	1
9p-Amp	Del_8p23.2	0.42	1
OR4D10	Amp_5p12	0.421	1
ATXN3L	Amp_2q33.1	0.421	1
ATXN3L	Amp_19q12	0.421	1
NLRC4	Del_10q25.2	0.421	1
RLIM	Del_15q15.2	0.421	1
DDX26B	Amp_5p12	0.421	1
L1TD1	5q-Del	0.421	1
L1TD1	Amp_2q33.1	0.421	1
L1TD1	Amp_19q12	0.421	1
L1TD1	Del_3q26.31	0.421	1
NEXN	Amp_2q33.1	0.421	1
NEXN	Amp_19q12	0.421	1
NEXN	Del_3q26.31	0.421	1
5q-Del	Amp_2q33.1	0.421	1
5q-Del	Amp_19q12	0.421	1
Amp_19q12	Del_3q26.31	0.421	1
SELPLG	IDH1	0.422	1
MAPK6	17q-Amp	0.422	1
FAM9A	Amp_1q31.1	0.422	1
FAM9A	Amp_17q24.1	0.422	1
THOC7	Amp_17q24.1	0.422	1
ZBTB20	Del_16p13.3	0.422	1
ERBB2	Del_2q22.1	0.422	1
GRB2	Amp_1q31.1	0.422	1
GRB2	Amp_17q24.1	0.422	1
PCBP1	CTNNB1	0.422	1
PIK3R1	Del_15q22.33	0.422	1
C2orf29	17q-Amp	0.422	1
FKBP9	17q-Amp	0.422	1
PTEN	8q-Amp	0.422	1
FYN	CTNNB1	0.422	1
ALDH1A3	17q-Amp	0.422	1
MAP4K3	Del_16p13.3	0.422	1
IDH1	Del_16p13.3	0.422	1
17q-Amp	Del_16p13.3	0.422	1
BCOR	4p-Del	0.423	1
EGR1	20p-Del	0.423	1
THOC7	18q-Del	0.423	1
ST3GAL6	20p-Del	0.423	1
IQCD	Del_22q13.32	0.423	1
PLEKHF2	20p-Del	0.423	1
DIP2B	Amp_8p11.23	0.423	1
VCX2	20p-Del	0.423	1
PRKDC	Amp_19q12	0.424	1
PRKDC	Del_3q26.31	0.424	1
CHUK	Del_5q22.2	0.424	1
MGA	17q-Amp	0.424	1
ZBTB20	Del_5q12.1	0.424	1
RBPJ	21q-Del	0.424	1
RBPJ	Amp_13q12.2	0.424	1
RBPJ	Del_5q21.2	0.424	1
SMAD4	Amp_8q24.21	0.424	1
RBBP7	21q-Del	0.424	1
HLA-A	21q-Del	0.424	1
16p-Amp	21q-Del	0.424	1
16p-Amp	Del_5q21.2	0.424	1
17q-Amp	Del_5q12.1	0.424	1
Amp_8p11.21	Del_22q13.32	0.424	1
Amp_17q24.1	Del_5q21.2	0.424	1
Del_3p26.3	Del_5q22.2	0.424	1
SOX9	SMAD2	0.425	1
SOX9	Del_12p13.1	0.425	1
CDH1	Amp_12p13.33	0.425	1
SMAD2	1p-Del	0.425	1
BCL9	22q-Del	0.425	1
ASXL1	Amp_12p13.33	0.425	1
NLRC4	22q-Del	0.425	1
MPHOSPH10	Del_12p13.1	0.425	1
BCORL1	22q-Del	0.425	1
SLC12A6	22q-Del	0.425	1
NEXN	8q-Amp	0.425	1
ATM	Del_16q23.1	0.425	1
7q-Amp	14q-Del	0.425	1
DIP2B	Amp_20p11.21	0.426	1
SMAD4	Del_2p12	0.426	1
SETD2	5q-Del	0.426	1
SETD2	Amp_2q33.1	0.426	1
SETD2	Amp_19q12	0.426	1
TPRKB	Del_10q23.31	0.427	1
DIP2B	Del_17q24.3	0.427	1
SMAD4	Del_3q26.31	0.427	1
HIST1H1T	Del_10q23.31	0.427	1
CTNNB1	Del_10q21.1	0.427	1
7q-Amp	Del_3p14.2	0.427	1
CRIPAK	12q-Amp	0.428	1
CRIPAK	9p-Amp	0.428	1
CRIPAK	Del_10q21.1	0.428	1
SOX9	Amp_20p12.1	0.428	1
TPRKB	7q-Amp	0.428	1
IQCD	Amp_8p11.21	0.428	1
PTGDR	Del_5q12.1	0.428	1
KDM6A	Amp_10q22.3	0.428	1
KDM6A	Del_8p23.2	0.428	1
Del_8p23.2	Del_16q23.1	0.428	1
ZFP36L2	C11orf30	0.429	1
ZFP36L2	Amp_6p21.1	0.429	1
ZFP36L2	Del_3p26.3	0.429	1
B2M	Amp_6p21.1	0.429	1
RHOA	DIP2B	0.429	1
RHOA	Del_17q24.3	0.429	1
RPTN	CHUK	0.429	1
RPTN	Amp_6p21.1	0.429	1
CHUK	16p-Amp	0.429	1
CHUK	Del_8q11.1	0.429	1
IQCD	Del_17q24.3	0.429	1
PLAGL2	15q-Del	0.429	1
C11orf30	16p-Amp	0.429	1
C11orf30	Del_8q11.1	0.429	1
IFT57	Del_17q24.3	0.429	1
RBPJ	Amp_6p21.1	0.429	1
RBPJ	Del_3p26.3	0.429	1
SMAD4	Del_15q22.33	0.429	1
RBBP7	Amp_6p21.1	0.429	1
HLA-A	Amp_6p21.1	0.429	1
GMPS	Amp_6p21.1	0.429	1
GMPS	Del_3p26.3	0.429	1
ZNF486	Del_17q24.3	0.429	1
Amp_6p21.1	Del_10q23.31	0.429	1
Amp_13q12.13	Del_7q31.1	0.429	1
RNF43	SELPLG	0.43	1
BCL9	NR1H3	0.43	1
BCL9	16q-Amp	0.43	1
NLRC4	16q-Amp	0.43	1
PCBP1	BCORL1	0.43	1
FKBP9	4p-Del	0.43	1
SLC12A6	16q-Amp	0.43	1
Amp_8p11.21	Del_15q15.2	0.43	1
BCOR	15q-Del	0.431	1
RHOA	CREBBP	0.431	1
RHOA	Del_15q22.33	0.431	1
FAM9A	Amp_8p11.23	0.431	1
IQCD	Del_15q22.33	0.431	1
RSPH3	Amp_8p11.23	0.431	1
SMAD4	Del_3p14.2	0.431	1
RB1	Del_1p36.11	0.431	1
LARP4B	Amp_12p13.33	0.431	1
SETD2	9p-Amp	0.431	1
APC	Del_19p13.3	0.432	1
CRIPAK	8p-Amp	0.432	1
CDH1	Amp_8p11.23	0.432	1
FAM9A	Del_10q25.2	0.432	1
NF1	Amp_17q24.1	0.432	1
GRB2	Del_10q25.2	0.432	1
BMPR2	Del_2q22.1	0.432	1
APC	2p-Amp	0.433	1
TP53	IDH1	0.433	1
TXNDC2	7p-Amp	0.433	1
TXNDC2	8q-Amp	0.433	1
SMAD2	Amp_12p13.33	0.433	1
WNT1	22q-Del	0.433	1
WNT1	Del_4p16.1	0.433	1
ALG12	22q-Del	0.433	1
ALG12	Del_4p16.1	0.433	1
C14orf184	Del_4p16.1	0.433	1
CREBBP	Del_10q25.2	0.433	1
20p-Del	Amp_16p11.2	0.433	1
MVK	Amp_12p13.33	0.434	1
PRRG1	15q-Del	0.434	1
IFT57	13q-Amp	0.434	1
TXNDC2	Del_1p33	0.435	1
PRKDC	8p-Amp	0.435	1
L1TD1	Del_22q13.32	0.435	1
TOP2B	Del_1p33	0.435	1
PTEN	1p-Del	0.435	1
12p-Amp	20p-Del	0.435	1
FMN2	Del_2p12	0.436	1
OR4D10	Del_6p25.3	0.436	1
OR4D10	Del_6q26	0.436	1
DDX26B	Del_6q26	0.436	1
DDX26B	Del_19p13.3	0.436	1
13q-Amp	Del_6q26	0.436	1
RNF43	2p-Amp	0.437	1
RNF43	2q-Amp	0.437	1
RNF43	6p-Amp	0.437	1
RNF43	Amp_15q26.1	0.437	1
PRPS1	4q-Del	0.437	1
PRPS1	Amp_11p15.5	0.437	1
PTGDR	12p-Amp	0.437	1
PTGDR	4q-Del	0.437	1
PTGDR	Amp_11p15.5	0.437	1
2p-Amp	4p-Del	0.437	1
2q-Amp	4p-Del	0.437	1
Amp_11p15.5	Del_7q31.1	0.437	1
Del_1p13.2	Del_7q31.1	0.437	1
SMAD2	NF1	0.438	1
SMAD2	FBXW7	0.438	1
FAM9A	Del_14q11.2	0.438	1
FAM9A	Del_15q21.1	0.438	1
BCL9	14q-Del	0.438	1
ZBTB20	12p-Amp	0.438	1
ALPK2	Del_17q24.3	0.438	1
ASXL1	Del_17q24.3	0.438	1
RSPH3	Del_14q11.2	0.438	1
IDH1	Amp_11p15.5	0.438	1
17q-Amp	4q-Del	0.438	1
Del_2q22.1	Del_14q11.2	0.438	1
APC	ALPK2	0.439	1
BCL9	21q-Del	0.439	1
MPHOSPH10	Amp_20p12.1	0.439	1
BCORL1	21q-Del	0.439	1
SLC12A6	21q-Del	0.439	1
SLC12A6	Del_5q21.2	0.439	1
NEXN	Del_3p14.2	0.439	1
Amp_8q24.21	Del_4p16.1	0.439	1
WNT1	Del_5q21.2	0.44	1
MAPK6	5q-Del	0.44	1
MAPK6	Amp_2q33.1	0.44	1
MAPK6	Amp_19q12	0.44	1
MAPK6	Del_3q26.31	0.44	1
IQCD	Del_4q35.1	0.44	1
ALG12	21q-Del	0.44	1
ALG12	Del_5q21.2	0.44	1
PTCH1	Del_4q35.1	0.44	1
PIK3R1	Amp_20p11.21	0.44	1
ROS1	Amp_5p12	0.44	1
C2orf29	5q-Del	0.44	1
C2orf29	Amp_2q33.1	0.44	1
C2orf29	Amp_19q12	0.44	1
SMAD4	Amp_20p11.21	0.44	1
SLC26A8	5q-Del	0.44	1
SLC26A8	Del_3q26.31	0.44	1
L1TD1	Del_16p13.3	0.44	1
FKBP9	5q-Del	0.44	1
FKBP9	Amp_2q33.1	0.44	1
FKBP9	Amp_19q12	0.44	1
C14orf184	21q-Del	0.44	1
ALDH1A3	5q-Del	0.44	1
ALDH1A3	Amp_2q33.1	0.44	1
ALDH1A3	Amp_19q12	0.44	1
ALDH1A3	Del_3q26.31	0.44	1
NEXN	Del_16p13.3	0.44	1
CTNNB1	Amp_2q33.1	0.44	1
CTNNB1	Del_3q26.31	0.44	1
CTNNB1	Del_15q15.2	0.44	1
8p-Amp	Del_10q23.31	0.44	1
Amp_11p15.5	Del_15q22.33	0.44	1
MVK	Amp_16p11.2	0.441	1
SETD2	8p-Del	0.441	1
Amp_13q22.1	Del_3p14.2	0.441	1
CRIPAK	ZNF486	0.442	1
TP53	Del_6q26	0.442	1
ZBTB20	1p-Del	0.442	1
ASXL1	Del_16p13.3	0.442	1
RLIM	17q-Amp	0.442	1
MPHOSPH10	MAP4K3	0.442	1
MPHOSPH10	17q-Amp	0.442	1
SLC26A8	Amp_17q12	0.442	1
RB1	20p-Del	0.442	1
MAP4K3	1p-Del	0.442	1
IDH1	1p-Del	0.442	1
17q-Amp	1p-Del	0.442	1
Amp_8p11.23	Del_4p16.1	0.442	1
NF1	22q-Del	0.443	1
ERBB2	Del_14q11.2	0.443	1
PLEKHF2	14q-Del	0.443	1
IDH1	Amp_13q12.13	0.443	1
Amp_1q31.1	Del_14q11.2	0.443	1
Amp_5p12	Del_10q25.2	0.443	1
Amp_17q24.1	Del_15q21.1	0.443	1
STARD3NL	Amp_5p12	0.444	1
TPRKB	Del_8p22	0.444	1
P2RY13	Amp_5p12	0.444	1
NR1H3	Amp_5p12	0.444	1
DIP2B	SMAD4	0.444	1
PCBP1	Amp_5p12	0.444	1
RBBP7	Amp_8p11.23	0.444	1
DCLK2	Amp_5p12	0.444	1
FYN	Amp_5p12	0.444	1
GMPS	Amp_8p11.23	0.444	1
ZFP36L2	18p-Del	0.445	1
ZFP36L2	Amp_20p11.21	0.445	1
ZFP36L2	Del_18q12.2	0.445	1
SMAD2	FMN2	0.445	1
SMAD2	20p-Amp	0.445	1
ALPK2	2p-Amp	0.445	1
ALPK2	2q-Amp	0.445	1
ALPK2	Amp_15q26.1	0.445	1
ASXL1	2p-Amp	0.445	1
ASXL1	2q-Amp	0.445	1
ASXL1	Amp_15q26.1	0.445	1
CDK12	8q-Amp	0.445	1
20p-Amp	Del_12p13.1	0.445	1
SOX9	PTGDR	0.446	1
ZFP36L2	SMAD2	0.446	1
ZFP36L2	Del_12p13.1	0.446	1
B2M	Del_12p13.1	0.446	1
MLH1	Amp_8p11.21	0.446	1
SMAD2	Del_8q11.1	0.446	1
FAM9A	Del_15q15.2	0.446	1
EGR1	9p-Amp	0.446	1
TPRKB	Del_1p33	0.446	1
ST3GAL6	9p-Amp	0.446	1
ST3GAL6	Del_10q21.1	0.446	1
PLEKHF2	12q-Amp	0.446	1
ASXL1	Del_15q11.2	0.446	1
VCX2	12q-Amp	0.446	1
VCX2	9p-Amp	0.446	1
RBPJ	Del_12p13.1	0.446	1
RBBP7	Del_12p13.1	0.446	1
GMPS	Del_12p13.1	0.446	1
KDM6A	Amp_8q24.21	0.446	1
Amp_2q33.1	Del_15q22.33	0.446	1
Amp_8q24.21	Del_16q23.1	0.446	1
SMAD2	Amp_8p11.21	0.447	1
OR4D10	22q-Del	0.447	1
PTCH1	Del_16q23.1	0.447	1
DDX26B	22q-Del	0.447	1
BMPR2	Del_10q23.31	0.447	1
9p-Amp	Del_3p14.2	0.447	1
TXNDC2	Del_1p36.11	0.448	1
ACVR1B	9p-Amp	0.448	1
BMPR2	Del_5q21.2	0.448	1
KDM6A	12q-Amp	0.448	1
Del_3q26.31	Del_18q21.2	0.448	1
APC	MAPK6	0.449	1
APC	SLC26A8	0.449	1
APC	FKBP9	0.449	1
FAM123B	8p-Amp	0.449	1
FAM123B	Del_3p26.3	0.449	1
MLH1	Del_3p26.3	0.449	1
18q-Del	Amp_19q12	0.449	1
18q-Del	Del_3q26.31	0.449	1
TP53	WNT1	0.45	1
TP53	ALG12	0.45	1
ERBB2	Del_4q22.1	0.45	1
ERBB2	Del_6p25.3	0.45	1
ERBB2	Del_19p13.3	0.45	1
SLC12A6	Del_21q11.2	0.45	1
Amp_1q31.1	Del_4q22.1	0.45	1
SMAD2	Amp_20p11.21	0.451	1
WNT1	7p-Amp	0.451	1
WNT1	8q-Amp	0.451	1
SELPLG	Del_21q11.2	0.451	1
ALG12	7p-Amp	0.451	1
SLC26A8	Del_21q11.2	0.451	1
12p-Amp	Del_3p14.2	0.451	1
Amp_8p11.23	Del_3p26.3	0.451	1
Amp_8p11.21	Del_15q22.33	0.451	1
Amp_20p11.21	Del_12p13.1	0.451	1
APC	Amp_12p13.33	0.452	1
SOX9	ZBTB20	0.452	1
SOX9	MAP4K3	0.452	1
SOX9	17q-Amp	0.452	1
CDH1	7p-Amp	0.452	1
OR4D10	Amp_6p21.1	0.452	1
OR4D10	Del_3p26.3	0.452	1
PRKDC	8p-Del	0.452	1
CHUK	DDX26B	0.452	1
MGA	5q-Del	0.452	1
MGA	Amp_19q12	0.452	1
ZBTB20	Del_5q23.3	0.452	1
PTCH1	Amp_6p21.1	0.452	1
DDX26B	Amp_6p21.1	0.452	1
DDX26B	Del_3p26.3	0.452	1
RB1	Amp_6p21.1	0.452	1
NEXN	Del_5q12.1	0.452	1
17q-Amp	Del_5q23.3	0.452	1
14q-Del	Amp_17q12	0.452	1
Amp_2q33.1	Del_5q12.1	0.452	1
Amp_10q22.3	Del_5q22.2	0.452	1
Amp_19q12	Del_5q12.1	0.452	1
APC	LARP4B	0.453	1
FMN2	Del_1p36.11	0.453	1
RPTN	Del_14q11.2	0.453	1
GRB2	Del_1p36.11	0.453	1
RSPH3	Del_1p36.11	0.453	1
RBPJ	Del_14q11.2	0.453	1
RBBP7	Del_14q11.2	0.453	1
RBBP7	Del_15q21.1	0.453	1
CDH1	Del_15q21.1	0.454	1
SELPLG	20p-Amp	0.454	1
SELPLG	Del_8p23.2	0.454	1
FAM9A	20p-Del	0.454	1
GRB2	20p-Del	0.454	1
RSPH3	20p-Del	0.454	1
C2orf29	Del_8p23.2	0.454	1
SETD2	2p-Amp	0.454	1
SETD2	2q-Amp	0.454	1
SETD2	Amp_15q26.1	0.454	1
20p-Amp	Del_16p13.3	0.454	1
20p-Del	Del_2q22.1	0.454	1
Del_3p14.2	Del_5q21.2	0.454	1
FAM123B	Del_2p12	0.455	1
ACVR1B	IQCD	0.455	1
ACVR1B	ZNF486	0.455	1
MLH1	Del_2p12	0.455	1
SELPLG	Amp_13q22.1	0.455	1
RHOA	KDM6A	0.455	1
IQCD	KDM6A	0.455	1
PTEN	12q-Amp	0.455	1
SLC12A6	Amp_10q22.3	0.455	1
ZNF486	KDM6A	0.455	1
17q-Amp	Del_21q21.1	0.455	1
Amp_16p11.2	Del_15q22.33	0.455	1
TXNDC2	20q-Amp	0.456	1
SELPLG	8p-Del	0.456	1
MAPK6	8p-Del	0.456	1
Amp_1q31.1	Del_8p23.2	0.456	1
GGT1	ERBB2	0.457	1
GGT1	Amp_1q31.1	0.457	1
NF2	Del_3q26.31	0.457	1
TPRKB	Amp_17q24.1	0.457	1
ERBB2	HIST1H1T	0.457	1
2p-Amp	Del_18q12.2	0.457	1
2q-Amp	Del_18q12.2	0.457	1
8p-Amp	Del_16q23.1	0.457	1
Amp_17q24.1	Del_15q15.2	0.457	1
RNF43	Del_10q23.31	0.458	1
BCOR	VCX2	0.458	1
EGR1	Del_17q24.3	0.458	1
ST3GAL6	Del_17q24.3	0.458	1
IQCD	Del_4q22.1	0.458	1
PLEKHF2	Del_17q24.3	0.458	1
DIP2B	VCX2	0.458	1
VCX2	Del_17q24.3	0.458	1
SMAD4	20p-Amp	0.458	1
SMAD4	Del_8p23.2	0.458	1
ZNF486	Del_4q22.1	0.458	1
Amp_8p11.21	Del_10q21.1	0.458	1
FAM123B	9p-Amp	0.459	1
FAM123B	Del_10q21.1	0.459	1
TXNDC2	PCBP1	0.459	1
TXNDC2	FYN	0.459	1
TXNDC2	BIRC3	0.459	1
MLH1	Del_10q21.1	0.459	1
STARD3NL	Del_6q26	0.459	1
P2RY13	Del_6q26	0.459	1
NR1H3	Del_6q26	0.459	1
NR1H3	Del_19p13.3	0.459	1
SLC26A8	Del_16p13.3	0.459	1
DCLK2	Del_6q26	0.459	1
DCLK2	Del_19p13.3	0.459	1
FYN	Del_6p25.3	0.459	1
FYN	Del_6q26	0.459	1
FYN	Del_19p13.3	0.459	1
GPATCH8	Del_6p25.3	0.459	1
GPATCH8	Del_6q26	0.459	1
GPATCH8	Del_19p13.3	0.459	1
BIRC3	Del_6q26	0.459	1
BIRC3	Del_19p13.3	0.459	1
16q-Amp	Del_6p25.3	0.459	1
16q-Amp	Del_6q26	0.459	1
ATXN3L	MPHOSPH10	0.46	1
RLIM	Amp_2q33.1	0.46	1
MPHOSPH10	5q-Del	0.46	1
MPHOSPH10	Amp_2q33.1	0.46	1
MPHOSPH10	Del_3q26.31	0.46	1
RB1	7p-Amp	0.46	1
C14orf184	Del_18p11.31	0.46	1
NEXN	1p-Del	0.46	1
PRPS1	Amp_13q22.1	0.46	1
GMNN	Del_22q13.32	0.46	1
1p-Del	Amp_2q33.1	0.46	1
RLIM	4p-Del	0.461	1
Amp_8q24.21	Del_12p13.1	0.461	1
Amp_13q12.2	Del_6p25.3	0.461	1
ARID1A	Amp_12p13.33	0.462	1
RBBP7	Del_15q15.2	0.462	1
2q-Amp	Del_3p14.2	0.462	1
ZFP36L2	17q-Amp	0.463	1
B2M	IDH1	0.463	1
B2M	17q-Amp	0.463	1
FAM9A	7p-Amp	0.463	1
RPTN	17q-Amp	0.463	1
TPRKB	Del_15q11.2	0.463	1
ZBTB20	16p-Amp	0.463	1
ZBTB20	Del_8q11.1	0.463	1
RSPH3	7p-Amp	0.463	1
C2orf29	Amp_13q12.2	0.463	1
RBBP7	17q-Amp	0.463	1
HLA-A	17q-Amp	0.463	1
MAP4K3	16p-Amp	0.463	1
MAP4K3	Del_8q11.1	0.463	1
GMPS	17q-Amp	0.463	1
IDH1	16p-Amp	0.463	1
17q-Amp	Del_8q11.1	0.463	1
9p-Amp	Del_5q12.1	0.463	1
4q-Del	Amp_8q24.21	0.463	1
ERBB2	Del_1p33	0.464	1
BIRC3	7q-Amp	0.464	1
Amp_17q24.1	Del_1p33	0.464	1
ATXN3L	12p-Amp	0.465	1
ATXN3L	4q-Del	0.465	1
PTCH1	12p-Amp	0.465	1
RBBP7	Amp_8p11.21	0.465	1
L1TD1	12p-Amp	0.465	1
L1TD1	Amp_11p15.5	0.465	1
L1TD1	Del_1p13.2	0.465	1
NEXN	12p-Amp	0.465	1
GMPS	Amp_8p11.21	0.465	1
PRPS1	Del_10q23.31	0.465	1
PTGDR	Del_10q23.31	0.465	1
12p-Amp	Del_3q26.31	0.465	1
4q-Del	Amp_19q12	0.465	1
Amp_1q31.1	Del_21q21.1	0.465	1
Amp_8p11.21	Del_8q11.1	0.465	1
Amp_11p15.5	Del_3q26.31	0.465	1
Amp_13q12.2	Del_7q31.1	0.465	1
Amp_19q12	Del_1p13.2	0.465	1
TXNDC2	Del_10q25.2	0.466	1
ACVR1B	Del_17q24.3	0.466	1
OR4D10	20p-Amp	0.466	1
ZBTB20	Amp_12p13.33	0.466	1
GRB2	CDK12	0.466	1
TOP2B	Del_10q25.2	0.466	1
CDK12	Del_2q22.1	0.466	1
HIST1H1T	Amp_20p12.1	0.466	1
IDH1	15q-Del	0.466	1
KDM6A	Del_17q24.3	0.466	1
17q-Amp	15q-Del	0.466	1
GGT1	BMPR2	0.467	1
TPRKB	Del_10q25.2	0.467	1
HIST1H1T	Del_10q25.2	0.467	1
SELPLG	Del_3p14.2	0.468	1
OR4D10	Del_12p13.1	0.468	1
MAPK6	Del_3p14.2	0.468	1
RHOA	Amp_16p11.2	0.468	1
IQCD	Amp_16p11.2	0.468	1
IFT57	Amp_16p11.2	0.468	1
ALDH1A3	Del_3p14.2	0.468	1
9p-Amp	Amp_16p11.2	0.468	1
Amp_16p11.2	Del_10q21.1	0.468	1
FMN2	Del_1p33	0.469	1
MVK	Amp_5p12	0.469	1
NLRC4	7q-Amp	0.469	1
PCBP1	17p-Del	0.469	1
ROS1	Del_19p13.3	0.469	1
12p-Amp	Del_8p22	0.469	1
Amp_5p12	Amp_10q22.3	0.469	1
PTEN	Amp_8q24.21	0.47	1
ALDH1A3	Amp_8q24.21	0.47	1
LARP4B	Del_3p14.2	0.47	1
8p-Amp	Del_15q22.33	0.47	1
Amp_19q12	Del_18q22.1	0.47	1
CRIPAK	PLEKHF2	0.471	1
FBXW7	8q-Amp	0.471	1
MGA	2p-Amp	0.471	1
MGA	2q-Amp	0.471	1
MGA	6p-Amp	0.471	1
MGA	4q-Del	0.471	1
NR1H3	8q-Amp	0.471	1
DCLK2	7p-Amp	0.471	1
DCLK2	8q-Amp	0.471	1
ATM	Del_6p25.3	0.471	1
6p-Amp	Del_5q12.1	0.471	1
7q-Amp	Del_1p33	0.471	1
8p-Amp	Del_15q15.2	0.471	1
FAM123B	MVK	0.472	1
ZFP36L2	Del_1p36.11	0.472	1
CDH1	Del_3p14.2	0.472	1
MLH1	Amp_10q22.3	0.472	1
SELPLG	Del_22q13.32	0.472	1
RLIM	13q-Amp	0.472	1
C2orf29	Del_22q13.32	0.472	1
RBPJ	Del_1p36.11	0.472	1
RB1	Del_1p33	0.472	1
GMNN	Del_4q35.1	0.472	1
13q-Amp	1p-Del	0.472	1
16p-Amp	Del_1p36.11	0.472	1
ALPK2	1p-Del	0.473	1
ASXL1	1p-Del	0.473	1
ROS1	16q-Amp	0.473	1
CTNNB1	Amp_10q22.3	0.473	1
NF2	Amp_12p13.33	0.474	1
ERBB2	Amp_6p21.1	0.474	1
ERBB2	Del_3p26.3	0.474	1
PTCH1	Amp_15q26.1	0.474	1
NLRC4	Del_22q13.32	0.474	1
C11orf30	Amp_17q24.1	0.474	1
RB1	2p-Amp	0.474	1
RB1	2q-Amp	0.474	1
C14orf184	Del_8p22	0.474	1
SLC12A6	Del_22q13.32	0.474	1
20p-Amp	Del_5q22.2	0.474	1
Amp_12p13.33	Del_4q35.1	0.474	1
CHUK	NR1H3	0.475	1
CHUK	16q-Amp	0.475	1
P2RY13	Amp_6p21.1	0.475	1
NR1H3	C11orf30	0.475	1
NR1H3	Del_3p26.3	0.475	1
C11orf30	16q-Amp	0.475	1
PCBP1	Amp_6p21.1	0.475	1
PIK3R1	Del_4q22.1	0.475	1
DCLK2	Amp_6p21.1	0.475	1
DCLK2	Del_3p26.3	0.475	1
GPATCH8	Amp_6p21.1	0.475	1
GPATCH8	Del_3p26.3	0.475	1
BIRC3	Amp_6p21.1	0.475	1
TP53	IQCD	0.476	1
ACVR1B	PTEN	0.476	1
CDH1	17q-Amp	0.476	1
RHOA	15q-Del	0.476	1
MGA	21q-Del	0.476	1
IQCD	15q-Del	0.476	1
IFT57	Amp_12p13.33	0.476	1
ZNF486	Amp_12p13.33	0.476	1
8q-Amp	Del_16p13.3	0.476	1
Amp_17q12	Del_10q23.31	0.476	1
CDH1	Del_15q15.2	0.477	1
THOC7	12q-Amp	0.477	1
THOC7	9p-Amp	0.477	1
PLEKHF2	Del_15q22.33	0.477	1
GRB2	12q-Amp	0.477	1
GRB2	Del_10q21.1	0.477	1
RSPH3	12q-Amp	0.477	1
CRIPAK	SETD2	0.478	1
FMN2	17q-Amp	0.478	1
SELPLG	1p-Del	0.478	1
MAPK6	1p-Del	0.478	1
MPHOSPH10	C2orf29	0.478	1
MPHOSPH10	Del_16p13.3	0.478	1
C2orf29	1p-Del	0.478	1
SLC26A8	1p-Del	0.478	1
FKBP9	1p-Del	0.478	1
CDK12	Del_21q11.2	0.478	1
RHOA	20p-Amp	0.479	1
ATXN3L	Del_5q23.3	0.479	1
NEXN	Del_5q23.3	0.479	1
ZNF486	20p-Amp	0.479	1
Amp_2q33.1	Del_5q23.3	0.479	1
ZFP36L2	5q-Del	0.48	1
ZFP36L2	Amp_19q12	0.48	1
B2M	ATXN3L	0.48	1
B2M	5q-Del	0.48	1
B2M	Amp_19q12	0.48	1
B2M	Del_3q26.31	0.48	1
RPTN	Amp_2q33.1	0.48	1
RPTN	Del_3q26.31	0.48	1
CHUK	7p-Amp	0.48	1
CHUK	8q-Amp	0.48	1
ATXN3L	16p-Amp	0.48	1
RBPJ	5q-Del	0.48	1
RBPJ	Del_3q26.31	0.48	1
RBBP7	5q-Del	0.48	1
RBBP7	Amp_2q33.1	0.48	1
RBBP7	Amp_19q12	0.48	1
L1TD1	16p-Amp	0.48	1
L1TD1	Del_8q11.1	0.48	1
HLA-A	5q-Del	0.48	1
HLA-A	Amp_2q33.1	0.48	1
HLA-A	Amp_19q12	0.48	1
NEXN	16p-Amp	0.48	1
NEXN	Del_8q11.1	0.48	1
GMPS	5q-Del	0.48	1
GMPS	Amp_2q33.1	0.48	1
GMPS	Amp_19q12	0.48	1
GMPS	Del_3q26.31	0.48	1
12p-Amp	Del_1p36.11	0.48	1
12p-Amp	Del_10q21.1	0.48	1
12q-Amp	Del_1p13.2	0.48	1
16p-Amp	Amp_2q33.1	0.48	1
17q-Amp	Del_10q23.31	0.48	1
2p-Amp	4q-Del	0.48	1
2p-Amp	Del_1p13.2	0.48	1
2q-Amp	4q-Del	0.48	1
2q-Amp	Del_1p13.2	0.48	1
6p-Amp	Del_1p13.2	0.48	1
9p-Amp	4q-Del	0.48	1
9p-Amp	Del_1p13.2	0.48	1
15q-Del	Amp_1q31.1	0.48	1
5q-Del	Del_8q11.1	0.48	1
Amp_2q33.1	Del_8q11.1	0.48	1
Amp_12p13.33	Amp_17q24.1	0.48	1
B2M	8p-Amp	0.481	1
MLH1	Del_12p13.1	0.481	1
SELPLG	Del_5q12.1	0.481	1
MAPK6	Del_5q12.1	0.481	1
RPTN	8p-Amp	0.481	1
RPTN	Del_17p12	0.481	1
ROS1	Del_2p12	0.481	1
SLC26A8	Del_5q12.1	0.481	1
PTGDR	Amp_20p11.21	0.481	1
TXNDC2	22q-Del	0.482	1
TXNDC2	Del_4p16.1	0.482	1
TOP2B	Del_4p16.1	0.482	1
PTEN	Amp_2q33.1	0.482	1
PRPS1	Amp_20q13.12	0.482	1
PTGDR	Amp_20q13.12	0.482	1
IDH1	Amp_20p12.1	0.482	1
22q-Del	Del_6p25.3	0.482	1
Amp_19q12	Del_18p11.31	0.482	1
ACVR1B	VCX2	0.483	1
SMAD2	Del_1p33	0.483	1
EGR1	KDM6A	0.483	1
VCX2	Del_16q23.1	0.483	1
GMNN	Del_4q22.1	0.483	1
Amp_1q31.1	Del_18q21.2	0.483	1
ARID1A	20p-Del	0.484	1
TP53	OR4D10	0.484	1
TXNDC2	Amp_10q22.3	0.484	1
CHUK	Del_1p36.11	0.484	1
MVK	Del_6p25.3	0.484	1
MVK	Del_6q26	0.484	1
MVK	Del_19p13.3	0.484	1
ERBB2	Amp_1q31.1	0.484	1
P2RY13	22q-Del	0.484	1
P2RY13	Del_4p16.1	0.484	1
NR1H3	22q-Del	0.484	1
NR1H3	Del_4p16.1	0.484	1
PRRG1	Del_6p25.3	0.484	1
PRRG1	Del_6q26	0.484	1
PRRG1	Del_19p13.3	0.484	1
DCLK2	22q-Del	0.484	1
DCLK2	Del_4p16.1	0.484	1
BMPR2	Del_1p33	0.484	1
FYN	22q-Del	0.484	1
FYN	Del_4p16.1	0.484	1
PRPS1	Del_1p33	0.484	1
BIRC3	22q-Del	0.484	1
CTNNB1	Del_16p13.3	0.484	1
Amp_10q22.3	Amp_20p11.21	0.484	1
Del_1p33	Del_7q31.1	0.484	1
CRIPAK	ACVR1B	0.485	1
CRIPAK	Del_16q23.1	0.485	1
WNT1	4p-Del	0.485	1
SELPLG	18p-Del	0.485	1
OR4D10	IDH1	0.485	1
OR4D10	17q-Amp	0.485	1
MAPK6	Amp_20p11.21	0.485	1
ST3GAL6	Del_4q35.1	0.485	1
ALG12	4p-Del	0.485	1
PIK3R1	17p-Del	0.485	1
VCX2	Del_4q35.1	0.485	1
C2orf29	18p-Del	0.485	1
DDX26B	IDH1	0.485	1
DDX26B	17q-Amp	0.485	1
SMAD4	Del_16p13.3	0.485	1
C14orf184	4p-Del	0.485	1
HIST1H1T	Amp_8p11.23	0.485	1
SOX9	ROS1	0.486	1
ROS1	Del_5q23.3	0.486	1
TXNDC2	18p-Del	0.487	1
TXNDC2	Amp_20p11.21	0.487	1
NF2	8p-Amp	0.487	1
PLAGL2	Amp_20p12.1	0.487	1
DIP2B	Amp_16p11.2	0.487	1
RB1	Amp_16p11.2	0.487	1
LARP4B	Amp_16p11.2	0.487	1
BCORL1	Del_15q22.33	0.487	1
7q-Amp	Amp_11p15.5	0.487	1
SOX9	6p-Amp	0.488	1
SOX9	Amp_15q26.1	0.488	1
OR4D10	Amp_8p11.23	0.488	1
ATXN3L	7q-Amp	0.488	1
ALPK2	Del_16q23.1	0.488	1
PLAGL2	22q-Del	0.488	1
PLAGL2	Del_4p16.1	0.488	1
PTEN	8p-Del	0.488	1
2p-Amp	Del_5q23.3	0.488	1
2q-Amp	Del_5q23.3	0.488	1
22q-Del	Del_2p12	0.488	1
Amp_15q26.1	Del_5q23.3	0.488	1
FAM9A	Del_17q24.3	0.489	1
FBXW7	ERBB2	0.489	1
TPRKB	20p-Del	0.489	1
BCL9	Del_10q21.1	0.489	1
GRB2	Del_17q24.3	0.489	1
NLRC4	12q-Amp	0.489	1
NLRC4	Del_10q21.1	0.489	1
RLIM	Amp_13q12.13	0.489	1
LARP4B	Del_2q22.1	0.489	1
BCORL1	9p-Amp	0.489	1
BCORL1	Del_10q21.1	0.489	1
SLC12A6	9p-Amp	0.489	1
7q-Amp	Del_7q31.1	0.489	1
8q-Amp	Del_10q25.2	0.489	1
CDH1	FYN	0.49	1
CDH1	16q-Amp	0.49	1
ZBTB20	Del_5q22.2	0.49	1
L1TD1	Del_21q21.1	0.49	1
BMPR2	Amp_6p21.1	0.49	1
MAP4K3	Del_5q22.2	0.49	1
12p-Amp	4q-Del	0.49	1
17q-Amp	Del_5q22.2	0.49	1
Amp_19q12	Del_21q21.1	0.49	1
TP53	SLC26A8	0.491	1
SOX9	Del_5q12.1	0.491	1
STARD3NL	Del_12p13.1	0.491	1
P2RY13	Del_12p13.1	0.491	1
IQCD	Amp_8q24.21	0.491	1
PCBP1	Del_12p13.1	0.491	1
DCLK2	Del_12p13.1	0.491	1
FYN	Del_12p13.1	0.491	1
ZNF486	Amp_8q24.21	0.491	1
16q-Amp	Del_12p13.1	0.491	1
APC	Amp_2q33.1	0.492	1
RNF43	Del_8q11.1	0.492	1
ZFP36L2	4p-Del	0.492	1
RBPJ	4p-Del	0.492	1
RBBP7	4p-Del	0.492	1
HLA-A	4p-Del	0.492	1
WNT1	ASXL1	0.493	1
WNT1	Amp_17q12	0.493	1
FAM9A	14q-Del	0.493	1
MGA	8q-Amp	0.493	1
ASXL1	C14orf184	0.493	1
ALG12	Amp_17q12	0.493	1
RSPH3	14q-Del	0.493	1
CTNNB1	Del_19p13.3	0.493	1
14q-Del	Del_2q22.1	0.493	1
CRIPAK	Del_1p36.11	0.494	1
TXNDC2	18q-Del	0.494	1
STARD3NL	13q-Amp	0.494	1
STARD3NL	Del_5q21.2	0.494	1
SELPLG	12p-Amp	0.494	1
SELPLG	4q-Del	0.494	1
ERBB2	Del_7q31.1	0.494	1
NR1H3	21q-Del	0.494	1
PCBP1	13q-Amp	0.494	1
PCBP1	21q-Del	0.494	1
IFT57	Del_5q22.2	0.494	1
C2orf29	4q-Del	0.494	1
DCLK2	21q-Del	0.494	1
FKBP9	Del_1p13.2	0.494	1
FYN	13q-Amp	0.494	1
FYN	Del_5q21.2	0.494	1
ALDH1A3	Del_1p13.2	0.494	1
GPATCH8	21q-Del	0.494	1
MAP4K3	Amp_8p11.21	0.494	1
PRPS1	Amp_1q31.1	0.494	1
PRPS1	Amp_17q24.1	0.494	1
PTGDR	Amp_1q31.1	0.494	1
PTGDR	Amp_17q24.1	0.494	1
ZNF486	Del_5q22.2	0.494	1
16q-Amp	21q-Del	0.494	1
16q-Amp	Del_5q21.2	0.494	1
Amp_11p15.5	Del_16p13.3	0.494	1
PRKDC	Amp_8p11.23	0.495	1
SETD2	Del_10q23.31	0.495	1
HIST1H1T	20p-Amp	0.495	1
GMNN	Amp_12p13.33	0.495	1
9p-Amp	14q-Del	0.495	1
4p-Del	Amp_8q24.21	0.495	1
Del_16q23.1	Del_18q22.1	0.495	1
ARID1A	Del_14q11.2	0.496	1
TXNDC2	Del_8p23.2	0.496	1
SMAD2	PTCH1	0.496	1
IFT57	Amp_5p12	0.496	1
TOP2B	Del_5q21.2	0.496	1
CREBBP	22q-Del	0.496	1
CREBBP	Del_4p16.1	0.496	1
EGR1	Amp_16p11.2	0.497	1
ST3GAL6	Amp_16p11.2	0.497	1
PIK3R1	Del_15q11.2	0.497	1
VCX2	Amp_16p11.2	0.497	1
ATM	2p-Amp	0.497	1
ATM	2q-Amp	0.497	1
MLH1	22q-Del	0.498	1
MLH1	Del_4p16.1	0.498	1
MPHOSPH10	1p-Del	0.498	1
IDH1	Amp_13q12.2	0.498	1
CREBBP	Del_5q22.2	0.498	1
12p-Amp	Del_5q21.2	0.498	1
Amp_20p12.1	Del_8q11.1	0.498	1
ZFP36L2	Del_16p13.3	0.499	1
B2M	SELPLG	0.499	1
B2M	Del_16p13.3	0.499	1
SMAD2	Amp_1q31.1	0.499	1
SMAD2	Amp_17q24.1	0.499	1
SELPLG	16p-Amp	0.499	1
SELPLG	Del_8q11.1	0.499	1
MAPK6	16p-Amp	0.499	1
MAPK6	Del_8q11.1	0.499	1
RPTN	ALDH1A3	0.499	1
RPTN	Del_16p13.3	0.499	1
CHUK	MVK	0.499	1
CHUK	Amp_10q22.3	0.499	1
MVK	Amp_6p21.1	0.499	1
MVK	Del_3p26.3	0.499	1
PTCH1	Del_5q23.3	0.499	1
C11orf30	Amp_10q22.3	0.499	1
PRRG1	Del_3p26.3	0.499	1
C2orf29	RBPJ	0.499	1
C2orf29	HLA-A	0.499	1
C2orf29	16p-Amp	0.499	1
RBPJ	Del_16p13.3	0.499	1
SLC26A8	16p-Amp	0.499	1
SLC26A8	Del_8q11.1	0.499	1
RBBP7	Del_16p13.3	0.499	1
TOP2B	20p-Del	0.499	1
FKBP9	16p-Amp	0.499	1
FKBP9	Del_8q11.1	0.499	1
HLA-A	Del_16p13.3	0.499	1
ALDH1A3	16p-Amp	0.499	1
20p-Del	Del_19p13.3	0.499	1
Amp_8p11.21	Del_10q23.31	0.5	1
Amp_13q12.13	Del_2p12	0.5	1
CDH1	Del_5q12.1	0.501	1
ATXN3L	Amp_12p13.33	0.501	1
GRB2	Del_21q11.2	0.501	1
RSPH3	Del_21q11.2	0.501	1
NEXN	Amp_12p13.33	0.501	1
2p-Amp	18q-Del	0.501	1
2q-Amp	18q-Del	0.501	1
Amp_12p13.33	Del_3q26.31	0.501	1
CRIPAK	THOC7	0.502	1
CRIPAK	GRB2	0.502	1
CRIPAK	RSPH3	0.502	1
CRIPAK	Del_2q22.1	0.502	1
OR4D10	5q-Del	0.502	1
OR4D10	Amp_2q33.1	0.502	1
ERBB2	Del_8p22	0.502	1
DDX26B	5q-Del	0.502	1
DDX26B	Amp_2q33.1	0.502	1
DDX26B	Amp_19q12	0.502	1
DDX26B	Del_3q26.31	0.502	1
CDH1	BCORL1	0.503	1
BCOR	Del_1p13.2	0.503	1
FMN2	Del_16q23.1	0.503	1
ST3GAL6	Del_4q22.1	0.503	1
PLEKHF2	Del_4q22.1	0.503	1
DIP2B	12p-Amp	0.503	1
MPHOSPH10	8p-Del	0.503	1
KDM6A	8p-Del	0.503	1
12p-Amp	Del_17q24.3	0.503	1
21q-Del	8p-Del	0.503	1
8p-Del	Del_3p26.3	0.503	1
Amp_11p15.5	Del_17q24.3	0.503	1
Del_1p13.2	Del_17q24.3	0.503	1
NF2	20p-Del	0.504	1
BMPR2	Del_7q31.1	0.504	1
PRPS1	Del_10q25.2	0.504	1
PTGDR	Del_10q25.2	0.504	1
7p-Amp	Del_21q11.2	0.504	1
7q-Amp	8p-Del	0.504	1
CRIPAK	Amp_16p11.2	0.505	1
ZFP36L2	ASXL1	0.505	1
ATXN3L	Del_8p22	0.505	1
ALPK2	16p-Amp	0.505	1
ALPK2	Del_8q11.1	0.505	1
ASXL1	Del_8q11.1	0.505	1
RBPJ	Amp_17q12	0.505	1
GMPS	Amp_17q12	0.505	1
KDM6A	Del_16q23.1	0.505	1
20q-Amp	Del_3q26.31	0.505	1
2p-Amp	8p-Del	0.505	1
2q-Amp	8p-Del	0.505	1
6p-Amp	8p-Del	0.505	1
CDH1	7q-Amp	0.506	1
THOC7	ATM	0.506	1
FBXW7	16p-Amp	0.506	1
ASXL1	8p-Amp	0.506	1
ATM	12p-Amp	0.506	1
ATM	Del_2q22.1	0.506	1
HIST1H1T	Amp_8q24.21	0.506	1
SOX9	SELPLG	0.507	1
SOX9	ALDH1A3	0.507	1
STARD3NL	IDH1	0.507	1
STARD3NL	17q-Amp	0.507	1
SELPLG	Del_5q23.3	0.507	1
MAPK6	Del_5q23.3	0.507	1
NR1H3	IDH1	0.507	1
NR1H3	17q-Amp	0.507	1
PCBP1	MAP4K3	0.507	1
PCBP1	17q-Amp	0.507	1
DCLK2	17q-Amp	0.507	1
FKBP9	Del_5q23.3	0.507	1
FYN	IDH1	0.507	1
FYN	17q-Amp	0.507	1
ALDH1A3	Del_5q23.3	0.507	1
GPATCH8	17q-Amp	0.507	1
MAP4K3	16q-Amp	0.507	1
NEXN	Del_10q23.31	0.507	1
BIRC3	IDH1	0.507	1
BIRC3	17q-Amp	0.507	1
IDH1	16q-Amp	0.507	1
GMNN	Del_5q22.2	0.507	1
13q-Amp	Del_10q23.31	0.507	1
2p-Amp	Del_10q23.31	0.507	1
2q-Amp	Del_10q23.31	0.507	1
6p-Amp	Del_10q23.31	0.507	1
Amp_2q33.1	Del_10q23.31	0.507	1
Amp_15q26.1	Del_10q23.31	0.507	1
Amp_16p11.2	Del_21q21.1	0.507	1
Amp_20p12.1	Del_10q23.31	0.507	1
Del_3q26.31	Del_10q23.31	0.507	1
THOC7	Amp_13q22.1	0.508	1
PLEKHF2	Del_8p22	0.508	1
PTCH1	16p-Amp	0.508	1
VCX2	Del_8p22	0.508	1
BCORL1	Del_17q24.3	0.508	1
12q-Amp	Del_21q11.2	0.508	1
CDH1	22q-Del	0.509	1
WNT1	Del_3p14.2	0.509	1
ZBTB20	Del_1p33	0.509	1
TXNDC2	RHOA	0.51	1
TXNDC2	IFT57	0.51	1
TXNDC2	ZNF486	0.51	1
RHOA	Del_6q26	0.51	1
RHOA	Del_19p13.3	0.51	1
BCL9	8p-Amp	0.51	1
IQCD	Del_6p25.3	0.51	1
IQCD	Del_6q26	0.51	1
IQCD	Del_19p13.3	0.51	1
NLRC4	VCX2	0.51	1
NLRC4	8p-Amp	0.51	1
IFT57	Del_6p25.3	0.51	1
IFT57	Del_6q26	0.51	1
IFT57	Del_19p13.3	0.51	1
VCX2	BCORL1	0.51	1
PTEN	16p-Amp	0.51	1
ZNF486	Del_6q26	0.51	1
ARID1A	Del_5q22.2	0.511	1
SOX9	Amp_11p15.5	0.511	1
GGT1	9p-Amp	0.511	1
GGT1	Del_10q21.1	0.511	1
MGA	1p-Del	0.511	1
TPRKB	Del_10q21.1	0.511	1
RLIM	Del_22q13.32	0.511	1
VCX2	Del_21q21.1	0.511	1
HIST1H1T	12q-Amp	0.511	1
HIST1H1T	9p-Amp	0.511	1
HIST1H1T	Del_10q21.1	0.511	1
CDH1	Del_1p33	0.512	1
NF2	4p-Del	0.512	1
ROS1	Amp_10q22.3	0.512	1
CTNNB1	Amp_8p11.21	0.512	1
FAM123B	IFT57	0.513	1
FMN2	Del_3q26.31	0.513	1
ACVR1B	THOC7	0.514	1
ACVR1B	GRB2	0.514	1
ACVR1B	Del_2q22.1	0.514	1
MLH1	MAP4K3	0.514	1
MLH1	17q-Amp	0.514	1
THOC7	KDM6A	0.514	1
PRRG1	7q-Amp	0.514	1
RSPH3	Del_16q23.1	0.514	1
DDX26B	8p-Amp	0.514	1
BMPR2	Del_12p13.1	0.514	1
KDM6A	Del_2q22.1	0.514	1
Amp_8q24.21	Del_6q26	0.514	1
CRIPAK	MLH1	0.515	1
SMAD2	MVK	0.515	1
SMAD2	Amp_10q22.3	0.515	1
MVK	Del_12p13.1	0.515	1
C2orf29	Del_4q22.1	0.515	1
ATM	8p-Amp	0.515	1
14q-Del	Amp_8q24.21	0.515	1
ALG12	20p-Amp	0.516	1
PIK3R1	Del_2p12	0.516	1
RB1	Del_10q21.1	0.516	1
C14orf184	20p-Amp	0.516	1
C14orf184	Del_8p23.2	0.516	1
CDK12	Del_6p25.3	0.516	1
MLH1	Del_1p33	0.517	1
THOC7	Del_22q13.32	0.517	1
FBXW7	Amp_8p11.21	0.517	1
ROS1	Del_15q11.2	0.517	1
SETD2	16p-Amp	0.517	1
SETD2	Del_8q11.1	0.517	1
CDK12	Del_15q11.2	0.517	1
Del_5q22.2	Del_16q23.1	0.517	1
ZFP36L2	RLIM	0.518	1
ZFP36L2	1p-Del	0.518	1
B2M	RLIM	0.518	1
B2M	1p-Del	0.518	1
CDH1	5q-Del	0.518	1
WNT1	Del_5q12.1	0.518	1
NF2	Del_5q22.2	0.518	1
RPTN	RLIM	0.518	1
RPTN	1p-Del	0.518	1
ALG12	Del_5q12.1	0.518	1
RLIM	16p-Amp	0.518	1
ROS1	9p-Amp	0.518	1
MPHOSPH10	16p-Amp	0.518	1
MPHOSPH10	Del_8q11.1	0.518	1
RBBP7	1p-Del	0.518	1
TOP2B	Del_21q11.2	0.518	1
C14orf184	Del_5q12.1	0.518	1
HLA-A	1p-Del	0.518	1
GMPS	1p-Del	0.518	1
16p-Amp	1p-Del	0.518	1
15q-Del	Amp_8p11.23	0.518	1
APC	GPATCH8	0.519	1
APC	16q-Amp	0.519	1
ACVR1B	Del_3p14.2	0.519	1
MLH1	GMNN	0.519	1
ASXL1	Del_15q22.33	0.519	1
CDK12	Del_15q22.33	0.519	1
SOX9	BCOR	0.52	1
SOX9	DIP2B	0.52	1
PLEKHF2	15q-Del	0.52	1
ASXL1	Del_1p33	0.52	1
C2orf29	DDX26B	0.52	1
DDX26B	Del_16p13.3	0.52	1
CREBBP	Del_4q35.1	0.52	1
15q-Del	Amp_16p11.2	0.52	1
Amp_5p12	Del_15q22.33	0.52	1
PIK3R1	Del_5q21.2	0.521	1
VCX2	13q-Amp	0.521	1
RBPJ	14q-Del	0.521	1
RBBP7	14q-Del	0.521	1
NEXN	13q-Amp	0.521	1
APC	CDK12	0.522	1
WNT1	Amp_8p11.21	0.522	1
CHUK	20p-Del	0.522	1
PRRG1	Del_4p16.1	0.522	1
4q-Del	Amp_12p13.33	0.522	1
Amp_8q24.21	Del_22q13.32	0.522	1
BCOR	GGT1	0.523	1
GGT1	DIP2B	0.523	1
GGT1	LARP4B	0.523	1
GGT1	Del_17q24.3	0.523	1
TPRKB	Del_17q24.3	0.523	1
C14orf184	Del_18q21.2	0.523	1
CDK12	21q-Del	0.523	1
PRPS1	Del_15q11.2	0.523	1
HIST1H1T	Del_17q24.3	0.523	1
STARD3NL	5q-Del	0.524	1
STARD3NL	Amp_2q33.1	0.524	1
STARD3NL	Amp_19q12	0.524	1
ATXN3L	16q-Amp	0.524	1
ATXN3L	Del_5q22.2	0.524	1
ERBB2	MAP4K3	0.524	1
P2RY13	5q-Del	0.524	1
P2RY13	Amp_2q33.1	0.524	1
P2RY13	Amp_19q12	0.524	1
NR1H3	5q-Del	0.524	1
NR1H3	Amp_2q33.1	0.524	1
NR1H3	Amp_19q12	0.524	1
NR1H3	Del_3q26.31	0.524	1
PCBP1	5q-Del	0.524	1
PCBP1	Amp_19q12	0.524	1
PCBP1	Del_3q26.31	0.524	1
RLIM	4q-Del	0.524	1
RLIM	Amp_11p15.5	0.524	1
RLIM	Del_1p13.2	0.524	1
ROS1	8p-Amp	0.524	1
MPHOSPH10	20p-Amp	0.524	1
MPHOSPH10	Amp_11p15.5	0.524	1
VCX2	Amp_5p12	0.524	1
L1TD1	16q-Amp	0.524	1
DCLK2	5q-Del	0.524	1
DCLK2	Del_3q26.31	0.524	1
FYN	5q-Del	0.524	1
FYN	Amp_2q33.1	0.524	1
FYN	Amp_19q12	0.524	1
FYN	Del_3q26.31	0.524	1
GPATCH8	5q-Del	0.524	1
GPATCH8	Amp_2q33.1	0.524	1
NEXN	16q-Amp	0.524	1
NEXN	Del_5q22.2	0.524	1
BIRC3	5q-Del	0.524	1
BIRC3	Amp_19q12	0.524	1
IDH1	Amp_17q24.1	0.524	1
CTNNB1	22q-Del	0.524	1
16q-Amp	Amp_2q33.1	0.524	1
1p-Del	Amp_11p15.5	0.524	1
RNF43	Amp_1q31.1	0.525	1
CDH1	Del_10q21.1	0.525	1
SMAD2	PTEN	0.525	1
RHOA	Amp_6p21.1	0.525	1
FBXW7	IFT57	0.525	1
ERBB2	4p-Del	0.525	1
IQCD	Amp_6p21.1	0.525	1
IQCD	Del_3p26.3	0.525	1
GRB2	Del_15q22.33	0.525	1
IFT57	Del_3p26.3	0.525	1
PTEN	Del_12p13.1	0.525	1
BCORL1	4p-Del	0.525	1
BCORL1	Del_4q22.1	0.525	1
PRPS1	20p-Del	0.525	1
PTGDR	20p-Del	0.525	1
ZNF486	Amp_6p21.1	0.525	1
ZNF486	Del_3p26.3	0.525	1
KDM6A	Amp_16p11.2	0.525	1
13q-Amp	Del_3p14.2	0.525	1
2p-Amp	Del_1p33	0.525	1
2q-Amp	Del_1p33	0.525	1
6p-Amp	Del_1p33	0.525	1
4p-Del	Amp_17q24.1	0.525	1
Amp_16p11.2	Del_16q23.1	0.525	1
CRIPAK	BCL9	0.526	1
CRIPAK	BCORL1	0.526	1
RNF43	OR4D10	0.526	1
FAM123B	CDH1	0.526	1
WNT1	4q-Del	0.526	1
WNT1	Amp_11p15.5	0.526	1
WNT1	Del_1p13.2	0.526	1
SELPLG	Del_21q21.1	0.526	1
ALPK2	4p-Del	0.526	1
ALG12	4q-Del	0.526	1
ALG12	Amp_11p15.5	0.526	1
ALG12	Del_1p13.2	0.526	1
C11orf30	21q-Del	0.526	1
PCBP1	SMAD4	0.526	1
C2orf29	Del_21q21.1	0.526	1
SLC26A8	Del_21q21.1	0.526	1
PTEN	8p-Amp	0.526	1
C14orf184	4q-Del	0.526	1
C14orf184	Amp_11p15.5	0.526	1
C14orf184	Del_1p13.2	0.526	1
20p-Amp	Del_5q12.1	0.526	1
Amp_8q24.21	Del_15q11.2	0.526	1
Del_3p26.3	Del_5q21.2	0.526	1
Del_7q31.1	Del_18q21.2	0.526	1
FAM9A	Amp_16p11.2	0.527	1
GRB2	Amp_16p11.2	0.527	1
RSPH3	Amp_16p11.2	0.527	1
SETD2	8p-Amp	0.527	1
ACVR1B	Del_1p36.11	0.528	1
THOC7	Del_18q21.2	0.528	1
NLRC4	7p-Amp	0.529	1
DIP2B	Amp_5p12	0.529	1
SMAD4	Amp_13q12.2	0.529	1
LARP4B	Amp_5p12	0.529	1
SETD2	Amp_16p11.2	0.529	1
GMPS	Del_3p14.2	0.529	1
PRPS1	Amp_20q12	0.529	1
PTGDR	Amp_20q12	0.529	1
ATM	Del_3p26.3	0.529	1
Amp_10q22.3	Amp_20q12	0.529	1
Del_7q31.1	Del_18p11.31	0.529	1
RLIM	7p-Amp	0.53	1
MPHOSPH10	8q-Amp	0.53	1
7p-Amp	1p-Del	0.53	1
ZFP36L2	Del_21q11.2	0.531	1
B2M	Del_21q11.2	0.531	1
TXNDC2	Amp_20q12	0.531	1
CDH1	Amp_11p15.5	0.531	1
MVK	17q-Amp	0.531	1
ZBTB20	Amp_10q22.3	0.531	1
PRRG1	17q-Amp	0.531	1
MAP4K3	Amp_10q22.3	0.531	1
HIST1H1T	18q-Del	0.531	1
IDH1	Amp_10q22.3	0.531	1
16p-Amp	Del_21q11.2	0.531	1
8p-Amp	Del_2p12	0.531	1
NF2	Amp_5p12	0.532	1
MAPK6	7q-Amp	0.532	1
FAM9A	Amp_20p11.21	0.532	1
NF1	Amp_2q33.1	0.532	1
NF1	Del_3q26.31	0.532	1
PIK3R1	Del_5q12.1	0.532	1
RLIM	Del_4q35.1	0.532	1
C2orf29	7q-Amp	0.532	1
ALDH1A3	7q-Amp	0.532	1
7p-Amp	Amp_10q22.3	0.532	1
Amp_10q22.3	Del_5q21.2	0.532	1
FMN2	Amp_16p11.2	0.533	1
NF2	THOC7	0.533	1
THOC7	Del_4q35.1	0.533	1
RLIM	Amp_13q22.1	0.533	1
TOP2B	9p-Amp	0.533	1
TOP2B	Del_10q21.1	0.533	1
12p-Amp	Del_18q12.2	0.533	1
12q-Amp	Del_6q26	0.533	1
9p-Amp	Del_6q26	0.533	1
9p-Amp	Del_19p13.3	0.533	1
TP53	ROS1	0.534	1
TPRKB	7p-Amp	0.534	1
TPRKB	8q-Amp	0.534	1
NR1H3	Amp_8p11.23	0.534	1
HIST1H1T	7p-Amp	0.534	1
HIST1H1T	8q-Amp	0.534	1
Amp_20q13.12	Del_3q26.31	0.534	1
RNF43	Amp_8p11.21	0.535	1
SOX9	C14orf184	0.535	1
ACVR1B	Del_5q12.1	0.535	1
WNT1	Del_5q23.3	0.535	1
SELPLG	Del_10q23.31	0.535	1
ERBB2	2p-Amp	0.535	1
ERBB2	2q-Amp	0.535	1
ERBB2	6p-Amp	0.535	1
ERBB2	Amp_15q26.1	0.535	1
ALG12	Del_5q23.3	0.535	1
C2orf29	Del_10q23.31	0.535	1
SMAD4	GMNN	0.535	1
C14orf184	Del_5q23.3	0.535	1
ATXN3L	Amp_20p12.1	0.536	1
C14orf184	Del_18q22.1	0.536	1
CDK12	PTGDR	0.536	1
Amp_2q33.1	Del_1p33	0.536	1
Amp_19q12	Del_1p33	0.536	1
Amp_20p12.1	Del_21q21.1	0.536	1
SOX9	RLIM	0.537	1
ZFP36L2	RBPJ	0.537	1
ZFP36L2	HLA-A	0.537	1
ZFP36L2	16p-Amp	0.537	1
B2M	16p-Amp	0.537	1
B2M	Del_8q11.1	0.537	1
MAPK6	Amp_12p13.33	0.537	1
RPTN	16p-Amp	0.537	1
RPTN	Del_8q11.1	0.537	1
PTCH1	Amp_8p11.21	0.537	1
PIK3R1	Del_19p13.3	0.537	1
MPHOSPH10	Del_5q23.3	0.537	1
RBPJ	16p-Amp	0.537	1
RBPJ	Del_8q11.1	0.537	1
RBBP7	16p-Amp	0.537	1
RBBP7	Del_8q11.1	0.537	1
PTEN	Amp_16p11.2	0.537	1
HLA-A	16p-Amp	0.537	1
HLA-A	Del_8q11.1	0.537	1
SETD2	Del_15q21.1	0.537	1
GMPS	16p-Amp	0.537	1
GMPS	Del_8q11.1	0.537	1
16p-Amp	Del_8q11.1	0.537	1
7q-Amp	Del_10q25.2	0.537	1
RNF43	Del_2p12	0.538	1
TXNDC2	VCX2	0.538	1
EGR1	Del_6q26	0.538	1
EGR1	Del_19p13.3	0.538	1
ATXN3L	Del_15q11.2	0.538	1
ST3GAL6	Del_5q22.2	0.538	1
ST3GAL6	Del_6q26	0.538	1
ST3GAL6	Del_19p13.3	0.538	1
PLEKHF2	Del_5q22.2	0.538	1
PLEKHF2	Del_6p25.3	0.538	1
PLEKHF2	Del_6q26	0.538	1
PLAGL2	4p-Del	0.538	1
VCX2	Del_6p25.3	0.538	1
VCX2	Del_6q26	0.538	1
VCX2	Del_19p13.3	0.538	1
BCORL1	Del_21q21.1	0.538	1
8p-Amp	18p-Del	0.538	1
FMN2	12p-Amp	0.539	1
OR4D10	1p-Del	0.539	1
RLIM	Amp_8q24.21	0.539	1
DDX26B	1p-Del	0.539	1
CDK12	Del_3p26.3	0.539	1
IDH1	Del_10q25.2	0.539	1
THOC7	BCL9	0.54	1
THOC7	NLRC4	0.54	1
THOC7	SLC12A6	0.54	1
BCL9	Del_2q22.1	0.54	1
NLRC4	Del_2q22.1	0.54	1
17p-Del	Amp_10q22.3	0.54	1
SMAD2	RHOA	0.541	1
RHOA	Del_12p13.1	0.541	1
ERBB2	17p-Del	0.541	1
IQCD	Del_12p13.1	0.541	1
ASXL1	Del_1p36.11	0.541	1
PTCH1	MAP4K3	0.541	1
PTCH1	IDH1	0.541	1
PTCH1	17q-Amp	0.541	1
PLAGL2	7p-Amp	0.541	1
IFT57	Del_12p13.1	0.541	1
RLIM	Amp_13q12.2	0.541	1
ZNF486	Del_12p13.1	0.541	1
Del_7q31.1	Del_18q22.1	0.541	1
STARD3NL	ALDH1A3	0.542	1
STARD3NL	Del_16p13.3	0.542	1
SELPLG	P2RY13	0.542	1
MAPK6	16q-Amp	0.542	1
ATXN3L	Amp_8p11.21	0.542	1
MGA	16p-Amp	0.542	1
P2RY13	C2orf29	0.542	1
P2RY13	Del_16p13.3	0.542	1
NR1H3	20p-Amp	0.542	1
NR1H3	Del_16p13.3	0.542	1
PCBP1	Del_16p13.3	0.542	1
C2orf29	DCLK2	0.542	1
C2orf29	GPATCH8	0.542	1
C2orf29	16q-Amp	0.542	1
SLC26A8	16q-Amp	0.542	1
DCLK2	Del_16p13.3	0.542	1
FKBP9	16q-Amp	0.542	1
FYN	Del_16p13.3	0.542	1
ALDH1A3	16q-Amp	0.542	1
GPATCH8	Del_16p13.3	0.542	1
BIRC3	Del_16p13.3	0.542	1
ATM	Amp_8p11.21	0.542	1
APC	Del_3p14.2	0.543	1
ACVR1B	SMAD4	0.543	1
FMN2	Amp_8p11.23	0.543	1
PTEN	Amp_10q22.3	0.543	1
FYN	Del_15q21.1	0.543	1
BIRC3	Del_14q11.2	0.543	1
16q-Amp	Del_15q21.1	0.543	1
TP53	ATM	0.544	1
FAM123B	Del_16q23.1	0.544	1
MLH1	Del_16q23.1	0.544	1
SMAD2	Del_4p16.1	0.544	1
NF1	Del_2q22.1	0.544	1
PCBP1	Amp_13q12.13	0.544	1
SMAD4	Del_15q15.2	0.544	1
APC	Amp_16p11.2	0.545	1
THOC7	Del_18q22.1	0.545	1
FBXW7	Amp_2q33.1	0.545	1
BCL9	Del_16q23.1	0.545	1
ERBB2	20p-Del	0.545	1
NLRC4	Del_16q23.1	0.545	1
BMPR2	2p-Amp	0.545	1
BMPR2	2q-Amp	0.545	1
BMPR2	Amp_15q26.1	0.545	1
2p-Amp	Del_10q25.2	0.545	1
6p-Amp	Del_10q25.2	0.545	1
20p-Del	Amp_1q31.1	0.545	1
20p-Del	Amp_17q24.1	0.545	1
Amp_15q26.1	Del_10q25.2	0.545	1
Amp_20p12.1	Del_7q31.1	0.545	1
TXNDC2	7q-Amp	0.546	1
ACVR1B	GGT1	0.546	1
ACVR1B	HIST1H1T	0.546	1
GGT1	KDM6A	0.546	1
GGT1	Del_16q23.1	0.546	1
TPRKB	Del_16q23.1	0.546	1
ALPK2	Del_2p12	0.546	1
ASXL1	Del_2p12	0.546	1
PLAGL2	Amp_17q12	0.546	1
RBPJ	13q-Amp	0.546	1
HIST1H1T	KDM6A	0.546	1
7q-Amp	Del_6q26	0.546	1
SOX9	Amp_12p13.33	0.547	1
PRPS1	9p-Amp	0.547	1
PRPS1	Del_10q21.1	0.547	1
PTGDR	12q-Amp	0.547	1
PTGDR	9p-Amp	0.547	1
9p-Amp	Del_7q31.1	0.547	1
Amp_12p13.33	Del_5q23.3	0.547	1
FAM123B	ATXN3L	0.548	1
FAM123B	Amp_2q33.1	0.548	1
MLH1	Amp_2q33.1	0.548	1
ATXN3L	MVK	0.548	1
MVK	5q-Del	0.548	1
MVK	Amp_2q33.1	0.548	1
MVK	Amp_19q12	0.548	1
MVK	Del_3q26.31	0.548	1
PRRG1	5q-Del	0.548	1
PRRG1	Amp_2q33.1	0.548	1
PRRG1	Amp_19q12	0.548	1
PRRG1	Del_3q26.31	0.548	1
L1TD1	Amp_10q22.3	0.548	1
5q-Del	Amp_10q22.3	0.548	1
Amp_2q33.1	Amp_10q22.3	0.548	1
Amp_10q22.3	Amp_19q12	0.548	1
FMN2	SELPLG	0.549	1
FMN2	ALDH1A3	0.549	1
FMN2	Del_16p13.3	0.549	1
RHOA	Amp_13q22.1	0.549	1
RPTN	17p-Del	0.549	1
PTCH1	Amp_12p13.33	0.549	1
PIK3R1	Del_5q22.2	0.549	1
BIRC3	8p-Amp	0.549	1
CTNNB1	8p-Amp	0.549	1
APC	FBXW7	0.55	1
THOC7	Del_4q22.1	0.55	1
ATXN3L	Amp_17q24.1	0.55	1
ERBB2	L1TD1	0.55	1
ERBB2	5q-Del	0.55	1
ERBB2	Amp_2q33.1	0.55	1
ERBB2	Del_3q26.31	0.55	1
C14orf184	Amp_20q13.12	0.55	1
NEXN	Amp_1q31.1	0.55	1
NEXN	Amp_17q24.1	0.55	1
5q-Del	Amp_1q31.1	0.55	1
5q-Del	Amp_17q24.1	0.55	1
BCOR	Del_6q26	0.551	1
FBXW7	PTGDR	0.551	1
DIP2B	Del_6p25.3	0.551	1
DIP2B	Del_6q26	0.551	1
DIP2B	Del_19p13.3	0.551	1
RBPJ	Del_22q13.32	0.551	1
RBBP7	Del_22q13.32	0.551	1
HLA-A	Del_22q13.32	0.551	1
LARP4B	Del_6q26	0.551	1
BCORL1	15q-Del	0.551	1
PRPS1	Del_15q21.1	0.551	1
GMNN	22q-Del	0.551	1
GMNN	Del_4p16.1	0.551	1
Amp_8p11.21	Del_2q22.1	0.551	1
ARID1A	8p-Amp	0.552	1
WNT1	Del_10q23.31	0.552	1
EGR1	Amp_6p21.1	0.552	1
CHUK	PLEKHF2	0.552	1
CHUK	VCX2	0.552	1
ST3GAL6	Amp_6p21.1	0.552	1
ST3GAL6	Del_3p26.3	0.552	1
PLEKHF2	Amp_6p21.1	0.552	1
PLEKHF2	Del_3p26.3	0.552	1
ALG12	Del_10q23.31	0.552	1
FYN	Del_15q15.2	0.552	1
12p-Amp	Del_10q23.31	0.552	1
16q-Amp	Del_15q15.2	0.552	1
THOC7	Amp_5p12	0.553	1
GRB2	Amp_5p12	0.553	1
PIK3R1	4q-Del	0.553	1
RSPH3	Amp_5p12	0.553	1
PTEN	Amp_12p13.33	0.553	1
ZFP36L2	4q-Del	0.554	1
ZFP36L2	Del_1p13.2	0.554	1
B2M	12p-Amp	0.554	1
TXNDC2	Del_15q22.33	0.554	1
RPTN	12p-Amp	0.554	1
RPTN	4q-Del	0.554	1
RBPJ	Del_1p13.2	0.554	1
RBBP7	12p-Amp	0.554	1
RBBP7	4q-Del	0.554	1
HLA-A	4q-Del	0.554	1
SETD2	Del_2p12	0.554	1
GMPS	12p-Amp	0.554	1
16p-Amp	Del_1p13.2	0.554	1
RHOA	Amp_13q12.2	0.555	1
PRPS1	13q-Amp	0.555	1
13q-Amp	Del_7q31.1	0.555	1
ARID1A	Amp_10q22.3	0.556	1
TP53	CDH1	0.556	1
FAM123B	VCX2	0.556	1
SOX9	SMAD4	0.556	1
RHOA	17q-Amp	0.556	1
CHUK	12q-Amp	0.556	1
CHUK	Del_10q21.1	0.556	1
IQCD	MAP4K3	0.556	1
IQCD	IDH1	0.556	1
PRRG1	Del_15q11.2	0.556	1
IFT57	17q-Amp	0.556	1
ZNF486	17q-Amp	0.556	1
12q-Amp	Del_3p26.3	0.556	1
9p-Amp	Del_3p26.3	0.556	1
GMNN	Del_5q21.2	0.557	1
17p-Del	Amp_2q33.1	0.557	1
ZFP36L2	OR4D10	0.558	1
BCOR	Del_7q31.1	0.558	1
OR4D10	Amp_20p12.1	0.558	1
OR4D10	Del_8q11.1	0.558	1
DIP2B	PRPS1	0.558	1
DDX26B	16p-Amp	0.558	1
DDX26B	Del_8q11.1	0.558	1
SMAD4	Del_10q21.1	0.558	1
PRPS1	Del_15q15.2	0.558	1
PRPS1	Del_17q24.3	0.558	1
PTGDR	Del_17q24.3	0.558	1
8p-Amp	15q-Del	0.558	1
Amp_11p15.5	Amp_13q12.2	0.558	1
CRIPAK	7q-Amp	0.559	1
TPRKB	Amp_16p11.2	0.559	1
GRB2	Del_21q21.1	0.559	1
RSPH3	Del_21q21.1	0.559	1
HIST1H1T	Amp_16p11.2	0.559	1
TP53	BCORL1	0.56	1
BCOR	22q-Del	0.56	1
SELPLG	Del_5q22.2	0.56	1
P2RY13	RLIM	0.56	1
P2RY13	1p-Del	0.56	1
P2RY13	4p-Del	0.56	1
NR1H3	RLIM	0.56	1
NR1H3	MPHOSPH10	0.56	1
NR1H3	1p-Del	0.56	1
DIP2B	Del_4p16.1	0.56	1
PCBP1	1p-Del	0.56	1
RLIM	16q-Amp	0.56	1
MPHOSPH10	16q-Amp	0.56	1
C2orf29	Del_5q22.2	0.56	1
SMAD4	6p-Amp	0.56	1
DCLK2	1p-Del	0.56	1
FYN	1p-Del	0.56	1
ALDH1A3	Del_5q22.2	0.56	1
GPATCH8	1p-Del	0.56	1
GPATCH8	4p-Del	0.56	1
BIRC3	1p-Del	0.56	1
16q-Amp	1p-Del	0.56	1
Amp_16p11.2	Del_5q12.1	0.56	1
TXNDC2	Amp_8p11.21	0.561	1
CDH1	Del_16p13.3	0.561	1
STARD3NL	Del_1p36.11	0.561	1
OR4D10	Del_3p14.2	0.561	1
RPTN	Del_15q22.33	0.561	1
NR1H3	Del_1p36.11	0.561	1
PLAGL2	Del_3p14.2	0.561	1
PCBP1	Del_1p36.11	0.561	1
DDX26B	Del_3p14.2	0.561	1
FYN	Del_1p36.11	0.561	1
SLC12A6	Amp_8p11.23	0.561	1
PTGDR	Amp_20q11.21	0.561	1
17q-Amp	Del_1p36.11	0.561	1
Del_2p12	Del_3p14.2	0.561	1
MLH1	Del_15q11.2	0.562	1
PRRG1	Del_8p22	0.562	1
ZNF486	Del_4p16.1	0.562	1
Amp_19q12	Del_18q12.2	0.562	1
Del_3q26.31	Del_18q12.2	0.562	1
NF2	12q-Amp	0.563	1
ROS1	17q-Amp	0.563	1
MPHOSPH10	Del_10q23.31	0.563	1
SLC26A8	Del_1p33	0.563	1
ALDH1A3	Del_1p33	0.563	1
7p-Amp	Del_1p36.11	0.563	1
9p-Amp	Del_4q35.1	0.563	1
Amp_5p12	Del_15q11.2	0.563	1
NF2	Amp_8p11.23	0.564	1
NLRC4	Amp_16p11.2	0.564	1
PIK3R1	Amp_10q22.3	0.564	1
VCX2	20p-Amp	0.564	1
VCX2	Del_8p23.2	0.564	1
PTEN	Del_6p25.3	0.564	1
BCORL1	Amp_16p11.2	0.564	1
SLC12A6	Amp_16p11.2	0.564	1
SELPLG	MVK	0.565	1
MAPK6	Amp_10q22.3	0.565	1
PRKDC	Amp_6p21.1	0.565	1
NF1	PCBP1	0.565	1
ATXN3L	Amp_13q22.1	0.565	1
MVK	Del_16p13.3	0.565	1
PRRG1	Del_16p13.3	0.565	1
SLC26A8	Amp_10q22.3	0.565	1
L1TD1	Del_10q25.2	0.565	1
TOP2B	8p-Amp	0.565	1
BMPR2	Amp_19q12	0.565	1
ALDH1A3	Amp_10q22.3	0.565	1
CDK12	Amp_1q31.1	0.565	1
PTGDR	Del_1p36.11	0.565	1
6p-Amp	20p-Del	0.565	1
7q-Amp	Del_1p36.11	0.565	1
8p-Amp	Del_6q26	0.565	1
Amp_20q12	Del_12p13.1	0.565	1
ACVR1B	Amp_5p12	0.566	1
BCOR	Del_22q13.32	0.566	1
NF2	Del_19p13.3	0.566	1
RHOA	7q-Amp	0.566	1
IQCD	7q-Amp	0.566	1
ASXL1	Amp_5p12	0.566	1
PTCH1	Del_10q23.31	0.566	1
PIK3R1	Del_3p26.3	0.566	1
IFT57	7q-Amp	0.566	1
APC	8p-Del	0.567	1
SOX9	B2M	0.567	1
SOX9	RBBP7	0.567	1
SOX9	16p-Amp	0.567	1
SOX9	Del_8q11.1	0.567	1
TXNDC2	RSPH3	0.567	1
TXNDC2	Del_2q22.1	0.567	1
SMAD2	VCX2	0.567	1
FAM9A	Del_6p25.3	0.567	1
FAM9A	Del_6q26	0.567	1
FAM9A	Del_19p13.3	0.567	1
EGR1	Del_12p13.1	0.567	1
PRKDC	Amp_12p13.33	0.567	1
THOC7	TOP2B	0.567	1
THOC7	Amp_12p13.33	0.567	1
THOC7	Del_6p25.3	0.567	1
THOC7	Del_6q26	0.567	1
THOC7	Del_19p13.3	0.567	1
ST3GAL6	Del_12p13.1	0.567	1
PLEKHF2	Del_12p13.1	0.567	1
PTCH1	Del_5q21.2	0.567	1
GRB2	15q-Del	0.567	1
GRB2	Del_6p25.3	0.567	1
GRB2	Del_6q26	0.567	1
GRB2	Del_19p13.3	0.567	1
RSPH3	Amp_12p13.33	0.567	1
RSPH3	Del_6q26	0.567	1
RSPH3	Del_19p13.3	0.567	1
TOP2B	Del_2q22.1	0.567	1
CTNNB1	Del_15q11.2	0.567	1
NF1	Del_16q23.1	0.568	1
ALPK2	Amp_8p11.21	0.568	1
KDM6A	Del_5q23.3	0.568	1
Amp_8q24.21	Del_4q22.1	0.568	1
Amp_12p13.33	Amp_20p12.1	0.568	1
CRIPAK	TOP2B	0.569	1
CRIPAK	Del_6p25.3	0.569	1
CRIPAK	Del_6q26	0.569	1
CRIPAK	Del_7q31.1	0.569	1
CRIPAK	Del_19p13.3	0.569	1
FAM123B	Del_10q25.2	0.569	1
MGA	Del_2p12	0.569	1
PLAGL2	Del_5q12.1	0.569	1
HIST1H1T	Del_22q13.32	0.569	1
Amp_20p11.21	Del_1p36.11	0.569	1
TXNDC2	Amp_13q12.13	0.57	1
WNT1	Del_1p33	0.57	1
ALG12	Del_1p33	0.57	1
GGT1	BCL9	0.571	1
GGT1	NLRC4	0.571	1
GGT1	SLC12A6	0.571	1
NF2	16p-Amp	0.571	1
RPTN	Del_4q35.1	0.571	1
ERBB2	8p-Del	0.571	1
ASXL1	Del_4q22.1	0.571	1
SLC12A6	HIST1H1T	0.571	1
16p-Amp	Del_4q35.1	0.571	1
APC	SETD2	0.572	1
ARID1A	Amp_17q24.1	0.572	1
RHOA	L1TD1	0.572	1
RHOA	NEXN	0.572	1
RHOA	5q-Del	0.572	1
RHOA	Amp_2q33.1	0.572	1
RHOA	Amp_19q12	0.572	1
RHOA	Del_3q26.31	0.572	1
P2RY13	Amp_17q12	0.572	1
IQCD	Amp_2q33.1	0.572	1
IQCD	Amp_19q12	0.572	1
ALPK2	16q-Amp	0.572	1
ASXL1	PCBP1	0.572	1
IFT57	21q-Del	0.572	1
IFT57	5q-Del	0.572	1
IFT57	Amp_19q12	0.572	1
RBPJ	Amp_13q12.13	0.572	1
DCLK2	Amp_17q12	0.572	1
ZNF486	Amp_19q12	0.572	1
ZNF486	Del_5q21.2	0.572	1
Amp_17q24.1	Del_15q11.2	0.572	1
BCOR	Del_3p26.3	0.573	1
CHUK	Del_17q24.3	0.573	1
P2RY13	Amp_8p11.21	0.573	1
DIP2B	Amp_6p21.1	0.573	1
DIP2B	Del_3p26.3	0.573	1
DDX26B	Del_21q11.2	0.573	1
DCLK2	Amp_8p11.21	0.573	1
GPATCH8	Amp_8p11.21	0.573	1
CDH1	6p-Amp	0.574	1
CDH1	Amp_15q26.1	0.574	1
MLH1	Amp_16p11.2	0.574	1
PIK3R1	Del_22q13.32	0.574	1
12p-Amp	Del_21q11.2	0.574	1
Amp_20p12.1	Del_5q23.3	0.574	1
BCOR	21q-Del	0.575	1
DIP2B	Del_5q21.2	0.575	1
RLIM	Amp_12p13.33	0.575	1
CDK12	2p-Amp	0.575	1
CDK12	2q-Amp	0.575	1
CDK12	6p-Amp	0.575	1
CDK12	Amp_15q26.1	0.575	1
17q-Amp	22q-Del	0.575	1
APC	CREBBP	0.576	1
EGR1	Amp_8q24.21	0.576	1
TPRKB	Del_15q22.33	0.576	1
ST3GAL6	Amp_8q24.21	0.576	1
PLEKHF2	Amp_8q24.21	0.576	1
HIST1H1T	CREBBP	0.576	1
CTNNB1	Amp_16p11.2	0.576	1
13q-Amp	Amp_10q22.3	0.576	1
9p-Amp	8p-Del	0.576	1
Amp_16p11.2	Del_1p13.2	0.576	1
CRIPAK	17p-Del	0.577	1
SELPLG	Amp_1q31.1	0.577	1
SELPLG	Amp_17q24.1	0.577	1
ATXN3L	20p-Amp	0.577	1
ATXN3L	Del_8p23.2	0.577	1
ERBB2	SLC26A8	0.577	1
PLAGL2	4q-Del	0.577	1
PLAGL2	Amp_11p15.5	0.577	1
PLAGL2	Del_1p13.2	0.577	1
RLIM	7q-Amp	0.577	1
C2orf29	Amp_1q31.1	0.577	1
SLC26A8	Amp_17q24.1	0.577	1
FKBP9	Amp_1q31.1	0.577	1
NEXN	Del_8p23.2	0.577	1
Del_1p13.2	Del_2p12	0.577	1
CRIPAK	Del_10q23.31	0.578	1
CTNNB1	4q-Del	0.578	1
RNF43	Del_6p25.3	0.579	1
ZFP36L2	PCBP1	0.579	1
ZFP36L2	BIRC3	0.579	1
ZFP36L2	16q-Amp	0.579	1
B2M	16q-Amp	0.579	1
CDH1	Del_19p13.3	0.579	1
SMAD2	9p-Amp	0.579	1
WNT1	ERBB2	0.579	1
WNT1	Amp_1q31.1	0.579	1
WNT1	Amp_17q24.1	0.579	1
STARD3NL	16p-Amp	0.579	1
RPTN	PCBP1	0.579	1
RPTN	16q-Amp	0.579	1
FBXW7	Del_3p26.3	0.579	1
ERBB2	ALG12	0.579	1
P2RY13	16p-Amp	0.579	1
P2RY13	Del_8q11.1	0.579	1
NR1H3	GMPS	0.579	1
NR1H3	16p-Amp	0.579	1
NR1H3	Del_8q11.1	0.579	1
ALG12	Amp_17q24.1	0.579	1
GRB2	SMAD4	0.579	1
PCBP1	16p-Amp	0.579	1
PCBP1	Del_8q11.1	0.579	1
ROS1	7q-Amp	0.579	1
RBPJ	16q-Amp	0.579	1
RBBP7	16q-Amp	0.579	1
DCLK2	Del_8q11.1	0.579	1
C14orf184	Amp_1q31.1	0.579	1
C14orf184	Amp_17q24.1	0.579	1
HLA-A	16q-Amp	0.579	1
FYN	16p-Amp	0.579	1
FYN	Del_8q11.1	0.579	1
GPATCH8	16p-Amp	0.579	1
GPATCH8	Del_8q11.1	0.579	1
GMPS	16q-Amp	0.579	1
BIRC3	Del_8q11.1	0.579	1
KDM6A	Amp_8p11.21	0.579	1
12q-Amp	Del_12p13.1	0.579	1
16q-Amp	Del_8q11.1	0.579	1
4p-Del	Del_6p25.3	0.579	1
Amp_1q31.1	Del_3p14.2	0.579	1
Amp_13q22.1	Del_10q23.31	0.579	1
Del_3q26.31	Del_15q21.1	0.579	1
MAP4K3	8q-Amp	0.58	1
HIST1H1T	Amp_13q12.13	0.58	1
IDH1	8q-Amp	0.58	1
TXNDC2	Amp_20q11.21	0.581	1
ACVR1B	PRPS1	0.581	1
ACVR1B	PTGDR	0.581	1
FAM9A	Amp_6p21.1	0.581	1
FAM9A	Del_3p26.3	0.581	1
THOC7	C11orf30	0.581	1
THOC7	Amp_6p21.1	0.581	1
THOC7	Del_3p26.3	0.581	1
CHUK	Del_2q22.1	0.581	1
GRB2	Del_3p26.3	0.581	1
C11orf30	Del_2q22.1	0.581	1
RSPH3	Del_3p26.3	0.581	1
C2orf29	Del_15q11.2	0.581	1
KDM6A	Del_7q31.1	0.581	1
Del_2q22.1	Del_3p26.3	0.581	1
Del_15q11.2	Del_16p13.3	0.581	1
EGR1	17q-Amp	0.582	1
ZBTB20	PLEKHF2	0.582	1
ZBTB20	VCX2	0.582	1
ST3GAL6	17q-Amp	0.582	1
PLEKHF2	MAP4K3	0.582	1
PLEKHF2	IDH1	0.582	1
PLEKHF2	17q-Amp	0.582	1
ROS1	Del_1p33	0.582	1
VCX2	MAP4K3	0.582	1
VCX2	17q-Amp	0.582	1
MLH1	Del_16p13.3	0.583	1
MVK	RLIM	0.583	1
MVK	1p-Del	0.583	1
PRRG1	1p-Del	0.583	1
RLIM	Amp_10q22.3	0.583	1
SETD2	16q-Amp	0.583	1
SETD2	Del_10q25.2	0.583	1
15q-Del	Amp_5p12	0.583	1
1p-Del	Amp_10q22.3	0.583	1
GGT1	NF2	0.584	1
GGT1	Amp_5p12	0.584	1
FAM9A	Del_5q22.2	0.584	1
THOC7	Del_5q22.2	0.584	1
TPRKB	Amp_5p12	0.584	1
TPRKB	Del_4q35.1	0.584	1
PTEN	Del_2q22.1	0.584	1
HIST1H1T	Amp_5p12	0.584	1
HIST1H1T	Del_4q35.1	0.584	1
SOX9	Del_2p12	0.585	1
BCOR	Del_15q11.2	0.585	1
THOC7	RB1	0.585	1
PTCH1	Del_2q22.1	0.585	1
PLAGL2	Del_5q23.3	0.585	1
RB1	Del_2q22.1	0.585	1
2p-Amp	Del_10q21.1	0.585	1
2q-Amp	Del_10q21.1	0.585	1
6p-Amp	Del_10q21.1	0.585	1
Amp_15q26.1	Del_10q21.1	0.585	1
ZFP36L2	8q-Amp	0.586	1
OR4D10	12p-Amp	0.586	1
DDX26B	Amp_11p15.5	0.586	1
PTGDR	20q-Amp	0.586	1
8q-Amp	Del_8q11.1	0.586	1
ARID1A	2p-Amp	0.587	1
ARID1A	2q-Amp	0.587	1
ARID1A	6p-Amp	0.587	1
TXNDC2	Del_16q23.1	0.587	1
ACVR1B	Del_6p25.3	0.587	1
ERBB2	Del_22q13.32	0.587	1
ST3GAL6	Amp_20p12.1	0.587	1
ASXL1	22q-Del	0.587	1
VCX2	Amp_20p12.1	0.587	1
KDM6A	Del_6p25.3	0.587	1
KDM6A	Del_19p13.3	0.587	1
18q-Del	Amp_12p13.33	0.587	1
22q-Del	Amp_17q12	0.587	1
Amp_1q31.1	Del_10q21.1	0.587	1
Amp_17q24.1	Del_10q21.1	0.587	1
Amp_17q24.1	Del_22q13.32	0.587	1
Del_6p25.3	Del_16q23.1	0.587	1
Del_16q23.1	Del_19p13.3	0.587	1
ARID1A	TP53	0.588	1
CRIPAK	22q-Del	0.588	1
CRIPAK	Del_4p16.1	0.588	1
SMAD2	ATM	0.588	1
WNT1	Del_10q25.2	0.588	1
PTCH1	NEXN	0.588	1
PTCH1	Amp_2q33.1	0.588	1
PTCH1	Amp_19q12	0.588	1
PTCH1	Del_3q26.31	0.588	1
C14orf184	Del_10q25.2	0.588	1
ATM	Del_12p13.1	0.588	1
17q-Amp	21q-Del	0.588	1
Amp_17q12	Del_21q21.1	0.588	1
TXNDC2	Del_8p22	0.589	1
RHOA	C2orf29	0.589	1
RHOA	SLC26A8	0.589	1
RHOA	ATM	0.589	1
RHOA	Del_16p13.3	0.589	1
IQCD	Del_16p13.3	0.589	1
IFT57	C2orf29	0.589	1
IFT57	ALDH1A3	0.589	1
PTEN	7q-Amp	0.589	1
ZNF486	Del_16p13.3	0.589	1
TXNDC2	Del_4q22.1	0.59	1
CDH1	ZNF486	0.59	1
MLH1	12p-Amp	0.59	1
MLH1	Amp_11p15.5	0.59	1
PRRG1	Del_15q21.1	0.59	1
Amp_10q22.3	Del_14q11.2	0.59	1
Del_3q26.31	Del_15q15.2	0.59	1
CRIPAK	C11orf30	0.591	1
CRIPAK	Amp_6p21.1	0.591	1
CRIPAK	Del_3p26.3	0.591	1
RLIM	Del_1p33	0.591	1
C2orf29	Amp_8p11.21	0.591	1
C14orf184	Amp_20q12	0.591	1
C14orf184	Del_18q12.2	0.591	1
ALDH1A3	Amp_8p11.21	0.591	1
CDK12	15q-Del	0.591	1
CDK12	Amp_12p13.33	0.591	1
GMNN	Amp_20p12.1	0.591	1
12q-Amp	Del_4q22.1	0.591	1
Amp_8p11.21	Del_16p13.3	0.591	1
ZFP36L2	Del_4q22.1	0.592	1
SELPLG	13q-Amp	0.592	1
SELPLG	Del_10q25.2	0.592	1
RPTN	Del_4q22.1	0.592	1
C2orf29	Del_10q25.2	0.592	1
SLC26A8	Del_10q25.2	0.592	1
BMPR2	Del_16p13.3	0.592	1
PRPS1	20p-Amp	0.592	1
PTGDR	20p-Amp	0.592	1
20p-Amp	Del_7q31.1	0.592	1
15q-Del	Amp_8p11.21	0.592	1
Amp_16p11.2	Del_5q23.3	0.592	1
Amp_20p12.1	Del_16p13.3	0.592	1
Amp_20p11.21	Del_1p13.2	0.592	1
Del_7q31.1	Del_8p23.2	0.592	1
NF1	Amp_8p11.23	0.593	1
CHUK	8p-Amp	0.593	1
HLA-A	Del_10q23.31	0.593	1
PRPS1	Amp_16p11.2	0.593	1
PTGDR	Amp_16p11.2	0.593	1
Amp_16p11.2	Del_7q31.1	0.593	1
Amp_17q12	Del_6p25.3	0.593	1
EGR1	FBXW7	0.594	1
PTEN	7p-Amp	0.594	1
18p-Del	Amp_15q26.1	0.594	1
SMAD2	THOC7	0.595	1
SMAD2	RSPH3	0.595	1
SMAD2	Del_2q22.1	0.595	1
STARD3NL	Del_3p14.2	0.595	1
FAM9A	Del_12p13.1	0.595	1
THOC7	Del_12p13.1	0.595	1
GRB2	Del_12p13.1	0.595	1
PCBP1	Del_3p14.2	0.595	1
ROS1	Amp_19q12	0.595	1
ROS1	Del_3q26.31	0.595	1
FYN	Del_3p14.2	0.595	1
BIRC3	Del_3p14.2	0.595	1
ZNF486	8q-Amp	0.595	1
20p-Del	4p-Del	0.595	1
Del_2q22.1	Del_12p13.1	0.595	1
RNF43	Amp_10q22.3	0.596	1
BCOR	2p-Amp	0.596	1
BCOR	2q-Amp	0.596	1
BCOR	6p-Amp	0.596	1
BCOR	Amp_15q26.1	0.596	1
SMAD2	PIK3R1	0.596	1
NF1	Amp_1q31.1	0.596	1
FBXW7	GMNN	0.596	1
ATXN3L	20p-Del	0.596	1
ALG12	CTNNB1	0.596	1
DIP2B	2p-Amp	0.596	1
DIP2B	2q-Amp	0.596	1
DIP2B	Amp_15q26.1	0.596	1
PRRG1	4p-Del	0.596	1
PIK3R1	Del_12p13.1	0.596	1
L1TD1	20p-Del	0.596	1
LARP4B	2p-Amp	0.596	1
LARP4B	2q-Amp	0.596	1
LARP4B	6p-Amp	0.596	1
LARP4B	Amp_15q26.1	0.596	1
LARP4B	Del_12p13.1	0.596	1
2p-Amp	Del_17q24.3	0.596	1
2q-Amp	Del_17q24.3	0.596	1
7q-Amp	Del_4q22.1	0.596	1
18p-Del	Del_3q26.31	0.596	1
20p-Del	Del_3q26.31	0.596	1
Amp_15q26.1	Del_17q24.3	0.596	1
ZFP36L2	20p-Amp	0.597	1
GGT1	TOP2B	0.597	1
GGT1	Del_6p25.3	0.597	1
GGT1	Del_6q26	0.597	1
GGT1	Del_19p13.3	0.597	1
SELPLG	Amp_13q12.13	0.597	1
MGA	ERBB2	0.597	1
MGA	Amp_1q31.1	0.597	1
TPRKB	Del_6q26	0.597	1
TPRKB	Del_19p13.3	0.597	1
HIST1H1T	Del_6q26	0.597	1
HIST1H1T	Del_19p13.3	0.597	1
GMNN	4p-Del	0.597	1
Amp_1q31.1	Del_5q12.1	0.597	1
Amp_8q24.21	Amp_11p15.5	0.597	1
STARD3NL	OR4D10	0.598	1
EGR1	ATXN3L	0.598	1
EGR1	NEXN	0.598	1
EGR1	5q-Del	0.598	1
EGR1	Amp_2q33.1	0.598	1
EGR1	Amp_19q12	0.598	1
EGR1	Del_3q26.31	0.598	1
ATXN3L	VCX2	0.598	1
ST3GAL6	5q-Del	0.598	1
ST3GAL6	Amp_2q33.1	0.598	1
ST3GAL6	Amp_19q12	0.598	1
ST3GAL6	Del_3q26.31	0.598	1
PLEKHF2	5q-Del	0.598	1
PLEKHF2	Amp_2q33.1	0.598	1
PLEKHF2	Amp_19q12	0.598	1
PLEKHF2	Del_3q26.31	0.598	1
PCBP1	DDX26B	0.598	1
VCX2	L1TD1	0.598	1
VCX2	NEXN	0.598	1
VCX2	Del_3q26.31	0.598	1
DDX26B	DCLK2	0.598	1
DDX26B	16q-Amp	0.598	1
Amp_12p13.33	Del_10q23.31	0.598	1
PRRG1	Del_15q15.2	0.599	1
ROS1	Del_5q21.2	0.599	1
SMAD4	15q-Del	0.6	1
HIST1H1T	Del_4q22.1	0.6	1
Amp_19q12	Del_1p36.11	0.6	1
Del_1p36.11	Del_3q26.31	0.6	1
B2M	Amp_10q22.3	0.601	1
TXNDC2	Del_15q11.2	0.601	1
RPTN	Amp_10q22.3	0.601	1
FBXW7	Del_16p13.3	0.601	1
MVK	16p-Amp	0.601	1
BCL9	12p-Amp	0.601	1
NLRC4	Amp_11p15.5	0.601	1
PLAGL2	Del_10q23.31	0.601	1
PRRG1	16p-Amp	0.601	1
RBPJ	Amp_10q22.3	0.601	1
HLA-A	Amp_10q22.3	0.601	1
BCORL1	4q-Del	0.601	1
SLC12A6	4q-Del	0.601	1
GMPS	Amp_10q22.3	0.601	1
PRPS1	14q-Del	0.601	1
9p-Amp	Del_15q21.1	0.601	1
Del_6p25.3	Del_15q11.2	0.601	1
CRIPAK	21q-Del	0.602	1
FAM123B	THOC7	0.602	1
B2M	Del_21q21.1	0.602	1
TXNDC2	Del_21q21.1	0.602	1
TOP2B	Del_21q21.1	0.602	1
Del_7q31.1	Del_18q12.2	0.602	1
CDH1	Del_4q35.1	0.603	1
ZBTB20	12q-Amp	0.603	1
ZBTB20	9p-Amp	0.603	1
PLEKHF2	22q-Del	0.603	1
VCX2	22q-Del	0.603	1
SMAD4	Amp_8p11.21	0.603	1
PTGDR	Amp_8q24.21	0.603	1
IDH1	9p-Amp	0.603	1
17q-Amp	9p-Amp	0.603	1
17q-Amp	Del_10q21.1	0.603	1
Amp_20q12	Del_3q26.31	0.603	1
NF2	Amp_8p11.21	0.604	1
PTCH1	Del_5q22.2	0.604	1
NLRC4	Amp_5p12	0.604	1
NLRC4	Del_7q31.1	0.604	1
SMAD4	8p-Del	0.604	1
BCORL1	Amp_5p12	0.604	1
BCORL1	Del_7q31.1	0.604	1
SLC12A6	Amp_5p12	0.604	1
SLC12A6	Del_7q31.1	0.604	1
GMNN	Amp_17q12	0.604	1
13q-Amp	Del_2p12	0.604	1
Amp_8p11.21	Del_4q35.1	0.604	1
Amp_20q11.21	Del_3p14.2	0.604	1
ERBB2	MPHOSPH10	0.605	1
RLIM	Amp_1q31.1	0.605	1
TOP2B	Amp_16p11.2	0.605	1
BMPR2	12q-Amp	0.605	1
12q-Amp	Del_21q21.1	0.605	1
9p-Amp	Del_10q25.2	0.605	1
1p-Del	Amp_1q31.1	0.605	1
4q-Del	Amp_8p11.23	0.605	1
Amp_16p11.2	Del_6q26	0.605	1
CRIPAK	2p-Amp	0.606	1
CRIPAK	2q-Amp	0.606	1
CRIPAK	6p-Amp	0.606	1
CRIPAK	Amp_15q26.1	0.606	1
RHOA	RLIM	0.606	1
RHOA	1p-Del	0.606	1
MGA	PCBP1	0.606	1
IQCD	MPHOSPH10	0.606	1
IQCD	1p-Del	0.606	1
ALPK2	21q-Del	0.606	1
ASXL1	15q-Del	0.606	1
PCBP1	Del_5q12.1	0.606	1
IFT57	RLIM	0.606	1
IFT57	1p-Del	0.606	1
BIRC3	Del_5q12.1	0.606	1
ZNF486	1p-Del	0.606	1
16q-Amp	Del_5q12.1	0.606	1
15q-Del	Amp_17q12	0.606	1
WNT1	20p-Del	0.607	1
CHUK	4p-Del	0.607	1
ATXN3L	Del_4p16.1	0.607	1
ERBB2	7p-Amp	0.607	1
ASXL1	PRRG1	0.607	1
ASXL1	Amp_10q22.3	0.607	1
ALG12	20p-Del	0.607	1
PRRG1	Amp_17q12	0.607	1
ROS1	Del_5q22.2	0.607	1
SETD2	Del_3p14.2	0.607	1
ATM	Del_5q22.2	0.607	1
Amp_17q12	Del_15q11.2	0.607	1
Amp_19q12	Del_4p16.1	0.607	1
CHUK	Del_16q23.1	0.608	1
ERBB2	Del_17q24.3	0.608	1
DIP2B	Amp_17q24.1	0.608	1
LARP4B	Amp_1q31.1	0.608	1
SETD2	Del_6p25.3	0.608	1
PRPS1	Del_21q11.2	0.608	1
Amp_1q31.1	Amp_8p11.21	0.608	1
Amp_17q24.1	Del_17q24.3	0.608	1
OR4D10	Del_8p22	0.609	1
FAM9A	17q-Amp	0.609	1
THOC7	17q-Amp	0.609	1
FBXW7	BCL9	0.609	1
ZBTB20	Del_2q22.1	0.609	1
GRB2	IDH1	0.609	1
GRB2	17q-Amp	0.609	1
RSPH3	IDH1	0.609	1
PTGDR	8q-Amp	0.609	1
IDH1	Del_2q22.1	0.609	1
Amp_5p12	Del_14q11.2	0.609	1
CRIPAK	Del_15q22.33	0.61	1
RNF43	12p-Amp	0.61	1
GGT1	CHUK	0.61	1
GGT1	C11orf30	0.61	1
GGT1	Amp_6p21.1	0.61	1
SELPLG	Amp_8p11.23	0.61	1
MAPK6	Amp_8p11.23	0.61	1
CHUK	TPRKB	0.61	1
CHUK	HIST1H1T	0.61	1
TPRKB	Del_3p26.3	0.61	1
C11orf30	HIST1H1T	0.61	1
PCBP1	Amp_20p11.21	0.61	1
C2orf29	Amp_8p11.23	0.61	1
DCLK2	Amp_20p11.21	0.61	1
HIST1H1T	Amp_6p21.1	0.61	1
HIST1H1T	Del_3p26.3	0.61	1
12p-Amp	4p-Del	0.61	1
APC	B2M	0.611	1
APC	RPTN	0.611	1
APC	16p-Amp	0.611	1
SELPLG	20q-Amp	0.611	1
NF1	HIST1H1T	0.611	1
MGA	Amp_5p12	0.611	1
CDK12	NEXN	0.611	1
APC	C11orf30	0.612	1
ZFP36L2	Amp_12p13.33	0.612	1
B2M	Amp_12p13.33	0.612	1
RPTN	15q-Del	0.612	1
THOC7	13q-Amp	0.612	1
MGA	Del_4q35.1	0.612	1
ALPK2	20p-Del	0.612	1
RBPJ	Amp_12p13.33	0.612	1
RB1	BIRC3	0.612	1
RB1	Del_6p25.3	0.612	1
HLA-A	Amp_12p13.33	0.612	1
20p-Del	Amp_17q12	0.612	1
APC	FAM9A	0.613	1
APC	Del_2q22.1	0.613	1
EGR1	Del_5q21.2	0.613	1
NF1	7p-Amp	0.613	1
ERBB2	Amp_8p11.23	0.613	1
ST3GAL6	Del_5q21.2	0.613	1
VCX2	21q-Del	0.613	1
Amp_1q31.1	Amp_8p11.23	0.613	1
Amp_15q26.1	Del_14q11.2	0.613	1
Amp_15q26.1	Del_15q21.1	0.613	1
Amp_20q11.21	Del_12p13.1	0.613	1
SELPLG	EGR1	0.614	1
SELPLG	VCX2	0.614	1
MAPK6	VCX2	0.614	1
EGR1	C2orf29	0.614	1
EGR1	Del_16p13.3	0.614	1
ST3GAL6	C2orf29	0.614	1
ST3GAL6	Del_16p13.3	0.614	1
PLEKHF2	Del_16p13.3	0.614	1
VCX2	SLC26A8	0.614	1
VCX2	ALDH1A3	0.614	1
VCX2	Del_16p13.3	0.614	1
HIST1H1T	17p-Del	0.614	1
9p-Amp	Del_15q15.2	0.614	1
APC	CRIPAK	0.615	1
TP53	Amp_16p11.2	0.615	1
TXNDC2	15q-Del	0.615	1
PRKDC	PRPS1	0.615	1
PRKDC	Del_7q31.1	0.615	1
TOP2B	Amp_12p13.33	0.615	1
SOX9	PRKDC	0.616	1
TPRKB	15q-Del	0.616	1
TPRKB	Amp_12p13.33	0.616	1
BCL9	Del_5q23.3	0.616	1
C14orf184	CDK12	0.616	1
FYN	Del_21q11.2	0.616	1
BCORL1	Del_5q23.3	0.616	1
BIRC3	Del_21q11.2	0.616	1
KDM6A	8q-Amp	0.616	1
16q-Amp	Del_21q11.2	0.616	1
ACVR1B	6p-Amp	0.617	1
ACVR1B	Amp_15q26.1	0.617	1
NF2	Amp_17q24.1	0.617	1
ERBB2	Del_4q35.1	0.617	1
SMAD4	Del_15q21.1	0.617	1
PTGDR	Amp_5p12	0.617	1
HIST1H1T	Amp_8p11.21	0.617	1
HIST1H1T	Amp_13q12.2	0.617	1
KDM6A	2p-Amp	0.617	1
KDM6A	2q-Amp	0.617	1
KDM6A	6p-Amp	0.617	1
KDM6A	Amp_15q26.1	0.617	1
2p-Amp	Del_16q23.1	0.617	1
2q-Amp	Del_16q23.1	0.617	1
6p-Amp	Del_16q23.1	0.617	1
Amp_5p12	Del_7q31.1	0.617	1
Amp_15q26.1	Del_16q23.1	0.617	1
Amp_17q24.1	Del_4q35.1	0.617	1
FAM123B	1p-Del	0.618	1
STARD3NL	16q-Amp	0.618	1
STARD3NL	Del_1p13.2	0.618	1
P2RY13	NR1H3	0.618	1
P2RY13	PCBP1	0.618	1
P2RY13	12p-Amp	0.618	1
P2RY13	16q-Amp	0.618	1
P2RY13	4q-Del	0.618	1
P2RY13	Amp_11p15.5	0.618	1
NR1H3	PCBP1	0.618	1
NR1H3	DCLK2	0.618	1
NR1H3	FYN	0.618	1
NR1H3	GPATCH8	0.618	1
NR1H3	BIRC3	0.618	1
NR1H3	12p-Amp	0.618	1
NR1H3	16q-Amp	0.618	1
PLAGL2	Del_1p33	0.618	1
PCBP1	GPATCH8	0.618	1
PCBP1	12p-Amp	0.618	1
PCBP1	16q-Amp	0.618	1
PCBP1	4q-Del	0.618	1
PCBP1	Amp_11p15.5	0.618	1
DCLK2	4q-Del	0.618	1
DCLK2	Amp_11p15.5	0.618	1
DCLK2	Del_1p13.2	0.618	1
C14orf184	Amp_20q11.21	0.618	1
FYN	12p-Amp	0.618	1
FYN	16q-Amp	0.618	1
FYN	Amp_11p15.5	0.618	1
FYN	Del_1p13.2	0.618	1
GPATCH8	BIRC3	0.618	1
GPATCH8	12p-Amp	0.618	1
GPATCH8	16q-Amp	0.618	1
GPATCH8	4q-Del	0.618	1
BIRC3	12p-Amp	0.618	1
BIRC3	Del_1p13.2	0.618	1
GMNN	Del_3p14.2	0.618	1
Del_1p33	Del_2p12	0.618	1
CRIPAK	Del_15q11.2	0.619	1
ZFP36L2	Del_1p33	0.619	1
BCOR	17q-Amp	0.619	1
OR4D10	Amp_10q22.3	0.619	1
ATXN3L	Del_5q21.2	0.619	1
DIP2B	17q-Amp	0.619	1
DDX26B	Amp_10q22.3	0.619	1
RBPJ	Del_1p33	0.619	1
L1TD1	21q-Del	0.619	1
BMPR2	1p-Del	0.619	1
NEXN	Del_5q21.2	0.619	1
GMPS	Del_1p33	0.619	1
IDH1	CTNNB1	0.619	1
CTNNB1	17q-Amp	0.619	1
21q-Del	Amp_19q12	0.619	1
Amp_15q26.1	Del_15q15.2	0.619	1
Del_3q26.31	Del_5q21.2	0.619	1
FMN2	Amp_8p11.21	0.62	1
SELPLG	Del_15q21.1	0.62	1
C2orf29	Del_15q21.1	0.62	1
SELPLG	20p-Del	0.621	1
EGR1	7q-Amp	0.621	1
NF1	Amp_10q22.3	0.621	1
NF1	Del_10q21.1	0.621	1
PRRG1	Del_8p23.2	0.621	1
FYN	Amp_20p12.1	0.621	1
ALDH1A3	20p-Del	0.621	1
20p-Amp	Amp_10q22.3	0.621	1
SMAD2	Amp_20p12.1	0.622	1
RHOA	8p-Amp	0.622	1
IQCD	8p-Amp	0.622	1
IFT57	8p-Amp	0.622	1
SMAD4	L1TD1	0.622	1
SMAD4	5q-Del	0.622	1
SMAD4	Amp_19q12	0.622	1
LARP4B	Amp_8p11.23	0.622	1
Amp_8p11.23	Del_17q24.3	0.622	1
Amp_20p12.1	Del_12p13.1	0.622	1
Amp_20p11.21	Del_10q23.31	0.622	1
APC	SOX9	0.623	1
B2M	IQCD	0.623	1
B2M	IFT57	0.623	1
TXNDC2	Amp_20q13.12	0.623	1
FMN2	RBPJ	0.623	1
RHOA	RPTN	0.623	1
RHOA	RBBP7	0.623	1
RHOA	HLA-A	0.623	1
RHOA	GMPS	0.623	1
RHOA	16p-Amp	0.623	1
RHOA	Del_8q11.1	0.623	1
RPTN	ZNF486	0.623	1
CHUK	Del_4q22.1	0.623	1
ERBB2	22q-Del	0.623	1
ERBB2	Del_4p16.1	0.623	1
IQCD	GMPS	0.623	1
IQCD	16p-Amp	0.623	1
IQCD	Del_8q11.1	0.623	1
IFT57	RBPJ	0.623	1
IFT57	16p-Amp	0.623	1
IFT57	Del_8q11.1	0.623	1
DDX26B	Del_10q23.31	0.623	1
PTGDR	Del_22q13.32	0.623	1
ZNF486	Del_8q11.1	0.623	1
CREBBP	Del_12p13.1	0.623	1
7q-Amp	Del_8q11.1	0.623	1
8q-Amp	Del_6q26	0.623	1
22q-Del	Amp_1q31.1	0.623	1
22q-Del	Amp_17q24.1	0.623	1
Del_7q31.1	Del_22q13.32	0.623	1
Del_12p13.1	Del_15q22.33	0.623	1
TXNDC2	BCL9	0.624	1
SMAD2	GGT1	0.624	1
SMAD2	TPRKB	0.624	1
FMN2	GGT1	0.624	1
GGT1	Del_12p13.1	0.624	1
FAM9A	ATXN3L	0.624	1
FAM9A	5q-Del	0.624	1
FAM9A	Amp_19q12	0.624	1
FAM9A	Del_3q26.31	0.624	1
THOC7	NEXN	0.624	1
THOC7	5q-Del	0.624	1
THOC7	Amp_2q33.1	0.624	1
THOC7	Amp_19q12	0.624	1
ATXN3L	RSPH3	0.624	1
TPRKB	Del_12p13.1	0.624	1
BCL9	Del_19p13.3	0.624	1
GRB2	5q-Del	0.624	1
GRB2	Amp_2q33.1	0.624	1
RSPH3	5q-Del	0.624	1
RSPH3	Amp_19q12	0.624	1
SLC12A6	Del_6q26	0.624	1
SLC12A6	Del_19p13.3	0.624	1
NEXN	Del_2q22.1	0.624	1
HIST1H1T	Del_12p13.1	0.624	1
CREBBP	Del_22q13.32	0.624	1
Amp_16p11.2	Del_10q23.31	0.624	1
WNT1	7q-Amp	0.625	1
ALG12	7q-Amp	0.625	1
GMNN	Del_5q12.1	0.625	1
17q-Amp	Del_21q11.2	0.625	1
17p-Del	Amp_5p12	0.625	1
RNF43	Amp_8p11.23	0.626	1
WNT1	Del_10q21.1	0.626	1
ERBB2	PLAGL2	0.626	1
ERBB2	Del_2p12	0.626	1
ALG12	9p-Amp	0.626	1
ALG12	Del_10q21.1	0.626	1
PLAGL2	Amp_1q31.1	0.626	1
PLAGL2	Amp_17q24.1	0.626	1
DIP2B	Del_10q25.2	0.626	1
C14orf184	12q-Amp	0.626	1
C14orf184	Del_10q21.1	0.626	1
LARP4B	Del_10q25.2	0.626	1
2p-Amp	Del_1p36.11	0.626	1
2q-Amp	Del_1p36.11	0.626	1
6p-Amp	Del_1p36.11	0.626	1
Amp_5p12	Amp_11p15.5	0.626	1
Amp_5p12	Del_1p13.2	0.626	1
Amp_15q26.1	Del_1p36.11	0.626	1
SMAD2	7q-Amp	0.627	1
FMN2	Del_19p13.3	0.627	1
ATXN3L	12q-Amp	0.627	1
ATXN3L	9p-Amp	0.627	1
NEXN	12q-Amp	0.627	1
NEXN	9p-Amp	0.627	1
12q-Amp	5q-Del	0.627	1
8p-Amp	Del_10q21.1	0.627	1
9p-Amp	5q-Del	0.627	1
9p-Amp	Amp_2q33.1	0.627	1
9p-Amp	Amp_19q12	0.627	1
Amp_19q12	Del_10q21.1	0.627	1
Amp_19q12	Del_18q21.2	0.627	1
TXNDC2	Amp_13q12.2	0.628	1
FBXW7	PCBP1	0.628	1
FBXW7	16q-Amp	0.628	1
ASXL1	4q-Del	0.628	1
2p-Amp	Amp_16p11.2	0.628	1
2q-Amp	Amp_16p11.2	0.628	1
4q-Del	Amp_17q12	0.628	1
Amp_15q26.1	Amp_16p11.2	0.628	1
CRIPAK	ERBB2	0.629	1
ACVR1B	21q-Del	0.629	1
IQCD	PTEN	0.629	1
PRRG1	Amp_8p11.21	0.629	1
PRRG1	Del_3p14.2	0.629	1
PRPS1	Del_6q26	0.629	1
PRPS1	Del_19p13.3	0.629	1
PTGDR	Del_6p25.3	0.629	1
PTGDR	Del_6q26	0.629	1
PTGDR	Del_19p13.3	0.629	1
Amp_6p21.1	Del_18p11.31	0.629	1
Amp_10q22.3	Del_3p14.2	0.629	1
Del_5q21.2	Del_16q23.1	0.629	1
Del_7q31.1	Del_19p13.3	0.629	1
SOX9	STARD3NL	0.63	1
SOX9	NR1H3	0.63	1
SOX9	GPATCH8	0.63	1
SOX9	BIRC3	0.63	1
SOX9	16q-Amp	0.63	1
ACVR1B	SMAD2	0.63	1
CDH1	Del_16q23.1	0.63	1
MLH1	8p-Amp	0.63	1
SMAD2	Del_16q23.1	0.63	1
EGR1	RLIM	0.63	1
EGR1	1p-Del	0.63	1
P2RY13	Del_5q23.3	0.63	1
ST3GAL6	1p-Del	0.63	1
PLEKHF2	MPHOSPH10	0.63	1
PLEKHF2	1p-Del	0.63	1
MPHOSPH10	VCX2	0.63	1
C2orf29	Del_15q15.2	0.63	1
PRPS1	CREBBP	0.63	1
PRPS1	Del_15q22.33	0.63	1
PTGDR	Del_15q22.33	0.63	1
CREBBP	Del_7q31.1	0.63	1
KDM6A	Del_12p13.1	0.63	1
16q-Amp	Del_5q23.3	0.63	1
APC	21q-Del	0.631	1
RHOA	Amp_8p11.23	0.631	1
IQCD	Amp_8p11.23	0.631	1
C14orf184	18q-Del	0.631	1
9p-Amp	17p-Del	0.631	1
GGT1	Del_5q22.2	0.632	1
HIST1H1T	Del_5q22.2	0.632	1
7q-Amp	21q-Del	0.632	1
SOX9	ERBB2	0.633	1
ZFP36L2	ERBB2	0.633	1
ZFP36L2	Amp_1q31.1	0.633	1
B2M	ERBB2	0.633	1
B2M	Amp_17q24.1	0.633	1
MLH1	Del_15q21.1	0.633	1
FMN2	12q-Amp	0.633	1
GGT1	Amp_20p11.21	0.633	1
RPTN	Amp_17q24.1	0.633	1
ERBB2	Del_8q11.1	0.633	1
IQCD	4p-Del	0.633	1
RBPJ	Amp_1q31.1	0.633	1
RBPJ	Amp_17q24.1	0.633	1
RBBP7	Amp_1q31.1	0.633	1
RBBP7	Amp_17q24.1	0.633	1
RB1	Del_16q23.1	0.633	1
GMNN	12p-Amp	0.633	1
GMNN	4q-Del	0.633	1
GMNN	Amp_11p15.5	0.633	1
GMNN	Del_1p13.2	0.633	1
16p-Amp	Del_5q22.2	0.633	1
9p-Amp	Del_8p22	0.633	1
Del_5q22.2	Del_8q11.1	0.633	1
BCOR	Del_15q21.1	0.634	1
ATXN3L	8p-Del	0.634	1
NR1H3	Del_22q13.32	0.634	1
NEXN	8p-Del	0.634	1
BIRC3	Del_22q13.32	0.634	1
16q-Amp	Del_22q13.32	0.634	1
8p-Del	Amp_2q33.1	0.634	1
Amp_8p11.23	Del_6p25.3	0.634	1
Amp_8p11.23	Del_6q26	0.634	1
CRIPAK	ZBTB20	0.635	1
RNF43	SMAD2	0.635	1
FBXW7	6p-Amp	0.635	1
PLAGL2	Del_10q25.2	0.635	1
BMPR2	Del_2p12	0.635	1
SETD2	Amp_6p21.1	0.635	1
CTNNB1	Del_4q22.1	0.635	1
Amp_20p12.1	Del_5q12.1	0.635	1
FAM123B	Del_21q11.2	0.636	1
BCOR	C14orf184	0.636	1
WNT1	DIP2B	0.636	1
WNT1	Del_17q24.3	0.636	1
PRKDC	17q-Amp	0.636	1
ALG12	Del_17q24.3	0.636	1
C14orf184	Del_17q24.3	0.636	1
CDK12	Del_16p13.3	0.636	1
NF2	4q-Del	0.637	1
THOC7	ROS1	0.637	1
PTEN	2p-Amp	0.637	1
PTEN	6p-Amp	0.637	1
PTGDR	Del_4q35.1	0.637	1
Amp_15q26.1	Del_18p11.31	0.637	1
GGT1	MAP4K3	0.638	1
STARD3NL	PRRG1	0.638	1
TPRKB	IDH1	0.638	1
TPRKB	17q-Amp	0.638	1
MVK	PCBP1	0.638	1
MVK	DCLK2	0.638	1
MVK	16q-Amp	0.638	1
P2RY13	Amp_10q22.3	0.638	1
NR1H3	Amp_10q22.3	0.638	1
PRRG1	16q-Amp	0.638	1
PCBP1	Amp_10q22.3	0.638	1
DCLK2	Amp_10q22.3	0.638	1
FYN	Amp_10q22.3	0.638	1
GPATCH8	Amp_10q22.3	0.638	1
BIRC3	Amp_10q22.3	0.638	1
HIST1H1T	17q-Amp	0.638	1
16q-Amp	Amp_10q22.3	0.638	1
21q-Del	Amp_13q12.13	0.638	1
Amp_17q12	Del_21q11.2	0.638	1
SELPLG	FAM9A	0.639	1
SELPLG	RSPH3	0.639	1
SELPLG	Del_2q22.1	0.639	1
MAPK6	THOC7	0.639	1
MAPK6	Del_2q22.1	0.639	1
RHOA	Del_15q21.1	0.639	1
FAM9A	C2orf29	0.639	1
FAM9A	Del_16p13.3	0.639	1
THOC7	C2orf29	0.639	1
THOC7	SLC26A8	0.639	1
THOC7	Del_16p13.3	0.639	1
GRB2	C2orf29	0.639	1
GRB2	Del_16p13.3	0.639	1
RSPH3	Del_16p13.3	0.639	1
SLC26A8	Del_2q22.1	0.639	1
ALDH1A3	Del_2q22.1	0.639	1
ZNF486	Del_14q11.2	0.639	1
CREBBP	8p-Amp	0.639	1
GMNN	7p-Amp	0.639	1
GMNN	8q-Amp	0.639	1
GMNN	Amp_20q13.12	0.639	1
Amp_6p21.1	Del_15q11.2	0.639	1
Del_5q22.2	Del_6p25.3	0.639	1
SOX9	GMNN	0.64	1
MLH1	15q-Del	0.64	1
SELPLG	22q-Del	0.64	1
SELPLG	Del_4p16.1	0.64	1
MGA	Amp_10q22.3	0.64	1
BCL9	2p-Amp	0.64	1
BCL9	2q-Amp	0.64	1
BCL9	6p-Amp	0.64	1
BCL9	Amp_15q26.1	0.64	1
NLRC4	2q-Amp	0.64	1
NLRC4	Amp_15q26.1	0.64	1
MPHOSPH10	Amp_8p11.21	0.64	1
BCORL1	2q-Amp	0.64	1
SLC12A6	2p-Amp	0.64	1
SLC12A6	2q-Amp	0.64	1
SLC12A6	6p-Amp	0.64	1
SLC12A6	Amp_15q26.1	0.64	1
GMNN	Del_5q23.3	0.64	1
Amp_17q12	Del_5q22.2	0.64	1
OR4D10	RHOA	0.641	1
RPTN	18p-Del	0.641	1
RPTN	Amp_20p11.21	0.641	1
THOC7	CTNNB1	0.641	1
IQCD	DDX26B	0.641	1
PIK3R1	VCX2	0.641	1
RSPH3	CTNNB1	0.641	1
DDX26B	Del_21q21.1	0.641	1
CHUK	Del_7q31.1	0.642	1
ATXN3L	Del_17q24.3	0.642	1
PLAGL2	Amp_8q24.21	0.642	1
C11orf30	PRPS1	0.642	1
DIP2B	Amp_19q12	0.642	1
PIK3R1	4p-Del	0.642	1
LARP4B	Amp_19q12	0.642	1
PRPS1	Amp_6p21.1	0.642	1
PRPS1	Del_3p26.3	0.642	1
PTGDR	Amp_6p21.1	0.642	1
PTGDR	Del_3p26.3	0.642	1
7q-Amp	Del_14q11.2	0.642	1
Amp_2q33.1	Del_17q24.3	0.642	1
Amp_5p12	Del_6p25.3	0.642	1
Del_3p26.3	Del_7q31.1	0.642	1
OR4D10	7p-Amp	0.643	1
RHOA	ALPK2	0.643	1
RHOA	ASXL1	0.643	1
NF1	Del_10q23.31	0.643	1
IQCD	Amp_17q12	0.643	1
BMPR2	Amp_8p11.23	0.643	1
FYN	Del_15q22.33	0.643	1
CTNNB1	Del_10q25.2	0.643	1
NLRC4	Amp_6p21.1	0.644	1
BCORL1	Amp_6p21.1	0.644	1
SLC12A6	Amp_6p21.1	0.644	1
SLC12A6	Del_3p26.3	0.644	1
18q-Del	Del_3p14.2	0.644	1
8p-Del	Del_5q21.2	0.644	1
Amp_13q12.13	Del_10q23.31	0.644	1
Amp_20p11.21	Del_5q23.3	0.644	1
TXNDC2	Del_14q11.2	0.645	1
TXNDC2	Del_15q21.1	0.645	1
Del_6p25.3	Del_14q11.2	0.645	1
CRIPAK	C14orf184	0.646	1
B2M	Del_10q25.2	0.646	1
BCOR	Del_15q15.2	0.646	1
RPTN	BMPR2	0.646	1
RPTN	Del_10q25.2	0.646	1
THOC7	22q-Del	0.646	1
GRB2	Del_4p16.1	0.646	1
RSPH3	22q-Del	0.646	1
SMAD4	Del_8p22	0.646	1
HLA-A	Del_10q25.2	0.646	1
BMPR2	Del_8q11.1	0.646	1
GMNN	Amp_13q12.13	0.646	1
16p-Amp	Del_10q25.2	0.646	1
22q-Del	Del_2q22.1	0.646	1
Amp_17q24.1	Del_4q22.1	0.646	1
Del_2q22.1	Del_4p16.1	0.646	1
SOX9	CREBBP	0.647	1
ZFP36L2	PLEKHF2	0.647	1
ZFP36L2	VCX2	0.647	1
B2M	PLEKHF2	0.647	1
B2M	VCX2	0.647	1
BCOR	Amp_12p13.33	0.647	1
SMAD2	Amp_16p11.2	0.647	1
EGR1	RBPJ	0.647	1
EGR1	RBBP7	0.647	1
EGR1	16p-Amp	0.647	1
EGR1	Del_8q11.1	0.647	1
ST3GAL6	16p-Amp	0.647	1
ST3GAL6	Del_8q11.1	0.647	1
PLEKHF2	RBBP7	0.647	1
PLEKHF2	16p-Amp	0.647	1
PLEKHF2	Del_8q11.1	0.647	1
NLRC4	Del_10q23.31	0.647	1
C11orf30	Amp_12p13.33	0.647	1
VCX2	RBPJ	0.647	1
VCX2	RBBP7	0.647	1
VCX2	GMPS	0.647	1
VCX2	16p-Amp	0.647	1
VCX2	Del_8q11.1	0.647	1
SETD2	12p-Amp	0.647	1
9p-Amp	Del_5q22.2	0.647	1
Amp_8q24.21	Del_17q24.3	0.647	1
Amp_12p13.33	Del_3p26.3	0.647	1
Amp_12p13.33	Del_17q24.3	0.647	1
APC	TXNDC2	0.648	1
APC	DIP2B	0.648	1
APC	Amp_17q24.1	0.648	1
SELPLG	Amp_13q12.2	0.648	1
DDX26B	Del_1p33	0.648	1
Amp_1q31.1	Del_18q22.1	0.648	1
Del_3q26.31	Del_18q22.1	0.648	1
FAM123B	GGT1	0.649	1
FAM123B	TPRKB	0.649	1
SOX9	ASXL1	0.649	1
MLH1	TPRKB	0.649	1
MLH1	HIST1H1T	0.649	1
SMAD2	ASXL1	0.649	1
SMAD2	Amp_17q12	0.649	1
GGT1	RB1	0.649	1
SELPLG	Amp_20q13.12	0.649	1
CHUK	Del_3p14.2	0.649	1
ALPK2	Del_12p13.1	0.649	1
RLIM	Del_8p22	0.649	1
Amp_17q12	Del_5q23.3	0.649	1
APC	4q-Del	0.65	1
HIST1H1T	Del_18q21.2	0.65	1
Del_1p33	Del_10q23.31	0.65	1
FAM123B	Del_15q15.2	0.651	1
ACVR1B	ERBB2	0.651	1
ACVR1B	Amp_1q31.1	0.651	1
ACVR1B	Amp_17q24.1	0.651	1
MLH1	Del_15q15.2	0.651	1
SELPLG	12q-Amp	0.651	1
SELPLG	9p-Amp	0.651	1
SELPLG	Del_10q21.1	0.651	1
OR4D10	Amp_12p13.33	0.651	1
MAPK6	9p-Amp	0.651	1
FAM9A	20p-Amp	0.651	1
MVK	12p-Amp	0.651	1
ERBB2	KDM6A	0.651	1
PRRG1	4q-Del	0.651	1
PRRG1	Del_1p13.2	0.651	1
C2orf29	9p-Amp	0.651	1
SLC26A8	Del_10q21.1	0.651	1
ALDH1A3	9p-Amp	0.651	1
MAP4K3	8p-Amp	0.651	1
KDM6A	Amp_1q31.1	0.651	1
12p-Amp	Amp_10q22.3	0.651	1
12p-Amp	Del_19p13.3	0.651	1
20p-Amp	Del_2q22.1	0.651	1
20q-Amp	Del_12p13.1	0.651	1
2p-Amp	Del_8p22	0.651	1
2q-Amp	Del_8p22	0.651	1
6p-Amp	Del_8p22	0.651	1
9p-Amp	Del_16p13.3	0.651	1
Amp_11p15.5	Del_6p25.3	0.651	1
Amp_17q24.1	Del_16q23.1	0.651	1
Del_1p13.2	Del_19p13.3	0.651	1
APC	1p-Del	0.652	1
ACVR1B	IDH1	0.652	1
GGT1	L1TD1	0.652	1
GGT1	NEXN	0.652	1
GGT1	Del_3q26.31	0.652	1
SELPLG	21q-Del	0.652	1
TPRKB	5q-Del	0.652	1
TPRKB	Amp_2q33.1	0.652	1
TPRKB	Amp_19q12	0.652	1
ZBTB20	KDM6A	0.652	1
PLAGL2	20p-Del	0.652	1
RLIM	Amp_8p11.23	0.652	1
MPHOSPH10	Amp_8p11.23	0.652	1
C2orf29	21q-Del	0.652	1
MAP4K3	Del_16q23.1	0.652	1
NEXN	14q-Del	0.652	1
PTGDR	Del_4q22.1	0.652	1
HIST1H1T	5q-Del	0.652	1
HIST1H1T	Amp_2q33.1	0.652	1
HIST1H1T	Amp_19q12	0.652	1
HIST1H1T	Del_3q26.31	0.652	1
IDH1	Del_16q23.1	0.652	1
12q-Amp	13q-Amp	0.652	1
Amp_1q31.1	Amp_20p11.21	0.652	1
MLH1	Del_8p22	0.653	1
NF2	PCBP1	0.653	1
NF2	BIRC3	0.653	1
NF2	16q-Amp	0.653	1
NR1H3	Del_4q35.1	0.653	1
15q-Del	Del_3p14.2	0.653	1
Amp_12p13.33	Del_3p14.2	0.653	1
Amp_17q24.1	Del_1p36.11	0.653	1
ARID1A	C14orf184	0.654	1
FAM123B	ZFP36L2	0.654	1
FAM123B	Del_8q11.1	0.654	1
MLH1	16p-Amp	0.654	1
MLH1	Del_8q11.1	0.654	1
SMAD2	PRPS1	0.654	1
SMAD2	Del_7q31.1	0.654	1
WNT1	Del_15q11.2	0.654	1
P2RY13	Del_10q23.31	0.654	1
NR1H3	Del_10q23.31	0.654	1
PCBP1	Del_10q23.31	0.654	1
PRPS1	Del_12p13.1	0.654	1
PTGDR	Del_12p13.1	0.654	1
BIRC3	Del_10q23.31	0.654	1
16q-Amp	Del_10q23.31	0.654	1
Del_7q31.1	Del_12p13.1	0.654	1
WNT1	SMAD4	0.655	1
FAM9A	1p-Del	0.655	1
THOC7	RLIM	0.655	1
THOC7	MPHOSPH10	0.655	1
THOC7	1p-Del	0.655	1
THOC7	Del_5q21.2	0.655	1
RSPH3	RLIM	0.655	1
RSPH3	1p-Del	0.655	1
RSPH3	21q-Del	0.655	1
RSPH3	Del_5q21.2	0.655	1
RLIM	Del_2q22.1	0.655	1
MPHOSPH10	Del_2q22.1	0.655	1
SMAD4	C14orf184	0.655	1
GMNN	Del_10q23.31	0.655	1
APC	Del_4p16.1	0.656	1
TXNDC2	Del_15q15.2	0.656	1
ACVR1B	C14orf184	0.656	1
PIK3R1	Amp_2q33.1	0.656	1
C14orf184	Del_16q23.1	0.656	1
CDH1	Del_12p13.1	0.657	1
Amp_16p11.2	Del_17p12	0.657	1
Amp_20p12.1	Del_21q11.2	0.657	1
CRIPAK	L1TD1	0.658	1
CRIPAK	5q-Del	0.658	1
CRIPAK	Amp_2q33.1	0.658	1
PRKDC	20p-Del	0.658	1
MVK	Amp_10q22.3	0.658	1
ASXL1	9p-Amp	0.658	1
ASXL1	Del_10q21.1	0.658	1
PRRG1	Amp_10q22.3	0.658	1
ROS1	12p-Amp	0.658	1
17q-Amp	Del_15q22.33	0.658	1
Amp_17q12	Del_10q21.1	0.658	1
Del_1p36.11	Del_17q24.3	0.658	1
FAM123B	RB1	0.659	1
RHOA	DCLK2	0.659	1
RHOA	BIRC3	0.659	1
RHOA	13q-Amp	0.659	1
RHOA	16q-Amp	0.659	1
MVK	Del_21q11.2	0.659	1
P2RY13	IQCD	0.659	1
P2RY13	IFT57	0.659	1
IQCD	GPATCH8	0.659	1
IQCD	16q-Amp	0.659	1
PLEKHF2	8q-Amp	0.659	1
NR1H3	IFT57	0.659	1
PCBP1	IFT57	0.659	1
IFT57	16q-Amp	0.659	1
RSPH3	Amp_20p12.1	0.659	1
GPATCH8	ZNF486	0.659	1
HIST1H1T	Del_17p12	0.659	1
14q-Del	Amp_15q26.1	0.659	1
VCX2	8p-Amp	0.66	1
PRPS1	Del_21q21.1	0.66	1
CTNNB1	Del_21q21.1	0.66	1
20q-Amp	Del_3p14.2	0.66	1
21q-Del	Amp_20p12.1	0.66	1
Amp_6p21.1	Del_18q12.2	0.66	1
Amp_17q24.1	Del_21q21.1	0.66	1
Amp_20q12	Del_3p14.2	0.66	1
FAM123B	Del_10q23.31	0.661	1
MLH1	Del_10q23.31	0.661	1
ERBB2	DDX26B	0.661	1
PTCH1	8q-Amp	0.661	1
RLIM	Del_14q11.2	0.661	1
DDX26B	Amp_1q31.1	0.661	1
TOP2B	Del_6p25.3	0.661	1
TOP2B	Del_19p13.3	0.661	1
CDK12	12q-Amp	0.661	1
CDK12	Del_2p12	0.661	1
ARID1A	Del_3p14.2	0.662	1
SOX9	NF2	0.662	1
TXNDC2	8p-Del	0.662	1
CHUK	Amp_5p12	0.662	1
ATXN3L	CTNNB1	0.662	1
CTNNB1	5q-Del	0.662	1
Amp_5p12	Del_3p26.3	0.662	1
Amp_10q22.3	Del_5q23.3	0.662	1
Amp_19q12	Del_21q11.2	0.662	1
TXNDC2	2p-Amp	0.663	1
TXNDC2	2q-Amp	0.663	1
TXNDC2	6p-Amp	0.663	1
THOC7	Amp_8q24.21	0.663	1
GRB2	Amp_8q24.21	0.663	1
PIK3R1	7p-Amp	0.663	1
RSPH3	Amp_8q24.21	0.663	1
TOP2B	2p-Amp	0.663	1
TOP2B	2q-Amp	0.663	1
TOP2B	6p-Amp	0.663	1
TOP2B	Amp_15q26.1	0.663	1
PTEN	Amp_19q12	0.663	1
BMPR2	21q-Del	0.663	1
2p-Amp	Del_6p25.3	0.663	1
2p-Amp	Del_6q26	0.663	1
2p-Amp	Del_19p13.3	0.663	1
2q-Amp	Del_6p25.3	0.663	1
2q-Amp	Del_6q26	0.663	1
2q-Amp	Del_19p13.3	0.663	1
6p-Amp	Del_6p25.3	0.663	1
6p-Amp	Del_6q26	0.663	1
Amp_15q26.1	Del_6p25.3	0.663	1
Del_3q26.31	Del_18p11.31	0.663	1
FAM123B	Del_6q26	0.664	1
TXNDC2	20p-Amp	0.664	1
SMAD2	BCORL1	0.664	1
SMAD2	SLC12A6	0.664	1
OR4D10	EGR1	0.664	1
IFT57	Del_3p14.2	0.664	1
SLC12A6	Del_12p13.1	0.664	1
20p-Amp	Del_19p13.3	0.664	1
SOX9	TOP2B	0.665	1
MGA	Amp_8p11.21	0.665	1
HIST1H1T	Del_18q22.1	0.665	1
Del_5q23.3	Del_6p25.3	0.665	1
CRIPAK	Del_14q11.2	0.666	1
TP53	KDM6A	0.666	1
MLH1	Del_8p23.2	0.666	1
BCOR	SELPLG	0.666	1
WNT1	Amp_16p11.2	0.666	1
GGT1	MAPK6	0.666	1
GGT1	C2orf29	0.666	1
GGT1	FKBP9	0.666	1
GGT1	ALDH1A3	0.666	1
MAPK6	Del_17q24.3	0.666	1
PLEKHF2	Amp_20p11.21	0.666	1
ALG12	Amp_16p11.2	0.666	1
DIP2B	4p-Del	0.666	1
C2orf29	HIST1H1T	0.666	1
SMAD4	ZNF486	0.666	1
SLC26A8	HIST1H1T	0.666	1
FKBP9	Del_17q24.3	0.666	1
LARP4B	Del_16p13.3	0.666	1
6p-Amp	Del_21q11.2	0.666	1
Amp_15q26.1	Del_21q11.2	0.666	1
Del_1p36.11	Del_19p13.3	0.666	1
B2M	Del_15q11.2	0.667	1
ZBTB20	PRPS1	0.667	1
ZBTB20	Del_7q31.1	0.667	1
ASXL1	8q-Amp	0.667	1
MAP4K3	PRPS1	0.667	1
MAP4K3	PTGDR	0.667	1
MAP4K3	Del_7q31.1	0.667	1
CDK12	Del_3p14.2	0.667	1
PRPS1	17q-Amp	0.667	1
PRPS1	15q-Del	0.667	1
PTGDR	IDH1	0.667	1
PTGDR	17q-Amp	0.667	1
PTGDR	15q-Del	0.667	1
IDH1	Del_7q31.1	0.667	1
16p-Amp	Del_15q11.2	0.667	1
ACVR1B	BMPR2	0.668	1
GMNN	Amp_13q22.1	0.668	1
KDM6A	Del_10q25.2	0.668	1
17q-Amp	Del_4q35.1	0.668	1
Amp_11p15.5	Del_4q22.1	0.668	1
Amp_17q12	Del_14q11.2	0.668	1
FMN2	Del_3p14.2	0.669	1
SELPLG	Amp_20p11.21	0.669	1
OR4D10	Del_8p23.2	0.669	1
ERBB2	Del_10q23.31	0.669	1
RB1	Amp_1q31.1	0.669	1
C14orf184	Amp_13q12.13	0.669	1
7p-Amp	Del_3p26.3	0.669	1
Amp_8q24.21	Del_10q25.2	0.669	1
Amp_20p11.21	Del_16p13.3	0.669	1
RNF43	VCX2	0.67	1
PLEKHF2	4p-Del	0.67	1
PLAGL2	9p-Amp	0.67	1
PLAGL2	Del_10q21.1	0.67	1
VCX2	4p-Del	0.67	1
GMNN	Del_1p33	0.67	1
9p-Amp	Del_2p12	0.67	1
Amp_10q22.3	Amp_13q22.1	0.67	1
Amp_17q12	Del_22q13.32	0.67	1
ZFP36L2	THOC7	0.671	1
ZFP36L2	RSPH3	0.671	1
B2M	THOC7	0.671	1
B2M	GRB2	0.671	1
B2M	Del_2q22.1	0.671	1
CDH1	8p-Amp	0.671	1
STARD3NL	Del_4q22.1	0.671	1
FAM9A	RBPJ	0.671	1
FAM9A	RBBP7	0.671	1
FAM9A	16p-Amp	0.671	1
FAM9A	Del_8q11.1	0.671	1
RPTN	GRB2	0.671	1
RPTN	Del_2q22.1	0.671	1
THOC7	RBPJ	0.671	1
THOC7	HLA-A	0.671	1
GRB2	GMPS	0.671	1
GRB2	16p-Amp	0.671	1
GRB2	Del_8q11.1	0.671	1
RSPH3	RBPJ	0.671	1
RSPH3	HLA-A	0.671	1
RSPH3	16p-Amp	0.671	1
RSPH3	Del_8q11.1	0.671	1
RBBP7	Del_2q22.1	0.671	1
HLA-A	Del_2q22.1	0.671	1
GMPS	Del_2q22.1	0.671	1
BIRC3	Del_4q22.1	0.671	1
8q-Amp	Del_1p36.11	0.671	1
WNT1	Amp_8p11.23	0.672	1
PRKDC	2p-Amp	0.672	1
PRKDC	2q-Amp	0.672	1
GMNN	Amp_13q12.2	0.672	1
GMNN	Amp_20q12	0.672	1
7p-Amp	Del_1p13.2	0.672	1
Amp_20q13.12	Del_2q22.1	0.672	1
ZFP36L2	20p-Del	0.673	1
ERBB2	7q-Amp	0.673	1
RLIM	22q-Del	0.673	1
RBPJ	20p-Del	0.673	1
16p-Amp	20p-Del	0.673	1
FAM123B	12q-Amp	0.674	1
ACVR1B	ATXN3L	0.674	1
ACVR1B	Amp_19q12	0.674	1
ACVR1B	Del_3q26.31	0.674	1
CHUK	2p-Amp	0.674	1
CHUK	2q-Amp	0.674	1
CHUK	Amp_15q26.1	0.674	1
ATXN3L	Del_16q23.1	0.674	1
IQCD	Del_5q12.1	0.674	1
C11orf30	6p-Amp	0.674	1
C11orf30	Amp_15q26.1	0.674	1
DDX26B	Del_10q25.2	0.674	1
RB1	Amp_12p13.33	0.674	1
L1TD1	Del_16q23.1	0.674	1
SETD2	12q-Amp	0.674	1
NEXN	Del_16q23.1	0.674	1
KDM6A	Amp_2q33.1	0.674	1
2p-Amp	Del_3p26.3	0.674	1
2q-Amp	Del_3p26.3	0.674	1
6p-Amp	Del_3p26.3	0.674	1
Del_3q26.31	Del_16q23.1	0.674	1
CRIPAK	15q-Del	0.675	1
ERBB2	Amp_12p13.33	0.675	1
THOC7	7q-Amp	0.676	1
ASXL1	IDH1	0.676	1
C11orf30	12p-Amp	0.676	1
RSPH3	7q-Amp	0.676	1
RLIM	9p-Amp	0.676	1
BIRC3	CTNNB1	0.676	1
CTNNB1	16q-Amp	0.676	1
Amp_12p13.33	Del_5q12.1	0.676	1
APC	Del_1p33	0.677	1
APC	Del_5q12.1	0.677	1
BCL9	ALG12	0.677	1
BCL9	C14orf184	0.677	1
ERBB2	GMNN	0.677	1
C14orf184	SLC12A6	0.677	1
GMNN	Amp_1q31.1	0.677	1
WNT1	Del_15q21.1	0.678	1
RHOA	MVK	0.678	1
MVK	IQCD	0.678	1
NR1H3	Del_1p33	0.678	1
DCLK2	Del_1p33	0.678	1
APC	8q-Amp	0.679	1
CDH1	Del_5q21.2	0.679	1
BCOR	Del_2p12	0.679	1
NF1	Del_7q31.1	0.679	1
PLAGL2	Del_17q24.3	0.679	1
DIP2B	Del_2p12	0.679	1
PIK3R1	22q-Del	0.679	1
LARP4B	Del_2p12	0.679	1
6p-Amp	Del_22q13.32	0.679	1
8q-Amp	Del_4q22.1	0.679	1
9p-Amp	Del_10q21.1	0.679	1
15q-Del	Del_12p13.1	0.679	1
TXNDC2	Del_3p26.3	0.68	1
EGR1	Amp_17q12	0.68	1
CHUK	Del_6p25.3	0.68	1
CHUK	Del_19p13.3	0.68	1
ST3GAL6	ASXL1	0.68	1
C11orf30	Del_6p25.3	0.68	1
C11orf30	Del_19p13.3	0.68	1
RLIM	Del_1p36.11	0.68	1
SMAD4	SLC26A8	0.68	1
FYN	Del_21q21.1	0.68	1
BIRC3	Del_21q21.1	0.68	1
16q-Amp	Del_21q21.1	0.68	1
Amp_8q24.21	Del_6p25.3	0.68	1
CRIPAK	SELPLG	0.681	1
CRIPAK	MAPK6	0.681	1
CRIPAK	C2orf29	0.681	1
CRIPAK	FKBP9	0.681	1
GGT1	RLIM	0.681	1
GGT1	MPHOSPH10	0.681	1
GGT1	8p-Del	0.681	1
STARD3NL	VCX2	0.681	1
EGR1	16q-Amp	0.681	1
EGR1	Amp_8p11.23	0.681	1
THOC7	PIK3R1	0.681	1
ATXN3L	Del_7q31.1	0.681	1
TPRKB	MPHOSPH10	0.681	1
TPRKB	1p-Del	0.681	1
TPRKB	8p-Del	0.681	1
P2RY13	VCX2	0.681	1
ST3GAL6	16q-Amp	0.681	1
PLEKHF2	PCBP1	0.681	1
PLEKHF2	16q-Amp	0.681	1
PLEKHF2	Amp_8p11.23	0.681	1
NR1H3	VCX2	0.681	1
ASXL1	LARP4B	0.681	1
GRB2	PIK3R1	0.681	1
DIP2B	Amp_17q12	0.681	1
PCBP1	VCX2	0.681	1
RLIM	HIST1H1T	0.681	1
MPHOSPH10	HIST1H1T	0.681	1
VCX2	DCLK2	0.681	1
VCX2	FYN	0.681	1
VCX2	BIRC3	0.681	1
VCX2	16q-Amp	0.681	1
NEXN	PRPS1	0.681	1
NEXN	Del_7q31.1	0.681	1
PRPS1	Amp_2q33.1	0.681	1
PRPS1	Del_3q26.31	0.681	1
PTGDR	5q-Del	0.681	1
PTGDR	Amp_2q33.1	0.681	1
PTGDR	Del_3q26.31	0.681	1
17p-Del	Amp_17q24.1	0.681	1
5q-Del	Del_7q31.1	0.681	1
Amp_6p21.1	Del_15q21.1	0.681	1
Amp_19q12	Del_7q31.1	0.681	1
SELPLG	8q-Amp	0.682	1
OR4D10	Amp_8q24.21	0.682	1
C2orf29	7p-Amp	0.682	1
NEXN	Del_22q13.32	0.682	1
20p-Amp	Del_1p33	0.682	1
Amp_5p12	Del_12p13.1	0.682	1
Amp_20q13.12	Del_3p14.2	0.682	1
TP53	MAPK6	0.683	1
TP53	Del_16p13.3	0.683	1
ASXL1	Del_15q15.2	0.683	1
BCORL1	Del_5q21.2	0.683	1
CTNNB1	Del_15q22.33	0.683	1
Amp_16p11.2	Del_4q35.1	0.683	1
WNT1	Del_15q15.2	0.684	1
Amp_8p11.23	Del_14q11.2	0.684	1
Amp_11p15.5	Del_21q21.1	0.684	1
TP53	CREBBP	0.685	1
RHOA	12p-Amp	0.685	1
RHOA	Amp_11p15.5	0.685	1
IQCD	4q-Del	0.685	1
NLRC4	IDH1	0.685	1
NLRC4	17q-Amp	0.685	1
IFT57	12p-Amp	0.685	1
BMPR2	GMNN	0.685	1
BCORL1	IDH1	0.685	1
PRPS1	Amp_8p11.21	0.685	1
PTGDR	Amp_8p11.21	0.685	1
ZNF486	12p-Amp	0.685	1
CREBBP	Amp_10q22.3	0.685	1
GMNN	Del_10q25.2	0.685	1
17p-Del	Amp_11p15.5	0.685	1
8p-Del	Del_5q22.2	0.685	1
Amp_12p13.33	Amp_20q11.21	0.685	1
SMAD2	2p-Amp	0.686	1
SMAD2	Amp_15q26.1	0.686	1
NF1	17q-Amp	0.686	1
CREBBP	2p-Amp	0.686	1
CREBBP	6p-Amp	0.686	1
CREBBP	Amp_15q26.1	0.686	1
12p-Amp	8p-Del	0.686	1
6p-Amp	Del_12p13.1	0.686	1
8q-Amp	8p-Del	0.686	1
8p-Del	Del_16q23.1	0.686	1
Amp_10q22.3	Amp_20q13.12	0.686	1
Amp_15q26.1	Del_12p13.1	0.686	1
Amp_17q12	Del_15q22.33	0.686	1
OR4D10	Del_2q22.1	0.687	1
THOC7	DDX26B	0.687	1
PTCH1	12q-Amp	0.687	1
PTCH1	9p-Amp	0.687	1
RSPH3	DDX26B	0.687	1
DDX26B	Del_2q22.1	0.687	1
RBPJ	CDK12	0.687	1
C14orf184	Amp_5p12	0.687	1
CDK12	16p-Amp	0.687	1
CDK12	Del_8q11.1	0.687	1
CRIPAK	Del_2p12	0.688	1
20p-Amp	21q-Del	0.688	1
14q-Del	Amp_5p12	0.688	1
Amp_12p13.33	Del_21q11.2	0.688	1
ZFP36L2	Amp_8p11.21	0.689	1
P2RY13	Amp_12p13.33	0.689	1
RBPJ	Amp_8p11.21	0.689	1
C14orf184	Del_1p36.11	0.689	1
PRPS1	Amp_13q12.13	0.689	1
HIST1H1T	22q-Del	0.689	1
CTNNB1	21q-Del	0.689	1
APC	C2orf29	0.69	1
APC	Del_16p13.3	0.69	1
CRIPAK	4p-Del	0.69	1
SOX9	CHUK	0.69	1
BCOR	RLIM	0.69	1
STARD3NL	ERBB2	0.69	1
STARD3NL	Amp_1q31.1	0.69	1
P2RY13	Amp_17q24.1	0.69	1
PLEKHF2	SETD2	0.69	1
NEXN	Amp_16p11.2	0.69	1
BIRC3	Amp_1q31.1	0.69	1
BIRC3	Amp_17q24.1	0.69	1
IDH1	Del_4q22.1	0.69	1
17q-Amp	Del_4q22.1	0.69	1
7p-Amp	21q-Del	0.69	1
1p-Del	Del_17q24.3	0.69	1
5q-Del	Amp_16p11.2	0.69	1
Amp_2q33.1	Amp_16p11.2	0.69	1
Amp_20p12.1	Del_1p36.11	0.69	1
MLH1	Del_15q22.33	0.691	1
Amp_6p21.1	Del_15q15.2	0.691	1
NF2	6p-Amp	0.692	1
NF2	Amp_15q26.1	0.692	1
2p-Amp	Del_4q35.1	0.692	1
2q-Amp	Del_4q35.1	0.692	1
6p-Amp	Del_4q35.1	0.692	1
Del_3q26.31	Del_15q22.33	0.692	1
FAM123B	Amp_6p21.1	0.693	1
ATXN3L	Amp_13q12.13	0.693	1
SMAD4	Del_15q11.2	0.693	1
GMNN	Amp_20q11.21	0.693	1
2p-Amp	Del_8p23.2	0.693	1
2q-Amp	Del_8p23.2	0.693	1
6p-Amp	Del_8p23.2	0.693	1
Amp_8p11.23	Del_8q11.1	0.693	1
SELPLG	Del_7q31.1	0.694	1
NF2	Amp_10q22.3	0.694	1
MAPK6	Del_7q31.1	0.694	1
NLRC4	Amp_1q31.1	0.694	1
C2orf29	PTGDR	0.694	1
C2orf29	Del_7q31.1	0.694	1
TOP2B	Del_10q23.31	0.694	1
FKBP9	Del_7q31.1	0.694	1
C14orf184	Amp_13q22.1	0.694	1
IDH1	Amp_20p11.21	0.694	1
18p-Del	Amp_10q22.3	0.694	1
ZBTB20	Amp_8p11.21	0.695	1
IQCD	Del_5q23.3	0.695	1
ROS1	RBPJ	0.695	1
ATM	7p-Amp	0.695	1
HIST1H1T	Del_8p22	0.695	1
IDH1	Amp_8p11.21	0.695	1
ZNF486	Del_5q23.3	0.695	1
20q-Amp	Del_10q25.2	0.695	1
Amp_8p11.23	Del_4q35.1	0.695	1
Amp_20p12.1	Del_6p25.3	0.695	1
FAM123B	Del_7q31.1	0.696	1
ZFP36L2	GGT1	0.696	1
ZFP36L2	HIST1H1T	0.696	1
B2M	GGT1	0.696	1
ACVR1B	SELPLG	0.696	1
ACVR1B	C2orf29	0.696	1
CDH1	RSPH3	0.696	1
SMAD2	RB1	0.696	1
GGT1	RPTN	0.696	1
GGT1	RBBP7	0.696	1
GGT1	HLA-A	0.696	1
GGT1	GMPS	0.696	1
GGT1	Del_8q11.1	0.696	1
SELPLG	KDM6A	0.696	1
SELPLG	Del_16q23.1	0.696	1
TPRKB	HLA-A	0.696	1
TPRKB	16p-Amp	0.696	1
TPRKB	Del_8q11.1	0.696	1
PTCH1	Del_12p13.1	0.696	1
SMAD4	7p-Amp	0.696	1
RB1	Del_12p13.1	0.696	1
FKBP9	Del_16q23.1	0.696	1
HLA-A	HIST1H1T	0.696	1
ALDH1A3	KDM6A	0.696	1
ALDH1A3	Del_16q23.1	0.696	1
HIST1H1T	16p-Amp	0.696	1
GMNN	Amp_8p11.21	0.696	1
KDM6A	Del_16p13.3	0.696	1
FAM123B	Del_15q11.2	0.697	1
ACVR1B	Del_2p12	0.697	1
GGT1	Del_5q21.2	0.697	1
PIK3R1	Amp_16p11.2	0.697	1
HIST1H1T	Del_5q21.2	0.697	1
KDM6A	Del_2p12	0.697	1
4q-Del	Amp_8p11.21	0.697	1
TXNDC2	WNT1	0.698	1
WNT1	Del_6p25.3	0.698	1
WNT1	Del_6q26	0.698	1
WNT1	Del_19p13.3	0.698	1
FMN2	DCLK2	0.698	1
FMN2	FYN	0.698	1
RHOA	IQCD	0.698	1
RHOA	IFT57	0.698	1
ZBTB20	2p-Amp	0.698	1
ZBTB20	2q-Amp	0.698	1
ZBTB20	6p-Amp	0.698	1
IQCD	IFT57	0.698	1
ALG12	Del_6p25.3	0.698	1
ALG12	Del_6q26	0.698	1
ALG12	Del_19p13.3	0.698	1
PLAGL2	7q-Amp	0.698	1
DIP2B	9p-Amp	0.698	1
C2orf29	Del_21q11.2	0.698	1
RB1	Del_5q21.2	0.698	1
TOP2B	C14orf184	0.698	1
C14orf184	Amp_13q12.2	0.698	1
C14orf184	Del_19p13.3	0.698	1
MAP4K3	2p-Amp	0.698	1
MAP4K3	2q-Amp	0.698	1
MAP4K3	6p-Amp	0.698	1
MAP4K3	Amp_15q26.1	0.698	1
IDH1	2p-Amp	0.698	1
IDH1	2q-Amp	0.698	1
IDH1	6p-Amp	0.698	1
IDH1	Amp_15q26.1	0.698	1
20p-Amp	Del_1p13.2	0.698	1
7q-Amp	Del_2p12	0.698	1
20p-Del	Del_4q35.1	0.698	1
Del_14q11.2	Del_16q23.1	0.698	1
STARD3NL	8q-Amp	0.699	1
FAM9A	8p-Amp	0.699	1
EGR1	Amp_10q22.3	0.699	1
EGR1	Del_3p14.2	0.699	1
CHUK	Amp_6p21.1	0.699	1
CHUK	Del_3p26.3	0.699	1
MVK	VCX2	0.699	1
ST3GAL6	Amp_10q22.3	0.699	1
ST3GAL6	Del_3p14.2	0.699	1
PLEKHF2	Amp_10q22.3	0.699	1
PLEKHF2	Del_3p14.2	0.699	1
RSPH3	8p-Amp	0.699	1
CDK12	12p-Amp	0.699	1
8p-Amp	Del_2q22.1	0.699	1
Amp_8q24.21	Del_4q35.1	0.699	1
FAM123B	Del_17q24.3	0.7	1
B2M	12q-Amp	0.7	1
B2M	Del_10q21.1	0.7	1
ACVR1B	8p-Amp	0.7	1
SMAD2	Del_6p25.3	0.7	1
RPTN	12q-Amp	0.7	1
RPTN	9p-Amp	0.7	1
RPTN	Del_10q21.1	0.7	1
RPTN	Del_18p11.31	0.7	1
RBPJ	Del_10q21.1	0.7	1
RBBP7	12q-Amp	0.7	1
TOP2B	Del_12p13.1	0.7	1
HLA-A	Del_10q21.1	0.7	1
GMPS	12q-Amp	0.7	1
GMNN	20p-Del	0.7	1
16p-Amp	9p-Amp	0.7	1
9p-Amp	Del_8q11.1	0.7	1
17p-Del	Amp_12p13.33	0.7	1
Amp_1q31.1	Amp_20q11.21	0.7	1
Amp_20q13.12	Del_10q23.31	0.7	1
SMAD4	Del_16q23.1	0.701	1
Amp_17q12	Del_4q35.1	0.701	1
Del_5q22.2	Del_12p13.1	0.701	1
SMAD2	12p-Amp	0.702	1
RPTN	Del_15q21.1	0.702	1
ATXN3L	Del_4q35.1	0.702	1
P2RY13	Del_10q25.2	0.702	1
NR1H3	BMPR2	0.702	1
NR1H3	Del_10q25.2	0.702	1
PCBP1	BMPR2	0.702	1
FYN	Del_10q25.2	0.702	1
BCORL1	8q-Amp	0.702	1
MAP4K3	Del_3p14.2	0.702	1
BIRC3	Del_10q25.2	0.702	1
IDH1	Amp_5p12	0.702	1
IDH1	Del_3p14.2	0.702	1
12p-Amp	Amp_11p15.5	0.702	1
16p-Amp	Del_15q21.1	0.702	1
Amp_2q33.1	Del_4q35.1	0.702	1
Del_8q11.1	Del_14q11.2	0.702	1
ACVR1B	Amp_12p13.33	0.703	1
EGR1	Del_1p36.11	0.703	1
PLEKHF2	Del_1p36.11	0.703	1
IFT57	Del_21q11.2	0.703	1
Amp_12p13.33	Del_16q23.1	0.703	1
Del_16p13.3	Del_17p12	0.703	1
CRIPAK	ASXL1	0.704	1
CDH1	12q-Amp	0.704	1
STARD3NL	THOC7	0.704	1
STARD3NL	Del_2q22.1	0.704	1
FAM9A	PCBP1	0.704	1
FAM9A	BIRC3	0.704	1
FAM9A	16q-Amp	0.704	1
THOC7	P2RY13	0.704	1
THOC7	NR1H3	0.704	1
THOC7	PCBP1	0.704	1
THOC7	DCLK2	0.704	1
THOC7	FYN	0.704	1
THOC7	GPATCH8	0.704	1
ATXN3L	ASXL1	0.704	1
P2RY13	GRB2	0.704	1
NR1H3	GRB2	0.704	1
NR1H3	Del_2q22.1	0.704	1
ASXL1	L1TD1	0.704	1
ASXL1	Amp_19q12	0.704	1
ASXL1	Del_3q26.31	0.704	1
GRB2	GPATCH8	0.704	1
PCBP1	RSPH3	0.704	1
PCBP1	Del_2q22.1	0.704	1
RSPH3	DCLK2	0.704	1
RSPH3	16q-Amp	0.704	1
SMAD4	4p-Del	0.704	1
DCLK2	Del_2q22.1	0.704	1
FYN	Del_2q22.1	0.704	1
NEXN	Amp_17q12	0.704	1
BIRC3	Del_2q22.1	0.704	1
Amp_8p11.23	Del_3p14.2	0.704	1
TP53	IFT57	0.705	1
ZFP36L2	Amp_20p12.1	0.705	1
RBBP7	22q-Del	0.705	1
HLA-A	22q-Del	0.705	1
GMPS	Amp_20p12.1	0.705	1
6p-Amp	Del_4q22.1	0.705	1
Amp_15q26.1	Del_4q22.1	0.705	1
SMAD2	Amp_8p11.23	0.706	1
BCL9	5q-Del	0.706	1
BCL9	Amp_19q12	0.706	1
BCL9	Del_3q26.31	0.706	1
NLRC4	Del_3q26.31	0.706	1
PLAGL2	Amp_16p11.2	0.706	1
SLC12A6	Del_3q26.31	0.706	1
ATM	Amp_2q33.1	0.706	1
CTNNB1	Del_4q35.1	0.706	1
Amp_12p13.33	Amp_20q12	0.706	1
APC	RHOA	0.707	1
APC	IQCD	0.707	1
THOC7	Amp_13q12.13	0.707	1
PRRG1	Del_1p33	0.707	1
9p-Amp	Del_17p12	0.707	1
Amp_13q12.13	Del_2q22.1	0.707	1
RNF43	THOC7	0.708	1
STARD3NL	Del_5q22.2	0.708	1
PRKDC	C2orf29	0.708	1
RLIM	Del_7q31.1	0.708	1
GPATCH8	Del_5q22.2	0.708	1
PRPS1	1p-Del	0.708	1
1p-Del	Del_7q31.1	0.708	1
FAM123B	FBXW7	0.709	1
WNT1	Amp_6p21.1	0.709	1
WNT1	Del_3p26.3	0.709	1
EGR1	Del_5q12.1	0.709	1
MGA	PLEKHF2	0.709	1
ALG12	C11orf30	0.709	1
ALG12	Amp_6p21.1	0.709	1
ALG12	Del_3p26.3	0.709	1
C11orf30	C14orf184	0.709	1
SLC26A8	8p-Amp	0.709	1
C14orf184	Del_3p26.3	0.709	1
8p-Amp	Del_16p13.3	0.709	1
14q-Del	Amp_8p11.23	0.709	1
21q-Del	Amp_5p12	0.709	1
ARID1A	OR4D10	0.71	1
ARID1A	GRB2	0.71	1
ARID1A	Del_5q21.2	0.71	1
B2M	Del_15q15.2	0.71	1
SELPLG	Amp_20q12	0.71	1
RPTN	Del_15q15.2	0.71	1
GRB2	Del_15q11.2	0.71	1
RLIM	Del_8p23.2	0.71	1
SLC12A6	Del_10q25.2	0.71	1
GMNN	20q-Amp	0.71	1
13q-Amp	Del_10q25.2	0.71	1
16p-Amp	Del_15q15.2	0.71	1
20p-Amp	1p-Del	0.71	1
GGT1	OR4D10	0.711	1
GGT1	DDX26B	0.711	1
OR4D10	HIST1H1T	0.711	1
NF2	Del_10q23.31	0.711	1
RHOA	PRKDC	0.711	1
ATXN3L	2p-Amp	0.711	1
ATXN3L	2q-Amp	0.711	1
ATXN3L	6p-Amp	0.711	1
ATXN3L	Amp_15q26.1	0.711	1
L1TD1	2p-Amp	0.711	1
L1TD1	2q-Amp	0.711	1
L1TD1	6p-Amp	0.711	1
L1TD1	Amp_15q26.1	0.711	1
C14orf184	18p-Del	0.711	1
C14orf184	Amp_20p11.21	0.711	1
NEXN	2p-Amp	0.711	1
NEXN	2q-Amp	0.711	1
IDH1	Amp_12p13.33	0.711	1
17q-Amp	Amp_12p13.33	0.711	1
2p-Amp	5q-Del	0.711	1
2q-Amp	5q-Del	0.711	1
2q-Amp	Del_3q26.31	0.711	1
6p-Amp	5q-Del	0.711	1
5q-Del	Amp_15q26.1	0.711	1
Amp_10q22.3	Del_4q22.1	0.711	1
Amp_15q26.1	Del_3q26.31	0.711	1
FBXW7	Del_8q11.1	0.712	1
ROS1	Del_6p25.3	0.712	1
Amp_15q26.1	Del_21q21.1	0.712	1
CTNNB1	Del_8p23.2	0.713	1
ARID1A	17q-Amp	0.714	1
ZFP36L2	DIP2B	0.714	1
ZFP36L2	Del_17q24.3	0.714	1
BCOR	RPTN	0.714	1
BCOR	HLA-A	0.714	1
BCOR	16p-Amp	0.714	1
BCOR	Del_8q11.1	0.714	1
RPTN	DIP2B	0.714	1
RPTN	Del_17q24.3	0.714	1
PTCH1	Del_7q31.1	0.714	1
DIP2B	16p-Amp	0.714	1
DCLK2	7q-Amp	0.714	1
PTEN	GMNN	0.714	1
HLA-A	Del_17q24.3	0.714	1
LARP4B	16p-Amp	0.714	1
ATM	16p-Amp	0.714	1
NF1	7q-Amp	0.715	1
ALG12	Amp_20p12.1	0.715	1
8q-Amp	Del_12p13.1	0.715	1
ZFP36L2	21q-Del	0.716	1
ZFP36L2	Del_5q21.2	0.716	1
B2M	21q-Del	0.716	1
RHOA	Del_10q23.31	0.716	1
BCL9	Del_2p12	0.716	1
NLRC4	Del_2p12	0.716	1
IFT57	Del_10q23.31	0.716	1
BCORL1	Del_2p12	0.716	1
SLC12A6	Del_2p12	0.716	1
ZNF486	Del_10q23.31	0.716	1
GMNN	12q-Amp	0.716	1
GMNN	Del_10q21.1	0.716	1
18p-Del	Amp_6p21.1	0.716	1
Amp_6p21.1	Amp_20p11.21	0.716	1
Del_5q21.2	Del_8q11.1	0.716	1
TP53	FBXW7	0.717	1
FAM123B	Del_3p14.2	0.717	1
THOC7	ALPK2	0.717	1
THOC7	ASXL1	0.717	1
ASXL1	GRB2	0.717	1
ASXL1	Del_2q22.1	0.717	1
PTGDR	Amp_13q22.1	0.717	1
Amp_13q22.1	Del_7q31.1	0.717	1
ACVR1B	CDK12	0.718	1
RHOA	PLEKHF2	0.718	1
RHOA	VCX2	0.718	1
EGR1	IQCD	0.718	1
CHUK	Del_10q23.31	0.718	1
IQCD	PLEKHF2	0.718	1
IQCD	VCX2	0.718	1
PLEKHF2	ZNF486	0.718	1
IFT57	VCX2	0.718	1
VCX2	ZNF486	0.718	1
CDK12	Del_16q23.1	0.718	1
Amp_12p13.33	Del_8p23.2	0.718	1
TXNDC2	IDH1	0.719	1
MVK	ERBB2	0.719	1
MVK	Amp_1q31.1	0.719	1
MVK	Del_21q21.1	0.719	1
ZBTB20	Del_6p25.3	0.719	1
PLEKHF2	4q-Del	0.719	1
PLEKHF2	Del_1p13.2	0.719	1
PRRG1	Amp_17q24.1	0.719	1
MPHOSPH10	Del_16q23.1	0.719	1
VCX2	4q-Del	0.719	1
VCX2	Amp_11p15.5	0.719	1
MAP4K3	Del_19p13.3	0.719	1
ATM	Amp_8q24.21	0.719	1
CTNNB1	4p-Del	0.719	1
17q-Amp	Del_6p25.3	0.719	1
14q-Del	Del_6p25.3	0.719	1
Amp_10q22.3	Amp_17q24.1	0.719	1
Amp_20p11.21	Del_17q24.3	0.719	1
SMAD2	WNT1	0.72	1
SMAD2	ALG12	0.72	1
SELPLG	4p-Del	0.72	1
ALG12	Del_12p13.1	0.72	1
C14orf184	Del_12p13.1	0.72	1
12p-Amp	Del_5q23.3	0.72	1
9p-Amp	Amp_11p15.5	0.72	1
21q-Del	Amp_13q12.2	0.72	1
Amp_11p15.5	Del_8p22	0.72	1
FAM9A	Amp_10q22.3	0.721	1
THOC7	PRRG1	0.721	1
MVK	GRB2	0.721	1
MVK	RSPH3	0.721	1
MVK	Del_2q22.1	0.721	1
PRRG1	RSPH3	0.721	1
PRRG1	Del_2q22.1	0.721	1
PRPS1	Amp_13q12.2	0.721	1
8p-Del	Amp_16p11.2	0.721	1
Amp_20q12	Del_10q25.2	0.721	1
ZFP36L2	PTGDR	0.722	1
ZFP36L2	Del_7q31.1	0.722	1
B2M	PRPS1	0.722	1
B2M	Del_7q31.1	0.722	1
GGT1	PIK3R1	0.722	1
RPTN	PTGDR	0.722	1
RPTN	Del_7q31.1	0.722	1
FBXW7	Amp_16p11.2	0.722	1
ATXN3L	Amp_5p12	0.722	1
TPRKB	PIK3R1	0.722	1
PIK3R1	HIST1H1T	0.722	1
RLIM	8p-Del	0.722	1
RBPJ	PRPS1	0.722	1
RBPJ	Del_7q31.1	0.722	1
RBBP7	PRPS1	0.722	1
RBBP7	Del_7q31.1	0.722	1
HLA-A	Del_7q31.1	0.722	1
PRPS1	16p-Amp	0.722	1
PRPS1	Del_8q11.1	0.722	1
PTGDR	16p-Amp	0.722	1
PTGDR	Del_8q11.1	0.722	1
HIST1H1T	Del_18q12.2	0.722	1
16p-Amp	Del_7q31.1	0.722	1
Amp_2q33.1	Amp_5p12	0.722	1
Amp_10q22.3	Del_17p12	0.722	1
Del_7q31.1	Del_8q11.1	0.722	1
MLH1	SMAD2	0.723	1
SELPLG	6p-Amp	0.723	1
MAPK6	2p-Amp	0.723	1
MAPK6	2q-Amp	0.723	1
MAPK6	Amp_15q26.1	0.723	1
RHOA	Amp_13q12.13	0.723	1
THOC7	7p-Amp	0.723	1
THOC7	8q-Amp	0.723	1
GRB2	7p-Amp	0.723	1
GRB2	8q-Amp	0.723	1
RSPH3	8q-Amp	0.723	1
C2orf29	2p-Amp	0.723	1
C2orf29	2q-Amp	0.723	1
C2orf29	Amp_15q26.1	0.723	1
SLC26A8	6p-Amp	0.723	1
SLC26A8	Amp_15q26.1	0.723	1
FKBP9	2p-Amp	0.723	1
FKBP9	2q-Amp	0.723	1
FKBP9	6p-Amp	0.723	1
FKBP9	Amp_15q26.1	0.723	1
ALDH1A3	2p-Amp	0.723	1
ALDH1A3	2q-Amp	0.723	1
ALDH1A3	Amp_15q26.1	0.723	1
2p-Amp	Del_16p13.3	0.723	1
2q-Amp	Del_16p13.3	0.723	1
6p-Amp	Del_16p13.3	0.723	1
8p-Amp	Amp_16p11.2	0.723	1
20p-Del	Del_4q22.1	0.723	1
5q-Del	Amp_20p12.1	0.723	1
Amp_15q26.1	Del_16p13.3	0.723	1
Amp_20q11.21	Del_10q23.31	0.723	1
Del_3p14.2	Del_10q23.31	0.723	1
TP53	GGT1	0.724	1
WNT1	Del_21q11.2	0.724	1
LARP4B	GMNN	0.724	1
GMNN	Del_17q24.3	0.724	1
CTNNB1	Del_1p13.2	0.724	1
Amp_13q12.13	Del_6q26	0.724	1
Del_4p16.1	Del_6p25.3	0.724	1
APC	NEXN	0.725	1
APC	Del_3q26.31	0.725	1
FMN2	2p-Amp	0.725	1
FMN2	2q-Amp	0.725	1
OR4D10	12q-Amp	0.725	1
RLIM	14q-Del	0.725	1
DDX26B	9p-Amp	0.725	1
DDX26B	Del_10q21.1	0.725	1
GMNN	Del_8p22	0.725	1
20p-Amp	Del_15q21.1	0.725	1
FAM123B	NR1H3	0.726	1
MLH1	PCBP1	0.726	1
MLH1	16q-Amp	0.726	1
THOC7	SETD2	0.726	1
RSPH3	SETD2	0.726	1
CTNNB1	Del_21q11.2	0.726	1
18q-Del	Amp_6p21.1	0.726	1
8p-Del	Amp_17q24.1	0.726	1
ARID1A	12q-Amp	0.727	1
ACVR1B	Amp_17q12	0.727	1
GGT1	STARD3NL	0.727	1
GGT1	P2RY13	0.727	1
GGT1	NR1H3	0.727	1
GGT1	PCBP1	0.727	1
GGT1	FYN	0.727	1
GGT1	GPATCH8	0.727	1
GGT1	BIRC3	0.727	1
STARD3NL	TPRKB	0.727	1
SELPLG	BCL9	0.727	1
TPRKB	NR1H3	0.727	1
TPRKB	PCBP1	0.727	1
TPRKB	FYN	0.727	1
TPRKB	BIRC3	0.727	1
BCL9	C2orf29	0.727	1
NR1H3	HIST1H1T	0.727	1
NLRC4	Del_16p13.3	0.727	1
PCBP1	HIST1H1T	0.727	1
C2orf29	BCORL1	0.727	1
C2orf29	SLC12A6	0.727	1
C2orf29	Del_15q22.33	0.727	1
GPATCH8	HIST1H1T	0.727	1
MAP4K3	Amp_11p15.5	0.727	1
HIST1H1T	16q-Amp	0.727	1
IDH1	12p-Amp	0.727	1
IDH1	4q-Del	0.727	1
IDH1	Del_1p13.2	0.727	1
KDM6A	Del_5q22.2	0.727	1
9p-Amp	Del_15q11.2	0.727	1
8p-Del	Del_21q21.1	0.727	1
CRIPAK	RPTN	0.728	1
CRIPAK	RBBP7	0.728	1
CRIPAK	GMPS	0.728	1
SOX9	EGR1	0.728	1
SOX9	ST3GAL6	0.728	1
SOX9	PLEKHF2	0.728	1
ERBB2	Del_8p23.2	0.728	1
ROS1	Del_10q21.1	0.728	1
VCX2	Del_5q23.3	0.728	1
L1TD1	Del_3p14.2	0.728	1
5q-Del	Del_3p14.2	0.728	1
Amp_10q22.3	Amp_12p13.33	0.728	1
Amp_19q12	Del_3p14.2	0.728	1
SELPLG	Del_18p11.31	0.729	1
Amp_16p11.2	Del_14q11.2	0.729	1
Del_16p13.3	Del_18p11.31	0.729	1
DIP2B	Del_21q11.2	0.73	1
17p-Del	Amp_6p21.1	0.73	1
FAM123B	Amp_1q31.1	0.731	1
WNT1	17q-Amp	0.731	1
FBXW7	Del_3q26.31	0.731	1
ZBTB20	ALG12	0.731	1
ZBTB20	C14orf184	0.731	1
ALG12	MAP4K3	0.731	1
ALG12	17q-Amp	0.731	1
C14orf184	MAP4K3	0.731	1
C14orf184	17q-Amp	0.731	1
BMPR2	Amp_5p12	0.731	1
CDK12	Amp_8p11.23	0.731	1
HIST1H1T	7q-Amp	0.731	1
CREBBP	Del_3p14.2	0.731	1
8q-Amp	Del_3p14.2	0.731	1
Amp_8q24.21	Del_1p36.11	0.731	1
Amp_20p12.1	Del_14q11.2	0.731	1
Del_3p14.2	Del_15q22.33	0.731	1
CRIPAK	GMNN	0.732	1
SELPLG	Amp_17q12	0.732	1
NF1	Del_6p25.3	0.732	1
ATXN3L	Del_21q21.1	0.732	1
ALPK2	Del_16p13.3	0.732	1
ASXL1	C2orf29	0.732	1
GMNN	13q-Amp	0.732	1
CTNNB1	Del_5q22.2	0.732	1
CTNNB1	Del_8p22	0.732	1
8p-Amp	Amp_13q12.2	0.732	1
Amp_15q26.1	Del_5q22.2	0.732	1
Amp_17q12	Del_4q22.1	0.732	1
Del_3q26.31	Del_21q21.1	0.732	1
CRIPAK	DIP2B	0.733	1
CRIPAK	LARP4B	0.733	1
CRIPAK	Del_3p14.2	0.733	1
RNF43	ERBB2	0.733	1
CDH1	L1TD1	0.733	1
MGA	SMAD4	0.733	1
RLIM	Amp_16p11.2	0.733	1
MPHOSPH10	Amp_16p11.2	0.733	1
PTGDR	22q-Del	0.733	1
PTGDR	Del_4p16.1	0.733	1
ATM	12q-Amp	0.733	1
22q-Del	Del_7q31.1	0.733	1
SMAD4	DCLK2	0.734	1
PRPS1	Amp_20p11.21	0.734	1
18p-Del	Del_7q31.1	0.734	1
TXNDC2	Del_2p12	0.735	1
ACVR1B	Del_10q21.1	0.735	1
RHOA	Del_4q35.1	0.735	1
NF1	PLEKHF2	0.735	1
FBXW7	HIST1H1T	0.735	1
CHUK	MAP4K3	0.735	1
GRB2	Del_3p14.2	0.735	1
PLAGL2	Del_6p25.3	0.735	1
PLAGL2	Del_6q26	0.735	1
PLAGL2	Del_19p13.3	0.735	1
C11orf30	17q-Amp	0.735	1
TOP2B	21q-Del	0.735	1
TOP2B	Del_2p12	0.735	1
SLC12A6	Del_4q22.1	0.735	1
IDH1	Del_3p26.3	0.735	1
KDM6A	Del_10q21.1	0.735	1
17q-Amp	Del_3p26.3	0.735	1
9p-Amp	Del_5q23.3	0.735	1
9p-Amp	Del_16q23.1	0.735	1
Del_2p12	Del_6p25.3	0.735	1
Del_2q22.1	Del_3p14.2	0.735	1
OR4D10	Del_7q31.1	0.736	1
NF2	C2orf29	0.736	1
NF2	FKBP9	0.736	1
NF2	Del_16p13.3	0.736	1
EGR1	VCX2	0.736	1
ST3GAL6	PLEKHF2	0.736	1
ST3GAL6	VCX2	0.736	1
GRB2	Amp_13q22.1	0.736	1
RLIM	2p-Amp	0.736	1
RLIM	2q-Amp	0.736	1
RLIM	Amp_15q26.1	0.736	1
MPHOSPH10	2p-Amp	0.736	1
MPHOSPH10	2q-Amp	0.736	1
MPHOSPH10	6p-Amp	0.736	1
MPHOSPH10	Amp_15q26.1	0.736	1
DDX26B	PTGDR	0.736	1
DDX26B	Del_7q31.1	0.736	1
C14orf184	Del_22q13.32	0.736	1
2p-Amp	1p-Del	0.736	1
2q-Amp	1p-Del	0.736	1
6p-Amp	1p-Del	0.736	1
7q-Amp	Del_4p16.1	0.736	1
TXNDC2	Amp_1q31.1	0.737	1
MLH1	MGA	0.737	1
MLH1	7p-Amp	0.737	1
THOC7	Del_14q11.2	0.737	1
THOC7	Del_15q21.1	0.737	1
ERBB2	TOP2B	0.737	1
ERBB2	Del_6q26	0.737	1
RB1	IDH1	0.737	1
TOP2B	Amp_1q31.1	0.737	1
PTEN	Amp_1q31.1	0.737	1
CDK12	Amp_16p11.2	0.737	1
Amp_1q31.1	Del_6p25.3	0.737	1
Amp_13q12.13	Del_3p14.2	0.737	1
Del_2q22.1	Del_15q21.1	0.737	1
TXNDC2	ATXN3L	0.738	1
TXNDC2	L1TD1	0.738	1
TXNDC2	Amp_19q12	0.738	1
BCOR	OR4D10	0.738	1
RHOA	THOC7	0.738	1
RHOA	GRB2	0.738	1
RHOA	Del_2q22.1	0.738	1
FAM9A	IQCD	0.738	1
THOC7	IFT57	0.738	1
THOC7	ZNF486	0.738	1
ATXN3L	Del_6q26	0.738	1
ZBTB20	SMAD4	0.738	1
IQCD	Del_2q22.1	0.738	1
PCBP1	CDK12	0.738	1
IFT57	Del_2q22.1	0.738	1
SMAD4	MAP4K3	0.738	1
SMAD4	IDH1	0.738	1
L1TD1	Del_6q26	0.738	1
TOP2B	5q-Del	0.738	1
TOP2B	Amp_2q33.1	0.738	1
TOP2B	Del_3q26.31	0.738	1
NEXN	Del_19p13.3	0.738	1
HIST1H1T	8p-Amp	0.738	1
HIST1H1T	Del_8p23.2	0.738	1
ZNF486	Del_2q22.1	0.738	1
7q-Amp	Del_19p13.3	0.738	1
8p-Amp	Del_10q25.2	0.738	1
9p-Amp	Del_15q22.33	0.738	1
5q-Del	Del_6p25.3	0.738	1
5q-Del	Del_6q26	0.738	1
Amp_2q33.1	Del_6q26	0.738	1
Amp_2q33.1	Del_19p13.3	0.738	1
Amp_8p11.21	Del_3q26.31	0.738	1
Amp_19q12	Del_6p25.3	0.738	1
PCBP1	20p-Amp	0.739	1
SMAD4	Del_7q31.1	0.739	1
MAP4K3	Del_5q23.3	0.739	1
CDH1	Del_5q22.2	0.74	1
CHUK	Amp_20p12.1	0.74	1
ATXN3L	Amp_13q12.2	0.74	1
MGA	Del_3q26.31	0.74	1
BCL9	20p-Del	0.74	1
NLRC4	20p-Del	0.74	1
PIK3R1	12p-Amp	0.74	1
GMNN	Del_16q23.1	0.74	1
13q-Amp	Amp_11p15.5	0.74	1
ZFP36L2	Del_16q23.1	0.741	1
ACVR1B	SETD2	0.741	1
BCOR	12p-Amp	0.741	1
EGR1	Amp_8p11.21	0.741	1
RPTN	Del_16q23.1	0.741	1
THOC7	Amp_13q12.2	0.741	1
ZBTB20	Amp_8p11.23	0.741	1
HLA-A	Del_16q23.1	0.741	1
LARP4B	12p-Amp	0.741	1
MAP4K3	Amp_8p11.23	0.741	1
SETD2	Del_16q23.1	0.741	1
PRPS1	21q-Del	0.741	1
PRPS1	Del_5q21.2	0.741	1
IDH1	Amp_8p11.23	0.741	1
CREBBP	Amp_12p13.33	0.741	1
WNT1	ATXN3L	0.742	1
WNT1	L1TD1	0.742	1
WNT1	NEXN	0.742	1
WNT1	5q-Del	0.742	1
WNT1	Amp_2q33.1	0.742	1
WNT1	Amp_19q12	0.742	1
WNT1	Del_3q26.31	0.742	1
MAPK6	Amp_5p12	0.742	1
ATXN3L	C14orf184	0.742	1
ATXN3L	15q-Del	0.742	1
ALG12	NEXN	0.742	1
ALG12	5q-Del	0.742	1
ALG12	Amp_2q33.1	0.742	1
ALG12	Amp_19q12	0.742	1
SMAD4	TOP2B	0.742	1
SMAD4	Del_6p25.3	0.742	1
L1TD1	C14orf184	0.742	1
C14orf184	NEXN	0.742	1
C14orf184	5q-Del	0.742	1
C14orf184	Amp_2q33.1	0.742	1
C14orf184	Amp_19q12	0.742	1
ALDH1A3	Amp_5p12	0.742	1
CDK12	Del_15q21.1	0.742	1
PRPS1	8p-Del	0.742	1
PTGDR	8p-Del	0.742	1
15q-Del	Amp_2q33.1	0.742	1
15q-Del	Del_3q26.31	0.742	1
5q-Del	Amp_12p13.33	0.742	1
GGT1	MVK	0.743	1
GGT1	PRRG1	0.743	1
GGT1	Amp_10q22.3	0.743	1
TPRKB	Amp_10q22.3	0.743	1
MVK	HIST1H1T	0.743	1
HIST1H1T	Amp_10q22.3	0.743	1
Amp_20q13.12	Del_7q31.1	0.743	1
APC	Del_21q21.1	0.744	1
THOC7	MGA	0.744	1
THOC7	Del_5q12.1	0.744	1
PRRG1	Del_5q22.2	0.744	1
RSPH3	Del_5q12.1	0.744	1
SETD2	Del_1p33	0.744	1
ATM	Amp_12p13.33	0.744	1
14q-Del	Del_10q25.2	0.744	1
Del_2p12	Del_14q11.2	0.744	1
FAM123B	6p-Amp	0.745	1
MLH1	2p-Amp	0.745	1
MLH1	2q-Amp	0.745	1
MLH1	6p-Amp	0.745	1
CHUK	Del_2p12	0.745	1
PLAGL2	Amp_6p21.1	0.745	1
PLAGL2	Del_3p26.3	0.745	1
C11orf30	Del_2p12	0.745	1
CTNNB1	1p-Del	0.745	1
Amp_6p21.1	Del_1p33	0.745	1
Amp_20q11.21	Del_2q22.1	0.745	1
Del_1p36.11	Del_3p14.2	0.745	1
Del_2p12	Del_3p26.3	0.745	1
APC	MVK	0.746	1
EGR1	Del_21q11.2	0.746	1
RPTN	PIK3R1	0.746	1
PLEKHF2	Del_21q11.2	0.746	1
PIK3R1	Amp_5p12	0.746	1
VCX2	Del_21q11.2	0.746	1
HIST1H1T	4p-Del	0.746	1
Amp_20q13.12	Del_2p12	0.746	1
APC	7q-Amp	0.747	1
TP53	PRKDC	0.747	1
DDX26B	21q-Del	0.747	1
SLC12A6	8p-Amp	0.747	1
8q-Amp	Amp_1q31.1	0.747	1
SELPLG	Amp_20q11.21	0.748	1
RHOA	Amp_1q31.1	0.748	1
EGR1	Del_10q23.31	0.748	1
PRKDC	12p-Amp	0.748	1
NF1	Amp_15q26.1	0.748	1
ERBB2	ASXL1	0.748	1
ERBB2	IFT57	0.748	1
IQCD	Amp_17q24.1	0.748	1
PLEKHF2	Del_10q23.31	0.748	1
C14orf184	Del_4q35.1	0.748	1
ZNF486	Amp_1q31.1	0.748	1
TP53	HLA-A	0.749	1
TP53	16p-Amp	0.749	1
TP53	20p-Del	0.749	1
TP53	Del_8q11.1	0.749	1
ZFP36L2	2p-Amp	0.749	1
ZFP36L2	2q-Amp	0.749	1
ZFP36L2	6p-Amp	0.749	1
ZFP36L2	Amp_15q26.1	0.749	1
B2M	2p-Amp	0.749	1
B2M	2q-Amp	0.749	1
B2M	6p-Amp	0.749	1
B2M	Amp_15q26.1	0.749	1
NF2	Del_10q21.1	0.749	1
RPTN	2p-Amp	0.749	1
RPTN	2q-Amp	0.749	1
RPTN	6p-Amp	0.749	1
RPTN	Amp_15q26.1	0.749	1
RBPJ	6p-Amp	0.749	1
RBPJ	Amp_15q26.1	0.749	1
RBBP7	2p-Amp	0.749	1
RBBP7	2q-Amp	0.749	1
RBBP7	6p-Amp	0.749	1
RBBP7	Amp_15q26.1	0.749	1
HLA-A	2p-Amp	0.749	1
HLA-A	2q-Amp	0.749	1
HLA-A	6p-Amp	0.749	1
HLA-A	Amp_15q26.1	0.749	1
GMPS	2p-Amp	0.749	1
GMPS	2q-Amp	0.749	1
GMPS	6p-Amp	0.749	1
GMPS	Amp_15q26.1	0.749	1
GMNN	Amp_16p11.2	0.749	1
16p-Amp	2p-Amp	0.749	1
16p-Amp	2q-Amp	0.749	1
16p-Amp	Amp_15q26.1	0.749	1
2p-Amp	Del_8q11.1	0.749	1
2q-Amp	Del_8q11.1	0.749	1
6p-Amp	Del_8q11.1	0.749	1
P2RY13	12q-Amp	0.75	1
NR1H3	9p-Amp	0.75	1
PCBP1	12q-Amp	0.75	1
PCBP1	Del_10q21.1	0.75	1
DCLK2	Del_10q21.1	0.75	1
FYN	12q-Amp	0.75	1
FYN	Del_10q21.1	0.75	1
GPATCH8	12q-Amp	0.75	1
BIRC3	12q-Amp	0.75	1
16q-Amp	9p-Amp	0.75	1
Amp_2q33.1	Del_15q11.2	0.75	1
Del_3q26.31	Del_15q11.2	0.75	1
CRIPAK	DDX26B	0.751	1
FAM123B	KDM6A	0.751	1
ACVR1B	DIP2B	0.751	1
P2RY13	PTGDR	0.751	1
NR1H3	PRPS1	0.751	1
NR1H3	PTGDR	0.751	1
NR1H3	Del_7q31.1	0.751	1
PTCH1	Amp_8q24.21	0.751	1
PCBP1	PRPS1	0.751	1
PCBP1	Del_7q31.1	0.751	1
BMPR2	Del_6p25.3	0.751	1
FYN	PRPS1	0.751	1
GPATCH8	PTGDR	0.751	1
GPATCH8	Del_7q31.1	0.751	1
PRPS1	BIRC3	0.751	1
PRPS1	16q-Amp	0.751	1
BIRC3	Del_7q31.1	0.751	1
12p-Amp	5q-Del	0.751	1
16q-Amp	Del_7q31.1	0.751	1
4q-Del	Amp_2q33.1	0.751	1
Amp_6p21.1	Del_17p12	0.751	1
Del_16q23.1	Del_17q24.3	0.751	1
FAM123B	IDH1	0.752	1
SMAD2	17q-Amp	0.752	1
FMN2	5q-Del	0.752	1
DIP2B	Del_22q13.32	0.752	1
MAP4K3	Del_12p13.1	0.752	1
16q-Amp	Del_15q11.2	0.752	1
WNT1	SELPLG	0.753	1
WNT1	C2orf29	0.753	1
WNT1	Del_16p13.3	0.753	1
SELPLG	ALG12	0.753	1
MAPK6	C14orf184	0.753	1
FAM9A	Amp_11p15.5	0.753	1
MVK	8q-Amp	0.753	1
ALG12	C2orf29	0.753	1
ALG12	Del_16p13.3	0.753	1
GRB2	Del_1p13.2	0.753	1
PRRG1	8q-Amp	0.753	1
SLC26A8	C14orf184	0.753	1
FKBP9	C14orf184	0.753	1
C14orf184	Del_16p13.3	0.753	1
CDK12	Del_15q15.2	0.753	1
8q-Amp	Amp_10q22.3	0.753	1
Amp_8p11.21	Amp_15q26.1	0.753	1
Amp_11p15.5	Del_2q22.1	0.753	1
SMAD2	PLAGL2	0.754	1
SMAD2	Del_2p12	0.754	1
GGT1	ALPK2	0.754	1
PRKDC	PLEKHF2	0.754	1
CHUK	ATXN3L	0.754	1
CHUK	Amp_19q12	0.754	1
CHUK	Del_3q26.31	0.754	1
C2orf29	Del_3p14.2	0.754	1
SLC26A8	Del_3p14.2	0.754	1
FKBP9	Del_3p14.2	0.754	1
NEXN	Amp_6p21.1	0.754	1
CTNNB1	7p-Amp	0.754	1
12q-Amp	21q-Del	0.754	1
8q-Amp	4p-Del	0.754	1
9p-Amp	Del_5q21.2	0.754	1
5q-Del	Amp_6p21.1	0.754	1
5q-Del	Del_3p26.3	0.754	1
Amp_2q33.1	Del_3p26.3	0.754	1
Del_2p12	Del_12p13.1	0.754	1
RPTN	Amp_16p11.2	0.755	1
THOC7	18p-Del	0.755	1
RBPJ	Amp_16p11.2	0.755	1
RBBP7	Amp_16p11.2	0.755	1
RB1	12p-Amp	0.755	1
GMNN	20p-Amp	0.755	1
GMNN	Del_8p23.2	0.755	1
Amp_16p11.2	Del_8q11.1	0.755	1
FAM9A	PLEKHF2	0.756	1
FAM9A	VCX2	0.756	1
EGR1	THOC7	0.756	1
EGR1	GRB2	0.756	1
EGR1	RSPH3	0.756	1
EGR1	Del_2q22.1	0.756	1
THOC7	PLEKHF2	0.756	1
THOC7	VCX2	0.756	1
ST3GAL6	Del_2q22.1	0.756	1
PLEKHF2	GRB2	0.756	1
NLRC4	8p-Del	0.756	1
PIK3R1	Del_4q35.1	0.756	1
RSPH3	VCX2	0.756	1
VCX2	Del_2q22.1	0.756	1
Del_1p13.2	Del_10q23.31	0.756	1
APC	IDH1	0.757	1
APC	17q-Amp	0.757	1
TXNDC2	C2orf29	0.757	1
TXNDC2	ALDH1A3	0.757	1
TXNDC2	13q-Amp	0.757	1
TXNDC2	Del_16p13.3	0.757	1
FMN2	Del_5q22.2	0.757	1
SELPLG	Del_6p25.3	0.757	1
OR4D10	Del_1p36.11	0.757	1
C2orf29	TOP2B	0.757	1
C2orf29	Del_6p25.3	0.757	1
C2orf29	Del_6q26	0.757	1
C2orf29	Del_19p13.3	0.757	1
SLC26A8	Del_6p25.3	0.757	1
ALDH1A3	Del_6p25.3	0.757	1
ALDH1A3	Del_6q26	0.757	1
SLC12A6	Amp_12p13.33	0.757	1
12q-Amp	Amp_13q22.1	0.757	1
9p-Amp	Amp_13q22.1	0.757	1
ARID1A	Del_4q35.1	0.758	1
IQCD	Del_21q21.1	0.758	1
PIK3R1	Del_5q23.3	0.758	1
IFT57	Del_21q21.1	0.758	1
SMAD4	Amp_1q31.1	0.758	1
8p-Amp	Del_18q22.1	0.758	1
5q-Del	Amp_20p11.21	0.758	1
Amp_1q31.1	Del_3p26.3	0.758	1
FAM123B	Del_15q21.1	0.759	1
FAM123B	Del_21q21.1	0.759	1
GGT1	RHOA	0.759	1
GGT1	IQCD	0.759	1
GGT1	IFT57	0.759	1
GGT1	ZNF486	0.759	1
RHOA	TPRKB	0.759	1
RHOA	HIST1H1T	0.759	1
TPRKB	IFT57	0.759	1
ZBTB20	8q-Amp	0.759	1
IFT57	HIST1H1T	0.759	1
IDH1	7p-Amp	0.759	1
7q-Amp	Amp_10q22.3	0.759	1
8p-Del	Del_3p14.2	0.759	1
TXNDC2	CREBBP	0.76	1
CDK12	Del_21q21.1	0.76	1
8p-Amp	Amp_13q12.13	0.76	1
18q-Del	Amp_15q26.1	0.76	1
20p-Del	Amp_5p12	0.76	1
Amp_6p21.1	Del_21q11.2	0.76	1
Amp_10q22.3	Del_8p22	0.76	1
FAM123B	Amp_10q22.3	0.761	1
SOX9	THOC7	0.761	1
FAM9A	Del_5q23.3	0.761	1
THOC7	Del_5q23.3	0.761	1
GRB2	Del_5q23.3	0.761	1
RSPH3	Del_5q23.3	0.761	1
VCX2	Del_22q13.32	0.761	1
13q-Amp	Del_16p13.3	0.761	1
Amp_6p21.1	Del_5q21.2	0.761	1
Amp_12p13.33	Amp_17q12	0.761	1
Del_3q26.31	Del_5q22.2	0.761	1
BCOR	P2RY13	0.762	1
BCOR	DCLK2	0.762	1
BCOR	GPATCH8	0.762	1
BCOR	16q-Amp	0.762	1
STARD3NL	Del_17q24.3	0.762	1
OR4D10	2p-Amp	0.762	1
OR4D10	2q-Amp	0.762	1
OR4D10	6p-Amp	0.762	1
OR4D10	Amp_15q26.1	0.762	1
NR1H3	DIP2B	0.762	1
NR1H3	LARP4B	0.762	1
NR1H3	Del_17q24.3	0.762	1
DIP2B	PCBP1	0.762	1
DIP2B	GPATCH8	0.762	1
DIP2B	16q-Amp	0.762	1
PCBP1	Del_17q24.3	0.762	1
MPHOSPH10	Amp_5p12	0.762	1
DDX26B	2p-Amp	0.762	1
DDX26B	2q-Amp	0.762	1
DDX26B	6p-Amp	0.762	1
DDX26B	Amp_15q26.1	0.762	1
LARP4B	16q-Amp	0.762	1
BIRC3	Del_17q24.3	0.762	1
GMNN	Amp_8q24.21	0.762	1
20p-Amp	Del_17q24.3	0.762	1
APC	Del_15q11.2	0.763	1
APC	Del_21q11.2	0.763	1
OR4D10	Del_16q23.1	0.763	1
Amp_1q31.1	Del_8p22	0.763	1
Amp_5p12	Del_4q22.1	0.763	1
Amp_12p13.33	Del_18q21.2	0.763	1
Amp_20q13.12	Del_10q25.2	0.763	1
ZFP36L2	8p-Del	0.764	1
RPTN	8p-Del	0.764	1
FBXW7	DDX26B	0.764	1
ZBTB20	Del_2p12	0.764	1
PLAGL2	MAP4K3	0.764	1
PLAGL2	17q-Amp	0.764	1
DIP2B	22q-Del	0.764	1
PRRG1	CDK12	0.764	1
C14orf184	7p-Amp	0.764	1
MAP4K3	Del_2p12	0.764	1
IDH1	Del_2p12	0.764	1
12q-Amp	Amp_13q12.2	0.764	1
APC	FAM123B	0.765	1
APC	MLH1	0.765	1
TP53	Amp_10q22.3	0.765	1
WNT1	1p-Del	0.765	1
WNT1	Del_21q21.1	0.765	1
RHOA	Amp_12p13.33	0.765	1
MGA	Del_16p13.3	0.765	1
MVK	PTGDR	0.765	1
MVK	Del_7q31.1	0.765	1
IQCD	Amp_12p13.33	0.765	1
ALG12	RLIM	0.765	1
ALG12	1p-Del	0.765	1
PRRG1	Del_7q31.1	0.765	1
RLIM	C14orf184	0.765	1
MPHOSPH10	C14orf184	0.765	1
C2orf29	Del_5q12.1	0.765	1
C14orf184	13q-Amp	0.765	1
C14orf184	1p-Del	0.765	1
PRPS1	Amp_10q22.3	0.765	1
PTGDR	Amp_10q22.3	0.765	1
ATM	Amp_1q31.1	0.765	1
GMNN	Amp_5p12	0.765	1
TP53	ASXL1	0.766	1
TXNDC2	Amp_13q22.1	0.766	1
RBBP7	8p-Amp	0.766	1
GMPS	8p-Amp	0.766	1
16p-Amp	8p-Amp	0.766	1
8p-Amp	Del_8q11.1	0.766	1
Amp_13q22.1	Del_6q26	0.766	1
CRIPAK	KDM6A	0.767	1
MGA	Del_16q23.1	0.767	1
PLEKHF2	Del_1p33	0.767	1
VCX2	Del_1p33	0.767	1
SMAD4	Del_5q22.2	0.767	1
ATM	6p-Amp	0.767	1
20q-Amp	Del_2q22.1	0.767	1
Del_5q21.2	Del_14q11.2	0.767	1
ZFP36L2	BCL9	0.768	1
BCOR	Amp_16p11.2	0.768	1
RPTN	BCORL1	0.768	1
BCL9	RBPJ	0.768	1
VCX2	Del_15q22.33	0.768	1
BCORL1	16p-Amp	0.768	1
8p-Amp	18q-Del	0.768	1
Amp_17q12	Del_3p14.2	0.768	1
CDH1	SLC26A8	0.769	1
NF1	Amp_16p11.2	0.769	1
ZBTB20	IDH1	0.769	1
SETD2	1p-Del	0.769	1
IDH1	17q-Amp	0.769	1
CTNNB1	9p-Amp	0.769	1
APC	ACVR1B	0.77	1
APC	4p-Del	0.77	1
CRIPAK	Amp_20p12.1	0.77	1
BCOR	8p-Del	0.77	1
SMAD2	Amp_2q33.1	0.77	1
SMAD2	Amp_19q12	0.77	1
STARD3NL	Del_4p16.1	0.77	1
ATXN3L	Del_12p13.1	0.77	1
NEXN	Del_12p13.1	0.77	1
BIRC3	Del_4p16.1	0.77	1
HIST1H1T	Del_3p14.2	0.77	1
16q-Amp	22q-Del	0.77	1
8p-Amp	Amp_5p12	0.77	1
8q-Amp	Del_10q23.31	0.77	1
RHOA	CTNNB1	0.771	1
EGR1	PTCH1	0.771	1
CHUK	Del_10q25.2	0.771	1
BCL9	12q-Amp	0.771	1
IQCD	CTNNB1	0.771	1
ASXL1	Del_5q21.2	0.771	1
ALG12	Amp_12p13.33	0.771	1
ROS1	6p-Amp	0.771	1
VCX2	RB1	0.771	1
SLC12A6	12q-Amp	0.771	1
ZNF486	CTNNB1	0.771	1
8p-Amp	Amp_11p15.5	0.771	1
21q-Del	Amp_17q12	0.771	1
Amp_6p21.1	Del_10q25.2	0.771	1
Amp_17q12	Amp_20p12.1	0.771	1
Amp_20q11.21	Del_10q25.2	0.771	1
TP53	Del_6p25.3	0.772	1
SELPLG	CHUK	0.772	1
NF1	Del_16p13.3	0.772	1
CHUK	7q-Amp	0.772	1
CHUK	Del_16p13.3	0.772	1
C11orf30	C2orf29	0.772	1
C2orf29	15q-Del	0.772	1
C2orf29	Amp_6p21.1	0.772	1
SMAD4	Amp_8p11.23	0.772	1
SLC26A8	Amp_12p13.33	0.772	1
ALDH1A3	Amp_6p21.1	0.772	1
7q-Amp	Del_3p26.3	0.772	1
15q-Del	Del_16p13.3	0.772	1
Amp_13q12.2	Del_6q26	0.772	1
STARD3NL	Amp_8p11.23	0.773	1
P2RY13	Amp_8p11.23	0.773	1
GPATCH8	Amp_8p11.23	0.773	1
GMNN	7q-Amp	0.773	1
20p-Amp	Del_21q21.1	0.773	1
CRIPAK	SOX9	0.774	1
CRIPAK	P2RY13	0.774	1
CRIPAK	PCBP1	0.774	1
CRIPAK	DCLK2	0.774	1
CRIPAK	Del_5q23.3	0.774	1
BCOR	NF2	0.774	1
FAM9A	THOC7	0.774	1
FAM9A	Del_2q22.1	0.774	1
THOC7	RSPH3	0.774	1
THOC7	Del_2q22.1	0.774	1
ATXN3L	Del_2p12	0.774	1
GRB2	Del_2q22.1	0.774	1
PLAGL2	L1TD1	0.774	1
PLAGL2	NEXN	0.774	1
PLAGL2	5q-Del	0.774	1
PLAGL2	Amp_2q33.1	0.774	1
PLAGL2	Amp_19q12	0.774	1
PLAGL2	Del_3q26.31	0.774	1
DIP2B	Del_4q35.1	0.774	1
L1TD1	Del_2p12	0.774	1
NEXN	Del_2p12	0.774	1
CREBBP	12p-Amp	0.774	1
GMNN	Del_6p25.3	0.774	1
GMNN	Del_6q26	0.774	1
GMNN	Del_19p13.3	0.774	1
5q-Del	Del_2p12	0.774	1
Del_2p12	Del_3q26.31	0.774	1
FAM123B	Amp_12p13.33	0.775	1
MLH1	Amp_12p13.33	0.775	1
GGT1	EGR1	0.775	1
GGT1	ST3GAL6	0.775	1
GGT1	PLEKHF2	0.775	1
STARD3NL	2p-Amp	0.775	1
STARD3NL	2q-Amp	0.775	1
STARD3NL	6p-Amp	0.775	1
STARD3NL	Amp_15q26.1	0.775	1
NF2	VCX2	0.775	1
EGR1	TPRKB	0.775	1
TPRKB	PLEKHF2	0.775	1
TPRKB	VCX2	0.775	1
MVK	12q-Amp	0.775	1
MVK	9p-Amp	0.775	1
P2RY13	2p-Amp	0.775	1
P2RY13	2q-Amp	0.775	1
P2RY13	6p-Amp	0.775	1
P2RY13	Amp_15q26.1	0.775	1
PLEKHF2	Del_4q35.1	0.775	1
NR1H3	2p-Amp	0.775	1
NR1H3	2q-Amp	0.775	1
NR1H3	6p-Amp	0.775	1
NR1H3	Amp_15q26.1	0.775	1
PRRG1	9p-Amp	0.775	1
PCBP1	2p-Amp	0.775	1
PCBP1	2q-Amp	0.775	1
PCBP1	6p-Amp	0.775	1
PCBP1	Amp_15q26.1	0.775	1
VCX2	HIST1H1T	0.775	1
DCLK2	2p-Amp	0.775	1
DCLK2	2q-Amp	0.775	1
DCLK2	6p-Amp	0.775	1
DCLK2	Amp_15q26.1	0.775	1
FYN	2p-Amp	0.775	1
FYN	2q-Amp	0.775	1
FYN	6p-Amp	0.775	1
FYN	Amp_15q26.1	0.775	1
GPATCH8	2p-Amp	0.775	1
GPATCH8	2q-Amp	0.775	1
GPATCH8	6p-Amp	0.775	1
GPATCH8	Amp_15q26.1	0.775	1
BIRC3	2p-Amp	0.775	1
BIRC3	2q-Amp	0.775	1
BIRC3	6p-Amp	0.775	1
BIRC3	Amp_15q26.1	0.775	1
12q-Amp	Amp_10q22.3	0.775	1
16q-Amp	2p-Amp	0.775	1
16q-Amp	2q-Amp	0.775	1
Amp_10q22.3	Del_10q21.1	0.775	1
TXNDC2	RLIM	0.776	1
SELPLG	Amp_11p15.5	0.776	1
SELPLG	Del_1p13.2	0.776	1
OR4D10	Amp_16p11.2	0.776	1
MAPK6	12p-Amp	0.776	1
EGR1	ERBB2	0.776	1
ST3GAL6	Amp_1q31.1	0.776	1
PTCH1	5q-Del	0.776	1
DIP2B	21q-Del	0.776	1
RLIM	Del_19p13.3	0.776	1
MPHOSPH10	Del_6p25.3	0.776	1
C2orf29	Amp_11p15.5	0.776	1
C2orf29	Del_1p13.2	0.776	1
SLC26A8	12p-Amp	0.776	1
FAM123B	Del_5q23.3	0.777	1
ZFP36L2	PRKDC	0.777	1
B2M	WNT1	0.777	1
B2M	ALG12	0.777	1
B2M	C14orf184	0.777	1
WNT1	RPTN	0.777	1
WNT1	GMPS	0.777	1
WNT1	16p-Amp	0.777	1
WNT1	Del_8q11.1	0.777	1
RPTN	C14orf184	0.777	1
THOC7	Del_17p12	0.777	1
ALG12	RBPJ	0.777	1
ALG12	GMPS	0.777	1
ALG12	16p-Amp	0.777	1
PTCH1	2q-Amp	0.777	1
C11orf30	PTEN	0.777	1
ROS1	Del_3p14.2	0.777	1
RBPJ	C14orf184	0.777	1
RBBP7	C14orf184	0.777	1
RB1	6p-Amp	0.777	1
C14orf184	HLA-A	0.777	1
C14orf184	Del_8q11.1	0.777	1
PRPS1	8p-Amp	0.777	1
CTNNB1	7q-Amp	0.777	1
6p-Amp	22q-Del	0.777	1
6p-Amp	Del_4p16.1	0.777	1
8p-Amp	Del_18q12.2	0.777	1
Amp_15q26.1	Del_4p16.1	0.777	1
CRIPAK	Del_22q13.32	0.778	1
ZFP36L2	7p-Amp	0.778	1
GGT1	Del_5q12.1	0.778	1
SELPLG	FBXW7	0.778	1
FBXW7	SLC26A8	0.778	1
P2RY13	Del_5q21.2	0.778	1
FYN	21q-Del	0.778	1
SLC12A6	Del_1p36.11	0.778	1
BIRC3	Del_5q21.2	0.778	1
8p-Amp	20p-Del	0.778	1
TXNDC2	20p-Del	0.779	1
CDH1	Amp_10q22.3	0.779	1
THOC7	Del_10q23.31	0.779	1
CHUK	Del_22q13.32	0.779	1
ERBB2	Del_12p13.1	0.779	1
IFT57	20p-Del	0.779	1
MPHOSPH10	Del_3p14.2	0.779	1
13q-Amp	9p-Amp	0.779	1
7p-Amp	Del_10q25.2	0.779	1
Amp_1q31.1	Del_12p13.1	0.779	1
Amp_17q24.1	Del_12p13.1	0.779	1
Amp_20q12	Del_7q31.1	0.779	1
FAM123B	Amp_19q12	0.78	1
ACVR1B	12p-Amp	0.78	1
MLH1	L1TD1	0.78	1
MLH1	Amp_19q12	0.78	1
RHOA	PTGDR	0.78	1
IQCD	PRPS1	0.78	1
IQCD	Del_5q22.2	0.78	1
IQCD	Del_7q31.1	0.78	1
IFT57	PRPS1	0.78	1
IFT57	PTGDR	0.78	1
IFT57	Del_7q31.1	0.78	1
SETD2	Amp_12p13.33	0.78	1
PRPS1	ZNF486	0.78	1
Amp_20q12	Del_10q23.31	0.78	1
APC	P2RY13	0.781	1
TP53	FMN2	0.781	1
FMN2	MAPK6	0.781	1
FBXW7	ASXL1	0.781	1
20p-Amp	8p-Del	0.781	1
7q-Amp	4p-Del	0.781	1
8p-Amp	Del_1p36.11	0.781	1
Amp_13q12.13	Del_5q12.1	0.781	1
SOX9	PTCH1	0.782	1
ZFP36L2	Amp_5p12	0.782	1
THOC7	14q-Del	0.782	1
ALG12	Del_5q22.2	0.782	1
C11orf30	GMNN	0.782	1
RBPJ	Amp_5p12	0.782	1
C14orf184	Del_5q22.2	0.782	1
HLA-A	Amp_5p12	0.782	1
GMNN	Amp_6p21.1	0.782	1
GMNN	Del_3p26.3	0.782	1
7p-Amp	Del_6q26	0.782	1
7p-Amp	Del_19p13.3	0.782	1
Amp_5p12	Del_8q11.1	0.782	1
Amp_8p11.21	Del_1p36.11	0.782	1
APC	Del_10q25.2	0.783	1
ACVR1B	Del_16q23.1	0.783	1
ATXN3L	Del_14q11.2	0.783	1
ATXN3L	Del_15q21.1	0.783	1
PLAGL2	Del_21q11.2	0.783	1
NEXN	Del_14q11.2	0.783	1
7q-Amp	1p-Del	0.783	1
7q-Amp	4q-Del	0.783	1
7q-Amp	Del_1p13.2	0.783	1
Amp_2q33.1	Del_15q21.1	0.783	1
Amp_13q12.13	Del_5q22.2	0.783	1
ERBB2	ROS1	0.784	1
RBPJ	Amp_8q24.21	0.784	1
PRPS1	Del_8p22	0.784	1
HIST1H1T	Del_14q11.2	0.784	1
18q-Del	Amp_2q33.1	0.784	1
Amp_8q24.21	Del_8q11.1	0.784	1
Amp_15q26.1	Del_5q21.2	0.784	1
Amp_17q12	Del_5q12.1	0.784	1
Del_7q31.1	Del_8p22	0.784	1
ARID1A	SELPLG	0.785	1
ZFP36L2	Del_22q13.32	0.785	1
SELPLG	PLAGL2	0.785	1
SELPLG	Del_2p12	0.785	1
SELPLG	Del_15q11.2	0.785	1
MAPK6	Del_2p12	0.785	1
NF1	Amp_8p11.21	0.785	1
ATXN3L	IDH1	0.785	1
ASXL1	GMPS	0.785	1
PLAGL2	C2orf29	0.785	1
PLAGL2	FKBP9	0.785	1
PLAGL2	Del_16p13.3	0.785	1
C2orf29	Del_2p12	0.785	1
SMAD4	22q-Del	0.785	1
SLC26A8	Del_2p12	0.785	1
FKBP9	Del_2p12	0.785	1
ALDH1A3	Del_2p12	0.785	1
MAP4K3	Amp_2q33.1	0.785	1
MAP4K3	Del_3q26.31	0.785	1
SLC12A6	Del_17q24.3	0.785	1
16p-Amp	Del_22q13.32	0.785	1
20p-Amp	Del_1p36.11	0.785	1
20p-Amp	Del_5q21.2	0.785	1
Amp_17q12	Del_8q11.1	0.785	1
SOX9	FKBP9	0.786	1
ACVR1B	P2RY13	0.786	1
ACVR1B	DCLK2	0.786	1
ACVR1B	GPATCH8	0.786	1
GGT1	Del_1p13.2	0.786	1
STARD3NL	KDM6A	0.786	1
TPRKB	12p-Amp	0.786	1
PCBP1	KDM6A	0.786	1
VCX2	BMPR2	0.786	1
DCLK2	KDM6A	0.786	1
LARP4B	Amp_10q22.3	0.786	1
GPATCH8	Del_16q23.1	0.786	1
BIRC3	Del_16q23.1	0.786	1
HIST1H1T	4q-Del	0.786	1
HIST1H1T	Amp_11p15.5	0.786	1
Amp_10q22.3	Del_17q24.3	0.786	1
Amp_19q12	Del_10q23.31	0.786	1
Del_5q21.2	Del_12p13.1	0.786	1
SMAD2	C2orf29	0.787	1
SELPLG	Del_12p13.1	0.787	1
MGA	Amp_16p11.2	0.787	1
C11orf30	SMAD4	0.787	1
VCX2	Amp_20q12	0.787	1
IDH1	Del_1p33	0.787	1
8p-Del	Amp_8p11.23	0.787	1
Amp_11p15.5	Del_4q35.1	0.787	1
CRIPAK	CREBBP	0.788	1
TP53	RSPH3	0.788	1
WNT1	OR4D10	0.788	1
OR4D10	ALG12	0.788	1
OR4D10	C14orf184	0.788	1
BCL9	SMAD4	0.788	1
VCX2	Del_4q22.1	0.788	1
DDX26B	C14orf184	0.788	1
Amp_5p12	Del_10q21.1	0.788	1
Amp_6p21.1	Del_15q22.33	0.788	1
THOC7	NF1	0.789	1
MGA	RLIM	0.789	1
MVK	2p-Amp	0.789	1
MVK	2q-Amp	0.789	1
MVK	6p-Amp	0.789	1
MVK	Amp_15q26.1	0.789	1
IQCD	CDK12	0.789	1
ASXL1	Del_5q22.2	0.789	1
PRRG1	2p-Amp	0.789	1
PRRG1	2q-Amp	0.789	1
PRRG1	Amp_15q26.1	0.789	1
RLIM	Del_5q12.1	0.789	1
2q-Amp	Amp_10q22.3	0.789	1
Amp_10q22.3	Amp_15q26.1	0.789	1
7p-Amp	4q-Del	0.79	1
8q-Amp	Amp_11p15.5	0.79	1
SMAD2	BMPR2	0.791	1
SMAD2	GMNN	0.791	1
SMAD2	Del_10q25.2	0.791	1
ATXN3L	Del_15q15.2	0.791	1
ERBB2	CDK12	0.791	1
ASXL1	PRPS1	0.791	1
ASXL1	Del_7q31.1	0.791	1
PIK3R1	12q-Amp	0.791	1
PRPS1	Amp_17q12	0.791	1
Amp_2q33.1	Del_15q15.2	0.791	1
Amp_17q12	Del_7q31.1	0.791	1
GGT1	FAM9A	0.792	1
GGT1	RSPH3	0.792	1
GGT1	Del_2q22.1	0.792	1
FAM9A	HIST1H1T	0.792	1
THOC7	HIST1H1T	0.792	1
TPRKB	Del_2q22.1	0.792	1
ERBB2	Del_5q12.1	0.792	1
RSPH3	HIST1H1T	0.792	1
RBPJ	CREBBP	0.792	1
PTGDR	13q-Amp	0.792	1
HIST1H1T	Del_2q22.1	0.792	1
16p-Amp	Del_15q22.33	0.792	1
8p-Amp	17p-Del	0.792	1
FAM123B	C14orf184	0.793	1
SOX9	KDM6A	0.793	1
SOX9	Del_16q23.1	0.793	1
ALPK2	Amp_5p12	0.793	1
CTNNB1	Del_3p14.2	0.793	1
Amp_5p12	Amp_17q12	0.793	1
Del_5q23.3	Del_16q23.1	0.793	1
TP53	9p-Amp	0.794	1
SOX9	GGT1	0.794	1
SOX9	TPRKB	0.794	1
SOX9	HIST1H1T	0.794	1
THOC7	Amp_8p11.21	0.794	1
GRB2	Amp_8p11.21	0.794	1
PIK3R1	Del_10q23.31	0.794	1
SMAD4	BMPR2	0.794	1
Del_3p14.2	Del_15q11.2	0.794	1
APC	Amp_15q26.1	0.795	1
ZFP36L2	SETD2	0.795	1
ZFP36L2	Del_6p25.3	0.795	1
ZFP36L2	Del_6q26	0.795	1
ZFP36L2	Del_19p13.3	0.795	1
TXNDC2	RBPJ	0.795	1
TXNDC2	RBBP7	0.795	1
TXNDC2	16p-Amp	0.795	1
EGR1	PTGDR	0.795	1
EGR1	Del_7q31.1	0.795	1
EGR1	Del_21q21.1	0.795	1
RPTN	TOP2B	0.795	1
THOC7	Del_18p11.31	0.795	1
ST3GAL6	Del_7q31.1	0.795	1
PLEKHF2	PTGDR	0.795	1
PLEKHF2	Del_7q31.1	0.795	1
PLEKHF2	Del_21q21.1	0.795	1
PLAGL2	1p-Del	0.795	1
RLIM	Del_2p12	0.795	1
MPHOSPH10	Del_2p12	0.795	1
VCX2	PRPS1	0.795	1
VCX2	Del_7q31.1	0.795	1
RBBP7	Del_6p25.3	0.795	1
RBBP7	Del_6q26	0.795	1
TOP2B	16p-Amp	0.795	1
BCORL1	Del_3p14.2	0.795	1
16p-Amp	Del_6q26	0.795	1
1p-Del	Del_2p12	0.795	1
Del_3p14.2	Del_10q25.2	0.795	1
Del_6p25.3	Del_8q11.1	0.795	1
APC	Del_15q21.1	0.796	1
GGT1	Del_1p36.11	0.796	1
GRB2	Del_1p33	0.796	1
ROS1	Del_16q23.1	0.796	1
8q-Amp	Del_15q22.33	0.796	1
Amp_13q22.1	Del_16p13.3	0.796	1
Del_1p33	Del_2q22.1	0.796	1
CRIPAK	PRRG1	0.797	1
CRIPAK	Amp_10q22.3	0.797	1
TP53	RLIM	0.797	1
BCOR	CTNNB1	0.797	1
STARD3NL	Amp_16p11.2	0.797	1
ALG12	Amp_8q24.21	0.797	1
DCLK2	Amp_16p11.2	0.797	1
PRPS1	Amp_20p12.1	0.797	1
PTGDR	Amp_20p12.1	0.797	1
BIRC3	Amp_16p11.2	0.797	1
20p-Del	Amp_6p21.1	0.797	1
20p-Del	Del_3p26.3	0.797	1
ASXL1	Del_15q21.1	0.798	1
Del_6p25.3	Del_21q21.1	0.798	1
MLH1	SLC12A6	0.799	1
RHOA	12q-Amp	0.799	1
RHOA	Del_10q21.1	0.799	1
THOC7	SMAD4	0.799	1
ZBTB20	ERBB2	0.799	1
IQCD	12q-Amp	0.799	1
ZNF486	12q-Amp	0.799	1
ZNF486	9p-Amp	0.799	1
17q-Amp	Amp_1q31.1	0.799	1
17p-Del	Amp_20p12.1	0.799	1
CRIPAK	NLRC4	0.8	1
ZFP36L2	Del_4q35.1	0.8	1
CDH1	Del_7q31.1	0.8	1
WNT1	STARD3NL	0.8	1
WNT1	PCBP1	0.8	1
WNT1	DCLK2	0.8	1
WNT1	FYN	0.8	1
WNT1	BIRC3	0.8	1
WNT1	16q-Amp	0.8	1
STARD3NL	ALG12	0.8	1
STARD3NL	C14orf184	0.8	1
NF2	Del_4q35.1	0.8	1
ATXN3L	7p-Amp	0.8	1
P2RY13	C14orf184	0.8	1
NR1H3	C14orf184	0.8	1
ASXL1	Amp_11p15.5	0.8	1
ALG12	PCBP1	0.8	1
ALG12	DCLK2	0.8	1
ALG12	FYN	0.8	1
ALG12	BIRC3	0.8	1
ALG12	16q-Amp	0.8	1
PCBP1	C14orf184	0.8	1
RLIM	12p-Amp	0.8	1
DCLK2	C14orf184	0.8	1
C14orf184	FYN	0.8	1
C14orf184	GPATCH8	0.8	1
C14orf184	BIRC3	0.8	1
ATM	IDH1	0.8	1
IDH1	GMNN	0.8	1
GMNN	17q-Amp	0.8	1
12p-Amp	Amp_17q12	0.8	1
Amp_13q12.2	Del_3p14.2	0.8	1
Amp_17q12	Del_1p13.2	0.8	1
ATXN3L	5q-Del	0.801	1
RSPH3	Del_22q13.32	0.801	1
NEXN	5q-Del	0.801	1
7p-Amp	Del_21q21.1	0.801	1
8q-Amp	Del_15q11.2	0.801	1
5q-Del	Del_3q26.31	0.801	1
Amp_2q33.1	Del_3q26.31	0.801	1
Amp_10q22.3	Del_4p16.1	0.801	1
Amp_20q11.21	Del_7q31.1	0.801	1
BCOR	Amp_5p12	0.802	1
SELPLG	MAP4K3	0.802	1
OR4D10	4p-Del	0.802	1
MAPK6	IDH1	0.802	1
RHOA	2p-Amp	0.802	1
RHOA	2q-Amp	0.802	1
RHOA	6p-Amp	0.802	1
RHOA	Amp_15q26.1	0.802	1
ZBTB20	C2orf29	0.802	1
ST3GAL6	Amp_12p13.33	0.802	1
IQCD	2p-Amp	0.802	1
IQCD	2q-Amp	0.802	1
IQCD	6p-Amp	0.802	1
PLEKHF2	Amp_12p13.33	0.802	1
IFT57	2q-Amp	0.802	1
IFT57	Amp_15q26.1	0.802	1
MPHOSPH10	Amp_12p13.33	0.802	1
VCX2	Amp_12p13.33	0.802	1
C2orf29	MAP4K3	0.802	1
SLC26A8	IDH1	0.802	1
SLC26A8	17q-Amp	0.802	1
FKBP9	IDH1	0.802	1
ALDH1A3	MAP4K3	0.802	1
ZNF486	2p-Amp	0.802	1
ZNF486	2q-Amp	0.802	1
ZNF486	6p-Amp	0.802	1
ZNF486	Amp_15q26.1	0.802	1
CTNNB1	Del_5q21.2	0.802	1
CTNNB1	Del_10q23.31	0.802	1
15q-Del	1p-Del	0.802	1
Amp_20q11.21	Del_3q26.31	0.802	1
Del_16q23.1	Del_22q13.32	0.802	1
RNF43	TXNDC2	0.803	1
TXNDC2	4p-Del	0.803	1
FBXW7	PLAGL2	0.803	1
FBXW7	Del_2p12	0.803	1
20p-Amp	15q-Del	0.803	1
20p-Amp	Del_6p25.3	0.803	1
20p-Amp	Del_21q11.2	0.803	1
7q-Amp	Del_21q11.2	0.803	1
Del_6p25.3	Del_8p23.2	0.803	1
ZFP36L2	Del_3p14.2	0.804	1
B2M	Del_3p14.2	0.804	1
SMAD2	RLIM	0.804	1
SMAD2	MPHOSPH10	0.804	1
RPTN	Del_3p14.2	0.804	1
NF1	12p-Amp	0.804	1
PCBP1	PIK3R1	0.804	1
HLA-A	Del_3p14.2	0.804	1
1p-Del	Del_12p13.1	0.804	1
Amp_20p11.21	Del_8q11.1	0.804	1
ZFP36L2	Del_2p12	0.805	1
B2M	PLAGL2	0.805	1
B2M	Del_2p12	0.805	1
TXNDC2	9p-Amp	0.805	1
FAM9A	ERBB2	0.805	1
RPTN	Del_2p12	0.805	1
THOC7	Amp_1q31.1	0.805	1
ERBB2	GRB2	0.805	1
PLAGL2	RBBP7	0.805	1
PLAGL2	GMPS	0.805	1
PLAGL2	16p-Amp	0.805	1
PLAGL2	Del_8q11.1	0.805	1
VCX2	Amp_13q12.13	0.805	1
RBPJ	Del_2p12	0.805	1
RBBP7	Del_2p12	0.805	1
HLA-A	Del_2p12	0.805	1
GMPS	Del_2p12	0.805	1
16p-Amp	Del_2p12	0.805	1
Amp_1q31.1	Del_2q22.1	0.805	1
Amp_12p13.33	Del_21q21.1	0.805	1
RNF43	SMAD4	0.806	1
FAM123B	Del_5q22.2	0.806	1
NF2	Del_5q23.3	0.806	1
NF1	Amp_8q24.21	0.806	1
FBXW7	VCX2	0.806	1
DIP2B	Del_21q21.1	0.806	1
GMNN	Amp_8p11.23	0.806	1
12p-Amp	Amp_17q24.1	0.806	1
4q-Del	Amp_1q31.1	0.806	1
Amp_1q31.1	Del_1p13.2	0.806	1
FAM123B	SELPLG	0.807	1
FAM123B	Del_16p13.3	0.807	1
MLH1	ALDH1A3	0.807	1
THOC7	CREBBP	0.807	1
SMAD4	Del_22q13.32	0.807	1
ALDH1A3	Amp_8p11.23	0.807	1
12q-Amp	Amp_17q24.1	0.807	1
8p-Amp	Del_17p12	0.807	1
9p-Amp	Amp_1q31.1	0.807	1
22q-Del	Del_16q23.1	0.807	1
Del_2q22.1	Del_15q22.33	0.807	1
ZFP36L2	CHUK	0.808	1
B2M	Del_3p26.3	0.808	1
TXNDC2	Amp_8p11.23	0.808	1
TXNDC2	Amp_12p13.33	0.808	1
ACVR1B	PRRG1	0.808	1
ACVR1B	Amp_10q22.3	0.808	1
RPTN	C11orf30	0.808	1
RPTN	Del_3p26.3	0.808	1
CHUK	RBPJ	0.808	1
CHUK	GMPS	0.808	1
ATXN3L	GMNN	0.808	1
ATXN3L	Del_1p33	0.808	1
MVK	Del_16q23.1	0.808	1
RBBP7	Del_3p26.3	0.808	1
L1TD1	Del_1p33	0.808	1
GMNN	5q-Del	0.808	1
GMNN	Amp_2q33.1	0.808	1
GMNN	Amp_19q12	0.808	1
GMNN	Del_3q26.31	0.808	1
Amp_10q22.3	Del_16q23.1	0.808	1
Amp_12p13.33	Del_19p13.3	0.808	1
Del_3p26.3	Del_8q11.1	0.808	1
GGT1	HIST1H1T	0.809	1
TPRKB	HIST1H1T	0.809	1
MVK	21q-Del	0.809	1
NR1H3	SLC12A6	0.809	1
NLRC4	PCBP1	0.809	1
PRRG1	Del_5q21.2	0.809	1
RLIM	Del_5q23.3	0.809	1
DCLK2	BCORL1	0.809	1
CDK12	4p-Del	0.809	1
21q-Del	Amp_1q31.1	0.809	1
21q-Del	Amp_17q24.1	0.809	1
8p-Del	Amp_11p15.5	0.809	1
FAM123B	Del_15q22.33	0.81	1
GGT1	Del_10q23.31	0.81	1
CHUK	CDK12	0.81	1
DIP2B	Del_1p33	0.81	1
SMAD4	7q-Amp	0.81	1
BCORL1	Amp_8p11.21	0.81	1
GMNN	Del_14q11.2	0.81	1
GMNN	Del_15q21.1	0.81	1
20q-Amp	Del_8q11.1	0.81	1
17p-Del	Amp_16p11.2	0.81	1
Amp_13q22.1	Del_2p12	0.81	1
FAM9A	PTGDR	0.811	1
THOC7	PRPS1	0.811	1
THOC7	Del_7q31.1	0.811	1
GRB2	PRPS1	0.811	1
GRB2	Del_7q31.1	0.811	1
PIK3R1	Del_17q24.3	0.811	1
RSPH3	PRPS1	0.811	1
RSPH3	PTGDR	0.811	1
RSPH3	Del_7q31.1	0.811	1
PRPS1	Del_2q22.1	0.811	1
PTGDR	Del_2q22.1	0.811	1
Amp_8p11.23	Del_5q22.2	0.811	1
Del_2q22.1	Del_7q31.1	0.811	1
APC	DDX26B	0.812	1
TP53	Amp_5p12	0.812	1
WNT1	Amp_10q22.3	0.812	1
SELPLG	Amp_8q24.21	0.812	1
ALG12	Amp_10q22.3	0.812	1
PRRG1	C14orf184	0.812	1
VCX2	Amp_20q11.21	0.812	1
PRPS1	Del_5q12.1	0.812	1
20p-Amp	Del_15q22.33	0.812	1
Del_5q12.1	Del_7q31.1	0.812	1
Del_15q22.33	Del_16q23.1	0.812	1
ARID1A	Amp_8p11.23	0.813	1
ZFP36L2	Del_5q12.1	0.813	1
SELPLG	RB1	0.813	1
NF2	GRB2	0.813	1
NF2	RSPH3	0.813	1
NF2	Del_2q22.1	0.813	1
RPTN	MGA	0.813	1
RPTN	Del_5q12.1	0.813	1
THOC7	BMPR2	0.813	1
THOC7	Del_10q25.2	0.813	1
P2RY13	PTCH1	0.813	1
PTCH1	16q-Amp	0.813	1
PTCH1	Del_16p13.3	0.813	1
RSPH3	Del_10q25.2	0.813	1
SMAD4	Del_5q21.2	0.813	1
RB1	DCLK2	0.813	1
16p-Amp	Del_5q12.1	0.813	1
Amp_13q12.2	Del_2p12	0.813	1
Amp_17q12	Del_6q26	0.813	1
ACVR1B	BCORL1	0.814	1
OR4D10	Del_19p13.3	0.814	1
VCX2	CDK12	0.814	1
DDX26B	Del_6p25.3	0.814	1
BCORL1	KDM6A	0.814	1
BCORL1	Del_16q23.1	0.814	1
SLC12A6	KDM6A	0.814	1
SLC12A6	Del_16q23.1	0.814	1
GMNN	Del_15q15.2	0.814	1
CTNNB1	2p-Amp	0.814	1
CTNNB1	6p-Amp	0.814	1
CTNNB1	Amp_15q26.1	0.814	1
8p-Amp	Amp_13q22.1	0.814	1
Amp_8q24.21	Amp_10q22.3	0.814	1
ARID1A	FBXW7	0.815	1
TP53	STARD3NL	0.815	1
TP53	GPATCH8	0.815	1
ALG12	ROS1	0.815	1
GRB2	13q-Amp	0.815	1
ROS1	C14orf184	0.815	1
12p-Amp	Amp_20q13.12	0.815	1
13q-Amp	Del_2q22.1	0.815	1
16p-Amp	Del_4q22.1	0.815	1
Amp_8q24.21	Del_19p13.3	0.815	1
APC	MGA	0.816	1
CRIPAK	Amp_5p12	0.816	1
SOX9	ALPK2	0.816	1
OR4D10	PLAGL2	0.816	1
OR4D10	Del_2p12	0.816	1
EGR1	2p-Amp	0.816	1
EGR1	2q-Amp	0.816	1
EGR1	6p-Amp	0.816	1
EGR1	Amp_15q26.1	0.816	1
ATXN3L	ROS1	0.816	1
ST3GAL6	2p-Amp	0.816	1
ST3GAL6	2q-Amp	0.816	1
ST3GAL6	6p-Amp	0.816	1
ST3GAL6	Amp_15q26.1	0.816	1
PLEKHF2	2p-Amp	0.816	1
PLEKHF2	2q-Amp	0.816	1
PLEKHF2	6p-Amp	0.816	1
PLEKHF2	Amp_15q26.1	0.816	1
VCX2	2p-Amp	0.816	1
VCX2	2q-Amp	0.816	1
VCX2	6p-Amp	0.816	1
VCX2	Amp_15q26.1	0.816	1
DDX26B	Del_2p12	0.816	1
Amp_13q12.2	Del_10q23.31	0.816	1
Del_6q26	Del_14q11.2	0.816	1
Del_14q11.2	Del_19p13.3	0.816	1
SELPLG	L1TD1	0.817	1
SELPLG	5q-Del	0.817	1
SELPLG	Amp_2q33.1	0.817	1
SELPLG	Amp_19q12	0.817	1
SELPLG	Del_3q26.31	0.817	1
MAPK6	GMNN	0.817	1
ATXN3L	SLC26A8	0.817	1
ATXN3L	Del_16p13.3	0.817	1
MGA	Amp_12p13.33	0.817	1
PLAGL2	Del_21q21.1	0.817	1
C2orf29	Del_3q26.31	0.817	1
SLC26A8	Amp_19q12	0.817	1
FKBP9	Del_3q26.31	0.817	1
ALDH1A3	GMNN	0.817	1
GMNN	Del_16p13.3	0.817	1
20p-Amp	Del_10q23.31	0.817	1
Amp_2q33.1	Del_16p13.3	0.817	1
Amp_10q22.3	Del_15q21.1	0.817	1
Amp_12p13.33	Del_1p36.11	0.817	1
Amp_19q12	Del_16p13.3	0.817	1
Amp_20q11.21	Del_3p26.3	0.817	1
ZFP36L2	7q-Amp	0.818	1
TXNDC2	BCOR	0.818	1
TXNDC2	DIP2B	0.818	1
BCOR	Del_6p25.3	0.818	1
BCOR	Del_19p13.3	0.818	1
PRRG1	Amp_16p11.2	0.818	1
RLIM	MAP4K3	0.818	1
RLIM	IDH1	0.818	1
RLIM	Del_5q22.2	0.818	1
MPHOSPH10	Del_5q22.2	0.818	1
LARP4B	Del_6p25.3	0.818	1
SLC12A6	12p-Amp	0.818	1
8q-Amp	Del_4q35.1	0.818	1
Del_10q23.31	Del_16q23.1	0.818	1
CRIPAK	RHOA	0.819	1
CRIPAK	IQCD	0.819	1
CRIPAK	IFT57	0.819	1
ATXN3L	ERBB2	0.819	1
PRPS1	12p-Amp	0.819	1
PRPS1	Del_1p13.2	0.819	1
PRPS1	Del_8p23.2	0.819	1
PTGDR	Del_1p13.2	0.819	1
20q-Amp	Del_7q31.1	0.819	1
8p-Amp	Del_18q21.2	0.819	1
8q-Amp	Del_3p26.3	0.819	1
9p-Amp	Amp_20q11.21	0.819	1
Amp_1q31.1	Del_3q26.31	0.819	1
Amp_1q31.1	Del_5q23.3	0.819	1
FAM123B	SMAD4	0.82	1
STARD3NL	8p-Amp	0.82	1
P2RY13	8p-Amp	0.82	1
NR1H3	8p-Amp	0.82	1
DCLK2	8p-Amp	0.82	1
PTEN	Amp_8p11.21	0.82	1
GPATCH8	8p-Amp	0.82	1
ACVR1B	NF2	0.821	1
SMAD2	RPTN	0.821	1
SMAD2	RBPJ	0.821	1
SMAD2	16p-Amp	0.821	1
RPTN	Del_12p13.1	0.821	1
PTCH1	8p-Amp	0.821	1
RB1	Del_5q22.2	0.821	1
C14orf184	22q-Del	0.821	1
HLA-A	Del_12p13.1	0.821	1
GPATCH8	Amp_5p12	0.821	1
BIRC3	Amp_5p12	0.821	1
12q-Amp	Amp_13q12.13	0.821	1
12q-Amp	Del_10q25.2	0.821	1
16p-Amp	Del_12p13.1	0.821	1
6p-Amp	4p-Del	0.821	1
9p-Amp	Amp_13q12.13	0.821	1
Amp_11p15.5	Amp_13q12.13	0.821	1
Amp_11p15.5	Del_10q25.2	0.821	1
TP53	6p-Amp	0.822	1
TP53	Amp_15q26.1	0.822	1
SELPLG	Del_15q15.2	0.822	1
PLAGL2	Amp_12p13.33	0.822	1
C11orf30	12q-Amp	0.822	1
ZFP36L2	12p-Amp	0.823	1
ZFP36L2	Amp_11p15.5	0.823	1
ZFP36L2	Del_21q21.1	0.823	1
BCOR	ERBB2	0.823	1
EGR1	Del_10q21.1	0.823	1
RPTN	Amp_11p15.5	0.823	1
ERBB2	DIP2B	0.823	1
PLEKHF2	9p-Amp	0.823	1
PLEKHF2	Del_10q21.1	0.823	1
VCX2	Del_10q21.1	0.823	1
RBPJ	12p-Amp	0.823	1
RBBP7	Amp_11p15.5	0.823	1
RBBP7	Del_1p13.2	0.823	1
Amp_1q31.1	Del_17q24.3	0.823	1
Amp_10q22.3	Del_15q15.2	0.823	1
TP53	Del_12p13.1	0.824	1
TXNDC2	SETD2	0.824	1
HIST1H1T	14q-Del	0.824	1
18p-Del	Del_3p14.2	0.824	1
Amp_20p11.21	Del_3p14.2	0.824	1
Del_6p25.3	Del_15q15.2	0.824	1
CRIPAK	CTNNB1	0.825	1
WNT1	IQCD	0.825	1
WNT1	ZNF486	0.825	1
GGT1	Del_1p33	0.825	1
RHOA	C14orf184	0.825	1
IQCD	C14orf184	0.825	1
ALG12	IFT57	0.825	1
C14orf184	ZNF486	0.825	1
NEXN	22q-Del	0.825	1
PRPS1	Amp_8p11.23	0.825	1
PTGDR	Amp_8p11.23	0.825	1
Del_2q22.1	Del_4q22.1	0.825	1
SOX9	PRPS1	0.826	1
WNT1	21q-Del	0.826	1
STARD3NL	Del_2p12	0.826	1
P2RY13	Del_2p12	0.826	1
NR1H3	PLAGL2	0.826	1
NR1H3	Del_2p12	0.826	1
PLAGL2	PCBP1	0.826	1
PLAGL2	DCLK2	0.826	1
PLAGL2	FYN	0.826	1
PLAGL2	16q-Amp	0.826	1
PCBP1	Del_2p12	0.826	1
RLIM	GMNN	0.826	1
MPHOSPH10	GMNN	0.826	1
DCLK2	Del_2p12	0.826	1
C14orf184	Del_5q21.2	0.826	1
FYN	Del_2p12	0.826	1
GPATCH8	Del_2p12	0.826	1
PRPS1	Del_5q23.3	0.826	1
PTGDR	Del_5q23.3	0.826	1
BIRC3	Del_2p12	0.826	1
GMNN	1p-Del	0.826	1
GMNN	Del_18q21.2	0.826	1
12q-Amp	Amp_20q13.12	0.826	1
16q-Amp	Del_2p12	0.826	1
Amp_13q12.13	Del_5q21.2	0.826	1
Amp_16p11.2	Del_22q13.32	0.826	1
Del_5q23.3	Del_7q31.1	0.826	1
RNF43	12q-Amp	0.827	1
GGT1	PRPS1	0.827	1
TPRKB	Del_7q31.1	0.827	1
MVK	Amp_8p11.21	0.827	1
CDK12	Del_12p13.1	0.827	1
PRPS1	HIST1H1T	0.827	1
HIST1H1T	Del_7q31.1	0.827	1
20q-Amp	5q-Del	0.827	1
22q-Del	Amp_16p11.2	0.827	1
Amp_2q33.1	Del_8p22	0.827	1
Amp_8p11.21	Amp_10q22.3	0.827	1
Amp_20p12.1	Del_5q22.2	0.827	1
RNF43	PCBP1	0.828	1
FAM123B	EGR1	0.828	1
FAM123B	PLEKHF2	0.828	1
MLH1	VCX2	0.828	1
STARD3NL	4p-Del	0.828	1
SELPLG	Del_1p33	0.828	1
NR1H3	ATM	0.828	1
ALPK2	6p-Amp	0.828	1
ASXL1	6p-Amp	0.828	1
SMAD4	Del_12p13.1	0.828	1
DCLK2	4p-Del	0.828	1
BIRC3	4p-Del	0.828	1
20p-Amp	17p-Del	0.828	1
20p-Amp	Del_15q15.2	0.828	1
2p-Amp	18p-Del	0.828	1
2q-Amp	18p-Del	0.828	1
Amp_15q26.1	Amp_20p11.21	0.828	1
SOX9	SLC12A6	0.829	1
ACVR1B	IFT57	0.829	1
RHOA	Del_16q23.1	0.829	1
IQCD	Del_16q23.1	0.829	1
PRRG1	BCORL1	0.829	1
VCX2	Del_18q21.2	0.829	1
BCORL1	Amp_10q22.3	0.829	1
HIST1H1T	Del_21q11.2	0.829	1
1p-Del	Del_10q23.31	0.829	1
Amp_5p12	Del_16q23.1	0.829	1
Amp_19q12	Del_10q25.2	0.829	1
Del_3q26.31	Del_10q25.2	0.829	1
APC	Amp_8q24.21	0.83	1
FAM9A	2p-Amp	0.83	1
FAM9A	2q-Amp	0.83	1
FAM9A	6p-Amp	0.83	1
FAM9A	Amp_15q26.1	0.83	1
THOC7	2p-Amp	0.83	1
THOC7	2q-Amp	0.83	1
THOC7	6p-Amp	0.83	1
THOC7	20p-Del	0.83	1
GRB2	2q-Amp	0.83	1
16p-Amp	15q-Del	0.83	1
6p-Amp	Del_2q22.1	0.83	1
CRIPAK	TXNDC2	0.831	1
MLH1	8p-Del	0.831	1
SELPLG	C2orf29	0.831	1
SELPLG	ALDH1A3	0.831	1
SELPLG	Del_16p13.3	0.831	1
MAPK6	C2orf29	0.831	1
MAPK6	Del_16p13.3	0.831	1
VCX2	20q-Amp	0.831	1
C2orf29	SLC26A8	0.831	1
C2orf29	Del_16p13.3	0.831	1
SMAD4	FKBP9	0.831	1
L1TD1	CTNNB1	0.831	1
FKBP9	Del_16p13.3	0.831	1
PTEN	16q-Amp	0.831	1
ALDH1A3	Del_16p13.3	0.831	1
CTNNB1	Amp_19q12	0.831	1
15q-Del	Amp_6p21.1	0.831	1
Amp_6p21.1	Del_18q21.2	0.831	1
Del_2p12	Del_5q22.2	0.831	1
APC	PTGDR	0.832	1
APC	Del_7q31.1	0.832	1
SOX9	ZFP36L2	0.832	1
SOX9	RPTN	0.832	1
SOX9	GMPS	0.832	1
TXNDC2	STARD3NL	0.832	1
TXNDC2	DCLK2	0.832	1
BCOR	PLEKHF2	0.832	1
STARD3NL	Del_19p13.3	0.832	1
RPTN	Del_5q23.3	0.832	1
NF1	Del_5q21.2	0.832	1
ATXN3L	1p-Del	0.832	1
P2RY13	TOP2B	0.832	1
P2RY13	Del_19p13.3	0.832	1
NR1H3	Del_6p25.3	0.832	1
PCBP1	TOP2B	0.832	1
PCBP1	Del_6p25.3	0.832	1
PCBP1	Del_6q26	0.832	1
RLIM	L1TD1	0.832	1
RLIM	5q-Del	0.832	1
RLIM	Amp_19q12	0.832	1
RLIM	Del_3q26.31	0.832	1
MPHOSPH10	NEXN	0.832	1
MPHOSPH10	Amp_19q12	0.832	1
VCX2	LARP4B	0.832	1
L1TD1	1p-Del	0.832	1
TOP2B	16q-Amp	0.832	1
DCLK2	Del_6p25.3	0.832	1
BIRC3	Del_6p25.3	0.832	1
16p-Amp	Del_5q23.3	0.832	1
1p-Del	Amp_19q12	0.832	1
Amp_8q24.21	Del_10q23.31	0.832	1
Amp_8q24.21	Del_15q22.33	0.832	1
Amp_20p12.1	Del_19p13.3	0.832	1
Del_5q23.3	Del_8q11.1	0.832	1
FAM123B	RLIM	0.833	1
GGT1	Amp_17q24.1	0.833	1
ATXN3L	21q-Del	0.833	1
TPRKB	ERBB2	0.833	1
ALPK2	Amp_6p21.1	0.833	1
ASXL1	Amp_6p21.1	0.833	1
VCX2	Amp_13q12.2	0.833	1
HIST1H1T	Amp_1q31.1	0.833	1
HIST1H1T	Amp_17q24.1	0.833	1
IDH1	20p-Del	0.833	1
17q-Amp	20p-Del	0.833	1
8p-Amp	Del_17q24.3	0.833	1
21q-Del	Del_3q26.31	0.833	1
FAM123B	MLH1	0.834	1
ZFP36L2	IDH1	0.834	1
SMAD2	8p-Amp	0.834	1
GGT1	PRKDC	0.834	1
PRKDC	HIST1H1T	0.834	1
RPTN	IDH1	0.834	1
RBPJ	17q-Amp	0.834	1
RBBP7	IDH1	0.834	1
HLA-A	MAP4K3	0.834	1
SETD2	6p-Amp	0.834	1
IDH1	Del_8q11.1	0.834	1
GMNN	Del_18q22.1	0.834	1
12p-Amp	13q-Amp	0.834	1
8p-Amp	Del_12p13.1	0.834	1
APC	TOP2B	0.835	1
APC	Del_6p25.3	0.835	1
ZFP36L2	GMNN	0.835	1
MLH1	12q-Amp	0.835	1
FMN2	ERBB2	0.835	1
RPTN	GMNN	0.835	1
RBPJ	GMNN	0.835	1
HLA-A	GMNN	0.835	1
GMNN	16p-Amp	0.835	1
GMNN	Del_8q11.1	0.835	1
KDM6A	Amp_8p11.23	0.835	1
20p-Amp	Del_4p16.1	0.835	1
APC	Amp_8p11.21	0.836	1
SOX9	CDH1	0.836	1
ATXN3L	14q-Del	0.836	1
ALPK2	PCBP1	0.836	1
ASXL1	DCLK2	0.836	1
FYN	Amp_17q12	0.836	1
13q-Amp	Del_1p33	0.836	1
21q-Del	Amp_11p15.5	0.836	1
ZFP36L2	FMN2	0.837	1
CDH1	ERBB2	0.837	1
MLH1	7q-Amp	0.837	1
WNT1	PLEKHF2	0.837	1
FMN2	16p-Amp	0.837	1
EGR1	C14orf184	0.837	1
MVK	Del_2p12	0.837	1
ST3GAL6	C14orf184	0.837	1
IQCD	Del_5q21.2	0.837	1
PLEKHF2	C14orf184	0.837	1
ALG12	PTCH1	0.837	1
ALG12	VCX2	0.837	1
PLAGL2	8q-Amp	0.837	1
PLAGL2	Amp_10q22.3	0.837	1
PRRG1	Del_2p12	0.837	1
PIK3R1	IDH1	0.837	1
VCX2	C14orf184	0.837	1
GMNN	14q-Del	0.837	1
13q-Amp	Amp_2q33.1	0.837	1
7p-Amp	Del_2p12	0.837	1
7q-Amp	Del_21q21.1	0.837	1
15q-Del	Del_2q22.1	0.837	1
Amp_10q22.3	Del_2p12	0.837	1
Amp_12p13.33	Del_18q12.2	0.837	1
Amp_13q12.13	Del_10q25.2	0.837	1
APC	Del_10q21.1	0.838	1
SELPLG	7p-Amp	0.838	1
ROS1	Amp_12p13.33	0.838	1
C2orf29	Amp_17q24.1	0.838	1
DDX26B	Del_12p13.1	0.838	1
12q-Amp	Amp_17q12	0.838	1
20p-Del	Amp_8p11.23	0.838	1
Amp_8q24.21	Del_3p14.2	0.838	1
APC	ZFP36L2	0.839	1
APC	RBPJ	0.839	1
APC	HLA-A	0.839	1
APC	Del_8q11.1	0.839	1
TP53	PLEKHF2	0.839	1
SMAD2	12q-Amp	0.839	1
ATM	Amp_8p11.23	0.839	1
ZNF486	Amp_16p11.2	0.839	1
Del_10q21.1	Del_12p13.1	0.839	1
FAM123B	PLAGL2	0.84	1
GGT1	Del_10q25.2	0.84	1
PRKDC	NR1H3	0.84	1
PRKDC	PCBP1	0.84	1
PRRG1	Amp_5p12	0.84	1
ROS1	C2orf29	0.84	1
VCX2	Del_18q22.1	0.84	1
CTNNB1	Del_6p25.3	0.84	1
CTNNB1	Del_6q26	0.84	1
2p-Amp	Del_3p14.2	0.84	1
6p-Amp	Del_3p14.2	0.84	1
Amp_5p12	Del_18q22.1	0.84	1
Amp_13q22.1	Del_5q22.2	0.84	1
Amp_15q26.1	Del_3p14.2	0.84	1
CRIPAK	VCX2	0.841	1
MGA	12p-Amp	0.841	1
ALPK2	8p-Amp	0.841	1
GMNN	Del_21q11.2	0.841	1
16q-Amp	8p-Del	0.841	1
20q-Amp	Del_5q23.3	0.841	1
TP53	Del_10q23.31	0.842	1
SOX9	Del_3p14.2	0.842	1
THOC7	20p-Amp	0.842	1
BCL9	BCORL1	0.842	1
ALG12	PIK3R1	0.842	1
PIK3R1	C14orf184	0.842	1
PRPS1	8q-Amp	0.842	1
PTGDR	7p-Amp	0.842	1
KDM6A	Del_1p33	0.842	1
Del_2q22.1	Del_8p23.2	0.842	1
Del_3p14.2	Del_5q23.3	0.842	1
FAM123B	TXNDC2	0.843	1
TXNDC2	Del_18p11.31	0.843	1
FMN2	FAM9A	0.843	1
FMN2	GRB2	0.843	1
STARD3NL	C11orf30	0.843	1
STARD3NL	Amp_6p21.1	0.843	1
STARD3NL	Del_3p26.3	0.843	1
NF2	Amp_16p11.2	0.843	1
CHUK	P2RY13	0.843	1
CHUK	GPATCH8	0.843	1
P2RY13	Del_3p26.3	0.843	1
NR1H3	Amp_6p21.1	0.843	1
C11orf30	PCBP1	0.843	1
PCBP1	Del_3p26.3	0.843	1
FYN	Amp_6p21.1	0.843	1
FYN	Del_3p26.3	0.843	1
PRPS1	Del_7q31.1	0.843	1
PTGDR	Del_7q31.1	0.843	1
BIRC3	Del_3p26.3	0.843	1
16q-Amp	Del_3p26.3	0.843	1
20q-Amp	Del_3p26.3	0.843	1
2p-Amp	Del_17p12	0.843	1
2q-Amp	Del_17p12	0.843	1
4p-Del	Del_12p13.1	0.843	1
Amp_15q26.1	Del_17p12	0.843	1
Del_3q26.31	Del_21q11.2	0.843	1
Del_6q26	Del_18p11.31	0.843	1
TXNDC2	ACVR1B	0.844	1
OR4D10	GMNN	0.844	1
RHOA	SMAD4	0.844	1
MGA	Del_6p25.3	0.844	1
VCX2	18p-Del	0.844	1
VCX2	Amp_20p11.21	0.844	1
C2orf29	8p-Del	0.844	1
DDX26B	GMNN	0.844	1
20q-Amp	Amp_1q31.1	0.844	1
18q-Del	Del_16p13.3	0.844	1
FMN2	Del_1p13.2	0.845	1
GGT1	6p-Amp	0.845	1
SELPLG	MPHOSPH10	0.845	1
PRKDC	GMNN	0.845	1
MGA	Amp_8p11.23	0.845	1
TPRKB	2p-Amp	0.845	1
TPRKB	2q-Amp	0.845	1
RLIM	SLC26A8	0.845	1
RLIM	FKBP9	0.845	1
RLIM	Del_16p13.3	0.845	1
ALDH1A3	1p-Del	0.845	1
HIST1H1T	2p-Amp	0.845	1
HIST1H1T	2q-Amp	0.845	1
HIST1H1T	6p-Amp	0.845	1
HIST1H1T	Amp_15q26.1	0.845	1
Amp_1q31.1	Del_10q23.31	0.845	1
Amp_8p11.23	Del_5q12.1	0.845	1
Amp_17q24.1	Del_10q23.31	0.845	1
STARD3NL	Del_22q13.32	0.846	1
ZNF486	Amp_8p11.23	0.846	1
2p-Amp	Del_5q12.1	0.846	1
2q-Amp	Del_5q12.1	0.846	1
8p-Amp	Amp_10q22.3	0.846	1
Amp_15q26.1	Del_5q12.1	0.846	1
ZFP36L2	L1TD1	0.847	1
ZFP36L2	NEXN	0.847	1
ZFP36L2	Amp_2q33.1	0.847	1
B2M	Amp_2q33.1	0.847	1
ACVR1B	PIK3R1	0.847	1
FAM9A	9p-Amp	0.847	1
FAM9A	Del_10q21.1	0.847	1
RPTN	5q-Del	0.847	1
RPTN	Amp_19q12	0.847	1
THOC7	Del_10q21.1	0.847	1
ATXN3L	RBPJ	0.847	1
ATXN3L	GMPS	0.847	1
ATXN3L	Del_8q11.1	0.847	1
GRB2	9p-Amp	0.847	1
PIK3R1	Del_16q23.1	0.847	1
RSPH3	9p-Amp	0.847	1
RSPH3	Del_10q21.1	0.847	1
RBPJ	Amp_2q33.1	0.847	1
HLA-A	NEXN	0.847	1
HLA-A	Del_3q26.31	0.847	1
16p-Amp	5q-Del	0.847	1
9p-Amp	Del_2q22.1	0.847	1
Amp_19q12	Del_8q11.1	0.847	1
ZFP36L2	NF1	0.848	1
CDH1	2p-Amp	0.848	1
CDH1	2q-Amp	0.848	1
SELPLG	BMPR2	0.848	1
RHOA	Del_2p12	0.848	1
NF1	16p-Amp	0.848	1
IQCD	PLAGL2	0.848	1
IQCD	Del_2p12	0.848	1
PLAGL2	ZNF486	0.848	1
IFT57	Del_2p12	0.848	1
RSPH3	Del_5q22.2	0.848	1
ZNF486	Del_2p12	0.848	1
Amp_6p21.1	Del_5q22.2	0.848	1
Del_10q25.2	Del_16p13.3	0.848	1
ZFP36L2	Del_10q23.31	0.849	1
ZFP36L2	Del_15q11.2	0.849	1
RHOA	BCORL1	0.849	1
RPTN	Del_10q23.31	0.849	1
BCL9	IFT57	0.849	1
IQCD	BCORL1	0.849	1
RBBP7	Del_10q23.31	0.849	1
7p-Amp	4p-Del	0.849	1
Amp_8q24.21	Del_2q22.1	0.849	1
CRIPAK	Del_10q25.2	0.85	1
TXNDC2	MVK	0.85	1
TXNDC2	PRRG1	0.85	1
ACVR1B	PLEKHF2	0.85	1
ACVR1B	CTNNB1	0.85	1
BCOR	SMAD2	0.85	1
SMAD2	Del_17q24.3	0.85	1
WNT1	THOC7	0.85	1
WNT1	GRB2	0.85	1
WNT1	RSPH3	0.85	1
WNT1	Del_2q22.1	0.85	1
GGT1	Del_4q35.1	0.85	1
OR4D10	ZBTB20	0.85	1
NF2	TPRKB	0.85	1
FAM9A	C14orf184	0.85	1
PRKDC	ATXN3L	0.85	1
THOC7	C14orf184	0.85	1
NF1	8q-Amp	0.85	1
ST3GAL6	KDM6A	0.85	1
ST3GAL6	Del_16q23.1	0.85	1
PLEKHF2	Del_16q23.1	0.85	1
ALG12	GRB2	0.85	1
ALG12	RSPH3	0.85	1
ALG12	Del_2q22.1	0.85	1
VCX2	KDM6A	0.85	1
TOP2B	Amp_10q22.3	0.85	1
C14orf184	Del_2q22.1	0.85	1
CTNNB1	Del_16q23.1	0.85	1
20p-Del	Amp_2q33.1	0.85	1
Amp_10q22.3	Del_6p25.3	0.85	1
APC	Del_8p23.2	0.851	1
ACVR1B	ATM	0.851	1
ST3GAL6	8q-Amp	0.851	1
DCLK2	Del_3p14.2	0.851	1
20p-Del	4q-Del	0.851	1
WNT1	8p-Amp	0.852	1
NF1	ERBB2	0.852	1
NR1H3	CREBBP	0.852	1
PTCH1	Amp_10q22.3	0.852	1
C11orf30	Del_3p14.2	0.852	1
PCBP1	CREBBP	0.852	1
RB1	Amp_10q22.3	0.852	1
GMNN	Del_15q22.33	0.852	1
16q-Amp	Del_15q22.33	0.852	1
6p-Amp	4q-Del	0.852	1
6p-Amp	Amp_11p15.5	0.852	1
1p-Del	Amp_13q22.1	0.852	1
4q-Del	Amp_15q26.1	0.852	1
Amp_15q26.1	Del_1p13.2	0.852	1
Amp_17q12	Del_12p13.1	0.852	1
Amp_20q13.12	Del_3p26.3	0.852	1
Amp_20q13.12	Del_8q11.1	0.852	1
SOX9	OR4D10	0.853	1
SOX9	DDX26B	0.853	1
TXNDC2	4q-Del	0.853	1
TXNDC2	Amp_11p15.5	0.853	1
ERBB2	Del_16q23.1	0.853	1
P2RY13	GMNN	0.853	1
NR1H3	GMNN	0.853	1
PCBP1	GMNN	0.853	1
TOP2B	12p-Amp	0.853	1
DCLK2	GMNN	0.853	1
GPATCH8	GMNN	0.853	1
12p-Amp	Del_6q26	0.853	1
4p-Del	Amp_10q22.3	0.853	1
4q-Del	Del_6p25.3	0.853	1
Amp_11p15.5	Del_6q26	0.853	1
Amp_11p15.5	Del_19p13.3	0.853	1
Del_1p13.2	Del_6p25.3	0.853	1
Del_6p25.3	Del_18q12.2	0.853	1
FAM123B	BCOR	0.854	1
MLH1	DIP2B	0.854	1
SMAD2	STARD3NL	0.854	1
SMAD2	NR1H3	0.854	1
SMAD2	FYN	0.854	1
SMAD2	GPATCH8	0.854	1
SMAD2	16q-Amp	0.854	1
FAM9A	Amp_20p12.1	0.854	1
PRKDC	12q-Amp	0.854	1
NR1H3	Del_12p13.1	0.854	1
GPATCH8	Del_12p13.1	0.854	1
MAP4K3	Del_10q21.1	0.854	1
BIRC3	Del_12p13.1	0.854	1
IDH1	12q-Amp	0.854	1
IDH1	8p-Amp	0.854	1
12q-Amp	17q-Amp	0.854	1
14q-Del	Del_5q21.2	0.854	1
4q-Del	Amp_11p15.5	0.854	1
Amp_1q31.1	Del_15q11.2	0.854	1
Amp_10q22.3	Amp_20p12.1	0.854	1
Amp_17q12	Del_17q24.3	0.854	1
Del_3p14.2	Del_18q12.2	0.854	1
BCOR	THOC7	0.855	1
BCOR	GRB2	0.855	1
BCOR	Del_2q22.1	0.855	1
THOC7	Del_17q24.3	0.855	1
GRB2	LARP4B	0.855	1
DIP2B	RSPH3	0.855	1
RSPH3	Del_17q24.3	0.855	1
C14orf184	8p-Del	0.855	1
2p-Amp	Del_18p11.31	0.855	1
2q-Amp	Del_18p11.31	0.855	1
Amp_8p11.23	Del_5q21.2	0.855	1
Del_5q21.2	Del_16p13.3	0.855	1
APC	Amp_5p12	0.856	1
TXNDC2	Amp_16p11.2	0.856	1
NF2	GMNN	0.856	1
15q-Del	Del_16q23.1	0.856	1
1p-Del	Amp_17q24.1	0.856	1
Amp_15q26.1	Del_15q11.2	0.856	1
SOX9	2p-Amp	0.857	1
SOX9	2q-Amp	0.857	1
IQCD	PIK3R1	0.857	1
PIK3R1	5q-Del	0.857	1
CTNNB1	Del_2q22.1	0.857	1
6p-Amp	Del_5q23.3	0.857	1
14q-Del	Del_17q24.3	0.857	1
Amp_2q33.1	Del_18q12.2	0.857	1
Amp_13q12.13	Del_5q23.3	0.857	1
Amp_20p11.21	Del_21q11.2	0.857	1
RNF43	C14orf184	0.858	1
TP53	Amp_6p21.1	0.858	1
ZFP36L2	MLH1	0.858	1
ACVR1B	C11orf30	0.858	1
MLH1	GMPS	0.858	1
STARD3NL	Del_4q35.1	0.858	1
NF2	NR1H3	0.858	1
RHOA	Amp_5p12	0.858	1
FBXW7	RSPH3	0.858	1
CHUK	KDM6A	0.858	1
RLIM	MPHOSPH10	0.858	1
RLIM	1p-Del	0.858	1
SMAD4	4q-Del	0.858	1
SMAD4	Del_17q24.3	0.858	1
ZNF486	Amp_5p12	0.858	1
20q-Amp	Del_10q23.31	0.858	1
Amp_6p21.1	Del_16q23.1	0.858	1
Amp_17q24.1	Del_21q11.2	0.858	1
Del_3p26.3	Del_16q23.1	0.858	1
FAM123B	FAM9A	0.859	1
FAM123B	GRB2	0.859	1
FAM123B	Del_2q22.1	0.859	1
ZFP36L2	MAPK6	0.859	1
ZFP36L2	SLC26A8	0.859	1
ZFP36L2	FKBP9	0.859	1
B2M	C2orf29	0.859	1
MLH1	GRB2	0.859	1
MLH1	RSPH3	0.859	1
SELPLG	RPTN	0.859	1
EGR1	Del_2p12	0.859	1
RPTN	C2orf29	0.859	1
MGA	NR1H3	0.859	1
MGA	16q-Amp	0.859	1
ST3GAL6	Del_2p12	0.859	1
PLEKHF2	Amp_16p11.2	0.859	1
PLEKHF2	Del_2p12	0.859	1
VCX2	Del_2p12	0.859	1
VCX2	Del_4p16.1	0.859	1
C2orf29	Del_8q11.1	0.859	1
RBPJ	ALDH1A3	0.859	1
ALDH1A3	Del_8q11.1	0.859	1
GMPS	Del_16p13.3	0.859	1
PRPS1	2p-Amp	0.859	1
PRPS1	2q-Amp	0.859	1
PRPS1	6p-Amp	0.859	1
PRPS1	Amp_15q26.1	0.859	1
PTGDR	2p-Amp	0.859	1
PTGDR	2q-Amp	0.859	1
PTGDR	6p-Amp	0.859	1
12q-Amp	Del_3p14.2	0.859	1
16p-Amp	Del_16p13.3	0.859	1
2p-Amp	Del_7q31.1	0.859	1
2q-Amp	Del_7q31.1	0.859	1
6p-Amp	Del_7q31.1	0.859	1
8p-Del	Del_10q21.1	0.859	1
Amp_8p11.23	Del_17p12	0.859	1
Amp_15q26.1	Del_7q31.1	0.859	1
Amp_16p11.2	Del_4q22.1	0.859	1
Del_6p25.3	Del_8p22	0.859	1
APC	Del_10q23.31	0.86	1
SOX9	FMN2	0.86	1
GGT1	Del_4q22.1	0.86	1
NF2	CDK12	0.86	1
ATXN3L	CDK12	0.86	1
MVK	ASXL1	0.86	1
ERBB2	PRPS1	0.86	1
ERBB2	PTGDR	0.86	1
PRRG1	Amp_6p21.1	0.86	1
CDK12	Del_3q26.31	0.86	1
20p-Del	Del_17q24.3	0.86	1
21q-Del	Del_8p22	0.86	1
8p-Del	Del_21q11.2	0.86	1
Amp_1q31.1	Del_7q31.1	0.86	1
Amp_10q22.3	Del_3p26.3	0.86	1
Amp_17q24.1	Del_7q31.1	0.86	1
CRIPAK	SMAD2	0.861	1
SMAD2	SETD2	0.861	1
OR4D10	Amp_19q12	0.861	1
OR4D10	Del_3q26.31	0.861	1
FBXW7	GMPS	0.861	1
DDX26B	L1TD1	0.861	1
GMNN	Del_18q12.2	0.861	1
Amp_1q31.1	Amp_20q12	0.861	1
APC	RLIM	0.862	1
GGT1	CDK12	0.862	1
RHOA	NF1	0.862	1
MVK	GMNN	0.862	1
VCX2	Del_17p12	0.862	1
CDK12	HIST1H1T	0.862	1
GMNN	Amp_10q22.3	0.862	1
14q-Del	Del_16p13.3	0.862	1
21q-Del	Del_8p23.2	0.862	1
APC	HIST1H1T	0.863	1
FAM123B	CTNNB1	0.863	1
SOX9	TXNDC2	0.863	1
WNT1	GGT1	0.863	1
WNT1	TPRKB	0.863	1
WNT1	HIST1H1T	0.863	1
GGT1	ALG12	0.863	1
GGT1	C14orf184	0.863	1
TPRKB	C14orf184	0.863	1
ALPK2	C14orf184	0.863	1
ASXL1	ALG12	0.863	1
ALG12	HIST1H1T	0.863	1
VCX2	17p-Del	0.863	1
C14orf184	HIST1H1T	0.863	1
C14orf184	Amp_17q12	0.863	1
12p-Amp	Amp_13q22.1	0.863	1
7q-Amp	Del_5q12.1	0.863	1
9p-Amp	Amp_13q12.2	0.863	1
Amp_12p13.33	Del_18q22.1	0.863	1
BCOR	SETD2	0.864	1
GGT1	PTCH1	0.864	1
ATXN3L	Del_15q22.33	0.864	1
20p-Amp	Del_10q25.2	0.864	1
Amp_10q22.3	Del_21q11.2	0.864	1
Del_10q25.2	Del_16q23.1	0.864	1
ARID1A	PLEKHF2	0.865	1
ARID1A	VCX2	0.865	1
BCOR	IDH1	0.865	1
EGR1	21q-Del	0.865	1
FBXW7	L1TD1	0.865	1
FBXW7	NEXN	0.865	1
ZBTB20	PCBP1	0.865	1
ZBTB20	GPATCH8	0.865	1
ZBTB20	16q-Amp	0.865	1
P2RY13	IDH1	0.865	1
P2RY13	17q-Amp	0.865	1
PLEKHF2	21q-Del	0.865	1
NR1H3	MAP4K3	0.865	1
PCBP1	IDH1	0.865	1
DCLK2	IDH1	0.865	1
FYN	MAP4K3	0.865	1
MAP4K3	Del_17q24.3	0.865	1
HIST1H1T	Del_21q21.1	0.865	1
17q-Amp	Del_17q24.3	0.865	1
8p-Amp	Amp_1q31.1	0.865	1
8p-Amp	Del_5q22.2	0.865	1
1p-Del	Del_10q25.2	0.865	1
22q-Del	Amp_5p12	0.865	1
Amp_5p12	Del_4p16.1	0.865	1
APC	ASXL1	0.866	1
SOX9	12p-Amp	0.866	1
ZFP36L2	Amp_8p11.23	0.866	1
B2M	Del_1p33	0.866	1
STARD3NL	4q-Del	0.866	1
STARD3NL	Amp_11p15.5	0.866	1
FBXW7	Amp_12p13.33	0.866	1
SMAD4	Amp_20p12.1	0.866	1
DCLK2	12p-Amp	0.866	1
BMPR2	PRPS1	0.866	1
ZNF486	Amp_8p11.21	0.866	1
16p-Amp	Amp_8p11.23	0.866	1
16q-Amp	4q-Del	0.866	1
21q-Del	Amp_12p13.33	0.866	1
TXNDC2	IQCD	0.867	1
PLAGL2	21q-Del	0.867	1
PLAGL2	Del_5q21.2	0.867	1
ZNF486	Del_6p25.3	0.867	1
ZNF486	Del_19p13.3	0.867	1
GMNN	Del_21q21.1	0.867	1
CTNNB1	Amp_6p21.1	0.867	1
Del_2p12	Del_5q21.2	0.867	1
Del_5q12.1	Del_15q22.33	0.867	1
Del_7q31.1	Del_21q11.2	0.867	1
Del_12p13.1	Del_15q21.1	0.867	1
EGR1	BCL9	0.868	1
EGR1	NLRC4	0.868	1
BCL9	PLEKHF2	0.868	1
BCL9	VCX2	0.868	1
BCL9	Del_6p25.3	0.868	1
ALG12	SETD2	0.868	1
NLRC4	Del_6p25.3	0.868	1
VCX2	SLC12A6	0.868	1
C14orf184	SETD2	0.868	1
BCORL1	Del_6p25.3	0.868	1
Amp_8p11.23	Amp_15q26.1	0.868	1
Amp_8p11.21	Del_19p13.3	0.868	1
Amp_20q13.12	Del_5q23.3	0.868	1
Del_16p13.3	Del_21q11.2	0.868	1
TPRKB	12q-Amp	0.869	1
TPRKB	9p-Amp	0.869	1
Amp_1q31.1	Del_1p33	0.869	1
Amp_2q33.1	Del_8p23.2	0.869	1
Del_3p14.2	Del_12p13.1	0.869	1
Del_5q12.1	Del_10q21.1	0.869	1
APC	14q-Del	0.87	1
SMAD2	PRRG1	0.87	1
NF2	L1TD1	0.87	1
NF2	5q-Del	0.87	1
FAM9A	Del_2p12	0.87	1
THOC7	PLAGL2	0.87	1
THOC7	Del_2p12	0.87	1
FBXW7	CHUK	0.87	1
FBXW7	Amp_8p11.23	0.87	1
ASXL1	MAP4K3	0.87	1
GRB2	Del_2p12	0.87	1
PLAGL2	RSPH3	0.87	1
PLAGL2	Del_2q22.1	0.87	1
PRRG1	Del_12p13.1	0.87	1
PCBP1	Del_4q22.1	0.87	1
RSPH3	Del_2p12	0.87	1
L1TD1	12q-Amp	0.87	1
HIST1H1T	15q-Del	0.87	1
IDH1	Amp_17q12	0.87	1
ZNF486	8p-Amp	0.87	1
GMNN	15q-Del	0.87	1
12p-Amp	20q-Amp	0.87	1
20q-Amp	Del_1p13.2	0.87	1
Amp_6p21.1	Del_1p13.2	0.87	1
Amp_10q22.3	Del_12p13.1	0.87	1
Amp_19q12	Del_4q35.1	0.87	1
Del_3q26.31	Del_10q21.1	0.87	1
FAM123B	NF1	0.871	1
ZFP36L2	Del_15q21.1	0.871	1
B2M	Del_15q21.1	0.871	1
ACVR1B	FAM9A	0.871	1
ACVR1B	Del_12p13.1	0.871	1
SMAD2	KDM6A	0.871	1
FAM9A	KDM6A	0.871	1
FAM9A	Del_16q23.1	0.871	1
RPTN	MPHOSPH10	0.871	1
THOC7	Del_16q23.1	0.871	1
GRB2	KDM6A	0.871	1
RSPH3	KDM6A	0.871	1
RLIM	RBBP7	0.871	1
RLIM	GMPS	0.871	1
RLIM	Del_8q11.1	0.871	1
MPHOSPH10	RBPJ	0.871	1
RBPJ	1p-Del	0.871	1
Amp_15q26.1	Del_18q21.2	0.871	1
Del_2q22.1	Del_16q23.1	0.871	1
TP53	NEXN	0.872	1
RHOA	GMNN	0.872	1
IQCD	GMNN	0.872	1
IFT57	GMNN	0.872	1
ROS1	12q-Amp	0.872	1
ZNF486	GMNN	0.872	1
8q-Amp	Del_15q21.1	0.872	1
Amp_20p11.21	Del_5q22.2	0.872	1
FAM123B	15q-Del	0.873	1
SOX9	DCLK2	0.873	1
BCOR	Del_3p14.2	0.873	1
SELPLG	DDX26B	0.873	1
OR4D10	C2orf29	0.873	1
OR4D10	ALDH1A3	0.873	1
OR4D10	Del_16p13.3	0.873	1
ALG12	Del_3p14.2	0.873	1
C14orf184	Del_3p14.2	0.873	1
BIRC3	Del_5q23.3	0.873	1
7q-Amp	Del_6p25.3	0.873	1
8p-Amp	Del_3q26.31	0.873	1
Amp_13q22.1	Del_10q25.2	0.873	1
Del_12p13.1	Del_15q15.2	0.873	1
TP53	PIK3R1	0.874	1
TP53	Del_1p33	0.874	1
FMN2	GMNN	0.874	1
ERBB2	HLA-A	0.874	1
ERBB2	GMPS	0.874	1
13q-Amp	21q-Del	0.874	1
Amp_1q31.1	Del_8q11.1	0.874	1
Amp_17q24.1	Del_8q11.1	0.874	1
CRIPAK	MAP4K3	0.875	1
RNF43	KDM6A	0.875	1
RNF43	Del_16q23.1	0.875	1
FAM123B	12p-Amp	0.875	1
EGR1	PTEN	0.875	1
ST3GAL6	PTEN	0.875	1
GRB2	Amp_13q12.13	0.875	1
VCX2	Del_18p11.31	0.875	1
ATM	Del_7q31.1	0.875	1
12p-Amp	Amp_20q12	0.875	1
Amp_1q31.1	Del_22q13.32	0.875	1
Del_6p25.3	Del_18q21.2	0.875	1
Del_6p25.3	Del_21q11.2	0.875	1
Del_10q25.2	Del_21q11.2	0.875	1
WNT1	PTGDR	0.876	1
WNT1	Del_7q31.1	0.876	1
STARD3NL	ATXN3L	0.876	1
STARD3NL	NEXN	0.876	1
SELPLG	CDK12	0.876	1
MAPK6	CDK12	0.876	1
EGR1	Amp_5p12	0.876	1
ATXN3L	P2RY13	0.876	1
ATXN3L	NR1H3	0.876	1
P2RY13	NEXN	0.876	1
P2RY13	Del_3q26.31	0.876	1
ST3GAL6	Amp_5p12	0.876	1
NR1H3	NEXN	0.876	1
ALG12	PTGDR	0.876	1
ALG12	Del_7q31.1	0.876	1
PLAGL2	Amp_8p11.21	0.876	1
PCBP1	L1TD1	0.876	1
RLIM	Del_5q21.2	0.876	1
C2orf29	CDK12	0.876	1
DCLK2	Amp_2q33.1	0.876	1
DCLK2	Amp_19q12	0.876	1
C14orf184	PRPS1	0.876	1
C14orf184	PTGDR	0.876	1
C14orf184	Del_7q31.1	0.876	1
ALDH1A3	CDK12	0.876	1
GPATCH8	NEXN	0.876	1
GPATCH8	Amp_19q12	0.876	1
GPATCH8	Del_3q26.31	0.876	1
12q-Amp	Amp_20q12	0.876	1
13q-Amp	8p-Amp	0.876	1
16q-Amp	5q-Del	0.876	1
Amp_5p12	Del_17p12	0.876	1
Amp_8p11.21	Del_2p12	0.876	1
ZFP36L2	Del_15q15.2	0.877	1
MLH1	FBXW7	0.877	1
RHOA	CHUK	0.877	1
RHOA	C11orf30	0.877	1
RHOA	Del_3p26.3	0.877	1
NF1	12q-Amp	0.877	1
NF1	9p-Amp	0.877	1
CHUK	IFT57	0.877	1
CHUK	ZNF486	0.877	1
TPRKB	DIP2B	0.877	1
DIP2B	HIST1H1T	0.877	1
IFT57	Amp_6p21.1	0.877	1
PTGDR	Amp_13q12.13	0.877	1
20p-Del	Amp_12p13.33	0.877	1
APC	Del_14q11.2	0.878	1
WNT1	MGA	0.878	1
RPTN	PTCH1	0.878	1
THOC7	Amp_16p11.2	0.878	1
MGA	ALG12	0.878	1
MGA	C14orf184	0.878	1
GRB2	7q-Amp	0.878	1
BMPR2	8p-Amp	0.878	1
SETD2	IDH1	0.878	1
8q-Amp	4q-Del	0.878	1
9p-Amp	18p-Del	0.878	1
9p-Amp	Amp_8p11.23	0.878	1
Amp_6p21.1	Del_5q23.3	0.878	1
Amp_15q26.1	Del_18q22.1	0.878	1
Amp_16p11.2	Del_2q22.1	0.878	1
CDH1	Amp_2q33.1	0.879	1
BCOR	Del_3q26.31	0.879	1
PLAGL2	PIK3R1	0.879	1
DIP2B	Del_3q26.31	0.879	1
VCX2	Amp_8p11.23	0.879	1
VCX2	Del_18q12.2	0.879	1
SMAD4	BIRC3	0.879	1
TOP2B	Amp_5p12	0.879	1
LARP4B	NEXN	0.879	1
LARP4B	Del_3q26.31	0.879	1
12q-Amp	Amp_11p15.5	0.879	1
20q-Amp	Del_19p13.3	0.879	1
17p-Del	Amp_8p11.23	0.879	1
Amp_13q12.13	Amp_17q24.1	0.879	1
CHUK	BCORL1	0.88	1
BCL9	PIK3R1	0.88	1
ERBB2	NLRC4	0.88	1
ALG12	SMAD4	0.88	1
GMNN	18q-Del	0.88	1
17q-Amp	Amp_10q22.3	0.88	1
6p-Amp	Amp_20q13.12	0.88	1
Amp_1q31.1	Amp_17q24.1	0.88	1
Amp_10q22.3	Del_5q12.1	0.88	1
Amp_12p13.33	Amp_20p11.21	0.88	1
Amp_15q26.1	Amp_20q13.12	0.88	1
Amp_15q26.1	Del_1p33	0.88	1
FAM123B	DDX26B	0.881	1
TXNDC2	PRKDC	0.881	1
GGT1	PLAGL2	0.881	1
GGT1	Del_2p12	0.881	1
EGR1	GMNN	0.881	1
PRKDC	Del_6p25.3	0.881	1
FBXW7	12p-Amp	0.881	1
TPRKB	PLAGL2	0.881	1
TPRKB	Del_2p12	0.881	1
ST3GAL6	GMNN	0.881	1
PLEKHF2	GMNN	0.881	1
NR1H3	Amp_12p13.33	0.881	1
PLAGL2	HIST1H1T	0.881	1
VCX2	GMNN	0.881	1
HIST1H1T	Del_2p12	0.881	1
16q-Amp	15q-Del	0.881	1
20p-Amp	4q-Del	0.881	1
8p-Del	Amp_20p12.1	0.881	1
8p-Del	Del_17q24.3	0.881	1
Del_1p33	Del_10q25.2	0.881	1
BCOR	12q-Amp	0.882	1
BCOR	9p-Amp	0.882	1
EGR1	PIK3R1	0.882	1
ALPK2	Amp_8p11.23	0.882	1
ASXL1	ZNF486	0.882	1
ALG12	12p-Amp	0.882	1
DIP2B	12q-Amp	0.882	1
DIP2B	Del_10q21.1	0.882	1
SMAD4	Del_5q23.3	0.882	1
RBBP7	Del_10q25.2	0.882	1
C14orf184	12p-Amp	0.882	1
C14orf184	7q-Amp	0.882	1
LARP4B	12q-Amp	0.882	1
8q-Amp	17p-Del	0.882	1
Amp_5p12	Del_4q35.1	0.882	1
Amp_16p11.2	Del_12p13.1	0.882	1
APC	SELPLG	0.883	1
CRIPAK	GGT1	0.883	1
CRIPAK	TPRKB	0.883	1
CRIPAK	CDK12	0.883	1
ZFP36L2	B2M	0.883	1
ZFP36L2	RPTN	0.883	1
ZFP36L2	RBBP7	0.883	1
ZFP36L2	Del_8q11.1	0.883	1
ACVR1B	ALPK2	0.883	1
RPTN	HLA-A	0.883	1
RPTN	GMPS	0.883	1
VCX2	Del_14q11.2	0.883	1
VCX2	Del_15q21.1	0.883	1
SMAD4	Del_10q25.2	0.883	1
ATM	Del_16p13.3	0.883	1
9p-Amp	Amp_8p11.21	0.883	1
20p-Del	Del_10q23.31	0.883	1
TP53	Del_3p14.2	0.884	1
FAM123B	GMNN	0.884	1
TXNDC2	ST3GAL6	0.884	1
NF2	Del_7q31.1	0.884	1
MAPK6	12q-Amp	0.884	1
EGR1	Del_6p25.3	0.884	1
PLEKHF2	TOP2B	0.884	1
PLEKHF2	Del_19p13.3	0.884	1
VCX2	TOP2B	0.884	1
SLC26A8	12q-Amp	0.884	1
FKBP9	Del_10q21.1	0.884	1
PRPS1	Del_4q35.1	0.884	1
12q-Amp	Del_16p13.3	0.884	1
Amp_17q12	Del_5q21.2	0.884	1
Del_10q21.1	Del_16p13.3	0.884	1
APC	22q-Del	0.885	1
APC	Del_4q35.1	0.885	1
TP53	PTCH1	0.885	1
ACVR1B	17q-Amp	0.885	1
SMAD2	Amp_11p15.5	0.885	1
OR4D10	Amp_8p11.21	0.885	1
THOC7	Del_4p16.1	0.885	1
CDK12	PRPS1	0.885	1
CDK12	Del_7q31.1	0.885	1
IDH1	KDM6A	0.885	1
Amp_11p15.5	Del_12p13.1	0.885	1
Amp_20p12.1	Del_10q25.2	0.885	1
Amp_20q13.12	Del_17q24.3	0.885	1
Del_3p14.2	Del_18p11.31	0.885	1
Del_10q21.1	Del_14q11.2	0.885	1
SMAD2	IQCD	0.886	1
SMAD2	IFT57	0.886	1
FMN2	STARD3NL	0.886	1
FMN2	NR1H3	0.886	1
FMN2	BIRC3	0.886	1
FMN2	16q-Amp	0.886	1
STARD3NL	SELPLG	0.886	1
STARD3NL	MAPK6	0.886	1
SELPLG	PCBP1	0.886	1
SELPLG	BIRC3	0.886	1
SELPLG	16q-Amp	0.886	1
SELPLG	Del_15q22.33	0.886	1
MAPK6	NR1H3	0.886	1
MAPK6	DCLK2	0.886	1
MAPK6	FYN	0.886	1
THOC7	BCORL1	0.886	1
ZBTB20	Del_3p14.2	0.886	1
P2RY13	Amp_8q24.21	0.886	1
NR1H3	SLC26A8	0.886	1
PCBP1	C2orf29	0.886	1
PCBP1	SLC26A8	0.886	1
PCBP1	FKBP9	0.886	1
PCBP1	ALDH1A3	0.886	1
ALDH1A3	BIRC3	0.886	1
SLC12A6	Del_2q22.1	0.886	1
16q-Amp	Del_16p13.3	0.886	1
17q-Amp	Del_3p14.2	0.886	1
6p-Amp	Amp_17q24.1	0.886	1
4q-Del	Amp_10q22.3	0.886	1
Del_15q22.33	Del_16p13.3	0.886	1
TP53	TXNDC2	0.887	1
SOX9	WNT1	0.887	1
SELPLG	7q-Amp	0.887	1
RHOA	PTCH1	0.887	1
RHOA	RB1	0.887	1
ALPK2	Del_3q26.31	0.887	1
ASXL1	NEXN	0.887	1
ASXL1	5q-Del	0.887	1
FYN	Del_10q23.31	0.887	1
20q-Amp	Amp_12p13.33	0.887	1
7q-Amp	Del_16p13.3	0.887	1
8q-Amp	Del_15q15.2	0.887	1
5q-Del	Amp_17q12	0.887	1
APC	THOC7	0.888	1
APC	GRB2	0.888	1
FAM123B	HIST1H1T	0.888	1
SOX9	12q-Amp	0.888	1
MLH1	GGT1	0.888	1
RHOA	SETD2	0.888	1
NF1	Amp_6p21.1	0.888	1
VCX2	Del_15q15.2	0.888	1
SETD2	ZNF486	0.888	1
20p-Amp	Amp_15q26.1	0.888	1
7p-Amp	9p-Amp	0.888	1
8q-Amp	Del_10q21.1	0.888	1
Amp_6p21.1	Amp_13q12.13	0.888	1
Amp_20p11.21	Del_4q22.1	0.888	1
Del_6p25.3	Del_18q22.1	0.888	1
ZFP36L2	22q-Del	0.889	1
TXNDC2	21q-Del	0.889	1
WNT1	2p-Amp	0.889	1
WNT1	2q-Amp	0.889	1
WNT1	6p-Amp	0.889	1
WNT1	Amp_15q26.1	0.889	1
ALG12	2p-Amp	0.889	1
ALG12	2q-Amp	0.889	1
ALG12	6p-Amp	0.889	1
ALG12	Amp_15q26.1	0.889	1
RBBP7	Del_4p16.1	0.889	1
C14orf184	2q-Amp	0.889	1
C14orf184	Amp_15q26.1	0.889	1
16p-Amp	22q-Del	0.889	1
21q-Del	Del_6p25.3	0.889	1
Amp_20p12.1	Del_15q22.33	0.889	1
Del_5q21.2	Del_6p25.3	0.889	1
APC	Del_5q22.2	0.89	1
TXNDC2	TOP2B	0.89	1
SELPLG	8p-Amp	0.89	1
ATXN3L	Amp_10q22.3	0.89	1
MVK	NEXN	0.89	1
GRB2	Del_5q21.2	0.89	1
RLIM	CDK12	0.89	1
VCX2	SMAD4	0.89	1
ALDH1A3	8p-Amp	0.89	1
NEXN	Amp_10q22.3	0.89	1
HIST1H1T	Del_16q23.1	0.89	1
Amp_5p12	Amp_6p21.1	0.89	1
Amp_20q12	Del_2q22.1	0.89	1
NF2	SLC26A8	0.891	1
FAM9A	GMNN	0.891	1
IQCD	Del_21q11.2	0.891	1
DIP2B	Del_1p13.2	0.891	1
C2orf29	Del_4q35.1	0.891	1
BMPR2	6p-Amp	0.891	1
PRPS1	12q-Amp	0.891	1
PTGDR	Del_10q21.1	0.891	1
GMNN	Del_2q22.1	0.891	1
2q-Amp	Del_10q25.2	0.891	1
Amp_1q31.1	Del_4q35.1	0.891	1
Amp_20q12	Del_3p26.3	0.891	1
CDH1	ALG12	0.892	1
SMAD2	NLRC4	0.892	1
BCL9	Del_12p13.1	0.892	1
PRRG1	Del_5q23.3	0.892	1
7p-Amp	Del_6p25.3	0.892	1
8q-Amp	Amp_15q26.1	0.892	1
8q-Amp	Del_6p25.3	0.892	1
8q-Amp	Del_19p13.3	0.892	1
14q-Del	Del_10q23.31	0.892	1
18q-Del	Del_6p25.3	0.892	1
Amp_2q33.1	Del_18q21.2	0.892	1
Amp_13q22.1	Del_2q22.1	0.892	1
Amp_13q22.1	Del_5q23.3	0.892	1
Amp_16p11.2	Del_18q12.2	0.892	1
ACVR1B	PTCH1	0.893	1
ACVR1B	RB1	0.893	1
BCOR	SLC26A8	0.893	1
BCOR	Del_16p13.3	0.893	1
GGT1	CTNNB1	0.893	1
SELPLG	LARP4B	0.893	1
FAM9A	Amp_5p12	0.893	1
EGR1	8p-Amp	0.893	1
EGR1	Del_3p26.3	0.893	1
PLAGL2	Del_7q31.1	0.893	1
DIP2B	C2orf29	0.893	1
VCX2	Amp_6p21.1	0.893	1
VCX2	Del_3p26.3	0.893	1
C2orf29	LARP4B	0.893	1
RB1	CDK12	0.893	1
PRPS1	Del_2p12	0.893	1
PTGDR	Del_2p12	0.893	1
8q-Amp	Del_2q22.1	0.893	1
Amp_1q31.1	Amp_5p12	0.893	1
Amp_5p12	Amp_17q24.1	0.893	1
Amp_5p12	Del_18p11.31	0.893	1
Amp_8q24.21	Amp_15q26.1	0.893	1
Amp_20p11.21	Del_10q25.2	0.893	1
Del_16p13.3	Del_17q24.3	0.893	1
CDH1	NR1H3	0.894	1
CDH1	PCBP1	0.894	1
RHOA	MAP4K3	0.894	1
RHOA	IDH1	0.894	1
ZBTB20	IFT57	0.894	1
ERBB2	SETD2	0.894	1
IQCD	17q-Amp	0.894	1
IQCD	Del_3p14.2	0.894	1
IFT57	IDH1	0.894	1
SETD2	Del_3q26.31	0.894	1
IDH1	ZNF486	0.894	1
Del_3p14.2	Del_8p23.2	0.894	1
Del_6p25.3	Del_15q22.33	0.894	1
CRIPAK	Del_5q12.1	0.895	1
TXNDC2	PTCH1	0.895	1
OR4D10	16p-Amp	0.895	1
RPTN	Del_5q21.2	0.895	1
GRB2	Amp_13q12.2	0.895	1
PIK3R1	RLIM	0.895	1
DDX26B	GMPS	0.895	1
PTGDR	Amp_13q12.2	0.895	1
Amp_13q12.2	Del_2q22.1	0.895	1
Del_3p26.3	Del_10q23.31	0.895	1
APC	ROS1	0.896	1
STARD3NL	RLIM	0.896	1
STARD3NL	1p-Del	0.896	1
ASXL1	PLAGL2	0.896	1
PCBP1	RLIM	0.896	1
RLIM	BIRC3	0.896	1
MPHOSPH10	BIRC3	0.896	1
Amp_2q33.1	Del_17p12	0.896	1
Amp_20q13.12	Del_4q22.1	0.896	1
ACVR1B	NEXN	0.897	1
ACVR1B	Amp_2q33.1	0.897	1
BCOR	PTGDR	0.897	1
GGT1	Amp_16p11.2	0.897	1
THOC7	Del_15q11.2	0.897	1
NF1	ST3GAL6	0.897	1
ATXN3L	KDM6A	0.897	1
GRB2	ATM	0.897	1
DIP2B	Del_7q31.1	0.897	1
C14orf184	Del_10q23.31	0.897	1
LARP4B	Del_7q31.1	0.897	1
5q-Del	Del_16q23.1	0.897	1
Amp_2q33.1	Del_16q23.1	0.897	1
Del_2q22.1	Del_15q11.2	0.897	1
Del_5q22.2	Del_10q23.31	0.897	1
Del_7q31.1	Del_17q24.3	0.897	1
RNF43	PLEKHF2	0.898	1
FMN2	NLRC4	0.898	1
CHUK	22q-Del	0.898	1
CHUK	Del_4p16.1	0.898	1
RLIM	12q-Amp	0.898	1
MPHOSPH10	9p-Amp	0.898	1
17q-Amp	8p-Del	0.898	1
20q-Amp	Del_5q22.2	0.898	1
2p-Amp	14q-Del	0.898	1
2q-Amp	14q-Del	0.898	1
17p-Del	Del_16p13.3	0.898	1
1p-Del	Del_10q21.1	0.898	1
22q-Del	Amp_6p21.1	0.898	1
Amp_6p21.1	Del_4p16.1	0.898	1
Amp_20p12.1	Del_4p16.1	0.898	1
Amp_20p11.21	Del_5q21.2	0.898	1
SELPLG	PRRG1	0.899	1
SELPLG	Amp_10q22.3	0.899	1
RHOA	MGA	0.899	1
ATXN3L	RB1	0.899	1
MVK	C2orf29	0.899	1
PRRG1	C2orf29	0.899	1
C2orf29	Amp_10q22.3	0.899	1
RB1	L1TD1	0.899	1
ZNF486	Del_5q12.1	0.899	1
14q-Del	Del_3p14.2	0.899	1
8p-Del	Amp_5p12	0.899	1
Amp_1q31.1	Del_1p36.11	0.899	1
Amp_10q22.3	Del_16p13.3	0.899	1
Amp_10q22.3	Del_21q21.1	0.899	1
APC	L1TD1	0.9	1
APC	5q-Del	0.9	1
APC	Amp_19q12	0.9	1
TXNDC2	CHUK	0.9	1
TXNDC2	Del_4q35.1	0.9	1
MLH1	IDH1	0.9	1
SMAD2	PLEKHF2	0.9	1
FMN2	ATXN3L	0.9	1
STARD3NL	Del_1p33	0.9	1
RHOA	Del_22q13.32	0.9	1
PRPS1	Amp_12p13.33	0.9	1
12p-Amp	17q-Amp	0.9	1
6p-Amp	Amp_20q12	0.9	1
Amp_15q26.1	Amp_20q12	0.9	1
Del_5q22.2	Del_14q11.2	0.9	1
ARID1A	Del_6p25.3	0.901	1
CRIPAK	ROS1	0.901	1
CRIPAK	SLC26A8	0.901	1
CRIPAK	ALDH1A3	0.901	1
CRIPAK	Del_16p13.3	0.901	1
SOX9	PTEN	0.901	1
TXNDC2	FAM9A	0.901	1
TXNDC2	THOC7	0.901	1
TXNDC2	GRB2	0.901	1
SMAD2	Amp_5p12	0.901	1
FAM9A	TOP2B	0.901	1
ST3GAL6	Amp_8p11.21	0.901	1
RSPH3	TOP2B	0.901	1
VCX2	Amp_8p11.21	0.901	1
17q-Amp	Del_18q12.2	0.901	1
Amp_2q33.1	Del_3p14.2	0.901	1
Del_10q25.2	Del_14q11.2	0.901	1
APC	Del_1p13.2	0.902	1
FAM123B	PCBP1	0.902	1
CDH1	SELPLG	0.902	1
WNT1	C14orf184	0.902	1
GGT1	FBXW7	0.902	1
ALG12	C14orf184	0.902	1
2p-Amp	20p-Del	0.902	1
2q-Amp	20p-Del	0.902	1
20p-Del	Amp_15q26.1	0.902	1
Amp_2q33.1	Del_18q22.1	0.902	1
Amp_20p11.21	Del_7q31.1	0.902	1
Del_2q22.1	Del_18q21.2	0.902	1
ARID1A	BIRC3	0.903	1
CRIPAK	PRPS1	0.903	1
CRIPAK	PTGDR	0.903	1
FMN2	PRPS1	0.903	1
SELPLG	ASXL1	0.903	1
EGR1	ASXL1	0.903	1
ATXN3L	IFT57	0.903	1
ERBB2	Del_3p14.2	0.903	1
IQCD	5q-Del	0.903	1
IQCD	Del_3q26.31	0.903	1
ASXL1	ALDH1A3	0.903	1
IFT57	NEXN	0.903	1
IFT57	Amp_2q33.1	0.903	1
VCX2	Amp_20q13.12	0.903	1
RBPJ	8q-Amp	0.903	1
SLC12A6	IDH1	0.903	1
ZNF486	5q-Del	0.903	1
ZNF486	Amp_2q33.1	0.903	1
ZNF486	Del_3q26.31	0.903	1
12q-Amp	Amp_20q11.21	0.903	1
20p-Del	8p-Del	0.903	1
Amp_8p11.21	Del_17q24.3	0.903	1
Amp_13q12.2	Del_5q12.1	0.903	1
Amp_17q24.1	Del_3p14.2	0.903	1
Amp_20p11.21	Del_2q22.1	0.903	1
TP53	Amp_20p12.1	0.904	1
GGT1	BCORL1	0.904	1
PRKDC	6p-Amp	0.904	1
FBXW7	KDM6A	0.904	1
FBXW7	Del_16q23.1	0.904	1
TPRKB	BCL9	0.904	1
TPRKB	SLC12A6	0.904	1
TPRKB	Amp_8q24.21	0.904	1
NLRC4	HIST1H1T	0.904	1
PLAGL2	2p-Amp	0.904	1
PLAGL2	2q-Amp	0.904	1
PLAGL2	6p-Amp	0.904	1
PLAGL2	Amp_15q26.1	0.904	1
VCX2	18q-Del	0.904	1
BCORL1	HIST1H1T	0.904	1
BCORL1	Del_5q22.2	0.904	1
GMNN	21q-Del	0.904	1
12q-Amp	Del_16q23.1	0.904	1
6p-Amp	Del_2p12	0.904	1
15q-Del	Amp_10q22.3	0.904	1
Amp_8p11.23	Del_3q26.31	0.904	1
Amp_13q12.2	Del_5q22.2	0.904	1
FAM123B	21q-Del	0.905	1
FAM123B	Del_5q21.2	0.905	1
TXNDC2	ERBB2	0.905	1
OR4D10	DDX26B	0.905	1
IQCD	12p-Amp	0.905	1
PIK3R1	Del_2q22.1	0.905	1
RBPJ	SMAD4	0.905	1
SMAD4	HLA-A	0.905	1
SMAD4	GMPS	0.905	1
13q-Amp	Del_21q21.1	0.905	1
Amp_1q31.1	Del_6q26	0.905	1
Amp_1q31.1	Del_19p13.3	0.905	1
Amp_15q26.1	Del_18q12.2	0.905	1
Amp_17q12	Del_1p36.11	0.905	1
Amp_17q24.1	Del_19p13.3	0.905	1
Amp_20q11.21	Del_8q11.1	0.905	1
APC	Del_22q13.32	0.906	1
ZFP36L2	P2RY13	0.906	1
ZFP36L2	DCLK2	0.906	1
ZFP36L2	FYN	0.906	1
B2M	STARD3NL	0.906	1
B2M	PCBP1	0.906	1
B2M	DCLK2	0.906	1
GGT1	ROS1	0.906	1
STARD3NL	RBPJ	0.906	1
STARD3NL	Del_8q11.1	0.906	1
RPTN	FYN	0.906	1
RPTN	BIRC3	0.906	1
NR1H3	RBPJ	0.906	1
NR1H3	HLA-A	0.906	1
DIP2B	1p-Del	0.906	1
PCBP1	RBPJ	0.906	1
PCBP1	GMPS	0.906	1
ROS1	HIST1H1T	0.906	1
RBPJ	DCLK2	0.906	1
DCLK2	16p-Amp	0.906	1
C14orf184	Del_1p33	0.906	1
BIRC3	16p-Amp	0.906	1
12p-Amp	Del_4q22.1	0.906	1
9p-Amp	Amp_12p13.33	0.906	1
9p-Amp	Del_10q23.31	0.906	1
21q-Del	Del_3p14.2	0.906	1
Amp_16p11.2	Del_3q26.31	0.906	1
SOX9	IDH1	0.907	1
ATXN3L	Del_5q12.1	0.907	1
ERBB2	P2RY13	0.907	1
ERBB2	BIRC3	0.907	1
ERBB2	16q-Amp	0.907	1
NR1H3	Amp_1q31.1	0.907	1
MPHOSPH10	8p-Amp	0.907	1
SMAD4	PTGDR	0.907	1
PRPS1	Del_5q22.2	0.907	1
12p-Amp	Amp_20q11.21	0.907	1
16q-Amp	Amp_1q31.1	0.907	1
Del_2p12	Del_5q12.1	0.907	1
APC	ST3GAL6	0.908	1
TP53	HIST1H1T	0.908	1
FMN2	Amp_10q22.3	0.908	1
OR4D10	Del_4p16.1	0.908	1
FAM9A	CHUK	0.908	1
THOC7	CHUK	0.908	1
THOC7	17p-Del	0.908	1
THOC7	Amp_8p11.23	0.908	1
CHUK	GRB2	0.908	1
MVK	MPHOSPH10	0.908	1
GRB2	Amp_6p21.1	0.908	1
GRB2	Amp_8p11.23	0.908	1
PRRG1	MPHOSPH10	0.908	1
RSPH3	Amp_6p21.1	0.908	1
MPHOSPH10	Amp_10q22.3	0.908	1
Amp_6p21.1	Del_2q22.1	0.908	1
Amp_8p11.23	Del_2q22.1	0.908	1
Del_10q23.31	Del_12p13.1	0.908	1
CRIPAK	Del_4q35.1	0.909	1
TXNDC2	PIK3R1	0.909	1
ACVR1B	MAPK6	0.909	1
ACVR1B	FKBP9	0.909	1
SELPLG	SETD2	0.909	1
MAPK6	KDM6A	0.909	1
SLC26A8	Del_16q23.1	0.909	1
ALDH1A3	SETD2	0.909	1
PRPS1	Del_16q23.1	0.909	1
PTGDR	KDM6A	0.909	1
PTGDR	Del_16q23.1	0.909	1
7p-Amp	Del_17q24.3	0.909	1
7q-Amp	9p-Amp	0.909	1
8q-Amp	Del_17q24.3	0.909	1
9p-Amp	Amp_20q13.12	0.909	1
14q-Del	Amp_16p11.2	0.909	1
15q-Del	Del_5q12.1	0.909	1
Del_2q22.1	Del_18q22.1	0.909	1
Del_3q26.31	Del_14q11.2	0.909	1
TP53	PRRG1	0.91	1
SOX9	RHOA	0.91	1
GGT1	22q-Del	0.91	1
GGT1	Del_4p16.1	0.91	1
ASXL1	NLRC4	0.91	1
L1TD1	PTEN	0.91	1
PTEN	NEXN	0.91	1
PRPS1	GMNN	0.91	1
GMNN	Del_7q31.1	0.91	1
Amp_2q33.1	Del_18p11.31	0.91	1
Amp_5p12	Del_18q21.2	0.91	1
Amp_6p21.1	Amp_13q22.1	0.91	1
Amp_11p15.5	Del_1p33	0.91	1
Amp_12p13.33	Amp_20q13.12	0.91	1
ARID1A	ACVR1B	0.911	1
ARID1A	MAPK6	0.911	1
ZFP36L2	12q-Amp	0.911	1
ZFP36L2	Del_10q21.1	0.911	1
TXNDC2	SMAD2	0.911	1
TXNDC2	Del_12p13.1	0.911	1
SMAD2	Del_19p13.3	0.911	1
SELPLG	RHOA	0.911	1
MAPK6	IFT57	0.911	1
RHOA	FKBP9	0.911	1
RHOA	ALDH1A3	0.911	1
IQCD	SLC26A8	0.911	1
PLAGL2	12p-Amp	0.911	1
IFT57	Del_16p13.3	0.911	1
C2orf29	ZNF486	0.911	1
RBPJ	12q-Amp	0.911	1
RBPJ	9p-Amp	0.911	1
RB1	12q-Amp	0.911	1
Amp_12p13.33	Del_8p22	0.911	1
Amp_15q26.1	Del_15q22.33	0.911	1
Del_15q11.2	Del_16q23.1	0.911	1
ZFP36L2	PIK3R1	0.912	1
SELPLG	15q-Del	0.912	1
PIK3R1	16p-Amp	0.912	1
VCX2	14q-Del	0.912	1
C2orf29	Amp_12p13.33	0.912	1
ALDH1A3	Amp_12p13.33	0.912	1
17q-Amp	Amp_5p12	0.912	1
2q-Amp	9p-Amp	0.912	1
6p-Amp	Amp_20q11.21	0.912	1
17p-Del	Amp_17q12	0.912	1
Amp_15q26.1	Amp_20q11.21	0.912	1
CRIPAK	RLIM	0.913	1
CRIPAK	MPHOSPH10	0.913	1
TXNDC2	BMPR2	0.913	1
BCOR	Del_16q23.1	0.913	1
STARD3NL	BMPR2	0.913	1
STARD3NL	Del_10q25.2	0.913	1
DIP2B	KDM6A	0.913	1
BMPR2	FYN	0.913	1
LARP4B	Del_16q23.1	0.913	1
12p-Amp	Del_21q21.1	0.913	1
18p-Del	Amp_8p11.23	0.913	1
Amp_6p21.1	Amp_13q12.2	0.913	1
Amp_8q24.21	Del_16p13.3	0.913	1
Amp_13q12.2	Amp_17q24.1	0.913	1
Amp_20q13.12	Del_12p13.1	0.913	1
Del_1p36.11	Del_10q25.2	0.913	1
Del_4p16.1	Del_12p13.1	0.913	1
Del_7q31.1	Del_17p12	0.913	1
APC	PIK3R1	0.914	1
FAM123B	PTGDR	0.914	1
GGT1	21q-Del	0.914	1
ATXN3L	BCORL1	0.914	1
ATXN3L	SLC12A6	0.914	1
ATXN3L	Amp_11p15.5	0.914	1
ATXN3L	Del_1p13.2	0.914	1
PIK3R1	GMNN	0.914	1
BCORL1	NEXN	0.914	1
CDK12	8p-Amp	0.914	1
HIST1H1T	21q-Del	0.914	1
GMNN	18p-Del	0.914	1
CTNNB1	12p-Amp	0.914	1
CTNNB1	Amp_11p15.5	0.914	1
12q-Amp	Amp_16p11.2	0.914	1
13q-Amp	Del_5q22.2	0.914	1
7q-Amp	Del_12p13.1	0.914	1
4q-Del	Del_3q26.31	0.914	1
Amp_1q31.1	Amp_8q24.21	0.914	1
Del_1p13.2	Del_3q26.31	0.914	1
APC	MAP4K3	0.915	1
SOX9	PLAGL2	0.915	1
SMAD2	FAM9A	0.915	1
PRKDC	16p-Amp	0.915	1
THOC7	Del_15q15.2	0.915	1
ALG12	BMPR2	0.915	1
ALG12	Del_10q25.2	0.915	1
RSPH3	Del_12p13.1	0.915	1
SMAD4	Amp_10q22.3	0.915	1
C14orf184	BMPR2	0.915	1
12p-Amp	Del_16q23.1	0.915	1
18p-Del	Del_16p13.3	0.915	1
4p-Del	Amp_5p12	0.915	1
Amp_8p11.21	Del_12p13.1	0.915	1
Amp_8q24.21	Del_10q21.1	0.915	1
Amp_20q12	Del_5q23.3	0.915	1
Del_1p13.2	Del_16q23.1	0.915	1
Del_2p12	Del_5q23.3	0.915	1
Del_2q22.1	Del_15q15.2	0.915	1
Del_10q23.31	Del_14q11.2	0.915	1
TP53	1p-Del	0.916	1
FAM123B	BCL9	0.916	1
FAM123B	BCORL1	0.916	1
TXNDC2	HIST1H1T	0.916	1
WNT1	Del_2p12	0.916	1
FMN2	MGA	0.916	1
STARD3NL	DDX26B	0.916	1
OR4D10	P2RY13	0.916	1
OR4D10	NR1H3	0.916	1
OR4D10	16q-Amp	0.916	1
ATXN3L	PLEKHF2	0.916	1
TPRKB	TOP2B	0.916	1
TPRKB	Del_6p25.3	0.916	1
BCL9	SETD2	0.916	1
PLEKHF2	L1TD1	0.916	1
PLEKHF2	NEXN	0.916	1
ALG12	Del_2p12	0.916	1
PLAGL2	C14orf184	0.916	1
DIP2B	Del_10q23.31	0.916	1
VCX2	5q-Del	0.916	1
VCX2	Amp_2q33.1	0.916	1
VCX2	Amp_19q12	0.916	1
DDX26B	FYN	0.916	1
DDX26B	BIRC3	0.916	1
TOP2B	HIST1H1T	0.916	1
C14orf184	Del_2p12	0.916	1
HIST1H1T	Del_6p25.3	0.916	1
21q-Del	Del_5q12.1	0.916	1
Del_3p14.2	Del_15q21.1	0.916	1
CRIPAK	NF1	0.917	1
TP53	MLH1	0.917	1
MAPK6	Amp_16p11.2	0.917	1
RPTN	MVK	0.917	1
NF1	8p-Amp	0.917	1
CHUK	ERBB2	0.917	1
MVK	Del_8q11.1	0.917	1
ST3GAL6	PTCH1	0.917	1
PLEKHF2	RB1	0.917	1
DIP2B	6p-Amp	0.917	1
PRRG1	GMPS	0.917	1
PRRG1	Del_8q11.1	0.917	1
RBBP7	Amp_10q22.3	0.917	1
16p-Amp	Amp_10q22.3	0.917	1
8p-Del	Del_7q31.1	0.917	1
Amp_17q24.1	Del_3p26.3	0.917	1
Amp_17q24.1	Del_18q12.2	0.917	1
Amp_20q12	Del_19p13.3	0.917	1
Del_3p14.2	Del_5q12.1	0.917	1
B2M	DIP2B	0.918	1
BCOR	RBPJ	0.918	1
BCOR	RBBP7	0.918	1
EGR1	MGA	0.918	1
THOC7	4p-Del	0.918	1
ASXL1	RLIM	0.918	1
ASXL1	Del_5q23.3	0.918	1
DIP2B	RBPJ	0.918	1
VCX2	Del_5q12.1	0.918	1
RBPJ	LARP4B	0.918	1
RBBP7	Del_17q24.3	0.918	1
16p-Amp	Del_17q24.3	0.918	1
1p-Del	Amp_17q12	0.918	1
8p-Del	Del_6p25.3	0.918	1
Del_1p36.11	Del_2q22.1	0.918	1
CDH1	MVK	0.919	1
SMAD2	CHUK	0.919	1
PRKDC	VCX2	0.919	1
IQCD	RLIM	0.919	1
C11orf30	Del_12p13.1	0.919	1
RLIM	ZNF486	0.919	1
GMNN	2p-Amp	0.919	1
GMNN	2q-Amp	0.919	1
GMNN	6p-Amp	0.919	1
16q-Amp	Del_14q11.2	0.919	1
5q-Del	8p-Del	0.919	1
Amp_1q31.1	Amp_11p15.5	0.919	1
Amp_10q22.3	Del_8p23.2	0.919	1
Del_3p26.3	Del_12p13.1	0.919	1
CRIPAK	TP53	0.92	1
CRIPAK	Del_4q22.1	0.92	1
SOX9	ATXN3L	0.92	1
SOX9	L1TD1	0.92	1
SOX9	NEXN	0.92	1
SOX9	Amp_2q33.1	0.92	1
PRKDC	Amp_16p11.2	0.92	1
BCL9	PRPS1	0.92	1
BCL9	PTGDR	0.92	1
BCL9	Del_7q31.1	0.92	1
NR1H3	ROS1	0.92	1
PCBP1	ROS1	0.92	1
RLIM	KDM6A	0.92	1
MPHOSPH10	KDM6A	0.92	1
MAP4K3	Del_6p25.3	0.92	1
SLC12A6	PRPS1	0.92	1
GMNN	8p-Amp	0.92	1
17q-Amp	Del_6q26	0.92	1
17p-Del	Del_2p12	0.92	1
1p-Del	Del_16q23.1	0.92	1
Del_3q26.31	Del_5q23.3	0.92	1
Del_6p25.3	Del_15q21.1	0.92	1
SELPLG	MGA	0.921	1
MGA	C2orf29	0.921	1
PRRG1	Amp_1q31.1	0.921	1
GMNN	Del_17p12	0.921	1
16q-Amp	Del_17p12	0.921	1
20q-Amp	6p-Amp	0.921	1
20q-Amp	Amp_15q26.1	0.921	1
8p-Amp	Del_6p25.3	0.921	1
1p-Del	Amp_13q12.13	0.921	1
Amp_1q31.1	Amp_10q22.3	0.921	1
Del_1p33	Del_12p13.1	0.921	1
FAM123B	PTEN	0.922	1
ZFP36L2	8p-Amp	0.922	1
NF2	Del_16q23.1	0.922	1
FAM9A	MAP4K3	0.922	1
FAM9A	IDH1	0.922	1
EGR1	12p-Amp	0.922	1
THOC7	ZBTB20	0.922	1
THOC7	MAP4K3	0.922	1
THOC7	IDH1	0.922	1
CHUK	PIK3R1	0.922	1
TPRKB	C11orf30	0.922	1
TPRKB	Amp_6p21.1	0.922	1
ZBTB20	RSPH3	0.922	1
ST3GAL6	12p-Amp	0.922	1
PLEKHF2	Amp_11p15.5	0.922	1
PLEKHF2	Del_22q13.32	0.922	1
PCBP1	Amp_20p12.1	0.922	1
RSPH3	17q-Amp	0.922	1
RSPH3	Amp_17q12	0.922	1
ROS1	IDH1	0.922	1
VCX2	Del_1p13.2	0.922	1
RBPJ	8p-Amp	0.922	1
SMAD4	Del_10q23.31	0.922	1
PTEN	PTGDR	0.922	1
MAP4K3	Del_2q22.1	0.922	1
12q-Amp	20q-Amp	0.922	1
13q-Amp	Amp_12p13.33	0.922	1
20q-Amp	9p-Amp	0.922	1
15q-Del	Del_6p25.3	0.922	1
Amp_11p15.5	Amp_13q22.1	0.922	1
Amp_12p13.33	Del_6q26	0.922	1
Amp_16p11.2	Del_17q24.3	0.922	1
Del_3p14.2	Del_15q15.2	0.922	1
Del_5q22.2	Del_16p13.3	0.922	1
RNF43	GMNN	0.923	1
TXNDC2	FBXW7	0.923	1
SELPLG	PLEKHF2	0.923	1
OR4D10	8p-Del	0.923	1
EGR1	ALDH1A3	0.923	1
NF1	2q-Amp	0.923	1
BCL9	9p-Amp	0.923	1
PLEKHF2	C2orf29	0.923	1
PLEKHF2	SLC26A8	0.923	1
PLEKHF2	FKBP9	0.923	1
NLRC4	9p-Amp	0.923	1
VCX2	C2orf29	0.923	1
VCX2	FKBP9	0.923	1
C14orf184	20p-Del	0.923	1
SLC12A6	Del_3p14.2	0.923	1
CTNNB1	8p-Del	0.923	1
CTNNB1	Del_1p33	0.923	1
17q-Amp	14q-Del	0.923	1
21q-Del	Amp_13q22.1	0.923	1
Amp_8p11.23	Del_16p13.3	0.923	1
Amp_20p12.1	Del_15q21.1	0.923	1
Amp_20q13.12	Del_5q22.2	0.923	1
Del_6p25.3	Del_18p11.31	0.923	1
APC	Del_8p22	0.924	1
ZFP36L2	Del_15q22.33	0.924	1
MAPK6	BCORL1	0.924	1
CHUK	BMPR2	0.924	1
NLRC4	C2orf29	0.924	1
FYN	20p-Del	0.924	1
ALDH1A3	SLC12A6	0.924	1
13q-Amp	Del_5q23.3	0.924	1
7q-Amp	Del_4q35.1	0.924	1
Del_2q22.1	Del_18p11.31	0.924	1
APC	IFT57	0.925	1
ARID1A	TPRKB	0.925	1
ARID1A	ASXL1	0.925	1
CRIPAK	HLA-A	0.925	1
TP53	Del_5q12.1	0.925	1
FMN2	Amp_1q31.1	0.925	1
STARD3NL	NR1H3	0.925	1
STARD3NL	PCBP1	0.925	1
STARD3NL	DCLK2	0.925	1
STARD3NL	GPATCH8	0.925	1
STARD3NL	22q-Del	0.925	1
OR4D10	MVK	0.925	1
MAPK6	SMAD4	0.925	1
FBXW7	DCLK2	0.925	1
FBXW7	BIRC3	0.925	1
P2RY13	FYN	0.925	1
P2RY13	BIRC3	0.925	1
PCBP1	DCLK2	0.925	1
PCBP1	FYN	0.925	1
C2orf29	SMAD4	0.925	1
DCLK2	16q-Amp	0.925	1
PRPS1	CTNNB1	0.925	1
BIRC3	16q-Amp	0.925	1
HIST1H1T	Del_15q11.2	0.925	1
12p-Amp	21q-Del	0.925	1
13q-Amp	Del_5q21.2	0.925	1
16p-Amp	Del_17p12	0.925	1
17q-Amp	Del_18q21.2	0.925	1
Amp_10q22.3	Del_18q21.2	0.925	1
Amp_13q22.1	Del_10q21.1	0.925	1
Del_1p13.2	Del_3p14.2	0.925	1
APC	Amp_20p11.21	0.926	1
TP53	Del_15q21.1	0.926	1
SMAD2	CREBBP	0.926	1
NF1	Amp_12p13.33	0.926	1
PLEKHF2	CREBBP	0.926	1
ALPK2	GMNN	0.926	1
ASXL1	GMNN	0.926	1
VCX2	CREBBP	0.926	1
ALDH1A3	12p-Amp	0.926	1
PRPS1	Amp_5p12	0.926	1
12p-Amp	Amp_13q12.2	0.926	1
14q-Del	Amp_20p12.1	0.926	1
15q-Del	Amp_15q26.1	0.926	1
18q-Del	Amp_5p12	0.926	1
20p-Del	Amp_8q24.21	0.926	1
21q-Del	Del_16q23.1	0.926	1
Amp_6p21.1	Del_18q22.1	0.926	1
Amp_8q24.21	Del_15q21.1	0.926	1
Amp_12p13.33	Amp_15q26.1	0.926	1
APC	Del_15q15.2	0.927	1
RNF43	RPTN	0.927	1
ZFP36L2	IQCD	0.927	1
B2M	ZNF486	0.927	1
CDH1	SMAD2	0.927	1
WNT1	CDK12	0.927	1
RHOA	RBPJ	0.927	1
RPTN	IQCD	0.927	1
RPTN	IFT57	0.927	1
RPTN	4p-Del	0.927	1
FBXW7	DIP2B	0.927	1
IQCD	HLA-A	0.927	1
PLAGL2	Del_2p12	0.927	1
RBPJ	ZNF486	0.927	1
HLA-A	ZNF486	0.927	1
GMPS	ZNF486	0.927	1
ZNF486	16p-Amp	0.927	1
GMNN	Del_18p11.31	0.927	1
20p-Amp	Del_3p26.3	0.927	1
18p-Del	Amp_5p12	0.927	1
Amp_6p21.1	Del_8p23.2	0.927	1
Del_8p23.2	Del_10q25.2	0.927	1
Del_14q11.2	Del_16p13.3	0.927	1
B2M	NF2	0.928	1
SMAD2	HIST1H1T	0.928	1
FAM9A	NEXN	0.928	1
FAM9A	Amp_2q33.1	0.928	1
THOC7	ATXN3L	0.928	1
THOC7	L1TD1	0.928	1
THOC7	Del_3q26.31	0.928	1
CHUK	ZBTB20	0.928	1
ATXN3L	Del_2q22.1	0.928	1
GRB2	Amp_19q12	0.928	1
GRB2	Del_3q26.31	0.928	1
RSPH3	SMAD4	0.928	1
RSPH3	Amp_2q33.1	0.928	1
RSPH3	Del_3q26.31	0.928	1
ROS1	PRPS1	0.928	1
ROS1	Del_7q31.1	0.928	1
L1TD1	Del_2q22.1	0.928	1
CTNNB1	Amp_12p13.33	0.928	1
5q-Del	Del_2q22.1	0.928	1
Amp_2q33.1	Del_2q22.1	0.928	1
Amp_13q12.2	Del_5q21.2	0.928	1
Amp_19q12	Del_2q22.1	0.928	1
Del_1p13.2	Del_10q25.2	0.928	1
TXNDC2	NEXN	0.929	1
ACVR1B	KDM6A	0.929	1
WNT1	GMNN	0.929	1
FBXW7	ST3GAL6	0.929	1
FBXW7	PLEKHF2	0.929	1
ATXN3L	Del_6p25.3	0.929	1
ATXN3L	Del_19p13.3	0.929	1
NR1H3	PTCH1	0.929	1
ALG12	GMNN	0.929	1
PTCH1	DCLK2	0.929	1
PTCH1	FYN	0.929	1
PIK3R1	Del_3p14.2	0.929	1
L1TD1	Del_6p25.3	0.929	1
C14orf184	GMNN	0.929	1
SETD2	GMNN	0.929	1
BIRC3	21q-Del	0.929	1
20p-Amp	Del_4q22.1	0.929	1
9p-Amp	Amp_17q24.1	0.929	1
14q-Del	Amp_17q24.1	0.929	1
Amp_8p11.21	Amp_17q24.1	0.929	1
Amp_11p15.5	Del_21q11.2	0.929	1
Amp_19q12	Del_19p13.3	0.929	1
Del_3q26.31	Del_6q26	0.929	1
ARID1A	ERBB2	0.93	1
FAM123B	MAPK6	0.93	1
FAM123B	ALDH1A3	0.93	1
MLH1	SLC26A8	0.93	1
RHOA	Del_1p33	0.93	1
FAM9A	Del_3p14.2	0.93	1
ATXN3L	ATM	0.93	1
PLEKHF2	RLIM	0.93	1
NLRC4	DIP2B	0.93	1
DIP2B	BCORL1	0.93	1
PCBP1	ATM	0.93	1
RSPH3	Del_3p14.2	0.93	1
RLIM	VCX2	0.93	1
VCX2	1p-Del	0.93	1
FYN	ATM	0.93	1
CDK12	16q-Amp	0.93	1
ATM	16q-Amp	0.93	1
20p-Amp	Del_15q11.2	0.93	1
Amp_6p21.1	Del_21q21.1	0.93	1
APC	Del_17p12	0.931	1
CRIPAK	Amp_12p13.33	0.931	1
ZFP36L2	ACVR1B	0.931	1
TXNDC2	PRPS1	0.931	1
TXNDC2	PTGDR	0.931	1
TXNDC2	Del_7q31.1	0.931	1
ACVR1B	RPTN	0.931	1
ACVR1B	RBBP7	0.931	1
ACVR1B	HLA-A	0.931	1
WNT1	9p-Amp	0.931	1
RPTN	KDM6A	0.931	1
ATXN3L	Del_10q23.31	0.931	1
PCBP1	PTEN	0.931	1
RBBP7	Del_16q23.1	0.931	1
TOP2B	PRPS1	0.931	1
PTEN	FYN	0.931	1
C14orf184	9p-Amp	0.931	1
PRPS1	Del_6p25.3	0.931	1
15q-Del	Amp_8q24.21	0.931	1
17p-Del	Amp_8p11.21	0.931	1
5q-Del	Del_10q23.31	0.931	1
Amp_1q31.1	Del_5q22.2	0.931	1
Amp_6p21.1	Amp_8p11.23	0.931	1
Del_6p25.3	Del_7q31.1	0.931	1
Del_8q11.1	Del_16q23.1	0.931	1
Del_10q21.1	Del_21q11.2	0.931	1
SOX9	SLC26A8	0.932	1
FMN2	FBXW7	0.932	1
FMN2	RLIM	0.932	1
RPTN	ALPK2	0.932	1
RPTN	ASXL1	0.932	1
IDH1	7q-Amp	0.932	1
13q-Amp	Del_5q12.1	0.932	1
6p-Amp	Del_5q22.2	0.932	1
4q-Del	Amp_20p12.1	0.932	1
Amp_10q22.3	Del_18q22.1	0.932	1
CRIPAK	PIK3R1	0.933	1
WNT1	PRKDC	0.933	1
GGT1	Amp_8p11.23	0.933	1
TPRKB	8p-Amp	0.933	1
17q-Amp	Del_18q22.1	0.933	1
8p-Amp	Amp_6p21.1	0.933	1
17p-Del	Amp_15q26.1	0.933	1
Amp_8p11.23	Del_18p11.31	0.933	1
Amp_8q24.21	Del_3p26.3	0.933	1
TP53	BIRC3	0.934	1
TP53	16q-Amp	0.934	1
GGT1	ZBTB20	0.934	1
GGT1	IDH1	0.934	1
GGT1	17q-Amp	0.934	1
STARD3NL	Amp_10q22.3	0.934	1
MAPK6	RSPH3	0.934	1
THOC7	FKBP9	0.934	1
THOC7	ALDH1A3	0.934	1
FBXW7	Amp_8q24.21	0.934	1
MGA	Del_2q22.1	0.934	1
TPRKB	ZBTB20	0.934	1
TPRKB	MAP4K3	0.934	1
MVK	FYN	0.934	1
MVK	BIRC3	0.934	1
ERBB2	PIK3R1	0.934	1
P2RY13	PRRG1	0.934	1
ALG12	8q-Amp	0.934	1
GRB2	SLC26A8	0.934	1
PRRG1	PCBP1	0.934	1
PRRG1	DCLK2	0.934	1
PRRG1	BIRC3	0.934	1
RSPH3	SLC26A8	0.934	1
RSPH3	ALDH1A3	0.934	1
RLIM	SLC12A6	0.934	1
C2orf29	Del_2q22.1	0.934	1
FKBP9	Del_2q22.1	0.934	1
LARP4B	8p-Amp	0.934	1
HIST1H1T	IDH1	0.934	1
12p-Amp	20p-Amp	0.934	1
20p-Amp	4p-Del	0.934	1
Amp_11p15.5	Del_8p23.2	0.934	1
Amp_20p12.1	Del_15q15.2	0.934	1
Amp_20q11.21	Del_19p13.3	0.934	1
Del_2q22.1	Del_16p13.3	0.934	1
Del_2q22.1	Del_18q12.2	0.934	1
Del_12p13.1	Del_15q11.2	0.934	1
SOX9	BMPR2	0.935	1
BCOR	ALG12	0.935	1
STARD3NL	Del_10q21.1	0.935	1
OR4D10	IQCD	0.935	1
RHOA	DDX26B	0.935	1
MVK	Amp_8p11.23	0.935	1
P2RY13	Del_10q21.1	0.935	1
NR1H3	12q-Amp	0.935	1
NR1H3	Del_10q21.1	0.935	1
ALG12	DIP2B	0.935	1
DIP2B	C14orf184	0.935	1
PRRG1	Amp_8p11.23	0.935	1
RB1	GMNN	0.935	1
DCLK2	12q-Amp	0.935	1
PTEN	GMPS	0.935	1
C14orf184	LARP4B	0.935	1
8p-Amp	Del_5q21.2	0.935	1
8p-Del	Amp_6p21.1	0.935	1
Amp_13q12.2	Del_10q25.2	0.935	1
Del_8q11.1	Del_18p11.31	0.935	1
Del_15q15.2	Del_16q23.1	0.935	1
CRIPAK	FMN2	0.936	1
RNF43	TPRKB	0.936	1
TP53	NF2	0.936	1
SMAD2	IDH1	0.936	1
GGT1	4p-Del	0.936	1
CHUK	PRPS1	0.936	1
PTCH1	2p-Amp	0.936	1
PTCH1	6p-Amp	0.936	1
NLRC4	2p-Amp	0.936	1
NLRC4	6p-Amp	0.936	1
C11orf30	PTGDR	0.936	1
C11orf30	Amp_2q33.1	0.936	1
BCORL1	2p-Amp	0.936	1
BCORL1	6p-Amp	0.936	1
BCORL1	Amp_15q26.1	0.936	1
HIST1H1T	Del_15q21.1	0.936	1
13q-Amp	Del_10q21.1	0.936	1
17q-Amp	Del_12p13.1	0.936	1
1p-Del	Del_8p23.2	0.936	1
Amp_6p21.1	Del_7q31.1	0.936	1
TP53	Amp_8p11.23	0.937	1
ZFP36L2	ST3GAL6	0.937	1
B2M	ST3GAL6	0.937	1
GGT1	ATM	0.937	1
EGR1	GMPS	0.937	1
RPTN	VCX2	0.937	1
ERBB2	IDH1	0.937	1
ST3GAL6	HLA-A	0.937	1
PLEKHF2	GMPS	0.937	1
VCX2	HLA-A	0.937	1
PRPS1	7q-Amp	0.937	1
PTGDR	7q-Amp	0.937	1
20q-Amp	Del_5q21.2	0.937	1
6p-Amp	Amp_13q12.13	0.937	1
20p-Del	Amp_10q22.3	0.937	1
FAM123B	RHOA	0.938	1
FAM123B	IQCD	0.938	1
TXNDC2	SELPLG	0.938	1
TXNDC2	SLC26A8	0.938	1
CDH1	DIP2B	0.938	1
MLH1	IFT57	0.938	1
FAM9A	12p-Amp	0.938	1
THOC7	Del_1p13.2	0.938	1
FBXW7	PRPS1	0.938	1
ALG12	CREBBP	0.938	1
MPHOSPH10	12p-Amp	0.938	1
FKBP9	Del_6p25.3	0.938	1
HIST1H1T	Del_15q15.2	0.938	1
14q-Del	Del_3q26.31	0.938	1
4p-Del	Amp_6p21.1	0.938	1
4q-Del	Amp_20p11.21	0.938	1
8p-Del	Del_16p13.3	0.938	1
Amp_8q24.21	Del_15q15.2	0.938	1
Amp_13q22.1	Del_3q26.31	0.938	1
Del_1p13.2	Del_2q22.1	0.938	1
Del_6p25.3	Del_16p13.3	0.938	1
APC	CHUK	0.939	1
APC	PRRG1	0.939	1
APC	Amp_10q22.3	0.939	1
APC	Amp_20p12.1	0.939	1
CRIPAK	WNT1	0.939	1
CRIPAK	ALG12	0.939	1
GGT1	Amp_17q12	0.939	1
RHOA	BMPR2	0.939	1
RHOA	Del_10q25.2	0.939	1
PRKDC	Del_2q22.1	0.939	1
TPRKB	ASXL1	0.939	1
PLAGL2	GMNN	0.939	1
VCX2	CTNNB1	0.939	1
SLC26A8	PTEN	0.939	1
PTEN	ALDH1A3	0.939	1
IDH1	CREBBP	0.939	1
GMNN	Del_2p12	0.939	1
9p-Amp	Amp_20q12	0.939	1
18q-Del	Del_2p12	0.939	1
1p-Del	Amp_13q12.2	0.939	1
Amp_8p11.23	Amp_16p11.2	0.939	1
Amp_12p13.33	Del_4q22.1	0.939	1
Amp_20q12	Del_16p13.3	0.939	1
APC	Del_5q21.2	0.94	1
CRIPAK	Del_5q22.2	0.94	1
FAM123B	TOP2B	0.94	1
SOX9	NLRC4	0.94	1
B2M	CDH1	0.94	1
TXNDC2	MLH1	0.94	1
BCOR	STARD3NL	0.94	1
BCOR	NR1H3	0.94	1
BCOR	FYN	0.94	1
GGT1	ATXN3L	0.94	1
GGT1	5q-Del	0.94	1
GGT1	Amp_2q33.1	0.94	1
GGT1	Amp_19q12	0.94	1
TPRKB	L1TD1	0.94	1
TPRKB	NEXN	0.94	1
TPRKB	Del_3q26.31	0.94	1
P2RY13	Del_17q24.3	0.94	1
PLAGL2	Amp_8p11.23	0.94	1
PCBP1	LARP4B	0.94	1
RBBP7	Del_3p14.2	0.94	1
L1TD1	HIST1H1T	0.94	1
TOP2B	12q-Amp	0.94	1
NEXN	HIST1H1T	0.94	1
16q-Amp	Del_17q24.3	0.94	1
2p-Amp	Amp_5p12	0.94	1
2q-Amp	Amp_5p12	0.94	1
9p-Amp	Del_6p25.3	0.94	1
Amp_2q33.1	Amp_13q12.2	0.94	1
Amp_5p12	Amp_15q26.1	0.94	1
Del_3p14.2	Del_8q11.1	0.94	1
Del_6q26	Del_10q21.1	0.94	1
APC	Amp_8p11.23	0.941	1
TP53	Del_3p26.3	0.941	1
OR4D10	KDM6A	0.941	1
NF2	ALG12	0.941	1
NF2	C14orf184	0.941	1
FAM9A	RLIM	0.941	1
GRB2	1p-Del	0.941	1
PIK3R1	DCLK2	0.941	1
PIK3R1	16q-Amp	0.941	1
RSPH3	MPHOSPH10	0.941	1
DDX26B	Del_16q23.1	0.941	1
HIST1H1T	Del_1p36.11	0.941	1
12p-Amp	Amp_13q12.13	0.941	1
17p-Del	Del_3q26.31	0.941	1
1p-Del	Del_2q22.1	0.941	1
21q-Del	Amp_20p11.21	0.941	1
SOX9	FAM9A	0.942	1
ZFP36L2	15q-Del	0.942	1
STARD3NL	IQCD	0.942	1
STARD3NL	ZNF486	0.942	1
RHOA	P2RY13	0.942	1
RHOA	NR1H3	0.942	1
RHOA	PCBP1	0.942	1
RHOA	FYN	0.942	1
RHOA	GPATCH8	0.942	1
EGR1	Amp_12p13.33	0.942	1
RPTN	ATM	0.942	1
THOC7	PTCH1	0.942	1
FBXW7	C11orf30	0.942	1
FBXW7	SLC12A6	0.942	1
BCL9	CREBBP	0.942	1
P2RY13	ZNF486	0.942	1
IQCD	NR1H3	0.942	1
IQCD	PCBP1	0.942	1
IQCD	DCLK2	0.942	1
NR1H3	ZNF486	0.942	1
GRB2	RB1	0.942	1
PCBP1	ZNF486	0.942	1
VCX2	15q-Del	0.942	1
DCLK2	ZNF486	0.942	1
BIRC3	ZNF486	0.942	1
ZNF486	16q-Amp	0.942	1
16q-Amp	14q-Del	0.942	1
20p-Amp	Del_3p14.2	0.942	1
5q-Del	Del_1p33	0.942	1
Amp_8p11.23	Del_5q23.3	0.942	1
Del_1p33	Del_3q26.31	0.942	1
Del_2q22.1	Del_22q13.32	0.942	1
Del_3p14.2	Del_18q21.2	0.942	1
Del_8p23.2	Del_21q21.1	0.942	1
CRIPAK	FBXW7	0.943	1
SOX9	MPHOSPH10	0.943	1
TXNDC2	Del_3p14.2	0.943	1
ACVR1B	ALG12	0.943	1
WNT1	Del_16q23.1	0.943	1
NF2	MAP4K3	0.943	1
NF2	IDH1	0.943	1
RPTN	BCL9	0.943	1
RPTN	SLC12A6	0.943	1
FBXW7	ATXN3L	0.943	1
BCL9	GMPS	0.943	1
ASXL1	C11orf30	0.943	1
SMAD4	CDK12	0.943	1
C14orf184	KDM6A	0.943	1
BMPR2	IDH1	0.943	1
BCORL1	GMPS	0.943	1
MAP4K3	IDH1	0.943	1
1p-Del	Del_5q23.3	0.943	1
1p-Del	Del_15q21.1	0.943	1
20p-Del	Del_2p12	0.943	1
21q-Del	Amp_10q22.3	0.943	1
4q-Del	Amp_20q13.12	0.943	1
Amp_6p21.1	Del_1p36.11	0.943	1
Amp_17q12	Del_3p26.3	0.943	1
Amp_19q12	Del_12p13.1	0.943	1
Del_3p14.2	Del_19p13.3	0.943	1
Del_3q26.31	Del_12p13.1	0.943	1
MLH1	RLIM	0.944	1
MLH1	MPHOSPH10	0.944	1
GGT1	17p-Del	0.944	1
SELPLG	C11orf30	0.944	1
OR4D10	PLEKHF2	0.944	1
OR4D10	VCX2	0.944	1
MAPK6	Amp_6p21.1	0.944	1
FBXW7	CDK12	0.944	1
CHUK	FKBP9	0.944	1
BCL9	KDM6A	0.944	1
IQCD	SMAD4	0.944	1
ASXL1	DDX26B	0.944	1
NLRC4	KDM6A	0.944	1
PIK3R1	PTGDR	0.944	1
PIK3R1	Del_7q31.1	0.944	1
VCX2	DDX26B	0.944	1
C14orf184	Amp_8q24.21	0.944	1
20q-Amp	Del_5q12.1	0.944	1
4q-Del	Amp_5p12	0.944	1
Amp_6p21.1	Del_16p13.3	0.944	1
ARID1A	IFT57	0.945	1
ARID1A	ZNF486	0.945	1
CRIPAK	STARD3NL	0.945	1
CRIPAK	GPATCH8	0.945	1
CRIPAK	BIRC3	0.945	1
TXNDC2	Amp_15q26.1	0.945	1
FMN2	ST3GAL6	0.945	1
GGT1	SLC26A8	0.945	1
GGT1	Del_16p13.3	0.945	1
SELPLG	TPRKB	0.945	1
SELPLG	HIST1H1T	0.945	1
MAPK6	HIST1H1T	0.945	1
FAM9A	CREBBP	0.945	1
RPTN	FBXW7	0.945	1
THOC7	Del_15q22.33	0.945	1
FBXW7	RBPJ	0.945	1
TPRKB	SLC26A8	0.945	1
TPRKB	ALDH1A3	0.945	1
TPRKB	Del_16p13.3	0.945	1
GRB2	CREBBP	0.945	1
PIK3R1	MAP4K3	0.945	1
SMAD4	Del_4q35.1	0.945	1
FKBP9	HIST1H1T	0.945	1
HIST1H1T	Del_16p13.3	0.945	1
CREBBP	12q-Amp	0.945	1
CREBBP	Del_2q22.1	0.945	1
CTNNB1	12q-Amp	0.945	1
6p-Amp	Del_19p13.3	0.945	1
Amp_8p11.23	Del_12p13.1	0.945	1
Amp_11p15.5	Del_18q21.2	0.945	1
Amp_13q12.2	Del_5q23.3	0.945	1
Amp_15q26.1	Del_6q26	0.945	1
Amp_15q26.1	Del_19p13.3	0.945	1
Amp_20p11.21	Del_21q21.1	0.945	1
Del_1p36.11	Del_2p12	0.945	1
Del_5q12.1	Del_8q11.1	0.945	1
APC	7p-Amp	0.946	1
TXNDC2	MPHOSPH10	0.946	1
ACVR1B	FMN2	0.946	1
GGT1	Del_3p14.2	0.946	1
NF2	BCORL1	0.946	1
NF1	Del_5q22.2	0.946	1
ATXN3L	Amp_1q31.1	0.946	1
ERBB2	NEXN	0.946	1
ERBB2	Amp_19q12	0.946	1
PRRG1	12q-Amp	0.946	1
RLIM	TOP2B	0.946	1
L1TD1	Amp_17q24.1	0.946	1
CDK12	Del_4p16.1	0.946	1
PRPS1	IDH1	0.946	1
PRPS1	Amp_8q24.21	0.946	1
17q-Amp	Del_7q31.1	0.946	1
6p-Amp	Amp_13q22.1	0.946	1
8p-Amp	Amp_17q24.1	0.946	1
1p-Del	Del_6p25.3	0.946	1
1p-Del	Del_15q15.2	0.946	1
Amp_1q31.1	Amp_19q12	0.946	1
Amp_8q24.21	Del_7q31.1	0.946	1
Amp_12p13.33	Amp_13q12.2	0.946	1
Del_1p33	Del_16q23.1	0.946	1
Del_6q26	Del_17q24.3	0.946	1
ZFP36L2	GRB2	0.947	1
ZFP36L2	Del_2q22.1	0.947	1
TXNDC2	MGA	0.947	1
FAM9A	RPTN	0.947	1
RPTN	THOC7	0.947	1
RPTN	RSPH3	0.947	1
THOC7	RBBP7	0.947	1
THOC7	GMPS	0.947	1
THOC7	16p-Amp	0.947	1
THOC7	Del_8q11.1	0.947	1
ERBB2	ST3GAL6	0.947	1
ERBB2	PLEKHF2	0.947	1
ST3GAL6	ATM	0.947	1
GRB2	HLA-A	0.947	1
RSPH3	RBBP7	0.947	1
RSPH3	GMPS	0.947	1
RBPJ	Del_2q22.1	0.947	1
C14orf184	Amp_16p11.2	0.947	1
16p-Amp	Del_2q22.1	0.947	1
2q-Amp	Amp_13q12.2	0.947	1
6p-Amp	Amp_13q12.2	0.947	1
7q-Amp	5q-Del	0.947	1
7q-Amp	Del_3q26.31	0.947	1
8q-Amp	9p-Amp	0.947	1
18p-Del	Amp_2q33.1	0.947	1
Amp_13q22.1	Del_17q24.3	0.947	1
Amp_20p12.1	Del_3p14.2	0.947	1
Del_5q12.1	Del_6q26	0.947	1
ARID1A	PTGDR	0.948	1
ARID1A	IDH1	0.948	1
CRIPAK	RNF43	0.948	1
PRKDC	16q-Amp	0.948	1
ALPK2	SMAD4	0.948	1
ROS1	Amp_15q26.1	0.948	1
PTGDR	Del_15q11.2	0.948	1
GMNN	CTNNB1	0.948	1
Amp_6p21.1	Del_10q21.1	0.948	1
Amp_12p13.33	Amp_13q12.13	0.948	1
Amp_17q12	Del_8p23.2	0.948	1
Amp_17q24.1	Del_14q11.2	0.948	1
Del_3p26.3	Del_10q21.1	0.948	1
Del_3p14.2	Del_10q21.1	0.948	1
Del_3q26.31	Del_22q13.32	0.948	1
Del_7q31.1	Del_15q11.2	0.948	1
APC	Del_15q22.33	0.949	1
CRIPAK	FAM123B	0.949	1
ZFP36L2	Del_5q22.2	0.949	1
WNT1	Amp_12p13.33	0.949	1
GGT1	MGA	0.949	1
RHOA	PRRG1	0.949	1
RHOA	Amp_10q22.3	0.949	1
RPTN	Del_5q22.2	0.949	1
FBXW7	MVK	0.949	1
FBXW7	Amp_10q22.3	0.949	1
CHUK	6p-Amp	0.949	1
MGA	8p-Amp	0.949	1
ZBTB20	RB1	0.949	1
IQCD	Amp_10q22.3	0.949	1
PTCH1	Amp_1q31.1	0.949	1
PLAGL2	12q-Amp	0.949	1
C11orf30	2p-Amp	0.949	1
C11orf30	2q-Amp	0.949	1
PRRG1	IFT57	0.949	1
IFT57	Amp_10q22.3	0.949	1
SMAD4	BCORL1	0.949	1
C14orf184	Amp_12p13.33	0.949	1
PTGDR	8p-Amp	0.949	1
ZNF486	Amp_10q22.3	0.949	1
12q-Amp	Del_2p12	0.949	1
16p-Amp	4q-Del	0.949	1
7q-Amp	Del_15q11.2	0.949	1
8p-Amp	Del_5q12.1	0.949	1
14q-Del	Del_5q22.2	0.949	1
14q-Del	Del_6q26	0.949	1
14q-Del	Del_19p13.3	0.949	1
18q-Del	Del_2q22.1	0.949	1
20p-Del	Del_10q21.1	0.949	1
4p-Del	Amp_20p12.1	0.949	1
8p-Del	Amp_12p13.33	0.949	1
Amp_11p15.5	Del_8q11.1	0.949	1
Amp_15q26.1	Del_3p26.3	0.949	1
Amp_17q12	Del_1p33	0.949	1
Del_2q22.1	Del_10q23.31	0.949	1
Del_3p14.2	Del_21q21.1	0.949	1
APC	DCLK2	0.95	1
APC	FYN	0.95	1
APC	BIRC3	0.95	1
ACVR1B	PCBP1	0.95	1
ACVR1B	FYN	0.95	1
BCOR	Amp_10q22.3	0.95	1
SMAD2	SELPLG	0.95	1
SMAD2	SLC26A8	0.95	1
WNT1	BCL9	0.95	1
WNT1	NLRC4	0.95	1
WNT1	SLC12A6	0.95	1
FMN2	Del_12p13.1	0.95	1
GGT1	1p-Del	0.95	1
STARD3NL	ST3GAL6	0.95	1
STARD3NL	PLEKHF2	0.95	1
RHOA	ROS1	0.95	1
EGR1	NR1H3	0.95	1
EGR1	PCBP1	0.95	1
EGR1	DCLK2	0.95	1
EGR1	FYN	0.95	1
EGR1	GPATCH8	0.95	1
ATXN3L	ZBTB20	0.95	1
TPRKB	RLIM	0.95	1
MVK	DIP2B	0.95	1
P2RY13	KDM6A	0.95	1
P2RY13	8q-Amp	0.95	1
ST3GAL6	PCBP1	0.95	1
ST3GAL6	FYN	0.95	1
PLEKHF2	DCLK2	0.95	1
PLEKHF2	FYN	0.95	1
PLEKHF2	BIRC3	0.95	1
NR1H3	Del_16q23.1	0.95	1
ALG12	NLRC4	0.95	1
ALG12	SLC12A6	0.95	1
DIP2B	PRRG1	0.95	1
VCX2	GPATCH8	0.95	1
DCLK2	CTNNB1	0.95	1
C14orf184	BCORL1	0.95	1
GPATCH8	CTNNB1	0.95	1
HIST1H1T	1p-Del	0.95	1
7q-Amp	Del_5q23.3	0.95	1
18p-Del	Del_6p25.3	0.95	1
18p-Del	Del_6q26	0.95	1
Amp_8p11.21	Amp_16p11.2	0.95	1
Del_12p13.1	Del_16p13.3	0.95	1
RNF43	P2RY13	0.951	1
SOX9	PIK3R1	0.951	1
MLH1	C11orf30	0.951	1
FMN2	C14orf184	0.951	1
FBXW7	Del_3p14.2	0.951	1
MGA	CTNNB1	0.951	1
PLEKHF2	BMPR2	0.951	1
VCX2	7p-Amp	0.951	1
VCX2	8q-Amp	0.951	1
L1TD1	PRPS1	0.951	1
L1TD1	Del_7q31.1	0.951	1
BCORL1	Amp_8p11.23	0.951	1
SLC12A6	Del_10q23.31	0.951	1
PRPS1	5q-Del	0.951	1
PRPS1	Amp_19q12	0.951	1
PTGDR	Amp_19q12	0.951	1
CTNNB1	2q-Amp	0.951	1
16p-Amp	17p-Del	0.951	1
7p-Amp	Del_4q22.1	0.951	1
15q-Del	Amp_20p12.1	0.951	1
4p-Del	Amp_1q31.1	0.951	1
5q-Del	Del_10q25.2	0.951	1
Amp_2q33.1	Del_10q25.2	0.951	1
Amp_13q12.13	Del_16p13.3	0.951	1
Amp_17q12	Del_8p22	0.951	1
Amp_20q11.21	Del_16p13.3	0.951	1
Amp_20q13.12	Del_19p13.3	0.951	1
RNF43	PRPS1	0.952	1
RNF43	PTGDR	0.952	1
SOX9	RBPJ	0.952	1
ZFP36L2	Del_5q23.3	0.952	1
TXNDC2	Del_21q11.2	0.952	1
BCOR	PLAGL2	0.952	1
GGT1	12p-Amp	0.952	1
GGT1	4q-Del	0.952	1
OR4D10	FAM9A	0.952	1
OR4D10	THOC7	0.952	1
OR4D10	RSPH3	0.952	1
CHUK	RLIM	0.952	1
GRB2	DDX26B	0.952	1
PLAGL2	DIP2B	0.952	1
RLIM	Amp_6p21.1	0.952	1
20p-Amp	Amp_1q31.1	0.952	1
20q-Amp	Del_17q24.3	0.952	1
7p-Amp	14q-Del	0.952	1
7p-Amp	Del_3p14.2	0.952	1
1p-Del	Amp_6p21.1	0.952	1
8p-Del	Del_2q22.1	0.952	1
Amp_5p12	Del_18q12.2	0.952	1
Amp_13q12.13	Del_10q21.1	0.952	1
Amp_20p12.1	Del_2p12	0.952	1
CRIPAK	ALPK2	0.953	1
FAM123B	NF2	0.953	1
ZFP36L2	TOP2B	0.953	1
TXNDC2	HLA-A	0.953	1
TXNDC2	GMPS	0.953	1
MLH1	EGR1	0.953	1
MLH1	ST3GAL6	0.953	1
BCOR	C11orf30	0.953	1
SMAD2	2q-Amp	0.953	1
SMAD2	6p-Amp	0.953	1
GGT1	14q-Del	0.953	1
RHOA	22q-Del	0.953	1
RPTN	Del_6p25.3	0.953	1
MGA	12q-Amp	0.953	1
PRRG1	PIK3R1	0.953	1
RBPJ	TOP2B	0.953	1
RBBP7	Del_19p13.3	0.953	1
TOP2B	GMPS	0.953	1
HLA-A	Del_19p13.3	0.953	1
GMNN	Amp_17q24.1	0.953	1
6p-Amp	Del_5q21.2	0.953	1
21q-Del	Del_16p13.3	0.953	1
Amp_6p21.1	Del_17q24.3	0.953	1
Amp_8p11.23	Del_18q22.1	0.953	1
Del_3p26.3	Del_17q24.3	0.953	1
Del_5q12.1	Del_10q23.31	0.953	1
APC	FMN2	0.954	1
CRIPAK	ATM	0.954	1
WNT1	Amp_5p12	0.954	1
GGT1	Del_17p12	0.954	1
STARD3NL	CREBBP	0.954	1
NF2	ATXN3L	0.954	1
TPRKB	Amp_8p11.21	0.954	1
ALG12	Amp_5p12	0.954	1
PIK3R1	Del_3q26.31	0.954	1
DCLK2	CREBBP	0.954	1
14q-Del	Del_2p12	0.954	1
Amp_6p21.1	Del_8p22	0.954	1
Amp_10q22.3	Del_18q12.2	0.954	1
Amp_11p15.5	Del_18q22.1	0.954	1
Del_3p26.3	Del_8p22	0.954	1
Del_3q26.31	Del_4q35.1	0.954	1
CRIPAK	PLAGL2	0.955	1
TP53	VCX2	0.955	1
TP53	4q-Del	0.955	1
TP53	Del_1p13.2	0.955	1
FAM123B	RPTN	0.955	1
FAM123B	HLA-A	0.955	1
ZFP36L2	TPRKB	0.955	1
B2M	HIST1H1T	0.955	1
CDH1	OR4D10	0.955	1
GGT1	RBPJ	0.955	1
GGT1	16p-Amp	0.955	1
GGT1	Del_5q23.3	0.955	1
OR4D10	MGA	0.955	1
RPTN	HIST1H1T	0.955	1
FBXW7	GRB2	0.955	1
CHUK	MGA	0.955	1
TPRKB	RBPJ	0.955	1
TPRKB	GMPS	0.955	1
ERBB2	C2orf29	0.955	1
ERBB2	FKBP9	0.955	1
ERBB2	ALDH1A3	0.955	1
NR1H3	ASXL1	0.955	1
ALPK2	Del_7q31.1	0.955	1
ASXL1	FYN	0.955	1
ASXL1	PTGDR	0.955	1
ASXL1	BIRC3	0.955	1
ALG12	Amp_8p11.21	0.955	1
PTCH1	Amp_8p11.23	0.955	1
DIP2B	Del_3p14.2	0.955	1
C2orf29	PRPS1	0.955	1
RBPJ	HIST1H1T	0.955	1
SLC26A8	Del_7q31.1	0.955	1
RBBP7	HIST1H1T	0.955	1
FKBP9	PRPS1	0.955	1
ALDH1A3	Del_7q31.1	0.955	1
PRPS1	7p-Amp	0.955	1
PTGDR	Del_16p13.3	0.955	1
HIST1H1T	Del_8q11.1	0.955	1
16q-Amp	Del_8p23.2	0.955	1
7p-Amp	Del_4p16.1	0.955	1
9p-Amp	Del_12p13.1	0.955	1
Amp_6p21.1	Amp_20q12	0.955	1
Amp_8q24.21	Del_5q22.2	0.955	1
Del_3p26.3	Del_5q12.1	0.955	1
Del_7q31.1	Del_16p13.3	0.955	1
RNF43	ACVR1B	0.956	1
ZFP36L2	PTCH1	0.956	1
B2M	PTCH1	0.956	1
SELPLG	ZBTB20	0.956	1
SELPLG	17q-Amp	0.956	1
MAPK6	MAP4K3	0.956	1
EGR1	PRRG1	0.956	1
ATXN3L	Del_3q26.31	0.956	1
MVK	PLEKHF2	0.956	1
ZBTB20	SLC26A8	0.956	1
ERBB2	ALPK2	0.956	1
ERBB2	Amp_17q12	0.956	1
IQCD	21q-Del	0.956	1
PLEKHF2	PRRG1	0.956	1
PRRG1	VCX2	0.956	1
IFT57	ZNF486	0.956	1
IFT57	9p-Amp	0.956	1
VCX2	Amp_10q22.3	0.956	1
SMAD4	GPATCH8	0.956	1
RB1	GMPS	0.956	1
ALDH1A3	IDH1	0.956	1
BCORL1	CTNNB1	0.956	1
22q-Del	Del_3p14.2	0.956	1
5q-Del	Amp_20q12	0.956	1
Amp_1q31.1	Amp_17q12	0.956	1
Amp_2q33.1	Amp_19q12	0.956	1
Amp_6p21.1	Amp_8p11.21	0.956	1
Amp_16p11.2	Del_18q21.2	0.956	1
Amp_20p11.21	Del_5q12.1	0.956	1
Amp_20q12	Del_2p12	0.956	1
Del_2p12	Del_21q11.2	0.956	1
Del_5q12.1	Del_21q21.1	0.956	1
Del_7q31.1	Del_14q11.2	0.956	1
Del_7q31.1	Del_15q21.1	0.956	1
APC	Del_5q23.3	0.957	1
FAM123B	PTCH1	0.957	1
TXNDC2	ALG12	0.957	1
TXNDC2	C14orf184	0.957	1
TXNDC2	KDM6A	0.957	1
CDH1	EGR1	0.957	1
CDH1	PLEKHF2	0.957	1
CDH1	VCX2	0.957	1
MLH1	ALG12	0.957	1
MLH1	C14orf184	0.957	1
MLH1	KDM6A	0.957	1
SMAD2	CTNNB1	0.957	1
FAM9A	Amp_12p13.33	0.957	1
PRKDC	TPRKB	0.957	1
THOC7	15q-Del	0.957	1
FBXW7	12q-Amp	0.957	1
ZBTB20	Amp_15q26.1	0.957	1
RLIM	Del_12p13.1	0.957	1
SMAD4	HIST1H1T	0.957	1
TOP2B	KDM6A	0.957	1
C14orf184	Del_6p25.3	0.957	1
C14orf184	Del_6q26	0.957	1
SETD2	PTGDR	0.957	1
SETD2	Del_7q31.1	0.957	1
CTNNB1	Del_12p13.1	0.957	1
17q-Amp	6p-Amp	0.957	1
17q-Amp	Amp_15q26.1	0.957	1
14q-Del	Del_16q23.1	0.957	1
Amp_12p13.33	Del_2q22.1	0.957	1
Amp_13q22.1	Del_5q21.2	0.957	1
Amp_20p11.21	Del_15q21.1	0.957	1
Del_3p14.2	Del_17p12	0.957	1
Del_3q26.31	Del_17p12	0.957	1
Del_6q26	Del_16q23.1	0.957	1
CRIPAK	CHUK	0.958	1
CRIPAK	PTEN	0.958	1
B2M	C11orf30	0.958	1
ACVR1B	PLAGL2	0.958	1
STARD3NL	GRB2	0.958	1
FAM9A	NR1H3	0.958	1
FAM9A	DCLK2	0.958	1
FAM9A	FYN	0.958	1
THOC7	ERBB2	0.958	1
MVK	KDM6A	0.958	1
ERBB2	RSPH3	0.958	1
ERBB2	Amp_16p11.2	0.958	1
P2RY13	RSPH3	0.958	1
P2RY13	Del_2q22.1	0.958	1
NR1H3	RSPH3	0.958	1
NR1H3	SETD2	0.958	1
GRB2	PCBP1	0.958	1
GRB2	DCLK2	0.958	1
GRB2	FYN	0.958	1
GRB2	BIRC3	0.958	1
GRB2	16q-Amp	0.958	1
PRRG1	Del_16q23.1	0.958	1
RSPH3	GPATCH8	0.958	1
RSPH3	BIRC3	0.958	1
RSPH3	Amp_1q31.1	0.958	1
RSPH3	Amp_17q24.1	0.958	1
HLA-A	Del_3p26.3	0.958	1
GPATCH8	Del_2q22.1	0.958	1
SETD2	BIRC3	0.958	1
13q-Amp	Amp_6p21.1	0.958	1
13q-Amp	Del_3p26.3	0.958	1
16p-Amp	Del_3p26.3	0.958	1
16q-Amp	Del_2q22.1	0.958	1
9p-Amp	21q-Del	0.958	1
Amp_1q31.1	Amp_16p11.2	0.958	1
Amp_11p15.5	Del_10q23.31	0.958	1
Amp_13q22.1	Del_21q21.1	0.958	1
Del_6p25.3	Del_22q13.32	0.958	1
Del_7q31.1	Del_15q15.2	0.958	1
APC	15q-Del	0.959	1
ACVR1B	CDH1	0.959	1
BCOR	IFT57	0.959	1
SMAD2	LARP4B	0.959	1
FMN2	THOC7	0.959	1
FMN2	IDH1	0.959	1
GGT1	Del_22q13.32	0.959	1
BCL9	PCBP1	0.959	1
P2RY13	SLC12A6	0.959	1
IQCD	DIP2B	0.959	1
NR1H3	NLRC4	0.959	1
NR1H3	BCORL1	0.959	1
NLRC4	DCLK2	0.959	1
PRRG1	8p-Amp	0.959	1
RLIM	PRPS1	0.959	1
MPHOSPH10	PTGDR	0.959	1
MPHOSPH10	Del_7q31.1	0.959	1
VCX2	PTEN	0.959	1
C2orf29	BMPR2	0.959	1
DCLK2	SLC12A6	0.959	1
PTEN	HIST1H1T	0.959	1
PTEN	Amp_8p11.23	0.959	1
FYN	BCORL1	0.959	1
BCORL1	BIRC3	0.959	1
BCORL1	16q-Amp	0.959	1
PTGDR	1p-Del	0.959	1
17q-Amp	Del_14q11.2	0.959	1
14q-Del	Amp_6p21.1	0.959	1
8p-Del	Amp_10q22.3	0.959	1
Amp_6p21.1	Amp_11p15.5	0.959	1
Amp_20q12	Del_5q22.2	0.959	1
Amp_20q13.12	Del_10q21.1	0.959	1
Del_2p12	Del_22q13.32	0.959	1
Del_5q12.1	Del_17q24.3	0.959	1
Del_14q11.2	Del_17q24.3	0.959	1
APC	PRKDC	0.96	1
TP53	Amp_17q12	0.96	1
FAM123B	SMAD2	0.96	1
TXNDC2	OR4D10	0.96	1
OR4D10	PTEN	0.96	1
CHUK	ALG12	0.96	1
CHUK	C14orf184	0.96	1
TPRKB	DDX26B	0.96	1
ZBTB20	ASXL1	0.96	1
ALPK2	IDH1	0.96	1
ALPK2	KDM6A	0.96	1
ASXL1	Del_16q23.1	0.96	1
DDX26B	HIST1H1T	0.96	1
SMAD4	KDM6A	0.96	1
C14orf184	Amp_6p21.1	0.96	1
16p-Amp	Del_10q23.31	0.96	1
20q-Amp	Del_16p13.3	0.96	1
9p-Amp	Del_21q21.1	0.96	1
18p-Del	Del_2p12	0.96	1
Amp_2q33.1	Del_4q22.1	0.96	1
Amp_20p11.21	Del_2p12	0.96	1
Amp_20q12	Del_8q11.1	0.96	1
Del_1p36.11	Del_7q31.1	0.96	1
TP53	21q-Del	0.961	1
SELPLG	ATXN3L	0.961	1
SELPLG	NEXN	0.961	1
MAPK6	ATXN3L	0.961	1
ATXN3L	ALDH1A3	0.961	1
TPRKB	CREBBP	0.961	1
ST3GAL6	CDK12	0.961	1
NR1H3	Del_3p14.2	0.961	1
GRB2	Del_5q22.2	0.961	1
RSPH3	BMPR2	0.961	1
VCX2	Del_15q11.2	0.961	1
SLC26A8	Amp_2q33.1	0.961	1
ALDH1A3	NEXN	0.961	1
NEXN	6p-Amp	0.961	1
NEXN	Amp_15q26.1	0.961	1
HIST1H1T	Del_15q22.33	0.961	1
2p-Amp	Del_3q26.31	0.961	1
6p-Amp	Amp_2q33.1	0.961	1
6p-Amp	Del_3q26.31	0.961	1
7p-Amp	20p-Del	0.961	1
7p-Amp	Del_5q12.1	0.961	1
8p-Amp	Del_5q23.3	0.961	1
8q-Amp	20p-Del	0.961	1
8q-Amp	Del_5q12.1	0.961	1
4p-Del	Amp_20p11.21	0.961	1
5q-Del	Del_16p13.3	0.961	1
Amp_5p12	Amp_8p11.23	0.961	1
Amp_8q24.21	Del_5q12.1	0.961	1
Amp_16p11.2	Del_2p12	0.961	1
Amp_20p12.1	Del_4q22.1	0.961	1
Del_2q22.1	Del_5q22.2	0.961	1
Del_3p14.2	Del_14q11.2	0.961	1
Del_3q26.31	Del_16p13.3	0.961	1
Del_16q23.1	Del_21q11.2	0.961	1
ARID1A	TXNDC2	0.962	1
ARID1A	GMNN	0.962	1
ACVR1B	CHUK	0.962	1
WNT1	PTCH1	0.962	1
RHOA	EGR1	0.962	1
EGR1	ZNF486	0.962	1
MGA	PRPS1	0.962	1
MGA	Del_7q31.1	0.962	1
ZBTB20	RLIM	0.962	1
ST3GAL6	IQCD	0.962	1
ST3GAL6	IFT57	0.962	1
ALG12	RB1	0.962	1
ALG12	ATM	0.962	1
C11orf30	KDM6A	0.962	1
C11orf30	Del_16q23.1	0.962	1
MPHOSPH10	IDH1	0.962	1
ALDH1A3	CREBBP	0.962	1
CDK12	GMNN	0.962	1
GMNN	Del_15q11.2	0.962	1
16p-Amp	Amp_8q24.21	0.962	1
Amp_10q22.3	Amp_16p11.2	0.962	1
Amp_13q22.1	Del_3p26.3	0.962	1
Amp_16p11.2	Del_18q22.1	0.962	1
Amp_20q11.21	Del_2p12	0.962	1
B2M	SMAD2	0.963	1
SMAD2	HLA-A	0.963	1
SMAD2	GMPS	0.963	1
THOC7	MVK	0.963	1
THOC7	Amp_10q22.3	0.963	1
BCL9	PLAGL2	0.963	1
PLEKHF2	ROS1	0.963	1
GRB2	Amp_10q22.3	0.963	1
NLRC4	PLAGL2	0.963	1
PIK3R1	ALDH1A3	0.963	1
RSPH3	Amp_10q22.3	0.963	1
ATM	Del_3p14.2	0.963	1
5q-Del	Del_21q21.1	0.963	1
Amp_1q31.1	Del_10q25.2	0.963	1
Amp_10q22.3	Del_2q22.1	0.963	1
Amp_13q12.2	Del_3p26.3	0.963	1
Amp_13q12.2	Del_16p13.3	0.963	1
Del_5q21.2	Del_6q26	0.963	1
Del_5q23.3	Del_10q23.31	0.963	1
Del_8q11.1	Del_12p13.1	0.963	1
APC	BCL9	0.964	1
APC	NLRC4	0.964	1
APC	SLC12A6	0.964	1
TP53	17q-Amp	0.964	1
ZFP36L2	PRPS1	0.964	1
B2M	PTGDR	0.964	1
ACVR1B	PRKDC	0.964	1
SMAD2	C14orf184	0.964	1
WNT1	Del_12p13.1	0.964	1
SELPLG	2p-Amp	0.964	1
SELPLG	2q-Amp	0.964	1
SELPLG	Amp_15q26.1	0.964	1
MAPK6	6p-Amp	0.964	1
RHOA	PIK3R1	0.964	1
EGR1	12q-Amp	0.964	1
RPTN	PRPS1	0.964	1
THOC7	Amp_20q13.12	0.964	1
MGA	P2RY13	0.964	1
BCL9	ERBB2	0.964	1
ERBB2	SLC12A6	0.964	1
ST3GAL6	12q-Amp	0.964	1
ASXL1	PIK3R1	0.964	1
PIK3R1	ZNF486	0.964	1
C2orf29	6p-Amp	0.964	1
SLC26A8	2p-Amp	0.964	1
SLC26A8	2q-Amp	0.964	1
RBBP7	PTGDR	0.964	1
HLA-A	PTGDR	0.964	1
ALDH1A3	6p-Amp	0.964	1
GMPS	PRPS1	0.964	1
GMPS	Del_7q31.1	0.964	1
20p-Amp	Del_4q35.1	0.964	1
7p-Amp	Amp_1q31.1	0.964	1
8p-Amp	Amp_15q26.1	0.964	1
18p-Del	Amp_8p11.21	0.964	1
18q-Del	Amp_8p11.23	0.964	1
4p-Del	Del_3q26.31	0.964	1
Amp_1q31.1	Del_4p16.1	0.964	1
Amp_8p11.23	Del_18q21.2	0.964	1
Amp_11p15.5	Del_18p11.31	0.964	1
Amp_15q26.1	Amp_20p12.1	0.964	1
Del_1p33	Del_5q12.1	0.964	1
Del_2p12	Del_17p12	0.964	1
Del_4q35.1	Del_6p25.3	0.964	1
Del_5q22.2	Del_22q13.32	0.964	1
Del_8p22	Del_21q11.2	0.964	1
APC	20p-Amp	0.965	1
ARID1A	KDM6A	0.965	1
ARID1A	Del_16q23.1	0.965	1
RNF43	SOX9	0.965	1
TP53	ERBB2	0.965	1
FAM123B	RSPH3	0.965	1
ZFP36L2	SMAD4	0.965	1
B2M	SMAD4	0.965	1
MLH1	FAM9A	0.965	1
GGT1	DCLK2	0.965	1
TPRKB	P2RY13	0.965	1
TPRKB	DCLK2	0.965	1
TPRKB	GPATCH8	0.965	1
TPRKB	16q-Amp	0.965	1
P2RY13	HIST1H1T	0.965	1
ALPK2	12p-Amp	0.965	1
SMAD4	RBBP7	0.965	1
FYN	HIST1H1T	0.965	1
LARP4B	MAP4K3	0.965	1
LARP4B	IDH1	0.965	1
BCORL1	8p-Amp	0.965	1
BIRC3	HIST1H1T	0.965	1
GMNN	9p-Amp	0.965	1
GMNN	17p-Del	0.965	1
16p-Amp	8q-Amp	0.965	1
8q-Amp	Del_2p12	0.965	1
8q-Amp	Del_3q26.31	0.965	1
Amp_6p21.1	Amp_20q11.21	0.965	1
Amp_8p11.21	Del_18p11.31	0.965	1
Amp_10q22.3	Del_15q22.33	0.965	1
Amp_20q12	Del_17q24.3	0.965	1
Amp_20q13.12	Del_5q21.2	0.965	1
Del_3p14.2	Del_22q13.32	0.965	1
TP53	Amp_8p11.21	0.966	1
SOX9	ATM	0.966	1
B2M	ROS1	0.966	1
TXNDC2	BCORL1	0.966	1
ACVR1B	RHOA	0.966	1
CDH1	ALDH1A3	0.966	1
SELPLG	SLC26A8	0.966	1
SELPLG	FKBP9	0.966	1
RPTN	ROS1	0.966	1
NF1	Del_12p13.1	0.966	1
MVK	BCL9	0.966	1
BCL9	Amp_10q22.3	0.966	1
ST3GAL6	Amp_8p11.23	0.966	1
NR1H3	Amp_11p15.5	0.966	1
NLRC4	PRRG1	0.966	1
NLRC4	TOP2B	0.966	1
NLRC4	Amp_10q22.3	0.966	1
PLAGL2	Amp_5p12	0.966	1
IFT57	KDM6A	0.966	1
IFT57	Del_16q23.1	0.966	1
C2orf29	FKBP9	0.966	1
C2orf29	ALDH1A3	0.966	1
DCLK2	Amp_12p13.33	0.966	1
SLC12A6	Del_6p25.3	0.966	1
13q-Amp	Amp_17q24.1	0.966	1
16p-Amp	8p-Del	0.966	1
20q-Amp	21q-Del	0.966	1
20q-Amp	Del_2p12	0.966	1
7q-Amp	Del_2q22.1	0.966	1
8q-Amp	15q-Del	0.966	1
14q-Del	Amp_11p15.5	0.966	1
18q-Del	Amp_10q22.3	0.966	1
1p-Del	Del_8p22	0.966	1
4p-Del	Amp_15q26.1	0.966	1
Amp_1q31.1	Amp_20p12.1	0.966	1
Amp_2q33.1	Amp_20q11.21	0.966	1
Amp_16p11.2	Amp_20p12.1	0.966	1
Amp_17q24.1	Amp_20p12.1	0.966	1
Amp_20p12.1	Del_17q24.3	0.966	1
Del_1p13.2	Del_12p13.1	0.966	1
APC	RBBP7	0.967	1
APC	GMPS	0.967	1
SOX9	LARP4B	0.967	1
SOX9	Del_7q31.1	0.967	1
ZFP36L2	MAP4K3	0.967	1
TXNDC2	16q-Amp	0.967	1
CDH1	BIRC3	0.967	1
BCOR	ST3GAL6	0.967	1
BCOR	GMNN	0.967	1
WNT1	ZBTB20	0.967	1
WNT1	MAP4K3	0.967	1
STARD3NL	Del_6p25.3	0.967	1
RHOA	FBXW7	0.967	1
EGR1	PLEKHF2	0.967	1
RPTN	ZBTB20	0.967	1
FBXW7	IQCD	0.967	1
FBXW7	ROS1	0.967	1
FBXW7	SMAD4	0.967	1
ATXN3L	Del_10q21.1	0.967	1
ZBTB20	HLA-A	0.967	1
ZBTB20	GMPS	0.967	1
P2RY13	Del_6p25.3	0.967	1
ST3GAL6	DIP2B	0.967	1
PLEKHF2	VCX2	0.967	1
ALG12	IDH1	0.967	1
DIP2B	GMNN	0.967	1
PCBP1	Del_19p13.3	0.967	1
MPHOSPH10	L1TD1	0.967	1
RBPJ	IDH1	0.967	1
TOP2B	DCLK2	0.967	1
C14orf184	IDH1	0.967	1
HLA-A	IDH1	0.967	1
GMPS	IDH1	0.967	1
CTNNB1	Amp_8p11.23	0.967	1
13q-Amp	2q-Amp	0.967	1
13q-Amp	6p-Amp	0.967	1
17q-Amp	20p-Amp	0.967	1
17q-Amp	Del_8p23.2	0.967	1
9p-Amp	Del_3q26.31	0.967	1
1p-Del	5q-Del	0.967	1
Amp_1q31.1	Del_5q21.2	0.967	1
Amp_2q33.1	Del_10q21.1	0.967	1
Amp_10q22.3	Del_4q35.1	0.967	1
Amp_16p11.2	Del_3p26.3	0.967	1
Del_3p14.2	Del_16q23.1	0.967	1
Del_5q12.1	Del_14q11.2	0.967	1
Del_5q21.2	Del_21q21.1	0.967	1
APC	ATM	0.968	1
APC	Del_4q22.1	0.968	1
CRIPAK	4q-Del	0.968	1
RNF43	8p-Amp	0.968	1
FAM123B	MAP4K3	0.968	1
TXNDC2	PLAGL2	0.968	1
FMN2	P2RY13	0.968	1
FMN2	L1TD1	0.968	1
FMN2	GPATCH8	0.968	1
OR4D10	PRPS1	0.968	1
RHOA	FAM9A	0.968	1
FAM9A	IFT57	0.968	1
FAM9A	ZNF486	0.968	1
RPTN	Del_4p16.1	0.968	1
THOC7	IQCD	0.968	1
IQCD	GRB2	0.968	1
IFT57	RSPH3	0.968	1
RSPH3	ZNF486	0.968	1
RLIM	6p-Amp	0.968	1
DDX26B	PRPS1	0.968	1
6p-Amp	Amp_17q12	0.968	1
14q-Del	Del_7q31.1	0.968	1
18p-Del	Amp_11p15.5	0.968	1
1p-Del	Amp_15q26.1	0.968	1
20p-Del	Amp_13q12.2	0.968	1
Amp_12p13.33	Amp_13q22.1	0.968	1
Amp_12p13.33	Del_2p12	0.968	1
Amp_13q12.13	Del_17q24.3	0.968	1
Del_2p12	Del_6q26	0.968	1
Del_2p12	Del_18p11.31	0.968	1
Del_2p12	Del_19p13.3	0.968	1
Del_3q26.31	Del_8p22	0.968	1
Del_5q21.2	Del_21q11.2	0.968	1
Del_5q22.2	Del_15q22.33	0.968	1
Del_18p11.31	Del_19p13.3	0.968	1
APC	SMAD4	0.969	1
CRIPAK	IDH1	0.969	1
TP53	Del_4p16.1	0.969	1
SOX9	P2RY13	0.969	1
SOX9	FYN	0.969	1
BCOR	PTCH1	0.969	1
SMAD2	DDX26B	0.969	1
FBXW7	TOP2B	0.969	1
TPRKB	MVK	0.969	1
TPRKB	PRRG1	0.969	1
ERBB2	RBPJ	0.969	1
ERBB2	RBBP7	0.969	1
ERBB2	16p-Amp	0.969	1
RLIM	ATM	0.969	1
CDK12	KDM6A	0.969	1
CREBBP	Del_16q23.1	0.969	1
16p-Amp	Amp_1q31.1	0.969	1
17q-Amp	Amp_20p12.1	0.969	1
7p-Amp	Del_2q22.1	0.969	1
7q-Amp	Del_17q24.3	0.969	1
21q-Del	Amp_6p21.1	0.969	1
21q-Del	Del_3p26.3	0.969	1
Amp_8p11.23	Del_19p13.3	0.969	1
Amp_20p12.1	Del_4q35.1	0.969	1
Amp_20q12	Del_4q22.1	0.969	1
Del_4q22.1	Del_6p25.3	0.969	1
Del_5q23.3	Del_12p13.1	0.969	1
ARID1A	DCLK2	0.97	1
ARID1A	ALDH1A3	0.97	1
CRIPAK	EGR1	0.97	1
CRIPAK	ST3GAL6	0.97	1
CRIPAK	Del_5q21.2	0.97	1
ACVR1B	ROS1	0.97	1
EGR1	NF1	0.97	1
THOC7	CDK12	0.97	1
FBXW7	ZBTB20	0.97	1
FBXW7	MAP4K3	0.97	1
FBXW7	SETD2	0.97	1
FBXW7	IDH1	0.97	1
CHUK	PCBP1	0.97	1
CHUK	DCLK2	0.97	1
CHUK	FYN	0.97	1
ATXN3L	SETD2	0.97	1
MGA	KDM6A	0.97	1
TPRKB	BMPR2	0.97	1
P2RY13	Del_5q22.2	0.97	1
ALG12	L1TD1	0.97	1
ALG12	Del_3q26.31	0.97	1
C11orf30	BIRC3	0.97	1
RSPH3	CDK12	0.97	1
RSPH3	ATM	0.97	1
ROS1	KDM6A	0.97	1
C14orf184	Del_3q26.31	0.97	1
16q-Amp	Amp_6p21.1	0.97	1
7q-Amp	Del_15q21.1	0.97	1
17p-Del	Del_7q31.1	0.97	1
18p-Del	Amp_16p11.2	0.97	1
Amp_5p12	Del_19p13.3	0.97	1
Amp_8p11.21	Del_5q12.1	0.97	1
Amp_13q12.13	Del_3q26.31	0.97	1
Amp_20q11.21	Del_5q23.3	0.97	1
Del_3p26.3	Del_8p23.2	0.97	1
Del_5q12.1	Del_16q23.1	0.97	1
Del_12p13.1	Del_21q11.2	0.97	1
RNF43	RHOA	0.971	1
RNF43	C2orf29	0.971	1
FAM123B	NLRC4	0.971	1
SOX9	RB1	0.971	1
ZFP36L2	ATXN3L	0.971	1
ZFP36L2	Del_3q26.31	0.971	1
ACVR1B	GMNN	0.971	1
CDH1	FAM9A	0.971	1
MLH1	BCL9	0.971	1
BCOR	L1TD1	0.971	1
FMN2	HIST1H1T	0.971	1
STARD3NL	PRPS1	0.971	1
STARD3NL	PTGDR	0.971	1
STARD3NL	Del_7q31.1	0.971	1
MAPK6	MPHOSPH10	0.971	1
RPTN	ATXN3L	0.971	1
NF1	NR1H3	0.971	1
NF1	DCLK2	0.971	1
NF1	PTGDR	0.971	1
CHUK	NLRC4	0.971	1
ATXN3L	DIP2B	0.971	1
ATXN3L	HLA-A	0.971	1
P2RY13	Del_7q31.1	0.971	1
PLAGL2	Del_5q22.2	0.971	1
C11orf30	BCORL1	0.971	1
C11orf30	SLC12A6	0.971	1
PCBP1	PTGDR	0.971	1
RLIM	ALDH1A3	0.971	1
RLIM	CREBBP	0.971	1
MPHOSPH10	FKBP9	0.971	1
MPHOSPH10	CREBBP	0.971	1
RBPJ	CTNNB1	0.971	1
RBPJ	2p-Amp	0.971	1
RBPJ	2q-Amp	0.971	1
RBPJ	Amp_19q12	0.971	1
RBBP7	Del_3q26.31	0.971	1
DCLK2	PRPS1	0.971	1
DCLK2	PTGDR	0.971	1
DCLK2	Del_7q31.1	0.971	1
FYN	PTGDR	0.971	1
FYN	Del_7q31.1	0.971	1
GMPS	CTNNB1	0.971	1
PTGDR	BIRC3	0.971	1
PTGDR	16q-Amp	0.971	1
GMNN	KDM6A	0.971	1
CTNNB1	Del_8q11.1	0.971	1
13q-Amp	Del_3q26.31	0.971	1
16p-Amp	Amp_19q12	0.971	1
16p-Amp	Del_3q26.31	0.971	1
14q-Del	Del_8q11.1	0.971	1
14q-Del	Del_10q21.1	0.971	1
1p-Del	Del_15q22.33	0.971	1
22q-Del	Amp_20q12	0.971	1
5q-Del	Del_17q24.3	0.971	1
Amp_6p21.1	Del_4q35.1	0.971	1
Amp_15q26.1	Del_8q11.1	0.971	1
Amp_19q12	Del_17q24.3	0.971	1
Del_1p33	Del_6p25.3	0.971	1
Del_3p26.3	Del_15q11.2	0.971	1
Del_3q26.31	Del_17q24.3	0.971	1
Del_7q31.1	Del_10q23.31	0.971	1
Del_8p23.2	Del_21q11.2	0.971	1
Del_15q21.1	Del_19p13.3	0.971	1
APC	ERBB2	0.972	1
TP53	Del_15q15.2	0.972	1
B2M	BMPR2	0.972	1
ACVR1B	MAP4K3	0.972	1
BCOR	FMN2	0.972	1
FMN2	DIP2B	0.972	1
SELPLG	SMAD4	0.972	1
OR4D10	MAP4K3	0.972	1
RHOA	BCL9	0.972	1
FAM9A	ST3GAL6	0.972	1
FAM9A	12q-Amp	0.972	1
PRKDC	IQCD	0.972	1
PRKDC	ZNF486	0.972	1
THOC7	ST3GAL6	0.972	1
BCL9	IQCD	0.972	1
BCL9	RB1	0.972	1
ZBTB20	Del_16q23.1	0.972	1
ST3GAL6	RSPH3	0.972	1
IQCD	SLC12A6	0.972	1
PLEKHF2	RSPH3	0.972	1
PLEKHF2	Del_2q22.1	0.972	1
GRB2	VCX2	0.972	1
NLRC4	IFT57	0.972	1
PRRG1	SMAD4	0.972	1
RB1	ALDH1A3	0.972	1
MAP4K3	KDM6A	0.972	1
SLC12A6	ZNF486	0.972	1
12q-Amp	Amp_20p11.21	0.972	1
12q-Amp	Del_2q22.1	0.972	1
17q-Amp	18q-Del	0.972	1
20q-Amp	Amp_6p21.1	0.972	1
2p-Amp	Del_14q11.2	0.972	1
2q-Amp	Del_14q11.2	0.972	1
9p-Amp	Amp_20p11.21	0.972	1
17p-Del	Del_3p14.2	0.972	1
18p-Del	Del_2q22.1	0.972	1
8p-Del	Amp_13q22.1	0.972	1
8p-Del	Del_10q25.2	0.972	1
Amp_5p12	Del_5q22.2	0.972	1
Amp_10q22.3	Del_6q26	0.972	1
Amp_13q12.13	Amp_17q12	0.972	1
Amp_13q22.1	Del_5q12.1	0.972	1
Amp_20q13.12	Del_16p13.3	0.972	1
Del_1p33	Del_5q23.3	0.972	1
Del_8p22	Del_10q25.2	0.972	1
Del_8q11.1	Del_10q25.2	0.972	1
APC	MPHOSPH10	0.973	1
CRIPAK	Del_17q24.3	0.973	1
SOX9	SETD2	0.973	1
ACVR1B	NF1	0.973	1
ACVR1B	ST3GAL6	0.973	1
ACVR1B	12q-Amp	0.973	1
ACVR1B	Amp_11p15.5	0.973	1
WNT1	MAPK6	0.973	1
WNT1	PIK3R1	0.973	1
WNT1	FKBP9	0.973	1
SELPLG	ALPK2	0.973	1
SELPLG	C14orf184	0.973	1
MAPK6	ASXL1	0.973	1
MAPK6	ALG12	0.973	1
EGR1	Del_16q23.1	0.973	1
THOC7	Amp_20q12	0.973	1
FBXW7	MPHOSPH10	0.973	1
MGA	Amp_15q26.1	0.973	1
TPRKB	IQCD	0.973	1
TPRKB	ZNF486	0.973	1
TPRKB	CTNNB1	0.973	1
IQCD	ASXL1	0.973	1
IQCD	HIST1H1T	0.973	1
PLEKHF2	PIK3R1	0.973	1
PLEKHF2	KDM6A	0.973	1
ASXL1	IFT57	0.973	1
ALG12	SLC26A8	0.973	1
ALG12	FKBP9	0.973	1
ALG12	ALDH1A3	0.973	1
PLAGL2	Del_12p13.1	0.973	1
RSPH3	ROS1	0.973	1
C2orf29	C14orf184	0.973	1
C14orf184	ALDH1A3	0.973	1
ALDH1A3	12q-Amp	0.973	1
HIST1H1T	ZNF486	0.973	1
20p-Amp	2p-Amp	0.973	1
20p-Amp	2q-Amp	0.973	1
7p-Amp	Del_15q11.2	0.973	1
5q-Del	Del_1p36.11	0.973	1
Amp_8p11.23	Amp_13q22.1	0.973	1
Amp_8p11.23	Del_18q12.2	0.973	1
Amp_11p15.5	Del_14q11.2	0.973	1
Amp_20q13.12	Del_1p13.2	0.973	1
Del_3p14.2	Del_8p22	0.973	1
Del_15q15.2	Del_19p13.3	0.973	1
APC	KDM6A	0.974	1
APC	17p-Del	0.974	1
ARID1A	RSPH3	0.974	1
CRIPAK	ATXN3L	0.974	1
CRIPAK	Del_3q26.31	0.974	1
FAM123B	STARD3NL	0.974	1
FAM123B	FYN	0.974	1
FAM123B	NEXN	0.974	1
TXNDC2	SMAD4	0.974	1
MLH1	FMN2	0.974	1
MLH1	DCLK2	0.974	1
MLH1	GPATCH8	0.974	1
MLH1	NEXN	0.974	1
BCOR	PIK3R1	0.974	1
BCOR	RSPH3	0.974	1
SMAD2	PCBP1	0.974	1
SMAD2	DCLK2	0.974	1
STARD3NL	Del_10q23.31	0.974	1
THOC7	DIP2B	0.974	1
THOC7	LARP4B	0.974	1
IQCD	ATM	0.974	1
NLRC4	SETD2	0.974	1
DIP2B	Del_2q22.1	0.974	1
PRRG1	12p-Amp	0.974	1
PRRG1	Amp_12p13.33	0.974	1
IFT57	ATM	0.974	1
RSPH3	LARP4B	0.974	1
BCORL1	SETD2	0.974	1
ATM	ZNF486	0.974	1
13q-Amp	Del_1p13.2	0.974	1
20p-Amp	Del_8p22	0.974	1
20q-Amp	22q-Del	0.974	1
7q-Amp	Del_15q15.2	0.974	1
9p-Amp	Del_21q11.2	0.974	1
15q-Del	Del_19p13.3	0.974	1
17p-Del	1p-Del	0.974	1
Amp_8p11.23	Amp_17q12	0.974	1
Amp_17q24.1	Del_6p25.3	0.974	1
Amp_17q24.1	Del_6q26	0.974	1
Amp_20q11.21	Del_22q13.32	0.974	1
Del_6p25.3	Del_19p13.3	0.974	1
Del_7q31.1	Del_15q22.33	0.974	1
Del_15q21.1	Del_16q23.1	0.974	1
APC	RB1	0.975	1
TP53	14q-Del	0.975	1
TP53	Del_17q24.3	0.975	1
ZFP36L2	SELPLG	0.975	1
B2M	ALDH1A3	0.975	1
BCOR	MAPK6	0.975	1
WNT1	RLIM	0.975	1
GGT1	20p-Del	0.975	1
SELPLG	DIP2B	0.975	1
SELPLG	RBPJ	0.975	1
SELPLG	HLA-A	0.975	1
NF2	PTGDR	0.975	1
PRKDC	RPTN	0.975	1
RPTN	SLC26A8	0.975	1
RPTN	FKBP9	0.975	1
NF1	MAP4K3	0.975	1
NF1	IDH1	0.975	1
FBXW7	CTNNB1	0.975	1
CHUK	PRRG1	0.975	1
MVK	PRPS1	0.975	1
BCL9	GMNN	0.975	1
IQCD	Amp_5p12	0.975	1
ALG12	MPHOSPH10	0.975	1
NLRC4	GMNN	0.975	1
DIP2B	ALDH1A3	0.975	1
PRRG1	PRPS1	0.975	1
PRRG1	PTGDR	0.975	1
MPHOSPH10	CDK12	0.975	1
VCX2	Amp_8q24.21	0.975	1
C2orf29	RBBP7	0.975	1
C2orf29	GMPS	0.975	1
RBPJ	FKBP9	0.975	1
RBBP7	ALDH1A3	0.975	1
SLC12A6	GMNN	0.975	1
PTGDR	Del_1p33	0.975	1
HIST1H1T	20p-Del	0.975	1
12p-Amp	Amp_15q26.1	0.975	1
13q-Amp	Amp_8p11.23	0.975	1
16q-Amp	Amp_8p11.23	0.975	1
16q-Amp	Amp_20p12.1	0.975	1
7p-Amp	Del_14q11.2	0.975	1
8q-Amp	Del_18p11.31	0.975	1
20p-Del	Del_10q25.2	0.975	1
Amp_1q31.1	Amp_20q13.12	0.975	1
Amp_6p21.1	Amp_10q22.3	0.975	1
Amp_8p11.21	Del_5q22.2	0.975	1
Amp_10q22.3	Del_7q31.1	0.975	1
Amp_11p15.5	Amp_15q26.1	0.975	1
Amp_20p11.21	Del_14q11.2	0.975	1
Amp_20q11.21	Del_17q24.3	0.975	1
Del_3q26.31	Del_5q12.1	0.975	1
Del_14q11.2	Del_21q11.2	0.975	1
SOX9	MVK	0.976	1
ACVR1B	LARP4B	0.976	1
FMN2	PRRG1	0.976	1
OR4D10	ATXN3L	0.976	1
NF2	RHOA	0.976	1
PRKDC	ERBB2	0.976	1
FBXW7	P2RY13	0.976	1
FBXW7	GPATCH8	0.976	1
MGA	PTEN	0.976	1
ZBTB20	PLAGL2	0.976	1
DIP2B	Del_16q23.1	0.976	1
DDX26B	NEXN	0.976	1
C14orf184	8p-Amp	0.976	1
NEXN	CTNNB1	0.976	1
12p-Amp	Del_10q25.2	0.976	1
20p-Amp	Del_2p12	0.976	1
20q-Amp	Del_4q22.1	0.976	1
7p-Amp	Del_5q23.3	0.976	1
7q-Amp	20p-Del	0.976	1
8q-Amp	Amp_5p12	0.976	1
18q-Del	Amp_17q24.1	0.976	1
21q-Del	Del_2q22.1	0.976	1
Del_2q22.1	Del_17p12	0.976	1
Del_3p14.2	Del_18q22.1	0.976	1
CRIPAK	FAM9A	0.977	1
CRIPAK	RB1	0.977	1
RNF43	FBXW7	0.977	1
RNF43	RLIM	0.977	1
B2M	PIK3R1	0.977	1
GGT1	VCX2	0.977	1
FAM9A	GRB2	0.977	1
FAM9A	RSPH3	0.977	1
EGR1	RB1	0.977	1
EGR1	HIST1H1T	0.977	1
THOC7	GRB2	0.977	1
FBXW7	NLRC4	0.977	1
TPRKB	ST3GAL6	0.977	1
TPRKB	CDK12	0.977	1
BCL9	CDK12	0.977	1
ZBTB20	DCLK2	0.977	1
ZBTB20	FYN	0.977	1
ZBTB20	BIRC3	0.977	1
ST3GAL6	RB1	0.977	1
ST3GAL6	HIST1H1T	0.977	1
PLEKHF2	HIST1H1T	0.977	1
GRB2	RSPH3	0.977	1
RSPH3	Del_2q22.1	0.977	1
ROS1	MAP4K3	0.977	1
MPHOSPH10	12q-Amp	0.977	1
SMAD4	PRPS1	0.977	1
GPATCH8	MAP4K3	0.977	1
16q-Amp	17q-Amp	0.977	1
16q-Amp	Amp_15q26.1	0.977	1
20p-Amp	Del_8p23.2	0.977	1
7p-Amp	Del_5q22.2	0.977	1
20p-Del	Del_8q11.1	0.977	1
21q-Del	Del_4p16.1	0.977	1
4q-Del	Amp_20q11.21	0.977	1
5q-Del	Del_1p13.2	0.977	1
Amp_2q33.1	Amp_13q22.1	0.977	1
Amp_6p21.1	Amp_20p12.1	0.977	1
Amp_6p21.1	Amp_20q13.12	0.977	1
Amp_11p15.5	Amp_19q12	0.977	1
Amp_20p12.1	Del_5q21.2	0.977	1
Amp_20q11.21	Del_1p13.2	0.977	1
Amp_20q12	Del_22q13.32	0.977	1
Del_6p25.3	Del_10q25.2	0.977	1
Del_10q25.2	Del_19p13.3	0.977	1
APC	ALDH1A3	0.978	1
ARID1A	FMN2	0.978	1
TP53	PRPS1	0.978	1
TP53	PTGDR	0.978	1
ZFP36L2	WNT1	0.978	1
ZFP36L2	PTEN	0.978	1
ZFP36L2	C14orf184	0.978	1
B2M	PTEN	0.978	1
TXNDC2	GMNN	0.978	1
WNT1	ALPK2	0.978	1
WNT1	RBPJ	0.978	1
WNT1	RBBP7	0.978	1
MAPK6	PTEN	0.978	1
RHOA	PTEN	0.978	1
RHOA	PRPS1	0.978	1
RHOA	Del_6p25.3	0.978	1
RHOA	Del_7q31.1	0.978	1
EGR1	BCORL1	0.978	1
RPTN	ALG12	0.978	1
THOC7	Amp_20q11.21	0.978	1
FBXW7	PIK3R1	0.978	1
ATXN3L	PLAGL2	0.978	1
ST3GAL6	BCORL1	0.978	1
IQCD	TOP2B	0.978	1
IQCD	PTGDR	0.978	1
PLEKHF2	NLRC4	0.978	1
NR1H3	PTEN	0.978	1
ALPK2	ALG12	0.978	1
ALG12	RBBP7	0.978	1
ALG12	HLA-A	0.978	1
ALG12	Del_8q11.1	0.978	1
DDX26B	SMAD4	0.978	1
RBBP7	PTEN	0.978	1
TOP2B	GMNN	0.978	1
PTEN	GPATCH8	0.978	1
C14orf184	16p-Amp	0.978	1
PTGDR	ZNF486	0.978	1
ZNF486	Del_7q31.1	0.978	1
CREBBP	GMNN	0.978	1
12q-Amp	8q-Amp	0.978	1
13q-Amp	Del_1p36.11	0.978	1
20p-Amp	Amp_8p11.23	0.978	1
1p-Del	Amp_20q11.21	0.978	1
1p-Del	Del_15q11.2	0.978	1
4p-Del	Del_6q26	0.978	1
4q-Del	Amp_16p11.2	0.978	1
Amp_6p21.1	Del_14q11.2	0.978	1
Amp_6p21.1	Del_19p13.3	0.978	1
Amp_11p15.5	Del_17p12	0.978	1
Amp_11p15.5	Del_18q12.2	0.978	1
Amp_13q12.13	Del_1p36.11	0.978	1
Amp_13q12.2	Del_3q26.31	0.978	1
Amp_13q22.1	Amp_17q24.1	0.978	1
Amp_19q12	Del_2p12	0.978	1
Amp_20p11.21	Del_4p16.1	0.978	1
Del_5q22.2	Del_10q25.2	0.978	1
Del_5q22.2	Del_19p13.3	0.978	1
Del_7q31.1	Del_10q25.2	0.978	1
Del_16q23.1	Del_21q21.1	0.978	1
FAM123B	LARP4B	0.979	1
SOX9	NF1	0.979	1
SOX9	MGA	0.979	1
ZFP36L2	MPHOSPH10	0.979	1
ZFP36L2	CDK12	0.979	1
B2M	MPHOSPH10	0.979	1
CDH1	C14orf184	0.979	1
GGT1	12q-Amp	0.979	1
OR4D10	SLC26A8	0.979	1
RPTN	CDK12	0.979	1
BCL9	IDH1	0.979	1
ALPK2	RLIM	0.979	1
GRB2	Del_16q23.1	0.979	1
RLIM	RBPJ	0.979	1
RLIM	HLA-A	0.979	1
MPHOSPH10	RBBP7	0.979	1
MPHOSPH10	GMPS	0.979	1
DDX26B	SLC26A8	0.979	1
DDX26B	FKBP9	0.979	1
PTEN	MAP4K3	0.979	1
7p-Amp	8p-Del	0.979	1
20p-Del	Amp_13q12.13	0.979	1
Amp_8q24.21	Amp_16p11.2	0.979	1
Amp_8q24.21	Del_5q23.3	0.979	1
Amp_10q22.3	Del_15q11.2	0.979	1
Amp_13q12.13	Del_1p33	0.979	1
Amp_13q12.13	Del_21q21.1	0.979	1
Del_3q26.31	Del_8p23.2	0.979	1
Del_5q22.2	Del_21q11.2	0.979	1
Del_5q23.3	Del_10q25.2	0.979	1
Del_7q31.1	Del_21q21.1	0.979	1
TP53	15q-Del	0.98	1
FAM123B	C2orf29	0.98	1
FAM123B	FKBP9	0.98	1
MLH1	MAPK6	0.98	1
BCOR	MPHOSPH10	0.98	1
WNT1	SETD2	0.98	1
STARD3NL	Del_3q26.31	0.98	1
FAM9A	PIK3R1	0.98	1
CHUK	IQCD	0.98	1
CHUK	PTEN	0.98	1
CHUK	GMNN	0.98	1
ATXN3L	PCBP1	0.98	1
ATXN3L	DCLK2	0.98	1
ATXN3L	GPATCH8	0.98	1
ATXN3L	BIRC3	0.98	1
MGA	ALDH1A3	0.98	1
ERBB2	NR1H3	0.98	1
ERBB2	PCBP1	0.98	1
ERBB2	DCLK2	0.98	1
ERBB2	FYN	0.98	1
ERBB2	GPATCH8	0.98	1
PLEKHF2	ALPK2	0.98	1
PLEKHF2	Amp_5p12	0.98	1
NR1H3	L1TD1	0.98	1
ALPK2	12q-Amp	0.98	1
ASXL1	VCX2	0.98	1
ALG12	DDX26B	0.98	1
PLAGL2	ALDH1A3	0.98	1
DIP2B	MPHOSPH10	0.98	1
PRRG1	6p-Amp	0.98	1
PCBP1	NEXN	0.98	1
PCBP1	Amp_2q33.1	0.98	1
PIK3R1	RSPH3	0.98	1
RLIM	LARP4B	0.98	1
ROS1	FYN	0.98	1
MPHOSPH10	LARP4B	0.98	1
SMAD4	SLC12A6	0.98	1
L1TD1	GPATCH8	0.98	1
DCLK2	NEXN	0.98	1
SLC12A6	Del_10q21.1	0.98	1
NEXN	BIRC3	0.98	1
BIRC3	Amp_2q33.1	0.98	1
BIRC3	Del_3q26.31	0.98	1
13q-Amp	Del_17q24.3	0.98	1
16q-Amp	Amp_17q24.1	0.98	1
16q-Amp	Amp_19q12	0.98	1
16q-Amp	Del_3q26.31	0.98	1
16q-Amp	Del_8p22	0.98	1
2p-Amp	Amp_10q22.3	0.98	1
6p-Amp	Amp_10q22.3	0.98	1
15q-Del	Del_7q31.1	0.98	1
20p-Del	Del_5q12.1	0.98	1
20p-Del	Del_5q21.2	0.98	1
5q-Del	Amp_20q13.12	0.98	1
Amp_2q33.1	Amp_20q13.12	0.98	1
Amp_5p12	Amp_13q12.13	0.98	1
Amp_5p12	Del_21q11.2	0.98	1
Amp_8q24.21	Del_5q21.2	0.98	1
Amp_13q12.2	Del_1p36.11	0.98	1
Amp_16p11.2	Amp_19q12	0.98	1
Amp_17q24.1	Del_18q21.2	0.98	1
Amp_20q13.12	Del_5q12.1	0.98	1
Del_2p12	Del_16p13.3	0.98	1
Del_3p26.3	Del_10q25.2	0.98	1
Del_8p22	Del_21q21.1	0.98	1
ARID1A	WNT1	0.981	1
ARID1A	ALG12	0.981	1
TP53	CHUK	0.981	1
TP53	PTEN	0.981	1
FAM123B	PRRG1	0.981	1
FAM123B	Del_6p25.3	0.981	1
ZFP36L2	ATM	0.981	1
B2M	NF1	0.981	1
TXNDC2	ASXL1	0.981	1
ACVR1B	SLC26A8	0.981	1
CDH1	MAP4K3	0.981	1
MLH1	PRRG1	0.981	1
BCOR	PRKDC	0.981	1
BCOR	HIST1H1T	0.981	1
SMAD2	TOP2B	0.981	1
FMN2	CHUK	0.981	1
FMN2	MPHOSPH10	0.981	1
GGT1	THOC7	0.981	1
GGT1	GRB2	0.981	1
FAM9A	TPRKB	0.981	1
FAM9A	SMAD4	0.981	1
EGR1	SETD2	0.981	1
EGR1	PRPS1	0.981	1
THOC7	TPRKB	0.981	1
THOC7	20q-Amp	0.981	1
NF1	MVK	0.981	1
NF1	RBPJ	0.981	1
CHUK	C11orf30	0.981	1
TPRKB	GRB2	0.981	1
TPRKB	RSPH3	0.981	1
TPRKB	ROS1	0.981	1
MVK	IDH1	0.981	1
ZBTB20	CREBBP	0.981	1
ST3GAL6	PRPS1	0.981	1
ST3GAL6	PTGDR	0.981	1
PLEKHF2	PRPS1	0.981	1
GRB2	HIST1H1T	0.981	1
C11orf30	CTNNB1	0.981	1
PRRG1	MAP4K3	0.981	1
RLIM	SETD2	0.981	1
VCX2	PTGDR	0.981	1
RBPJ	ATM	0.981	1
SMAD4	Del_2q22.1	0.981	1
RBBP7	Del_10q21.1	0.981	1
FKBP9	KDM6A	0.981	1
LARP4B	HIST1H1T	0.981	1
12q-Amp	16p-Amp	0.981	1
12q-Amp	20p-Amp	0.981	1
13q-Amp	8p-Del	0.981	1
16q-Amp	17p-Del	0.981	1
20p-Amp	9p-Amp	0.981	1
14q-Del	Amp_2q33.1	0.981	1
20p-Del	Del_7q31.1	0.981	1
Amp_8q24.21	Del_3q26.31	0.981	1
Amp_13q12.13	Del_3p26.3	0.981	1
Amp_20p11.21	Del_15q15.2	0.981	1
Amp_20p11.21	Del_19p13.3	0.981	1
Del_5q22.2	Del_21q21.1	0.981	1
Del_6p25.3	Del_12p13.1	0.981	1
Del_8q11.1	Del_10q21.1	0.981	1
Del_12p13.1	Del_19p13.3	0.981	1
Del_16p13.3	Del_16q23.1	0.981	1
APC	ATXN3L	0.982	1
RNF43	FAM123B	0.982	1
RNF43	RBPJ	0.982	1
TP53	C2orf29	0.982	1
TP53	Del_4q35.1	0.982	1
TP53	Del_5q21.2	0.982	1
SOX9	IQCD	0.982	1
SOX9	ZNF486	0.982	1
ZFP36L2	GMPS	0.982	1
B2M	HLA-A	0.982	1
TXNDC2	EGR1	0.982	1
CDH1	GGT1	0.982	1
CDH1	TPRKB	0.982	1
CDH1	HLA-A	0.982	1
CDH1	GMPS	0.982	1
MLH1	BMPR2	0.982	1
BCOR	NF1	0.982	1
SMAD2	ERBB2	0.982	1
SMAD2	ZNF486	0.982	1
STARD3NL	C2orf29	0.982	1
STARD3NL	FKBP9	0.982	1
SELPLG	NR1H3	0.982	1
SELPLG	FYN	0.982	1
SELPLG	GPATCH8	0.982	1
OR4D10	MPHOSPH10	0.982	1
NF2	BCL9	0.982	1
MAPK6	P2RY13	0.982	1
MAPK6	PCBP1	0.982	1
MAPK6	BIRC3	0.982	1
RPTN	RBPJ	0.982	1
FBXW7	ALPK2	0.982	1
FBXW7	RBBP7	0.982	1
FBXW7	HLA-A	0.982	1
ERBB2	LARP4B	0.982	1
P2RY13	SLC26A8	0.982	1
P2RY13	BMPR2	0.982	1
ST3GAL6	TOP2B	0.982	1
ST3GAL6	Del_6p25.3	0.982	1
NR1H3	FKBP9	0.982	1
NR1H3	ALDH1A3	0.982	1
PLAGL2	RLIM	0.982	1
PIK3R1	KDM6A	0.982	1
RLIM	DDX26B	0.982	1
MPHOSPH10	DDX26B	0.982	1
C2orf29	FYN	0.982	1
C2orf29	BIRC3	0.982	1
C2orf29	12p-Amp	0.982	1
RBPJ	HLA-A	0.982	1
RBPJ	GMPS	0.982	1
SLC26A8	DCLK2	0.982	1
SLC26A8	GPATCH8	0.982	1
L1TD1	SLC12A6	0.982	1
DCLK2	FKBP9	0.982	1
DCLK2	BMPR2	0.982	1
FKBP9	GPATCH8	0.982	1
FKBP9	BIRC3	0.982	1
HLA-A	GMPS	0.982	1
FYN	ALDH1A3	0.982	1
ALDH1A3	GPATCH8	0.982	1
BCORL1	Del_3q26.31	0.982	1
SLC12A6	NEXN	0.982	1
PTGDR	Del_5q22.2	0.982	1
GMNN	Del_12p13.1	0.982	1
16p-Amp	4p-Del	0.982	1
16q-Amp	Del_4p16.1	0.982	1
17q-Amp	Amp_13q12.13	0.982	1
20q-Amp	1p-Del	0.982	1
7q-Amp	Amp_1q31.1	0.982	1
1p-Del	Del_5q22.2	0.982	1
20p-Del	Del_6q26	0.982	1
21q-Del	Del_10q23.31	0.982	1
22q-Del	Amp_20q11.21	0.982	1
5q-Del	Del_21q11.2	0.982	1
8p-Del	Del_1p33	0.982	1
Amp_16p11.2	Del_18p11.31	0.982	1
Amp_20q12	Del_5q21.2	0.982	1
Del_1p13.2	Del_16p13.3	0.982	1
Del_2q22.1	Del_8p22	0.982	1
Del_5q21.2	Del_10q23.31	0.982	1
ARID1A	HIST1H1T	0.983	1
SOX9	MAPK6	0.983	1
SOX9	BCORL1	0.983	1
ACVR1B	FBXW7	0.983	1
CDH1	PIK3R1	0.983	1
BCOR	BCL9	0.983	1
WNT1	FBXW7	0.983	1
WNT1	P2RY13	0.983	1
WNT1	NR1H3	0.983	1
WNT1	12p-Amp	0.983	1
FMN2	IQCD	0.983	1
FMN2	IFT57	0.983	1
FMN2	ZNF486	0.983	1
OR4D10	CDK12	0.983	1
FAM9A	NLRC4	0.983	1
FAM9A	BCORL1	0.983	1
THOC7	8p-Amp	0.983	1
FBXW7	ALG12	0.983	1
FBXW7	C14orf184	0.983	1
ATXN3L	PRRG1	0.983	1
ATXN3L	22q-Del	0.983	1
BCL9	RSPH3	0.983	1
ZBTB20	PTCH1	0.983	1
ZBTB20	GMNN	0.983	1
P2RY13	ALG12	0.983	1
ST3GAL6	CREBBP	0.983	1
IQCD	Amp_15q26.1	0.983	1
NR1H3	ALG12	0.983	1
ALG12	Amp_8p11.23	0.983	1
GRB2	NLRC4	0.983	1
GRB2	SLC12A6	0.983	1
GRB2	8p-Amp	0.983	1
PRRG1	L1TD1	0.983	1
PIK3R1	SMAD4	0.983	1
IFT57	2p-Amp	0.983	1
IFT57	6p-Amp	0.983	1
C2orf29	CTNNB1	0.983	1
SLC26A8	CTNNB1	0.983	1
RB1	MAP4K3	0.983	1
FKBP9	CTNNB1	0.983	1
C14orf184	16q-Amp	0.983	1
C14orf184	Amp_8p11.23	0.983	1
LARP4B	BCORL1	0.983	1
LARP4B	CTNNB1	0.983	1
BCORL1	Del_2q22.1	0.983	1
MAP4K3	GMNN	0.983	1
16p-Amp	Amp_8p11.21	0.983	1
20p-Amp	Del_14q11.2	0.983	1
2p-Amp	Amp_1q31.1	0.983	1
6p-Amp	Amp_1q31.1	0.983	1
8q-Amp	18p-Del	0.983	1
8q-Amp	Amp_12p13.33	0.983	1
8q-Amp	Amp_16p11.2	0.983	1
9p-Amp	Amp_5p12	0.983	1
22q-Del	Del_3q26.31	0.983	1
Amp_1q31.1	Amp_15q26.1	0.983	1
Amp_5p12	Del_22q13.32	0.983	1
Amp_10q22.3	Del_3q26.31	0.983	1
Amp_13q12.2	Amp_17q12	0.983	1
Amp_15q26.1	Amp_17q24.1	0.983	1
Amp_16p11.2	Del_16p13.3	0.983	1
Del_3p14.2	Del_21q11.2	0.983	1
Del_3q26.31	Del_4p16.1	0.983	1
Del_5q23.3	Del_16p13.3	0.983	1
Del_10q23.31	Del_21q11.2	0.983	1
ARID1A	ZFP36L2	0.984	1
ARID1A	RBPJ	0.984	1
ARID1A	RBBP7	0.984	1
RNF43	GRB2	0.984	1
ZFP36L2	PLAGL2	0.984	1
B2M	ALPK2	0.984	1
B2M	LARP4B	0.984	1
TXNDC2	ZBTB20	0.984	1
TXNDC2	MAP4K3	0.984	1
ACVR1B	MPHOSPH10	0.984	1
MLH1	PRPS1	0.984	1
BCOR	CREBBP	0.984	1
GGT1	TPRKB	0.984	1
NF2	EGR1	0.984	1
NF2	PLEKHF2	0.984	1
FAM9A	Del_7q31.1	0.984	1
EGR1	CHUK	0.984	1
EGR1	C11orf30	0.984	1
RPTN	PLAGL2	0.984	1
THOC7	PTGDR	0.984	1
NF1	2p-Amp	0.984	1
CHUK	ST3GAL6	0.984	1
BCL9	CTNNB1	0.984	1
ZBTB20	TOP2B	0.984	1
ERBB2	ATM	0.984	1
ASXL1	RBPJ	0.984	1
ASXL1	HLA-A	0.984	1
PLAGL2	RBPJ	0.984	1
C11orf30	VCX2	0.984	1
TOP2B	IDH1	0.984	1
12q-Amp	Del_7q31.1	0.984	1
17q-Amp	Del_19p13.3	0.984	1
20q-Amp	4q-Del	0.984	1
9p-Amp	Del_18p11.31	0.984	1
15q-Del	Del_5q22.2	0.984	1
4p-Del	Del_2q22.1	0.984	1
8p-Del	Del_2p12	0.984	1
Amp_2q33.1	Amp_8p11.21	0.984	1
Amp_5p12	Del_8p22	0.984	1
Amp_6p21.1	Del_12p13.1	0.984	1
Amp_8p11.21	Amp_19q12	0.984	1
Amp_12p13.33	Amp_16p11.2	0.984	1
Amp_12p13.33	Del_12p13.1	0.984	1
Amp_15q26.1	Del_4q35.1	0.984	1
Amp_20p12.1	Del_8p23.2	0.984	1
Del_3p14.2	Del_4p16.1	0.984	1
Del_3p14.2	Del_6q26	0.984	1
Del_7q31.1	Del_10q21.1	0.984	1
Del_8q11.1	Del_17q24.3	0.984	1
Del_10q25.2	Del_12p13.1	0.984	1
CRIPAK	SLC12A6	0.985	1
CRIPAK	Amp_1q31.1	0.985	1
TP53	7q-Amp	0.985	1
FAM123B	CHUK	0.985	1
FAM123B	MPHOSPH10	0.985	1
ZFP36L2	DDX26B	0.985	1
CDH1	IQCD	0.985	1
CDH1	IFT57	0.985	1
STARD3NL	MPHOSPH10	0.985	1
SELPLG	BCORL1	0.985	1
SELPLG	SLC12A6	0.985	1
OR4D10	RPTN	0.985	1
RHOA	ZBTB20	0.985	1
FAM9A	ASXL1	0.985	1
RPTN	DDX26B	0.985	1
RPTN	SETD2	0.985	1
ATXN3L	Del_22q13.32	0.985	1
MVK	ALG12	0.985	1
MVK	C14orf184	0.985	1
BCL9	SLC26A8	0.985	1
P2RY13	MPHOSPH10	0.985	1
ST3GAL6	CTNNB1	0.985	1
ALPK2	RSPH3	0.985	1
ASXL1	RSPH3	0.985	1
ALG12	PRRG1	0.985	1
NLRC4	ALDH1A3	0.985	1
PLAGL2	8p-Amp	0.985	1
PCBP1	MPHOSPH10	0.985	1
IFT57	MAP4K3	0.985	1
RLIM	FYN	0.985	1
MPHOSPH10	DCLK2	0.985	1
MPHOSPH10	FYN	0.985	1
DDX26B	RBPJ	0.985	1
DDX26B	RBBP7	0.985	1
L1TD1	GMNN	0.985	1
C14orf184	Amp_10q22.3	0.985	1
ALDH1A3	BCORL1	0.985	1
NEXN	GMNN	0.985	1
12p-Amp	Amp_20p12.1	0.985	1
16q-Amp	8q-Amp	0.985	1
7q-Amp	Del_5q22.2	0.985	1
14q-Del	20p-Del	0.985	1
20p-Del	Amp_8p11.21	0.985	1
21q-Del	5q-Del	0.985	1
21q-Del	Del_4q22.1	0.985	1
21q-Del	Del_14q11.2	0.985	1
Amp_5p12	Del_17q24.3	0.985	1
Amp_11p15.5	Amp_20p11.21	0.985	1
Amp_13q12.13	Del_8q11.1	0.985	1
Amp_17q12	Del_2q22.1	0.985	1
Amp_17q12	Del_18q21.2	0.985	1
Amp_20p12.1	Del_15q11.2	0.985	1
Del_6p25.3	Del_17p12	0.985	1
Del_19p13.3	Del_21q11.2	0.985	1
ARID1A	RHOA	0.986	1
ARID1A	IQCD	0.986	1
TP53	4p-Del	0.986	1
TP53	Del_15q22.33	0.986	1
TP53	Del_19p13.3	0.986	1
FAM123B	ZNF486	0.986	1
B2M	FMN2	0.986	1
MLH1	RHOA	0.986	1
BCOR	PRPS1	0.986	1
SMAD2	EGR1	0.986	1
WNT1	PTEN	0.986	1
FMN2	GMPS	0.986	1
MAPK6	MVK	0.986	1
FAM9A	PTCH1	0.986	1
CHUK	SETD2	0.986	1
ATXN3L	SMAD4	0.986	1
MGA	ASXL1	0.986	1
TPRKB	Amp_8p11.23	0.986	1
MVK	FKBP9	0.986	1
ZBTB20	C11orf30	0.986	1
PLEKHF2	ATM	0.986	1
ALG12	PTEN	0.986	1
PTCH1	PRRG1	0.986	1
GRB2	TOP2B	0.986	1
DIP2B	PTGDR	0.986	1
PRRG1	SLC26A8	0.986	1
PRRG1	FKBP9	0.986	1
PRRG1	ALDH1A3	0.986	1
RSPH3	Del_6p25.3	0.986	1
VCX2	Del_12p13.1	0.986	1
C2orf29	GMNN	0.986	1
SMAD4	NEXN	0.986	1
SLC26A8	GMNN	0.986	1
FKBP9	GMNN	0.986	1
FKBP9	Amp_10q22.3	0.986	1
CREBBP	Del_3q26.31	0.986	1
20q-Amp	8p-Amp	0.986	1
8p-Amp	Amp_20q12	0.986	1
1p-Del	8p-Del	0.986	1
20p-Del	Del_21q11.2	0.986	1
4q-Del	Amp_20q12	0.986	1
5q-Del	Del_15q22.33	0.986	1
Amp_5p12	Amp_13q22.1	0.986	1
Amp_13q12.2	Del_10q21.1	0.986	1
Amp_20q12	Del_1p13.2	0.986	1
Amp_20q13.12	Del_22q13.32	0.986	1
Del_1p33	Del_8p23.2	0.986	1
Del_2q22.1	Del_6p25.3	0.986	1
Del_2q22.1	Del_19p13.3	0.986	1
Del_2q22.1	Del_21q11.2	0.986	1
Del_5q12.1	Del_21q11.2	0.986	1
Del_6p25.3	Del_10q21.1	0.986	1
Del_10q21.1	Del_19p13.3	0.986	1
APC	CTNNB1	0.987	1
CRIPAK	BMPR2	0.987	1
TP53	5q-Del	0.987	1
TP53	Amp_17q24.1	0.987	1
TP53	Del_3q26.31	0.987	1
SOX9	CDK12	0.987	1
ZFP36L2	STARD3NL	0.987	1
ZFP36L2	NR1H3	0.987	1
ZFP36L2	RB1	0.987	1
ZFP36L2	GPATCH8	0.987	1
ZFP36L2	KDM6A	0.987	1
B2M	NR1H3	0.987	1
B2M	RB1	0.987	1
B2M	FYN	0.987	1
B2M	GPATCH8	0.987	1
TXNDC2	ROS1	0.987	1
ACVR1B	RBPJ	0.987	1
ACVR1B	SLC12A6	0.987	1
ACVR1B	GMPS	0.987	1
BCOR	SMAD4	0.987	1
WNT1	RHOA	0.987	1
WNT1	IFT57	0.987	1
GGT1	PTGDR	0.987	1
GGT1	Del_7q31.1	0.987	1
GGT1	Del_14q11.2	0.987	1
GGT1	Del_15q15.2	0.987	1
GGT1	Del_15q21.1	0.987	1
STARD3NL	RPTN	0.987	1
STARD3NL	PLAGL2	0.987	1
STARD3NL	SMAD4	0.987	1
STARD3NL	RBBP7	0.987	1
STARD3NL	HLA-A	0.987	1
STARD3NL	GMPS	0.987	1
NF2	NEXN	0.987	1
RHOA	ATXN3L	0.987	1
RHOA	ALG12	0.987	1
FAM9A	SETD2	0.987	1
PRKDC	RSPH3	0.987	1
RPTN	NR1H3	0.987	1
RPTN	DCLK2	0.987	1
RPTN	GPATCH8	0.987	1
FBXW7	C2orf29	0.987	1
TPRKB	NLRC4	0.987	1
TPRKB	BCORL1	0.987	1
TPRKB	PRPS1	0.987	1
TPRKB	PTGDR	0.987	1
BCL9	HIST1H1T	0.987	1
P2RY13	PLAGL2	0.987	1
P2RY13	PIK3R1	0.987	1
P2RY13	RBPJ	0.987	1
P2RY13	SMAD4	0.987	1
P2RY13	RBBP7	0.987	1
IQCD	ALG12	0.987	1
NR1H3	PIK3R1	0.987	1
NR1H3	SMAD4	0.987	1
ALG12	ZNF486	0.987	1
PLAGL2	BIRC3	0.987	1
PCBP1	RBBP7	0.987	1
PCBP1	HLA-A	0.987	1
PIK3R1	FYN	0.987	1
IFT57	L1TD1	0.987	1
IFT57	C14orf184	0.987	1
IFT57	Del_3q26.31	0.987	1
RBPJ	FYN	0.987	1
RBPJ	BIRC3	0.987	1
RBPJ	KDM6A	0.987	1
RBPJ	Amp_8p11.23	0.987	1
RBBP7	RB1	0.987	1
RBBP7	DCLK2	0.987	1
RBBP7	BIRC3	0.987	1
RBBP7	KDM6A	0.987	1
L1TD1	TOP2B	0.987	1
L1TD1	ZNF486	0.987	1
DCLK2	HLA-A	0.987	1
DCLK2	GMPS	0.987	1
HLA-A	FYN	0.987	1
HLA-A	KDM6A	0.987	1
GPATCH8	CDK12	0.987	1
GMPS	BIRC3	0.987	1
PTGDR	HIST1H1T	0.987	1
17q-Amp	Amp_13q12.2	0.987	1
20q-Amp	Del_1p33	0.987	1
7p-Amp	Del_15q21.1	0.987	1
7q-Amp	Amp_6p21.1	0.987	1
7q-Amp	Del_8p23.2	0.987	1
18q-Del	Amp_16p11.2	0.987	1
20p-Del	Del_12p13.1	0.987	1
22q-Del	Amp_10q22.3	0.987	1
22q-Del	Amp_20q13.12	0.987	1
4p-Del	Del_16q23.1	0.987	1
Amp_2q33.1	Amp_20q12	0.987	1
Amp_8p11.23	Amp_13q12.2	0.987	1
Amp_13q12.13	Del_21q11.2	0.987	1
Amp_20q11.21	Del_5q22.2	0.987	1
Del_1p13.2	Del_8p22	0.987	1
Del_2p12	Del_18q21.2	0.987	1
Del_3p14.2	Del_17q24.3	0.987	1
Del_8p22	Del_10q21.1	0.987	1
Del_10q21.1	Del_21q21.1	0.987	1
APC	Del_12p13.1	0.988	1
ARID1A	ATXN3L	0.988	1
ZFP36L2	MGA	0.988	1
B2M	MGA	0.988	1
TXNDC2	LARP4B	0.988	1
ACVR1B	Del_7q31.1	0.988	1
BCOR	TOP2B	0.988	1
SMAD2	ZBTB20	0.988	1
SMAD2	MAP4K3	0.988	1
FMN2	PLEKHF2	0.988	1
SELPLG	IQCD	0.988	1
SELPLG	IFT57	0.988	1
SELPLG	ZNF486	0.988	1
OR4D10	NF1	0.988	1
MAPK6	RHOA	0.988	1
MAPK6	IQCD	0.988	1
MAPK6	ZNF486	0.988	1
FAM9A	C11orf30	0.988	1
EGR1	IDH1	0.988	1
THOC7	Amp_15q26.1	0.988	1
NF1	IQCD	0.988	1
NF1	ALDH1A3	0.988	1
NF1	ZNF486	0.988	1
CHUK	RSPH3	0.988	1
ATXN3L	C11orf30	0.988	1
MGA	RBPJ	0.988	1
ZBTB20	8p-Amp	0.988	1
ERBB2	IQCD	0.988	1
ERBB2	ZNF486	0.988	1
ST3GAL6	IDH1	0.988	1
IQCD	C2orf29	0.988	1
IQCD	FKBP9	0.988	1
IQCD	ALDH1A3	0.988	1
IQCD	Amp_1q31.1	0.988	1
PTCH1	L1TD1	0.988	1
GRB2	C11orf30	0.988	1
GRB2	2p-Amp	0.988	1
GRB2	6p-Amp	0.988	1
GRB2	Amp_15q26.1	0.988	1
NLRC4	RLIM	0.988	1
C11orf30	RSPH3	0.988	1
C11orf30	NEXN	0.988	1
PIK3R1	NEXN	0.988	1
RSPH3	2q-Amp	0.988	1
RSPH3	6p-Amp	0.988	1
RSPH3	Amp_15q26.1	0.988	1
ROS1	GMNN	0.988	1
VCX2	IDH1	0.988	1
DDX26B	PTEN	0.988	1
SLC26A8	ZNF486	0.988	1
C14orf184	8q-Amp	0.988	1
ALDH1A3	ZNF486	0.988	1
12p-Amp	9p-Amp	0.988	1
12q-Amp	16q-Amp	0.988	1
12q-Amp	Amp_6p21.1	0.988	1
16p-Amp	Del_14q11.2	0.988	1
16q-Amp	Amp_8q24.21	0.988	1
17q-Amp	8p-Amp	0.988	1
2p-Amp	Del_2q22.1	0.988	1
2q-Amp	Del_2q22.1	0.988	1
6p-Amp	Amp_12p13.33	0.988	1
7p-Amp	Amp_6p21.1	0.988	1
8p-Amp	Amp_20q13.12	0.988	1
9p-Amp	Amp_6p21.1	0.988	1
15q-Del	Del_1p36.11	0.988	1
15q-Del	Del_21q11.2	0.988	1
4q-Del	Del_6q26	0.988	1
Amp_1q31.1	Amp_2q33.1	0.988	1
Amp_2q33.1	Amp_6p21.1	0.988	1
Amp_6p21.1	Amp_19q12	0.988	1
Amp_8q24.21	Del_18p11.31	0.988	1
Amp_11p15.5	Amp_17q12	0.988	1
Amp_13q22.1	Del_8q11.1	0.988	1
Amp_15q26.1	Del_2q22.1	0.988	1
Amp_17q12	Del_18q22.1	0.988	1
Amp_17q24.1	Del_3q26.31	0.988	1
Amp_20p12.1	Del_17p12	0.988	1
Del_1p36.11	Del_15q22.33	0.988	1
Del_1p13.2	Del_10q21.1	0.988	1
Del_2p12	Del_18q22.1	0.988	1
Del_4p16.1	Del_7q31.1	0.988	1
Del_5q12.1	Del_15q15.2	0.988	1
Del_6q26	Del_15q11.2	0.988	1
Del_6q26	Del_15q22.33	0.988	1
Del_7q31.1	Del_16q23.1	0.988	1
Del_8p23.2	Del_16p13.3	0.988	1
Del_15q22.33	Del_19p13.3	0.988	1
Del_16p13.3	Del_18q12.2	0.988	1
CRIPAK	NF2	0.989	1
RNF43	HIST1H1T	0.989	1
TP53	Del_22q13.32	0.989	1
FAM123B	B2M	0.989	1
B2M	MLH1	0.989	1
TXNDC2	FKBP9	0.989	1
ACVR1B	ASXL1	0.989	1
CDH1	C11orf30	0.989	1
CDH1	PTGDR	0.989	1
MLH1	RPTN	0.989	1
SMAD2	GRB2	0.989	1
SMAD2	CDK12	0.989	1
WNT1	VCX2	0.989	1
FMN2	ZBTB20	0.989	1
FMN2	SLC12A6	0.989	1
OR4D10	FBXW7	0.989	1
OR4D10	PCBP1	0.989	1
OR4D10	DCLK2	0.989	1
OR4D10	FYN	0.989	1
NF2	FAM9A	0.989	1
FAM9A	MGA	0.989	1
EGR1	ALG12	0.989	1
EGR1	L1TD1	0.989	1
CHUK	PTCH1	0.989	1
MGA	PLAGL2	0.989	1
MGA	RSPH3	0.989	1
MVK	PLAGL2	0.989	1
MVK	PTEN	0.989	1
ERBB2	CTNNB1	0.989	1
ST3GAL6	ALG12	0.989	1
PLEKHF2	ALG12	0.989	1
ALG12	Amp_1q31.1	0.989	1
VCX2	7q-Amp	0.989	1
TOP2B	ALDH1A3	0.989	1
FYN	CREBBP	0.989	1
GMPS	GMNN	0.989	1
PTGDR	Del_5q21.2	0.989	1
12p-Amp	Del_2q22.1	0.989	1
12q-Amp	Amp_15q26.1	0.989	1
13q-Amp	20p-Del	0.989	1
16q-Amp	8p-Amp	0.989	1
17q-Amp	Amp_20p11.21	0.989	1
20p-Amp	8p-Amp	0.989	1
2p-Amp	9p-Amp	0.989	1
2p-Amp	Amp_13q12.13	0.989	1
2q-Amp	Amp_13q12.13	0.989	1
7p-Amp	5q-Del	0.989	1
7p-Amp	Del_15q22.33	0.989	1
7q-Amp	Del_15q22.33	0.989	1
8q-Amp	Amp_19q12	0.989	1
9p-Amp	Amp_15q26.1	0.989	1
14q-Del	Del_5q23.3	0.989	1
18q-Del	Amp_11p15.5	0.989	1
21q-Del	Del_7q31.1	0.989	1
4q-Del	Del_2q22.1	0.989	1
Amp_8p11.21	Amp_17q12	0.989	1
Amp_8p11.21	Del_17p12	0.989	1
Amp_13q12.2	Del_21q21.1	0.989	1
Amp_16p11.2	Amp_17q24.1	0.989	1
Amp_17q12	Del_18q12.2	0.989	1
Amp_20p12.1	Del_2q22.1	0.989	1
Amp_20p11.21	Del_10q21.1	0.989	1
Amp_20q11.21	Del_5q21.2	0.989	1
Amp_20q12	Del_5q12.1	0.989	1
Del_1p33	Del_5q22.2	0.989	1
Del_1p33	Del_8p22	0.989	1
Del_1p33	Del_16p13.3	0.989	1
Del_2q22.1	Del_5q12.1	0.989	1
Del_4p16.1	Del_6q26	0.989	1
Del_4q22.1	Del_10q25.2	0.989	1
Del_5q21.2	Del_17q24.3	0.989	1
Del_15q21.1	Del_21q11.2	0.989	1
Del_16p13.3	Del_19p13.3	0.989	1
Del_16p13.3	Del_22q13.32	0.989	1
Del_17q24.3	Del_21q21.1	0.989	1
APC	Del_3p26.3	0.99	1
APC	Del_18p11.31	0.99	1
ARID1A	PTCH1	0.99	1
ARID1A	PRPS1	0.99	1
ARID1A	Del_7q31.1	0.99	1
CRIPAK	MGA	0.99	1
RNF43	STARD3NL	0.99	1
RNF43	DCLK2	0.99	1
RNF43	BIRC3	0.99	1
TP53	CTNNB1	0.99	1
TP53	8q-Amp	0.99	1
TP53	Del_5q23.3	0.99	1
SOX9	RSPH3	0.99	1
SOX9	HLA-A	0.99	1
ZFP36L2	NLRC4	0.99	1
ZFP36L2	PRRG1	0.99	1
ZFP36L2	SLC12A6	0.99	1
ZFP36L2	Amp_10q22.3	0.99	1
B2M	MVK	0.99	1
B2M	BCL9	0.99	1
B2M	NLRC4	0.99	1
B2M	BCORL1	0.99	1
B2M	SLC12A6	0.99	1
ACVR1B	OR4D10	0.99	1
ACVR1B	DDX26B	0.99	1
ACVR1B	CREBBP	0.99	1
CDH1	ST3GAL6	0.99	1
CDH1	FKBP9	0.99	1
BCOR	CHUK	0.99	1
SMAD2	ATXN3L	0.99	1
SMAD2	NEXN	0.99	1
GGT1	ASXL1	0.99	1
GGT1	2p-Amp	0.99	1
GGT1	2q-Amp	0.99	1
GGT1	Amp_15q26.1	0.99	1
STARD3NL	LARP4B	0.99	1
SELPLG	CREBBP	0.99	1
NF2	DCLK2	0.99	1
NF2	FYN	0.99	1
MAPK6	CHUK	0.99	1
RHOA	MPHOSPH10	0.99	1
FAM9A	FBXW7	0.99	1
PRKDC	C14orf184	0.99	1
RPTN	NLRC4	0.99	1
RPTN	PRRG1	0.99	1
NF1	GMNN	0.99	1
CHUK	DIP2B	0.99	1
CHUK	C2orf29	0.99	1
CHUK	LARP4B	0.99	1
TPRKB	ALPK2	0.99	1
TPRKB	6p-Amp	0.99	1
TPRKB	Amp_15q26.1	0.99	1
MVK	CDK12	0.99	1
BCL9	RBBP7	0.99	1
IQCD	BMPR2	0.99	1
ALPK2	HIST1H1T	0.99	1
PLAGL2	SMAD4	0.99	1
C11orf30	ALDH1A3	0.99	1
DIP2B	PTEN	0.99	1
IFT57	ROS1	0.99	1
IFT57	MPHOSPH10	0.99	1
ROS1	ZNF486	0.99	1
MPHOSPH10	ZNF486	0.99	1
DDX26B	KDM6A	0.99	1
RBPJ	BCORL1	0.99	1
SMAD4	CREBBP	0.99	1
RBBP7	BCORL1	0.99	1
SETD2	KDM6A	0.99	1
CDK12	CTNNB1	0.99	1
PRPS1	PTGDR	0.99	1
12p-Amp	Amp_6p21.1	0.99	1
12p-Amp	Del_2p12	0.99	1
12q-Amp	9p-Amp	0.99	1
16q-Amp	4p-Del	0.99	1
20p-Amp	Amp_6p21.1	0.99	1
6p-Amp	Del_17q24.3	0.99	1
7q-Amp	15q-Del	0.99	1
8p-Amp	Amp_17q12	0.99	1
8q-Amp	Amp_13q22.1	0.99	1
1p-Del	Amp_20q13.12	0.99	1
22q-Del	Del_5q22.2	0.99	1
4p-Del	Amp_16p11.2	0.99	1
4q-Del	Del_3p26.3	0.99	1
5q-Del	Amp_13q12.13	0.99	1
5q-Del	Amp_20q11.21	0.99	1
5q-Del	Del_12p13.1	0.99	1
8p-Del	Amp_20p11.21	0.99	1
Amp_2q33.1	Amp_13q12.13	0.99	1
Amp_5p12	Amp_8p11.21	0.99	1
Amp_5p12	Amp_12p13.33	0.99	1
Amp_5p12	Del_8p23.2	0.99	1
Amp_8p11.21	Del_5q21.2	0.99	1
Amp_10q22.3	Del_8q11.1	0.99	1
Amp_11p15.5	Del_2p12	0.99	1
Amp_13q12.13	Amp_19q12	0.99	1
Amp_20p11.21	Del_4q35.1	0.99	1
Del_2q22.1	Del_5q23.3	0.99	1
Del_5q21.2	Del_19p13.3	0.99	1
Del_10q25.2	Del_21q21.1	0.99	1
APC	NF2	0.991	1
RNF43	CTNNB1	0.991	1
TP53	THOC7	0.991	1
TP53	NF1	0.991	1
TP53	Del_2q22.1	0.991	1
FAM123B	MGA	0.991	1
FAM123B	ST3GAL6	0.991	1
SOX9	C11orf30	0.991	1
MLH1	PLEKHF2	0.991	1
SMAD2	MGA	0.991	1
WNT1	NF2	0.991	1
WNT1	FAM9A	0.991	1
WNT1	CREBBP	0.991	1
FMN2	LARP4B	0.991	1
GGT1	Del_3p26.3	0.991	1
STARD3NL	P2RY13	0.991	1
STARD3NL	ASXL1	0.991	1
STARD3NL	FYN	0.991	1
STARD3NL	BIRC3	0.991	1
STARD3NL	GMNN	0.991	1
SELPLG	ERBB2	0.991	1
SELPLG	ST3GAL6	0.991	1
OR4D10	PRRG1	0.991	1
NF2	ALDH1A3	0.991	1
NF2	KDM6A	0.991	1
MAPK6	EGR1	0.991	1
MAPK6	ERBB2	0.991	1
MAPK6	PIK3R1	0.991	1
RHOA	PLAGL2	0.991	1
FAM9A	ALG12	0.991	1
FAM9A	CTNNB1	0.991	1
PRKDC	MVK	0.991	1
THOC7	ALG12	0.991	1
FBXW7	RB1	0.991	1
TPRKB	SETD2	0.991	1
MVK	CTNNB1	0.991	1
ST3GAL6	SLC26A8	0.991	1
ST3GAL6	FKBP9	0.991	1
PLEKHF2	ALDH1A3	0.991	1
NR1H3	ALPK2	0.991	1
ALPK2	DCLK2	0.991	1
ALPK2	Amp_12p13.33	0.991	1
ASXL1	GPATCH8	0.991	1
GRB2	C14orf184	0.991	1
GRB2	MAP4K3	0.991	1
NLRC4	PTGDR	0.991	1
PCBP1	BIRC3	0.991	1
PIK3R1	C2orf29	0.991	1
PIK3R1	FKBP9	0.991	1
PIK3R1	Del_16p13.3	0.991	1
RSPH3	C14orf184	0.991	1
RSPH3	MAP4K3	0.991	1
MPHOSPH10	TOP2B	0.991	1
DCLK2	GPATCH8	0.991	1
FYN	GPATCH8	0.991	1
FYN	BIRC3	0.991	1
FYN	GMNN	0.991	1
BCORL1	PRPS1	0.991	1
MAP4K3	SETD2	0.991	1
SETD2	HIST1H1T	0.991	1
SLC12A6	PTGDR	0.991	1
BIRC3	GMNN	0.991	1
GMNN	16q-Amp	0.991	1
13q-Amp	Amp_19q12	0.991	1
13q-Amp	Del_19p13.3	0.991	1
16q-Amp	Amp_17q12	0.991	1
17q-Amp	Del_2q22.1	0.991	1
20p-Amp	Amp_16p11.2	0.991	1
20p-Amp	Amp_17q24.1	0.991	1
2p-Amp	Amp_13q12.2	0.991	1
2q-Amp	Amp_13q22.1	0.991	1
7p-Amp	Del_4q35.1	0.991	1
8p-Amp	Amp_2q33.1	0.991	1
8p-Amp	Amp_20q11.21	0.991	1
9p-Amp	Del_18q12.2	0.991	1
9p-Amp	Del_18q21.2	0.991	1
15q-Del	5q-Del	0.991	1
1p-Del	Del_5q21.2	0.991	1
20p-Del	Del_1p33	0.991	1
21q-Del	Del_5q22.2	0.991	1
21q-Del	Del_10q25.2	0.991	1
4q-Del	Del_3p14.2	0.991	1
5q-Del	Amp_8p11.23	0.991	1
5q-Del	Del_14q11.2	0.991	1
8p-Del	Del_1p13.2	0.991	1
Amp_1q31.1	Amp_13q22.1	0.991	1
Amp_1q31.1	Del_16p13.3	0.991	1
Amp_2q33.1	Del_14q11.2	0.991	1
Amp_6p21.1	Amp_8q24.21	0.991	1
Amp_8p11.23	Amp_19q12	0.991	1
Amp_11p15.5	Del_22q13.32	0.991	1
Amp_12p13.33	Del_10q25.2	0.991	1
Amp_16p11.2	Amp_17q12	0.991	1
Amp_17q24.1	Amp_20q13.12	0.991	1
Amp_17q24.1	Del_8p23.2	0.991	1
Amp_20q11.21	Del_4q22.1	0.991	1
Amp_20q12	Del_10q21.1	0.991	1
Del_2p12	Del_18q12.2	0.991	1
Del_2q22.1	Del_21q21.1	0.991	1
Del_4q35.1	Del_16q23.1	0.991	1
Del_5q12.1	Del_12p13.1	0.991	1
Del_6p25.3	Del_10q23.31	0.991	1
Del_10q23.31	Del_19p13.3	0.991	1
APC	Del_18q22.1	0.992	1
ZFP36L2	RHOA	0.992	1
ZFP36L2	ROS1	0.992	1
ZFP36L2	ZNF486	0.992	1
ZFP36L2	CTNNB1	0.992	1
B2M	RHOA	0.992	1
ACVR1B	STARD3NL	0.992	1
ACVR1B	MGA	0.992	1
ACVR1B	BIRC3	0.992	1
ACVR1B	2p-Amp	0.992	1
ACVR1B	2q-Amp	0.992	1
CDH1	SLC12A6	0.992	1
MLH1	ZBTB20	0.992	1
MLH1	BCORL1	0.992	1
BCOR	MVK	0.992	1
SMAD2	MAPK6	0.992	1
SMAD2	PRKDC	0.992	1
SMAD2	ALDH1A3	0.992	1
FMN2	ASXL1	0.992	1
FMN2	RSPH3	0.992	1
FMN2	BMPR2	0.992	1
GGT1	Del_18p11.31	0.992	1
GGT1	Del_21q11.2	0.992	1
OR4D10	NLRC4	0.992	1
OR4D10	RB1	0.992	1
OR4D10	SLC12A6	0.992	1
MAPK6	PTCH1	0.992	1
EGR1	BMPR2	0.992	1
NF1	ZBTB20	0.992	1
FBXW7	RLIM	0.992	1
FBXW7	BCORL1	0.992	1
CHUK	MPHOSPH10	0.992	1
ATXN3L	ALPK2	0.992	1
ATXN3L	MAP4K3	0.992	1
TPRKB	ALG12	0.992	1
MVK	8p-Amp	0.992	1
ZBTB20	L1TD1	0.992	1
ZBTB20	NEXN	0.992	1
ERBB2	PTCH1	0.992	1
P2RY13	SETD2	0.992	1
P2RY13	Del_3p14.2	0.992	1
ST3GAL6	PLAGL2	0.992	1
ST3GAL6	MPHOSPH10	0.992	1
IQCD	PTCH1	0.992	1
IQCD	RBPJ	0.992	1
IQCD	RB1	0.992	1
IQCD	20p-Del	0.992	1
PTCH1	IFT57	0.992	1
PTCH1	GMNN	0.992	1
GRB2	L1TD1	0.992	1
NLRC4	BMPR2	0.992	1
PLAGL2	VCX2	0.992	1
C11orf30	RLIM	0.992	1
PCBP1	SETD2	0.992	1
IFT57	RBBP7	0.992	1
IFT57	RB1	0.992	1
IFT57	CDK12	0.992	1
IFT57	GMPS	0.992	1
RSPH3	L1TD1	0.992	1
RSPH3	NEXN	0.992	1
RB1	ZNF486	0.992	1
TOP2B	PTGDR	0.992	1
TOP2B	Del_7q31.1	0.992	1
DCLK2	SETD2	0.992	1
HLA-A	CTNNB1	0.992	1
FYN	SETD2	0.992	1
FYN	KDM6A	0.992	1
GPATCH8	SETD2	0.992	1
PTGDR	Amp_15q26.1	0.992	1
BIRC3	KDM6A	0.992	1
13q-Amp	Amp_8q24.21	0.992	1
17q-Amp	Del_3q26.31	0.992	1
20p-Amp	Amp_8p11.21	0.992	1
20q-Amp	Amp_2q33.1	0.992	1
20q-Amp	Del_22q13.32	0.992	1
2p-Amp	Amp_20p11.21	0.992	1
2q-Amp	Amp_20p11.21	0.992	1
6p-Amp	Amp_20p11.21	0.992	1
7p-Amp	15q-Del	0.992	1
7p-Amp	Amp_5p12	0.992	1
7p-Amp	Del_5q21.2	0.992	1
7p-Amp	Del_12p13.1	0.992	1
7q-Amp	Amp_5p12	0.992	1
8p-Del	Del_3q26.31	0.992	1
Amp_1q31.1	Amp_13q12.2	0.992	1
Amp_2q33.1	Amp_17q12	0.992	1
Amp_8p11.23	Amp_17q24.1	0.992	1
Amp_8p11.23	Del_2p12	0.992	1
Amp_10q22.3	Del_22q13.32	0.992	1
Amp_13q12.2	Del_17q24.3	0.992	1
Amp_13q12.2	Del_19p13.3	0.992	1
Amp_17q12	Del_3q26.31	0.992	1
Del_2p12	Del_10q23.31	0.992	1
Del_2q22.1	Del_3q26.31	0.992	1
Del_4p16.1	Del_16q23.1	0.992	1
Del_5q12.1	Del_10q25.2	0.992	1
Del_5q22.2	Del_17q24.3	0.992	1
Del_5q23.3	Del_14q11.2	0.992	1
Del_6q26	Del_7q31.1	0.992	1
Del_8q11.1	Del_10q23.31	0.992	1
Del_10q23.31	Del_21q21.1	0.992	1
Del_12p13.1	Del_17q24.3	0.992	1
Del_19p13.3	Del_21q21.1	0.992	1
APC	18p-Del	0.993	1
ARID1A	NR1H3	0.993	1
ARID1A	FYN	0.993	1
CRIPAK	Del_12p13.1	0.993	1
TP53	Del_21q11.2	0.993	1
TP53	Del_21q21.1	0.993	1
ZFP36L2	EGR1	0.993	1
B2M	TXNDC2	0.993	1
B2M	TOP2B	0.993	1
TXNDC2	RPTN	0.993	1
TXNDC2	NF1	0.993	1
CDH1	RLIM	0.993	1
CDH1	MPHOSPH10	0.993	1
WNT1	NF1	0.993	1
WNT1	12q-Amp	0.993	1
GGT1	Del_8p22	0.993	1
STARD3NL	MVK	0.993	1
SELPLG	THOC7	0.993	1
OR4D10	IFT57	0.993	1
OR4D10	ZNF486	0.993	1
NF2	MVK	0.993	1
NF2	RLIM	0.993	1
NF2	MPHOSPH10	0.993	1
MAPK6	FAM9A	0.993	1
MAPK6	ZBTB20	0.993	1
FAM9A	PLAGL2	0.993	1
EGR1	RPTN	0.993	1
EGR1	HLA-A	0.993	1
RPTN	ST3GAL6	0.993	1
RPTN	PLEKHF2	0.993	1
NF1	P2RY13	0.993	1
NF1	ALG12	0.993	1
NF1	VCX2	0.993	1
NF1	BIRC3	0.993	1
NF1	16q-Amp	0.993	1
FBXW7	MGA	0.993	1
CHUK	PTGDR	0.993	1
ATXN3L	L1TD1	0.993	1
MGA	MAP4K3	0.993	1
MVK	NR1H3	0.993	1
ERBB2	RLIM	0.993	1
ST3GAL6	RBPJ	0.993	1
ST3GAL6	GMPS	0.993	1
PLEKHF2	RBPJ	0.993	1
NR1H3	PRRG1	0.993	1
ASXL1	BCORL1	0.993	1
ALG12	12q-Amp	0.993	1
PTCH1	HIST1H1T	0.993	1
GRB2	PLAGL2	0.993	1
GRB2	FKBP9	0.993	1
GRB2	ALDH1A3	0.993	1
NLRC4	SMAD4	0.993	1
C11orf30	Del_7q31.1	0.993	1
DIP2B	LARP4B	0.993	1
DIP2B	MAP4K3	0.993	1
PRRG1	FYN	0.993	1
PRRG1	GMNN	0.993	1
PIK3R1	IFT57	0.993	1
IFT57	DDX26B	0.993	1
ROS1	VCX2	0.993	1
DDX26B	ZNF486	0.993	1
RB1	HIST1H1T	0.993	1
C14orf184	Amp_8p11.21	0.993	1
MAP4K3	HIST1H1T	0.993	1
SETD2	NEXN	0.993	1
HIST1H1T	Del_1p13.2	0.993	1
13q-Amp	8q-Amp	0.993	1
13q-Amp	Del_15q22.33	0.993	1
16p-Amp	14q-Del	0.993	1
16p-Amp	Del_4p16.1	0.993	1
16q-Amp	Amp_8p11.21	0.993	1
20p-Amp	Del_10q21.1	0.993	1
20q-Amp	20p-Del	0.993	1
20q-Amp	Del_21q21.1	0.993	1
7p-Amp	Del_16p13.3	0.993	1
8p-Amp	9p-Amp	0.993	1
15q-Del	Del_6q26	0.993	1
17p-Del	Del_1p33	0.993	1
1p-Del	Amp_20q12	0.993	1
20p-Del	Del_8p23.2	0.993	1
21q-Del	Del_5q21.2	0.993	1
22q-Del	Del_8q11.1	0.993	1
22q-Del	Del_12p13.1	0.993	1
4p-Del	Amp_20q13.12	0.993	1
4p-Del	Del_7q31.1	0.993	1
4q-Del	Del_16q23.1	0.993	1
5q-Del	Amp_13q12.2	0.993	1
8p-Del	Del_5q23.3	0.993	1
Amp_1q31.1	Del_2p12	0.993	1
Amp_6p21.1	Del_4q22.1	0.993	1
Amp_13q12.2	Amp_19q12	0.993	1
Amp_13q22.1	Amp_19q12	0.993	1
Amp_17q24.1	Amp_20p11.21	0.993	1
Amp_17q24.1	Del_18q22.1	0.993	1
Amp_20p11.21	Del_15q22.33	0.993	1
Amp_20q11.21	Del_1p33	0.993	1
Amp_20q13.12	Del_1p33	0.993	1
Del_1p36.11	Del_6p25.3	0.993	1
Del_1p33	Del_6q26	0.993	1
Del_3p26.3	Del_18p11.31	0.993	1
Del_4q22.1	Del_16q23.1	0.993	1
Del_4q22.1	Del_21q11.2	0.993	1
Del_5q22.2	Del_8p23.2	0.993	1
Del_8p23.2	Del_10q21.1	0.993	1
Del_16p13.3	Del_18q21.2	0.993	1
Del_16p13.3	Del_21q21.1	0.993	1
Del_17q24.3	Del_21q11.2	0.993	1
APC	TP53	0.994	1
APC	CDH1	0.994	1
APC	18q-Del	0.994	1
APC	Del_1p36.11	0.994	1
ARID1A	RLIM	0.994	1
ARID1A	MPHOSPH10	0.994	1
ARID1A	Del_12p13.1	0.994	1
CRIPAK	CDH1	0.994	1
CRIPAK	BCOR	0.994	1
RNF43	MAPK6	0.994	1
TP53	Del_5q22.2	0.994	1
TP53	Del_14q11.2	0.994	1
FAM123B	DIP2B	0.994	1
FAM123B	L1TD1	0.994	1
SOX9	ACVR1B	0.994	1
SOX9	MLH1	0.994	1
B2M	CHUK	0.994	1
TXNDC2	NLRC4	0.994	1
TXNDC2	DDX26B	0.994	1
TXNDC2	ATM	0.994	1
ACVR1B	MVK	0.994	1
CDH1	GRB2	0.994	1
MLH1	BCOR	0.994	1
MLH1	THOC7	0.994	1
BCOR	WNT1	0.994	1
BCOR	RHOA	0.994	1
BCOR	ZNF486	0.994	1
SMAD2	PTGDR	0.994	1
FMN2	CREBBP	0.994	1
STARD3NL	IFT57	0.994	1
NF2	ASXL1	0.994	1
MAPK6	L1TD1	0.994	1
RHOA	LARP4B	0.994	1
EGR1	DDX26B	0.994	1
PRKDC	IFT57	0.994	1
PRKDC	RBBP7	0.994	1
PRKDC	GMPS	0.994	1
RPTN	ERBB2	0.994	1
CHUK	RBBP7	0.994	1
CHUK	CTNNB1	0.994	1
ATXN3L	TPRKB	0.994	1
ATXN3L	C2orf29	0.994	1
ATXN3L	HIST1H1T	0.994	1
MGA	GMNN	0.994	1
MVK	SETD2	0.994	1
BCL9	P2RY13	0.994	1
BCL9	DCLK2	0.994	1
BCL9	FYN	0.994	1
ERBB2	CREBBP	0.994	1
P2RY13	NLRC4	0.994	1
P2RY13	PTEN	0.994	1
ST3GAL6	DDX26B	0.994	1
IQCD	LARP4B	0.994	1
IQCD	BIRC3	0.994	1
PLEKHF2	DDX26B	0.994	1
ALPK2	PRPS1	0.994	1
ALPK2	PTGDR	0.994	1
ASXL1	ATM	0.994	1
GRB2	RLIM	0.994	1
GRB2	MPHOSPH10	0.994	1
NLRC4	BIRC3	0.994	1
C11orf30	RBPJ	0.994	1
DIP2B	ZNF486	0.994	1
PRRG1	KDM6A	0.994	1
PIK3R1	BMPR2	0.994	1
IFT57	DCLK2	0.994	1
IFT57	GPATCH8	0.994	1
IFT57	BIRC3	0.994	1
ROS1	CDK12	0.994	1
VCX2	Del_5q21.2	0.994	1
C2orf29	L1TD1	0.994	1
C2orf29	NEXN	0.994	1
DCLK2	PTEN	0.994	1
FKBP9	NEXN	0.994	1
PTEN	HLA-A	0.994	1
PTEN	BIRC3	0.994	1
PTEN	CREBBP	0.994	1
FYN	ZNF486	0.994	1
SLC12A6	BIRC3	0.994	1
PTGDR	ATM	0.994	1
12p-Amp	Amp_20p11.21	0.994	1
16p-Amp	Amp_6p21.1	0.994	1
16p-Amp	Amp_17q24.1	0.994	1
20p-Amp	Amp_2q33.1	0.994	1
20q-Amp	Amp_16p11.2	0.994	1
2p-Amp	Amp_20p12.1	0.994	1
2q-Amp	6p-Amp	0.994	1
2q-Amp	Amp_20p12.1	0.994	1
6p-Amp	Amp_5p12	0.994	1
6p-Amp	Amp_15q26.1	0.994	1
7p-Amp	Amp_17q24.1	0.994	1
7q-Amp	Amp_17q24.1	0.994	1
14q-Del	Del_5q12.1	0.994	1
18q-Del	Del_8q11.1	0.994	1
20p-Del	21q-Del	0.994	1
20p-Del	Del_16p13.3	0.994	1
20p-Del	Del_21q21.1	0.994	1
21q-Del	Del_12p13.1	0.994	1
4p-Del	Del_3p14.2	0.994	1
4p-Del	Del_16p13.3	0.994	1
5q-Del	Del_10q21.1	0.994	1
Amp_2q33.1	Amp_8q24.21	0.994	1
Amp_2q33.1	Amp_20p11.21	0.994	1
Amp_6p21.1	Amp_16p11.2	0.994	1
Amp_6p21.1	Del_8q11.1	0.994	1
Amp_8q24.21	Amp_19q12	0.994	1
Amp_11p15.5	Amp_20p12.1	0.994	1
Amp_11p15.5	Del_1p13.2	0.994	1
Amp_13q12.2	Del_21q11.2	0.994	1
Amp_16p11.2	Del_4p16.1	0.994	1
Amp_17q24.1	Del_2q22.1	0.994	1
Amp_20q11.21	Del_10q21.1	0.994	1
Del_1p36.11	Del_15q21.1	0.994	1
Del_1p13.2	Del_8p23.2	0.994	1
Del_2p12	Del_10q25.2	0.994	1
Del_3p26.3	Del_15q15.2	0.994	1
Del_3p26.3	Del_15q21.1	0.994	1
Del_3p26.3	Del_21q21.1	0.994	1
Del_4q22.1	Del_21q21.1	0.994	1
Del_6q26	Del_8p23.2	0.994	1
Del_8p23.2	Del_12p13.1	0.994	1
Del_16p13.3	Del_18q22.1	0.994	1
APC	20q-Amp	0.995	1
ARID1A	CRIPAK	0.995	1
RNF43	IQCD	0.995	1
RNF43	IFT57	0.995	1
TP53	Del_15q11.2	0.995	1
FAM123B	P2RY13	0.995	1
FAM123B	GPATCH8	0.995	1
FAM123B	BIRC3	0.995	1
ZFP36L2	BMPR2	0.995	1
ZFP36L2	CREBBP	0.995	1
ZFP36L2	Del_10q25.2	0.995	1
B2M	FBXW7	0.995	1
TXNDC2	ALPK2	0.995	1
ACVR1B	BCOR	0.995	1
ACVR1B	WNT1	0.995	1
CDH1	PRRG1	0.995	1
CDH1	CDK12	0.995	1
MLH1	STARD3NL	0.995	1
MLH1	P2RY13	0.995	1
MLH1	ALPK2	0.995	1
MLH1	FYN	0.995	1
BCOR	NEXN	0.995	1
SMAD2	RBBP7	0.995	1
WNT1	KDM6A	0.995	1
FMN2	TPRKB	0.995	1
GGT1	SELPLG	0.995	1
GGT1	Amp_8q24.21	0.995	1
GGT1	Amp_12p13.33	0.995	1
GGT1	Del_8p23.2	0.995	1
GGT1	Del_21q21.1	0.995	1
STARD3NL	EGR1	0.995	1
STARD3NL	RB1	0.995	1
SELPLG	MAPK6	0.995	1
OR4D10	CHUK	0.995	1
NF2	IQCD	0.995	1
NF2	RBPJ	0.995	1
NF2	GMPS	0.995	1
NF2	ZNF486	0.995	1
MAPK6	FKBP9	0.995	1
MAPK6	ATM	0.995	1
FAM9A	HLA-A	0.995	1
FAM9A	BMPR2	0.995	1
FAM9A	GMPS	0.995	1
EGR1	P2RY13	0.995	1
PRKDC	PLAGL2	0.995	1
RPTN	NF1	0.995	1
RPTN	CREBBP	0.995	1
THOC7	GMNN	0.995	1
NF1	ASXL1	0.995	1
NF1	L1TD1	0.995	1
NF1	BCORL1	0.995	1
NF1	GMPS	0.995	1
CHUK	BCL9	0.995	1
CHUK	SLC12A6	0.995	1
ATXN3L	RLIM	0.995	1
ATXN3L	LARP4B	0.995	1
MGA	PRRG1	0.995	1
TPRKB	C2orf29	0.995	1
MVK	ZNF486	0.995	1
BCL9	PRRG1	0.995	1
ZBTB20	MPHOSPH10	0.995	1
ERBB2	C11orf30	0.995	1
P2RY13	ST3GAL6	0.995	1
P2RY13	PLEKHF2	0.995	1
ST3GAL6	NR1H3	0.995	1
ST3GAL6	BIRC3	0.995	1
IQCD	PRRG1	0.995	1
PLEKHF2	NR1H3	0.995	1
PLEKHF2	GPATCH8	0.995	1
PLEKHF2	CDK12	0.995	1
ALPK2	TOP2B	0.995	1
ALPK2	ZNF486	0.995	1
ALG12	KDM6A	0.995	1
ALG12	Del_16q23.1	0.995	1
PTCH1	C14orf184	0.995	1
PTCH1	BIRC3	0.995	1
GRB2	RBPJ	0.995	1
GRB2	RBBP7	0.995	1
GRB2	GMNN	0.995	1
NLRC4	C11orf30	0.995	1
DIP2B	NEXN	0.995	1
PRRG1	ZNF486	0.995	1
PIK3R1	RBPJ	0.995	1
PIK3R1	HLA-A	0.995	1
IFT57	PTEN	0.995	1
IFT57	CTNNB1	0.995	1
RSPH3	GMNN	0.995	1
C2orf29	SETD2	0.995	1
C2orf29	12q-Amp	0.995	1
SLC26A8	ALDH1A3	0.995	1
RBBP7	ATM	0.995	1
RB1	C14orf184	0.995	1
FKBP9	ALDH1A3	0.995	1
PTEN	ZNF486	0.995	1
C14orf184	ATM	0.995	1
C14orf184	2p-Amp	0.995	1
C14orf184	6p-Amp	0.995	1
ALDH1A3	HIST1H1T	0.995	1
BCORL1	CDK12	0.995	1
MAP4K3	CREBBP	0.995	1
SETD2	CTNNB1	0.995	1
GMPS	CREBBP	0.995	1
HIST1H1T	CTNNB1	0.995	1
ZNF486	CREBBP	0.995	1
ZNF486	Del_16q23.1	0.995	1
12p-Amp	8q-Amp	0.995	1
12p-Amp	Amp_16p11.2	0.995	1
12p-Amp	Del_7q31.1	0.995	1
12q-Amp	Amp_1q31.1	0.995	1
13q-Amp	17q-Amp	0.995	1
13q-Amp	2p-Amp	0.995	1
13q-Amp	Amp_5p12	0.995	1
13q-Amp	Del_8q11.1	0.995	1
13q-Amp	Del_15q21.1	0.995	1
16p-Amp	Amp_20p12.1	0.995	1
16p-Amp	Del_8p22	0.995	1
17q-Amp	Del_8p22	0.995	1
20p-Amp	14q-Del	0.995	1
20p-Amp	Amp_17q12	0.995	1
20q-Amp	Del_4p16.1	0.995	1
2q-Amp	Amp_6p21.1	0.995	1
8q-Amp	Del_5q22.2	0.995	1
9p-Amp	18q-Del	0.995	1
14q-Del	5q-Del	0.995	1
15q-Del	Del_3p26.3	0.995	1
17p-Del	Del_2q22.1	0.995	1
17p-Del	Del_6p25.3	0.995	1
18p-Del	Amp_8q24.21	0.995	1
18q-Del	Amp_17q12	0.995	1
1p-Del	20p-Del	0.995	1
1p-Del	Del_3q26.31	0.995	1
20p-Del	Amp_13q22.1	0.995	1
20p-Del	Del_15q11.2	0.995	1
21q-Del	Amp_20q11.21	0.995	1
4p-Del	Amp_20q11.21	0.995	1
4q-Del	Del_7q31.1	0.995	1
Amp_1q31.1	Amp_13q12.13	0.995	1
Amp_6p21.1	Amp_12p13.33	0.995	1
Amp_6p21.1	Amp_15q26.1	0.995	1
Amp_6p21.1	Amp_17q24.1	0.995	1
Amp_13q12.2	Del_1p33	0.995	1
Amp_13q22.1	Del_1p33	0.995	1
Amp_17q12	Del_19p13.3	0.995	1
Amp_17q24.1	Amp_20q12	0.995	1
Del_1p36.11	Del_3p26.3	0.995	1
Del_1p36.11	Del_15q15.2	0.995	1
Del_1p13.2	Del_5q23.3	0.995	1
Del_2q22.1	Del_10q25.2	0.995	1
Del_5q12.1	Del_15q21.1	0.995	1
ARID1A	MAP4K3	0.996	1
RNF43	CHUK	0.996	1
TP53	SMAD4	0.996	1
FAM123B	C11orf30	0.996	1
FAM123B	SLC26A8	0.996	1
FAM123B	CREBBP	0.996	1
B2M	TPRKB	0.996	1
B2M	NEXN	0.996	1
TXNDC2	CDH1	0.996	1
TXNDC2	NR1H3	0.996	1
TXNDC2	RB1	0.996	1
ACVR1B	MLH1	0.996	1
ACVR1B	L1TD1	0.996	1
CDH1	RBBP7	0.996	1
MLH1	SELPLG	0.996	1
MLH1	CHUK	0.996	1
MLH1	PIK3R1	0.996	1
MLH1	C2orf29	0.996	1
MLH1	FKBP9	0.996	1
BCOR	EGR1	0.996	1
BCOR	FBXW7	0.996	1
BCOR	ALPK2	0.996	1
BCOR	ASXL1	0.996	1
BCOR	C2orf29	0.996	1
BCOR	ALDH1A3	0.996	1
BCOR	ATM	0.996	1
SMAD2	OR4D10	0.996	1
SMAD2	BCL9	0.996	1
WNT1	BCORL1	0.996	1
WNT1	CTNNB1	0.996	1
FMN2	CDK12	0.996	1
GGT1	GMNN	0.996	1
GGT1	7q-Amp	0.996	1
STARD3NL	CHUK	0.996	1
STARD3NL	ROS1	0.996	1
STARD3NL	TOP2B	0.996	1
SELPLG	PRPS1	0.996	1
OR4D10	GRB2	0.996	1
OR4D10	BMPR2	0.996	1
NF2	PRPS1	0.996	1
MAPK6	PRPS1	0.996	1
RHOA	ZNF486	0.996	1
FAM9A	PTEN	0.996	1
EGR1	MVK	0.996	1
EGR1	DIP2B	0.996	1
PRKDC	NEXN	0.996	1
PRKDC	PTGDR	0.996	1
RPTN	TPRKB	0.996	1
RPTN	L1TD1	0.996	1
RPTN	NEXN	0.996	1
THOC7	PTEN	0.996	1
FBXW7	CREBBP	0.996	1
CHUK	BIRC3	0.996	1
ATXN3L	PRPS1	0.996	1
ATXN3L	PTGDR	0.996	1
TPRKB	RBBP7	0.996	1
TPRKB	GMNN	0.996	1
TPRKB	Amp_1q31.1	0.996	1
MVK	ST3GAL6	0.996	1
BCL9	PTEN	0.996	1
ZBTB20	RBPJ	0.996	1
ZBTB20	RBBP7	0.996	1
ST3GAL6	PIK3R1	0.996	1
ST3GAL6	8p-Amp	0.996	1
IQCD	ZNF486	0.996	1
PLEKHF2	DIP2B	0.996	1
PLEKHF2	LARP4B	0.996	1
NR1H3	TOP2B	0.996	1
ASXL1	MPHOSPH10	0.996	1
ALG12	BCORL1	0.996	1
PTCH1	LARP4B	0.996	1
PTCH1	PTGDR	0.996	1
GRB2	PTEN	0.996	1
NLRC4	C14orf184	0.996	1
PLAGL2	PTGDR	0.996	1
C11orf30	FYN	0.996	1
IFT57	SETD2	0.996	1
RSPH3	PTEN	0.996	1
RLIM	C2orf29	0.996	1
ROS1	NEXN	0.996	1
MPHOSPH10	SLC26A8	0.996	1
MPHOSPH10	ALDH1A3	0.996	1
RBPJ	L1TD1	0.996	1
RBPJ	MAP4K3	0.996	1
RBPJ	NEXN	0.996	1
SMAD4	LARP4B	0.996	1
SLC26A8	PRPS1	0.996	1
SLC26A8	PTGDR	0.996	1
RBBP7	MAP4K3	0.996	1
L1TD1	HLA-A	0.996	1
L1TD1	PTGDR	0.996	1
L1TD1	KDM6A	0.996	1
TOP2B	FYN	0.996	1
TOP2B	GPATCH8	0.996	1
TOP2B	SETD2	0.996	1
TOP2B	BIRC3	0.996	1
FKBP9	PTGDR	0.996	1
PTEN	LARP4B	0.996	1
PTEN	BCORL1	0.996	1
C14orf184	CTNNB1	0.996	1
BMPR2	HIST1H1T	0.996	1
ALDH1A3	PRPS1	0.996	1
ALDH1A3	CTNNB1	0.996	1
NEXN	GMPS	0.996	1
NEXN	PTGDR	0.996	1
NEXN	KDM6A	0.996	1
GMPS	HIST1H1T	0.996	1
PRPS1	Del_16p13.3	0.996	1
PTGDR	CREBBP	0.996	1
HIST1H1T	GMNN	0.996	1
HIST1H1T	Del_1p33	0.996	1
16p-Amp	17q-Amp	0.996	1
16q-Amp	Del_19p13.3	0.996	1
17q-Amp	Amp_13q22.1	0.996	1
17q-Amp	Amp_16p11.2	0.996	1
20p-Amp	6p-Amp	0.996	1
20q-Amp	Del_10q21.1	0.996	1
2p-Amp	7p-Amp	0.996	1
2q-Amp	7p-Amp	0.996	1
6p-Amp	Amp_8p11.23	0.996	1
7p-Amp	Amp_15q26.1	0.996	1
7q-Amp	18p-Del	0.996	1
7q-Amp	Amp_2q33.1	0.996	1
14q-Del	Del_21q11.2	0.996	1
1p-Del	Del_14q11.2	0.996	1
1p-Del	Del_16p13.3	0.996	1
20p-Del	Del_5q22.2	0.996	1
21q-Del	Del_10q21.1	0.996	1
4p-Del	Del_10q25.2	0.996	1
5q-Del	Del_4p16.1	0.996	1
5q-Del	Del_22q13.32	0.996	1
8p-Del	Del_5q12.1	0.996	1
Amp_2q33.1	Del_7q31.1	0.996	1
Amp_5p12	Amp_13q12.2	0.996	1
Amp_6p21.1	Del_6q26	0.996	1
Amp_8p11.23	Amp_13q12.13	0.996	1
Amp_8p11.23	Amp_20p12.1	0.996	1
Amp_8p11.21	Amp_20p12.1	0.996	1
Amp_8q24.21	Amp_13q12.13	0.996	1
Amp_10q22.3	Del_1p13.2	0.996	1
Amp_15q26.1	Amp_17q12	0.996	1
Amp_15q26.1	Del_2p12	0.996	1
Amp_20p12.1	Del_8p22	0.996	1
Del_1p36.11	Del_5q12.1	0.996	1
Del_1p36.11	Del_5q21.2	0.996	1
Del_1p33	Del_5q21.2	0.996	1
Del_2p12	Del_4q22.1	0.996	1
Del_2p12	Del_7q31.1	0.996	1
Del_2p12	Del_17q24.3	0.996	1
Del_2q22.1	Del_5q21.2	0.996	1
Del_3p26.3	Del_6q26	0.996	1
Del_3p26.3	Del_19p13.3	0.996	1
Del_3q26.31	Del_7q31.1	0.996	1
Del_3q26.31	Del_8q11.1	0.996	1
Del_4p16.1	Del_5q22.2	0.996	1
Del_5q12.1	Del_16p13.3	0.996	1
Del_5q12.1	Del_18p11.31	0.996	1
Del_5q12.1	Del_22q13.32	0.996	1
Del_5q22.2	Del_8p22	0.996	1
Del_8p23.2	Del_17q24.3	0.996	1
Del_12p13.1	Del_21q21.1	0.996	1
Del_15q15.2	Del_17q24.3	0.996	1
Del_15q15.2	Del_21q11.2	0.996	1
Del_15q21.1	Del_17q24.3	0.996	1
APC	Amp_20q13.12	0.997	1
APC	Del_18q21.2	0.997	1
ARID1A	TOP2B	0.997	1
ARID1A	NEXN	0.997	1
RNF43	B2M	0.997	1
TP53	20p-Amp	0.997	1
FAM123B	CDK12	0.997	1
FAM123B	ATM	0.997	1
SOX9	C2orf29	0.997	1
ZFP36L2	C2orf29	0.997	1
ZFP36L2	ALDH1A3	0.997	1
B2M	MAPK6	0.997	1
B2M	SETD2	0.997	1
TXNDC2	NF2	0.997	1
TXNDC2	CDK12	0.997	1
ACVR1B	EGR1	0.997	1
CDH1	CHUK	0.997	1
CDH1	MGA	0.997	1
CDH1	NEXN	0.997	1
CDH1	HIST1H1T	0.997	1
CDH1	CREBBP	0.997	1
MLH1	PLAGL2	0.997	1
BCOR	BCORL1	0.997	1
SMAD2	P2RY13	0.997	1
SMAD2	ALPK2	0.997	1
SMAD2	BIRC3	0.997	1
WNT1	CHUK	0.997	1
WNT1	C11orf30	0.997	1
FMN2	ALPK2	0.997	1
FMN2	RBBP7	0.997	1
FMN2	HLA-A	0.997	1
GGT1	16q-Amp	0.997	1
GGT1	7p-Amp	0.997	1
GGT1	Del_15q11.2	0.997	1
STARD3NL	FAM9A	0.997	1
STARD3NL	PRKDC	0.997	1
STARD3NL	ZBTB20	0.997	1
STARD3NL	RSPH3	0.997	1
STARD3NL	MAP4K3	0.997	1
STARD3NL	HIST1H1T	0.997	1
SELPLG	PRKDC	0.997	1
SELPLG	ROS1	0.997	1
SELPLG	RBBP7	0.997	1
SELPLG	GMPS	0.997	1
OR4D10	TPRKB	0.997	1
OR4D10	L1TD1	0.997	1
OR4D10	NEXN	0.997	1
OR4D10	ATM	0.997	1
NF2	MGA	0.997	1
NF2	ST3GAL6	0.997	1
MAPK6	RBPJ	0.997	1
MAPK6	RBBP7	0.997	1
MAPK6	HLA-A	0.997	1
MAPK6	GMPS	0.997	1
MAPK6	Del_16q23.1	0.997	1
RHOA	ST3GAL6	0.997	1
RHOA	NLRC4	0.997	1
RHOA	TOP2B	0.997	1
RHOA	SLC12A6	0.997	1
FAM9A	NF1	0.997	1
FAM9A	MVK	0.997	1
FAM9A	P2RY13	0.997	1
FAM9A	PRRG1	0.997	1
FAM9A	GPATCH8	0.997	1
EGR1	ATM	0.997	1
PRKDC	P2RY13	0.997	1
PRKDC	ST3GAL6	0.997	1
PRKDC	DCLK2	0.997	1
PRKDC	ALDH1A3	0.997	1
RPTN	RB1	0.997	1
THOC7	BIRC3	0.997	1
THOC7	16q-Amp	0.997	1
FBXW7	PRRG1	0.997	1
FBXW7	FKBP9	0.997	1
CHUK	ALPK2	0.997	1
ATXN3L	BCL9	0.997	1
ATXN3L	PTCH1	0.997	1
ATXN3L	DDX26B	0.997	1
ATXN3L	PTEN	0.997	1
ATXN3L	CREBBP	0.997	1
MGA	IFT57	0.997	1
MGA	ZNF486	0.997	1
MVK	C11orf30	0.997	1
MVK	RB1	0.997	1
MVK	TOP2B	0.997	1
MVK	ATM	0.997	1
BCL9	DIP2B	0.997	1
BCL9	LARP4B	0.997	1
BCL9	ZNF486	0.997	1
ZBTB20	P2RY13	0.997	1
ZBTB20	NR1H3	0.997	1
ZBTB20	PIK3R1	0.997	1
P2RY13	CTNNB1	0.997	1
ST3GAL6	SETD2	0.997	1
ST3GAL6	ZNF486	0.997	1
PLEKHF2	ASXL1	0.997	1
PLEKHF2	IFT57	0.997	1
NR1H3	CTNNB1	0.997	1
ASXL1	BMPR2	0.997	1
ASXL1	KDM6A	0.997	1
ALG12	TOP2B	0.997	1
PTCH1	C11orf30	0.997	1
PTCH1	GMPS	0.997	1
GRB2	DIP2B	0.997	1
GRB2	PRRG1	0.997	1
NLRC4	MAP4K3	0.997	1
NLRC4	NEXN	0.997	1
NLRC4	ZNF486	0.997	1
PLAGL2	PTEN	0.997	1
PLAGL2	KDM6A	0.997	1
PLAGL2	Del_16q23.1	0.997	1
C11orf30	PRRG1	0.997	1
DIP2B	RLIM	0.997	1
PIK3R1	SETD2	0.997	1
PIK3R1	SLC12A6	0.997	1
IFT57	TOP2B	0.997	1
RSPH3	FYN	0.997	1
RLIM	PTGDR	0.997	1
ROS1	FKBP9	0.997	1
MPHOSPH10	PTEN	0.997	1
MPHOSPH10	PRPS1	0.997	1
MPHOSPH10	CTNNB1	0.997	1
DDX26B	MAP4K3	0.997	1
DDX26B	CREBBP	0.997	1
RBPJ	SLC26A8	0.997	1
RBPJ	RB1	0.997	1
RBPJ	PTGDR	0.997	1
SMAD4	SETD2	0.997	1
SLC26A8	RBBP7	0.997	1
RBBP7	CDK12	0.997	1
RB1	HLA-A	0.997	1
L1TD1	BCORL1	0.997	1
L1TD1	CREBBP	0.997	1
DCLK2	MAP4K3	0.997	1
DCLK2	HIST1H1T	0.997	1
HLA-A	ALDH1A3	0.997	1
HLA-A	PRPS1	0.997	1
ALDH1A3	GMPS	0.997	1
LARP4B	SLC12A6	0.997	1
GPATCH8	IDH1	0.997	1
MAP4K3	SLC12A6	0.997	1
MAP4K3	BIRC3	0.997	1
SETD2	GMPS	0.997	1
CDK12	GMPS	0.997	1
NEXN	CREBBP	0.997	1
GMPS	PTGDR	0.997	1
PTGDR	GMNN	0.997	1
ATM	GMNN	0.997	1
CREBBP	KDM6A	0.997	1
CTNNB1	KDM6A	0.997	1
12p-Amp	6p-Amp	0.997	1
12p-Amp	Amp_5p12	0.997	1
12q-Amp	Amp_5p12	0.997	1
13q-Amp	Del_4p16.1	0.997	1
13q-Amp	Del_12p13.1	0.997	1
16p-Amp	20p-Amp	0.997	1
16p-Amp	Amp_12p13.33	0.997	1
16p-Amp	Amp_17q12	0.997	1
16q-Amp	20p-Amp	0.997	1
17q-Amp	Amp_8q24.21	0.997	1
20p-Amp	Del_17p12	0.997	1
20q-Amp	4p-Del	0.997	1
20q-Amp	Del_4q35.1	0.997	1
2p-Amp	Amp_19q12	0.997	1
2q-Amp	Amp_19q12	0.997	1
6p-Amp	Amp_19q12	0.997	1
7p-Amp	Del_3q26.31	0.997	1
7q-Amp	18q-Del	0.997	1
7q-Amp	Del_5q21.2	0.997	1
8q-Amp	Amp_13q12.2	0.997	1
8q-Amp	Del_5q21.2	0.997	1
14q-Del	Amp_20p11.21	0.997	1
15q-Del	Amp_20p11.21	0.997	1
15q-Del	Del_8q11.1	0.997	1
17p-Del	Amp_8q24.21	0.997	1
18p-Del	Del_3p26.3	0.997	1
18q-Del	Del_3p26.3	0.997	1
1p-Del	Del_3p14.2	0.997	1
1p-Del	Del_5q12.1	0.997	1
20p-Del	Del_14q11.2	0.997	1
20p-Del	Del_15q15.2	0.997	1
20p-Del	Del_15q21.1	0.997	1
21q-Del	Amp_20q12	0.997	1
21q-Del	Amp_20q13.12	0.997	1
21q-Del	Del_17q24.3	0.997	1
22q-Del	Del_5q21.2	0.997	1
22q-Del	Del_16p13.3	0.997	1
5q-Del	Del_15q11.2	0.997	1
5q-Del	Del_18p11.31	0.997	1
8p-Del	Amp_13q12.13	0.997	1
8p-Del	Del_1p36.11	0.997	1
8p-Del	Del_6q26	0.997	1
Amp_2q33.1	Amp_15q26.1	0.997	1
Amp_5p12	Amp_8q24.21	0.997	1
Amp_5p12	Amp_20q13.12	0.997	1
Amp_5p12	Del_5q21.2	0.997	1
Amp_5p12	Del_5q23.3	0.997	1
Amp_6p21.1	Amp_17q12	0.997	1
Amp_6p21.1	Del_3p14.2	0.997	1
Amp_10q22.3	Del_19p13.3	0.997	1
Amp_11p15.5	Del_1p36.11	0.997	1
Amp_11p15.5	Del_10q21.1	0.997	1
Amp_12p13.33	Del_7q31.1	0.997	1
Amp_13q12.13	Del_19p13.3	0.997	1
Amp_13q12.2	Del_8q11.1	0.997	1
Amp_13q22.1	Del_15q21.1	0.997	1
Amp_13q22.1	Del_21q11.2	0.997	1
Amp_15q26.1	Amp_19q12	0.997	1
Amp_20p11.21	Del_15q11.2	0.997	1
Amp_20q12	Del_1p33	0.997	1
Del_1p36.11	Del_5q22.2	0.997	1
Del_1p33	Del_3p14.2	0.997	1
Del_1p33	Del_14q11.2	0.997	1
Del_1p13.2	Del_5q21.2	0.997	1
Del_1p13.2	Del_5q22.2	0.997	1
Del_2p12	Del_8p22	0.997	1
Del_2p12	Del_16q23.1	0.997	1
Del_2p12	Del_21q21.1	0.997	1
Del_2q22.1	Del_10q21.1	0.997	1
Del_2q22.1	Del_17q24.3	0.997	1
Del_3p14.2	Del_6p25.3	0.997	1
Del_4p16.1	Del_10q25.2	0.997	1
Del_4q22.1	Del_10q23.31	0.997	1
Del_5q12.1	Del_15q11.2	0.997	1
Del_5q21.2	Del_15q22.33	0.997	1
Del_5q22.2	Del_10q21.1	0.997	1
Del_5q23.3	Del_10q21.1	0.997	1
Del_5q23.3	Del_21q11.2	0.997	1
Del_6q26	Del_12p13.1	0.997	1
Del_8p22	Del_12p13.1	0.997	1
Del_8p22	Del_17q24.3	0.997	1
Del_8q11.1	Del_16p13.3	0.997	1
Del_14q11.2	Del_21q21.1	0.997	1
Del_15q11.2	Del_19p13.3	0.997	1
APC	13q-Amp	0.998	1
APC	Amp_13q22.1	0.998	1
APC	Del_18q12.2	0.998	1
ARID1A	FAM123B	0.998	1
ARID1A	MLH1	0.998	1
ARID1A	CHUK	0.998	1
ARID1A	DIP2B	0.998	1
ARID1A	FKBP9	0.998	1
CRIPAK	ZFP36L2	0.998	1
CRIPAK	PTCH1	0.998	1
CRIPAK	HIST1H1T	0.998	1
RNF43	ATXN3L	0.998	1
RNF43	ASXL1	0.998	1
RNF43	ALG12	0.998	1
RNF43	RSPH3	0.998	1
RNF43	NEXN	0.998	1
TP53	22q-Del	0.998	1
TP53	Del_4q22.1	0.998	1
FAM123B	PRKDC	0.998	1
FAM123B	ERBB2	0.998	1
FAM123B	ASXL1	0.998	1
FAM123B	RBPJ	0.998	1
FAM123B	RBBP7	0.998	1
ZFP36L2	LARP4B	0.998	1
B2M	BCOR	0.998	1
B2M	RPTN	0.998	1
B2M	RBPJ	0.998	1
B2M	RBBP7	0.998	1
B2M	GMPS	0.998	1
B2M	KDM6A	0.998	1
TXNDC2	PLEKHF2	0.998	1
TXNDC2	CTNNB1	0.998	1
ACVR1B	TPRKB	0.998	1
ACVR1B	BCL9	0.998	1
ACVR1B	NLRC4	0.998	1
ACVR1B	RSPH3	0.998	1
CDH1	WNT1	0.998	1
CDH1	BCL9	0.998	1
CDH1	DCLK2	0.998	1
CDH1	GPATCH8	0.998	1
MLH1	ERBB2	0.998	1
MLH1	IQCD	0.998	1
MLH1	ASXL1	0.998	1
MLH1	RBPJ	0.998	1
MLH1	RBBP7	0.998	1
MLH1	HLA-A	0.998	1
MLH1	PTGDR	0.998	1
MLH1	ZNF486	0.998	1
BCOR	TPRKB	0.998	1
BCOR	DDX26B	0.998	1
BCOR	GMPS	0.998	1
SMAD2	C11orf30	0.998	1
SMAD2	ROS1	0.998	1
WNT1	SLC26A8	0.998	1
WNT1	ALDH1A3	0.998	1
FMN2	OR4D10	0.998	1
FMN2	NF2	0.998	1
FMN2	EGR1	0.998	1
FMN2	PIK3R1	0.998	1
FMN2	ROS1	0.998	1
FMN2	VCX2	0.998	1
FMN2	SMAD4	0.998	1
GGT1	18p-Del	0.998	1
STARD3NL	PIK3R1	0.998	1
STARD3NL	SLC26A8	0.998	1
STARD3NL	CDK12	0.998	1
SELPLG	NF2	0.998	1
SELPLG	NLRC4	0.998	1
OR4D10	ALPK2	0.998	1
OR4D10	DIP2B	0.998	1
OR4D10	RLIM	0.998	1
OR4D10	SETD2	0.998	1
OR4D10	PTGDR	0.998	1
NF2	CHUK	0.998	1
NF2	ERBB2	0.998	1
NF2	P2RY13	0.998	1
MAPK6	BCL9	0.998	1
MAPK6	DDX26B	0.998	1
MAPK6	SLC12A6	0.998	1
RHOA	RSPH3	0.998	1
FAM9A	RB1	0.998	1
EGR1	ST3GAL6	0.998	1
PRKDC	GRB2	0.998	1
PRKDC	PRRG1	0.998	1
PRKDC	SMAD4	0.998	1
RPTN	RBBP7	0.998	1
RPTN	LARP4B	0.998	1
NF1	FBXW7	0.998	1
NF1	IFT57	0.998	1
NF1	RLIM	0.998	1
NF1	MPHOSPH10	0.998	1
NF1	LARP4B	0.998	1
NF1	6p-Amp	0.998	1
FBXW7	Del_7q31.1	0.998	1
CHUK	PLAGL2	0.998	1
CHUK	L1TD1	0.998	1
CHUK	NEXN	0.998	1
CHUK	IDH1	0.998	1
ATXN3L	ALG12	0.998	1
ATXN3L	TOP2B	0.998	1
ATXN3L	BMPR2	0.998	1
ATXN3L	FYN	0.998	1
ATXN3L	Del_10q25.2	0.998	1
MGA	RBBP7	0.998	1
MGA	HLA-A	0.998	1
MGA	GMPS	0.998	1
TPRKB	LARP4B	0.998	1
MVK	L1TD1	0.998	1
BCL9	ASXL1	0.998	1
BCL9	MPHOSPH10	0.998	1
ZBTB20	PTEN	0.998	1
ERBB2	PRRG1	0.998	1
ERBB2	SMAD4	0.998	1
P2RY13	L1TD1	0.998	1
P2RY13	CDK12	0.998	1
P2RY13	PRPS1	0.998	1
P2RY13	CREBBP	0.998	1
ST3GAL6	GRB2	0.998	1
ST3GAL6	SLC12A6	0.998	1
IQCD	C11orf30	0.998	1
IQCD	RSPH3	0.998	1
IQCD	ROS1	0.998	1
PLEKHF2	C11orf30	0.998	1
PLEKHF2	PTEN	0.998	1
PLEKHF2	BCORL1	0.998	1
PLEKHF2	SLC12A6	0.998	1
NR1H3	C2orf29	0.998	1
ALPK2	ASXL1	0.998	1
ALPK2	GRB2	0.998	1
ALPK2	DDX26B	0.998	1
ASXL1	SMAD4	0.998	1
ALG12	8p-Amp	0.998	1
PTCH1	GRB2	0.998	1
PTCH1	RSPH3	0.998	1
PTCH1	C2orf29	0.998	1
PTCH1	DDX26B	0.998	1
PTCH1	SLC26A8	0.998	1
GRB2	BCORL1	0.998	1
GRB2	SETD2	0.998	1
GRB2	ZNF486	0.998	1
NLRC4	RSPH3	0.998	1
NLRC4	MPHOSPH10	0.998	1
PLAGL2	C11orf30	0.998	1
PLAGL2	ROS1	0.998	1
C11orf30	IFT57	0.998	1
C11orf30	L1TD1	0.998	1
C11orf30	MAP4K3	0.998	1
C11orf30	CDK12	0.998	1
C11orf30	IDH1	0.998	1
DIP2B	DDX26B	0.998	1
DIP2B	HLA-A	0.998	1
DIP2B	GMPS	0.998	1
PRRG1	ROS1	0.998	1
PRRG1	HIST1H1T	0.998	1
PRRG1	IDH1	0.998	1
PRRG1	CTNNB1	0.998	1
PIK3R1	ROS1	0.998	1
PIK3R1	L1TD1	0.998	1
PIK3R1	TOP2B	0.998	1
PIK3R1	LARP4B	0.998	1
PIK3R1	GPATCH8	0.998	1
PIK3R1	BIRC3	0.998	1
RSPH3	RB1	0.998	1
RSPH3	SLC12A6	0.998	1
RLIM	ROS1	0.998	1
MPHOSPH10	BCORL1	0.998	1
MPHOSPH10	SLC12A6	0.998	1
MPHOSPH10	ATM	0.998	1
VCX2	Del_5q22.2	0.998	1
C2orf29	RB1	0.998	1
DDX26B	ALDH1A3	0.998	1
DDX26B	LARP4B	0.998	1
DDX26B	SETD2	0.998	1
RBPJ	RBBP7	0.998	1
SMAD4	ALDH1A3	0.998	1
SLC26A8	RB1	0.998	1
SLC26A8	FYN	0.998	1
SLC26A8	SLC12A6	0.998	1
SLC26A8	BIRC3	0.998	1
RBBP7	HLA-A	0.998	1
RBBP7	LARP4B	0.998	1
RBBP7	GMPS	0.998	1
RBBP7	CTNNB1	0.998	1
L1TD1	DCLK2	0.998	1
L1TD1	ATM	0.998	1
TOP2B	MAP4K3	0.998	1
TOP2B	NEXN	0.998	1
DCLK2	ALDH1A3	0.998	1
DCLK2	CDK12	0.998	1
FKBP9	FYN	0.998	1
PTEN	SETD2	0.998	1
PTEN	PRPS1	0.998	1
PTEN	IDH1	0.998	1
BMPR2	NEXN	0.998	1
BMPR2	PTGDR	0.998	1
BMPR2	KDM6A	0.998	1
BMPR2	Del_16q23.1	0.998	1
FYN	CDK12	0.998	1
FYN	NEXN	0.998	1
NEXN	ATM	0.998	1
PTGDR	CTNNB1	0.998	1
BIRC3	CREBBP	0.998	1
ATM	HIST1H1T	0.998	1
GMNN	Amp_15q26.1	0.998	1
12p-Amp	16p-Amp	0.998	1
12q-Amp	Amp_20p12.1	0.998	1
13q-Amp	Amp_1q31.1	0.998	1
13q-Amp	Amp_8p11.21	0.998	1
13q-Amp	Del_4q22.1	0.998	1
13q-Amp	Del_21q11.2	0.998	1
13q-Amp	Del_22q13.32	0.998	1
16p-Amp	Del_18q12.2	0.998	1
17q-Amp	Amp_6p21.1	0.998	1
17q-Amp	Amp_8p11.21	0.998	1
20q-Amp	Amp_17q24.1	0.998	1
20q-Amp	Del_21q11.2	0.998	1
7p-Amp	Del_15q15.2	0.998	1
7q-Amp	Del_17p12	0.998	1
7q-Amp	Del_18p11.31	0.998	1
7q-Amp	Del_18q12.2	0.998	1
7q-Amp	Del_18q21.2	0.998	1
8p-Amp	5q-Del	0.998	1
8p-Amp	Amp_20p11.21	0.998	1
8q-Amp	Amp_13q12.13	0.998	1
8q-Amp	Amp_17q24.1	0.998	1
8q-Amp	Del_17p12	0.998	1
8q-Amp	Del_18q12.2	0.998	1
8q-Amp	Del_18q22.1	0.998	1
9p-Amp	Amp_8q24.21	0.998	1
9p-Amp	Amp_20p12.1	0.998	1
9p-Amp	Del_18q22.1	0.998	1
18p-Del	Amp_17q12	0.998	1
18p-Del	Del_8q11.1	0.998	1
18q-Del	Del_10q21.1	0.998	1
18q-Del	Del_10q25.2	0.998	1
20p-Del	Del_4p16.1	0.998	1
20p-Del	Del_8p22	0.998	1
21q-Del	Del_2p12	0.998	1
21q-Del	Del_6q26	0.998	1
21q-Del	Del_15q15.2	0.998	1
21q-Del	Del_15q21.1	0.998	1
21q-Del	Del_19p13.3	0.998	1
22q-Del	Del_21q11.2	0.998	1
4q-Del	Amp_6p21.1	0.998	1
4q-Del	Del_10q25.2	0.998	1
Amp_2q33.1	Amp_12p13.33	0.998	1
Amp_2q33.1	Amp_17q24.1	0.998	1
Amp_5p12	Amp_19q12	0.998	1
Amp_5p12	Del_2p12	0.998	1
Amp_8q24.21	Amp_13q22.1	0.998	1
Amp_8q24.21	Del_2p12	0.998	1
Amp_10q22.3	Del_10q25.2	0.998	1
Amp_13q22.1	Del_15q22.33	0.998	1
Amp_13q22.1	Del_19p13.3	0.998	1
Amp_16p11.2	Amp_20q11.21	0.998	1
Amp_16p11.2	Del_8p22	0.998	1
Amp_17q12	Del_18p11.31	0.998	1
Amp_17q24.1	Amp_19q12	0.998	1
Amp_17q24.1	Del_8p22	0.998	1
Amp_19q12	Amp_20q11.21	0.998	1
Amp_20p12.1	Del_10q21.1	0.998	1
Amp_20q11.21	Del_4q35.1	0.998	1
Amp_20q11.21	Del_5q12.1	0.998	1
Amp_20q13.12	Del_4p16.1	0.998	1
Del_1p36.11	Del_5q23.3	0.998	1
Del_1p36.11	Del_6q26	0.998	1
Del_1p36.11	Del_15q11.2	0.998	1
Del_1p13.2	Del_5q12.1	0.998	1
Del_2p12	Del_4p16.1	0.998	1
Del_2p12	Del_8p23.2	0.998	1
Del_3p26.3	Del_4q35.1	0.998	1
Del_3p26.3	Del_14q11.2	0.998	1
Del_3p26.3	Del_15q22.33	0.998	1
Del_3q26.31	Del_6p25.3	0.998	1
Del_3q26.31	Del_19p13.3	0.998	1
Del_4p16.1	Del_21q11.2	0.998	1
Del_4p16.1	Del_21q21.1	0.998	1
Del_5q21.2	Del_10q25.2	0.998	1
Del_5q22.2	Del_15q21.1	0.998	1
Del_5q23.3	Del_19p13.3	0.998	1
Del_6p25.3	Del_17q24.3	0.998	1
Del_6q26	Del_15q21.1	0.998	1
Del_10q21.1	Del_15q22.33	0.998	1
Del_10q21.1	Del_17q24.3	0.998	1
Del_10q23.31	Del_16p13.3	0.998	1
Del_10q25.2	Del_18p11.31	0.998	1
Del_12p13.1	Del_22q13.32	0.998	1
Del_15q22.33	Del_21q11.2	0.998	1
APC	NF1	0.999	1
APC	Amp_13q12.13	0.999	1
APC	Amp_20q11.21	0.999	1
APC	Amp_20q12	0.999	1
ARID1A	B2M	0.999	1
ARID1A	EGR1	0.999	1
ARID1A	P2RY13	0.999	1
ARID1A	PRRG1	0.999	1
ARID1A	SMAD4	0.999	1
ARID1A	HLA-A	0.999	1
ARID1A	GPATCH8	0.999	1
ARID1A	GMPS	0.999	1
ARID1A	CREBBP	0.999	1
RNF43	CDH1	0.999	1
RNF43	NF2	0.999	1
RNF43	NF1	0.999	1
RNF43	C11orf30	0.999	1
RNF43	DIP2B	0.999	1
RNF43	PIK3R1	0.999	1
TP53	RPTN	0.999	1
TP53	13q-Amp	0.999	1
FAM123B	OR4D10	0.999	1
FAM123B	DCLK2	0.999	1
SOX9	ALG12	0.999	1
ZFP36L2	CDH1	0.999	1
ZFP36L2	NF2	0.999	1
ZFP36L2	FBXW7	0.999	1
ZFP36L2	MVK	0.999	1
ZFP36L2	ALG12	0.999	1
ZFP36L2	IFT57	0.999	1
ZFP36L2	BCORL1	0.999	1
B2M	OR4D10	0.999	1
B2M	P2RY13	0.999	1
B2M	PRRG1	0.999	1
TXNDC2	FMN2	0.999	1
TXNDC2	GGT1	0.999	1
TXNDC2	MAPK6	0.999	1
TXNDC2	TPRKB	0.999	1
TXNDC2	PTEN	0.999	1
ACVR1B	TOP2B	0.999	1
CDH1	ZBTB20	0.999	1
CDH1	ASXL1	0.999	1
CDH1	RBPJ	0.999	1
CDH1	TOP2B	0.999	1
CDH1	LARP4B	0.999	1
CDH1	PRPS1	0.999	1
CDH1	IDH1	0.999	1
CDH1	KDM6A	0.999	1
MLH1	OR4D10	0.999	1
MLH1	ATXN3L	0.999	1
MLH1	NR1H3	0.999	1
MLH1	ROS1	0.999	1
MLH1	DDX26B	0.999	1
MLH1	TOP2B	0.999	1
MLH1	SETD2	0.999	1
MLH1	CDK12	0.999	1
MLH1	BIRC3	0.999	1
BCOR	ATXN3L	0.999	1
BCOR	IQCD	0.999	1
BCOR	PRRG1	0.999	1
BCOR	FKBP9	0.999	1
BCOR	PTEN	0.999	1
BCOR	LARP4B	0.999	1
BCOR	MAP4K3	0.999	1
BCOR	SLC12A6	0.999	1
BCOR	BIRC3	0.999	1
BCOR	KDM6A	0.999	1
SMAD2	ST3GAL6	0.999	1
SMAD2	DIP2B	0.999	1
SMAD2	L1TD1	0.999	1
SMAD2	FKBP9	0.999	1
WNT1	PRRG1	0.999	1
WNT1	MPHOSPH10	0.999	1
WNT1	DDX26B	0.999	1
WNT1	BMPR2	0.999	1
WNT1	GPATCH8	0.999	1
FMN2	PRKDC	0.999	1
FMN2	BCL9	0.999	1
FMN2	ALG12	0.999	1
FMN2	C11orf30	0.999	1
FMN2	PCBP1	0.999	1
FMN2	C2orf29	0.999	1
FMN2	SLC26A8	0.999	1
FMN2	FKBP9	0.999	1
FMN2	BCORL1	0.999	1
FMN2	SETD2	0.999	1
GGT1	NF1	0.999	1
GGT1	PTEN	0.999	1
GGT1	8p-Amp	0.999	1
GGT1	15q-Del	0.999	1
GGT1	Amp_8p11.21	0.999	1
GGT1	Del_15q22.33	0.999	1
GGT1	Del_18q21.2	0.999	1
GGT1	Del_18q22.1	0.999	1
STARD3NL	BCL9	0.999	1
STARD3NL	NLRC4	0.999	1
STARD3NL	DIP2B	0.999	1
STARD3NL	BCORL1	0.999	1
STARD3NL	SETD2	0.999	1
STARD3NL	ATM	0.999	1
SELPLG	NF1	0.999	1
SELPLG	TOP2B	0.999	1
OR4D10	BCL9	0.999	1
OR4D10	ERBB2	0.999	1
OR4D10	RBPJ	0.999	1
OR4D10	SMAD4	0.999	1
OR4D10	TOP2B	0.999	1
OR4D10	GPATCH8	0.999	1
OR4D10	GMPS	0.999	1
OR4D10	BIRC3	0.999	1
OR4D10	CREBBP	0.999	1
NF2	FBXW7	0.999	1
NF2	IFT57	0.999	1
NF2	HLA-A	0.999	1
NF2	SLC12A6	0.999	1
NF2	HIST1H1T	0.999	1
MAPK6	NF1	0.999	1
MAPK6	MGA	0.999	1
MAPK6	ST3GAL6	0.999	1
MAPK6	PLEKHF2	0.999	1
MAPK6	PLAGL2	0.999	1
MAPK6	DIP2B	0.999	1
MAPK6	SETD2	0.999	1
RHOA	CDK12	0.999	1
FAM9A	L1TD1	0.999	1
FAM9A	PRPS1	0.999	1
EGR1	ZBTB20	0.999	1
EGR1	ROS1	0.999	1
EGR1	MPHOSPH10	0.999	1
EGR1	FKBP9	0.999	1
EGR1	MAP4K3	0.999	1
PRKDC	DDX26B	0.999	1
PRKDC	MAP4K3	0.999	1
PRKDC	KDM6A	0.999	1
RPTN	P2RY13	0.999	1
RPTN	PTEN	0.999	1
NF1	ATXN3L	0.999	1
NF1	BCL9	0.999	1
NF1	C11orf30	0.999	1
NF1	SLC26A8	0.999	1
NF1	RBBP7	0.999	1
NF1	HLA-A	0.999	1
NF1	FYN	0.999	1
NF1	GPATCH8	0.999	1
NF1	CDK12	0.999	1
NF1	PRPS1	0.999	1
NF1	KDM6A	0.999	1
FBXW7	TPRKB	0.999	1
FBXW7	ALDH1A3	0.999	1
FBXW7	ZNF486	0.999	1
ATXN3L	ST3GAL6	0.999	1
ATXN3L	IQCD	0.999	1
ATXN3L	GRB2	0.999	1
ATXN3L	NEXN	0.999	1
ATXN3L	ZNF486	0.999	1
MGA	MVK	0.999	1
MGA	DIP2B	0.999	1
MGA	PIK3R1	0.999	1
MGA	DDX26B	0.999	1
MGA	FYN	0.999	1
MGA	GPATCH8	0.999	1
MGA	SLC12A6	0.999	1
MGA	CDK12	0.999	1
MGA	BIRC3	0.999	1
MGA	HIST1H1T	0.999	1
TPRKB	PTCH1	0.999	1
TPRKB	SMAD4	0.999	1
MVK	P2RY13	0.999	1
MVK	PIK3R1	0.999	1
MVK	RBBP7	0.999	1
MVK	HLA-A	0.999	1
MVK	ALDH1A3	0.999	1
MVK	LARP4B	0.999	1
MVK	GPATCH8	0.999	1
MVK	GMPS	0.999	1
BCL9	NLRC4	0.999	1
BCL9	C11orf30	0.999	1
BCL9	DDX26B	0.999	1
BCL9	TOP2B	0.999	1
BCL9	BMPR2	0.999	1
BCL9	GPATCH8	0.999	1
BCL9	SLC12A6	0.999	1
BCL9	BIRC3	0.999	1
BCL9	ATM	0.999	1
ZBTB20	ST3GAL6	0.999	1
ZBTB20	IQCD	0.999	1
ZBTB20	FKBP9	0.999	1
ZBTB20	CDK12	0.999	1
ERBB2	RB1	0.999	1
ERBB2	C14orf184	0.999	1
P2RY13	DIP2B	0.999	1
P2RY13	ROS1	0.999	1
P2RY13	DCLK2	0.999	1
P2RY13	BCORL1	0.999	1
P2RY13	GPATCH8	0.999	1
ST3GAL6	RLIM	0.999	1
ST3GAL6	ALDH1A3	0.999	1
ST3GAL6	NEXN	0.999	1
IQCD	RBBP7	0.999	1
IQCD	L1TD1	0.999	1
IQCD	NEXN	0.999	1
IQCD	CREBBP	0.999	1
PLEKHF2	PTCH1	0.999	1
NR1H3	RBBP7	0.999	1
ALPK2	PLAGL2	0.999	1
ALPK2	C11orf30	0.999	1
ALPK2	DIP2B	0.999	1
ALPK2	ALDH1A3	0.999	1
ALPK2	NEXN	0.999	1
ALPK2	BIRC3	0.999	1
ASXL1	DIP2B	0.999	1
ASXL1	TOP2B	0.999	1
ASXL1	FKBP9	0.999	1
ALG12	GPATCH8	0.999	1
PTCH1	DIP2B	0.999	1
PTCH1	RLIM	0.999	1
PTCH1	RBPJ	0.999	1
PTCH1	RBBP7	0.999	1
PTCH1	GPATCH8	0.999	1
GRB2	ROS1	0.999	1
GRB2	BMPR2	0.999	1
GRB2	NEXN	0.999	1
GRB2	CTNNB1	0.999	1
NLRC4	DDX26B	0.999	1
NLRC4	RBPJ	0.999	1
NLRC4	PTEN	0.999	1
NLRC4	HLA-A	0.999	1
NLRC4	FYN	0.999	1
NLRC4	LARP4B	0.999	1
NLRC4	GPATCH8	0.999	1
NLRC4	CDK12	0.999	1
NLRC4	PRPS1	0.999	1
NLRC4	CTNNB1	0.999	1
PLAGL2	SLC26A8	0.999	1
PLAGL2	SETD2	0.999	1
PLAGL2	IDH1	0.999	1
PLAGL2	CTNNB1	0.999	1
C11orf30	SLC26A8	0.999	1
C11orf30	RBBP7	0.999	1
C11orf30	RB1	0.999	1
C11orf30	GMPS	0.999	1
C11orf30	ATM	0.999	1
DIP2B	SLC26A8	0.999	1
DIP2B	RB1	0.999	1
DIP2B	DCLK2	0.999	1
DIP2B	SETD2	0.999	1
PRRG1	RLIM	0.999	1
PRRG1	HLA-A	0.999	1
PRRG1	SETD2	0.999	1
PRRG1	CREBBP	0.999	1
PCBP1	SLC12A6	0.999	1
PIK3R1	PTEN	0.999	1
PIK3R1	GMPS	0.999	1
PIK3R1	PRPS1	0.999	1
IFT57	SLC26A8	0.999	1
IFT57	FKBP9	0.999	1
IFT57	HLA-A	0.999	1
IFT57	BMPR2	0.999	1
IFT57	LARP4B	0.999	1
IFT57	CREBBP	0.999	1
RLIM	SMAD4	0.999	1
RLIM	RB1	0.999	1
RLIM	DCLK2	0.999	1
RLIM	PTEN	0.999	1
RLIM	BMPR2	0.999	1
RLIM	GPATCH8	0.999	1
ROS1	DDX26B	0.999	1
ROS1	SMAD4	0.999	1
ROS1	SETD2	0.999	1
ROS1	BIRC3	0.999	1
MPHOSPH10	SMAD4	0.999	1
MPHOSPH10	RB1	0.999	1
MPHOSPH10	BMPR2	0.999	1
C2orf29	IDH1	0.999	1
DDX26B	TOP2B	0.999	1
DDX26B	CTNNB1	0.999	1
RBPJ	PTEN	0.999	1
RBPJ	GPATCH8	0.999	1
RBPJ	SLC12A6	0.999	1
SLC26A8	MAP4K3	0.999	1
SLC26A8	NEXN	0.999	1
RBBP7	BMPR2	0.999	1
RBBP7	GPATCH8	0.999	1
RBBP7	ZNF486	0.999	1
RB1	BMPR2	0.999	1
RB1	GPATCH8	0.999	1
RB1	NEXN	0.999	1
L1TD1	FKBP9	0.999	1
L1TD1	SETD2	0.999	1
TOP2B	BCORL1	0.999	1
TOP2B	Del_16q23.1	0.999	1
DCLK2	FYN	0.999	1
DCLK2	LARP4B	0.999	1
FKBP9	PTEN	0.999	1
FKBP9	SETD2	0.999	1
FKBP9	ZNF486	0.999	1
PTEN	C14orf184	0.999	1
C14orf184	GMPS	0.999	1
C14orf184	CREBBP	0.999	1
HLA-A	BCORL1	0.999	1
HLA-A	SLC12A6	0.999	1
HLA-A	BIRC3	0.999	1
BMPR2	CDK12	0.999	1
BMPR2	CTNNB1	0.999	1
FYN	LARP4B	0.999	1
FYN	GMPS	0.999	1
LARP4B	SETD2	0.999	1
LARP4B	PTGDR	0.999	1
LARP4B	BIRC3	0.999	1
LARP4B	ATM	0.999	1
LARP4B	ZNF486	0.999	1
LARP4B	KDM6A	0.999	1
BCORL1	PTGDR	0.999	1
BCORL1	GMNN	0.999	1
GPATCH8	SLC12A6	0.999	1
GPATCH8	GMPS	0.999	1
GPATCH8	KDM6A	0.999	1
MAP4K3	CDK12	0.999	1
MAP4K3	ZNF486	0.999	1
MAP4K3	CTNNB1	0.999	1
SLC12A6	CDK12	0.999	1
SLC12A6	GMPS	0.999	1
CDK12	ZNF486	0.999	1
NEXN	ZNF486	0.999	1
GMPS	ATM	0.999	1
PRPS1	KDM6A	0.999	1
CREBBP	CTNNB1	0.999	1
12p-Amp	Amp_8p11.21	0.999	1
12p-Amp	Del_16p13.3	0.999	1
12q-Amp	6p-Amp	0.999	1
12q-Amp	7p-Amp	0.999	1
12q-Amp	Amp_8p11.21	0.999	1
12q-Amp	Amp_8q24.21	0.999	1
13q-Amp	15q-Del	0.999	1
13q-Amp	4p-Del	0.999	1
13q-Amp	5q-Del	0.999	1
13q-Amp	Amp_17q12	0.999	1
13q-Amp	Del_15q15.2	0.999	1
16p-Amp	20q-Amp	0.999	1
16p-Amp	7q-Amp	0.999	1
16p-Amp	Del_8p23.2	0.999	1
16p-Amp	Del_19p13.3	0.999	1
16q-Amp	Amp_12p13.33	0.999	1
16q-Amp	Del_18q12.2	0.999	1
17q-Amp	8q-Amp	0.999	1
17q-Amp	18p-Del	0.999	1
17q-Amp	Amp_8p11.23	0.999	1
17q-Amp	Amp_11p15.5	0.999	1
17q-Amp	Amp_19q12	0.999	1
17q-Amp	Del_2p12	0.999	1
20p-Amp	Amp_11p15.5	0.999	1
2p-Amp	7q-Amp	0.999	1
2p-Amp	Amp_12p13.33	0.999	1
2p-Amp	Amp_13q22.1	0.999	1
2q-Amp	7q-Amp	0.999	1
2q-Amp	Amp_1q31.1	0.999	1
6p-Amp	9p-Amp	0.999	1
6p-Amp	Amp_20p12.1	0.999	1
7p-Amp	18q-Del	0.999	1
7p-Amp	Amp_2q33.1	0.999	1
7p-Amp	Amp_12p13.33	0.999	1
7p-Amp	Amp_17q12	0.999	1
7p-Amp	Del_7q31.1	0.999	1
7q-Amp	17p-Del	0.999	1
7q-Amp	Amp_8p11.21	0.999	1
7q-Amp	Amp_12p13.33	0.999	1
7q-Amp	Amp_15q26.1	0.999	1
7q-Amp	Del_8p22	0.999	1
8q-Amp	18q-Del	0.999	1
8q-Amp	Amp_2q33.1	0.999	1
8q-Amp	Amp_6p21.1	0.999	1
8q-Amp	Amp_17q12	0.999	1
8q-Amp	Del_5q23.3	0.999	1
8q-Amp	Del_18q21.2	0.999	1
14q-Del	21q-Del	0.999	1
15q-Del	21q-Del	0.999	1
15q-Del	Del_1p33	0.999	1
15q-Del	Del_5q21.2	0.999	1
15q-Del	Del_10q21.1	0.999	1
15q-Del	Del_10q23.31	0.999	1
15q-Del	Del_10q25.2	0.999	1
15q-Del	Del_17q24.3	0.999	1
15q-Del	Del_21q21.1	0.999	1
17p-Del	Amp_20p11.21	0.999	1
17p-Del	Del_3p26.3	0.999	1
18p-Del	Amp_17q24.1	0.999	1
18p-Del	Del_17q24.3	0.999	1
1p-Del	Del_4q22.1	0.999	1
1p-Del	Del_6q26	0.999	1
1p-Del	Del_17p12	0.999	1
1p-Del	Del_18p11.31	0.999	1
20p-Del	5q-Del	0.999	1
20p-Del	Del_1p13.2	0.999	1
20p-Del	Del_5q23.3	0.999	1
20p-Del	Del_15q22.33	0.999	1
20p-Del	Del_22q13.32	0.999	1
21q-Del	4p-Del	0.999	1
21q-Del	4q-Del	0.999	1
21q-Del	Del_1p33	0.999	1
21q-Del	Del_5q23.3	0.999	1
21q-Del	Del_8q11.1	0.999	1
22q-Del	5q-Del	0.999	1
22q-Del	Amp_11p15.5	0.999	1
22q-Del	Del_5q12.1	0.999	1
22q-Del	Del_6q26	0.999	1
22q-Del	Del_17q24.3	0.999	1
4p-Del	Amp_13q22.1	0.999	1
4p-Del	Amp_20q12	0.999	1
4p-Del	Del_2p12	0.999	1
4p-Del	Del_10q23.31	0.999	1
4p-Del	Del_14q11.2	0.999	1
4p-Del	Del_19p13.3	0.999	1
4q-Del	Del_2p12	0.999	1
4q-Del	Del_10q23.31	0.999	1
4q-Del	Del_12p13.1	0.999	1
4q-Del	Del_14q11.2	0.999	1
4q-Del	Del_16p13.3	0.999	1
5q-Del	Amp_8q24.21	0.999	1
5q-Del	Del_4q35.1	0.999	1
8p-Del	Amp_8p11.21	0.999	1
8p-Del	Amp_13q12.2	0.999	1
8p-Del	Del_14q11.2	0.999	1
8p-Del	Del_19p13.3	0.999	1
Amp_1q31.1	Amp_6p21.1	0.999	1
Amp_1q31.1	Amp_12p13.33	0.999	1
Amp_2q33.1	Del_12p13.1	0.999	1
Amp_5p12	Amp_16p11.2	0.999	1
Amp_5p12	Amp_20q11.21	0.999	1
Amp_5p12	Del_2q22.1	0.999	1
Amp_5p12	Del_5q12.1	0.999	1
Amp_8p11.23	Amp_12p13.33	0.999	1
Amp_8p11.21	Amp_13q12.2	0.999	1
Amp_8p11.21	Amp_20p11.21	0.999	1
Amp_8p11.21	Del_5q23.3	0.999	1
Amp_8p11.21	Del_18q12.2	0.999	1
Amp_8q24.21	Amp_13q12.2	0.999	1
Amp_8q24.21	Amp_17q12	0.999	1
Amp_8q24.21	Amp_17q24.1	0.999	1
Amp_11p15.5	Amp_20q12	0.999	1
Amp_11p15.5	Amp_20q13.12	0.999	1
Amp_13q12.13	Amp_15q26.1	0.999	1
Amp_13q12.13	Del_1p13.2	0.999	1
Amp_13q12.13	Del_15q21.1	0.999	1
Amp_13q12.13	Del_22q13.32	0.999	1
Amp_13q12.2	Amp_15q26.1	0.999	1
Amp_13q22.1	Amp_15q26.1	0.999	1
Amp_13q22.1	Del_1p36.11	0.999	1
Amp_13q22.1	Del_1p13.2	0.999	1
Amp_13q22.1	Del_4q22.1	0.999	1
Amp_16p11.2	Amp_20q12	0.999	1
Amp_16p11.2	Del_8p23.2	0.999	1
Amp_16p11.2	Del_19p13.3	0.999	1
Amp_17q12	Del_2p12	0.999	1
Amp_17q24.1	Amp_20q11.21	0.999	1
Amp_19q12	Amp_20p11.21	0.999	1
Amp_19q12	Amp_20q13.12	0.999	1
Amp_20p12.1	Del_18q12.2	0.999	1
Amp_20p12.1	Del_18q21.2	0.999	1
Amp_20p12.1	Del_18q22.1	0.999	1
Amp_20q11.21	Del_4p16.1	0.999	1
Amp_20q12	Del_4p16.1	0.999	1
Amp_20q12	Del_4q35.1	0.999	1
Amp_20q13.12	Del_4q35.1	0.999	1
Del_1p36.11	Del_10q23.31	0.999	1
Del_1p36.11	Del_12p13.1	0.999	1
Del_1p33	Del_3p26.3	0.999	1
Del_1p33	Del_4q35.1	0.999	1
Del_1p33	Del_10q21.1	0.999	1
Del_1p33	Del_15q15.2	0.999	1
Del_1p33	Del_15q22.33	0.999	1
Del_1p33	Del_18p11.31	0.999	1
Del_1p33	Del_21q11.2	0.999	1
Del_1p13.2	Del_14q11.2	0.999	1
Del_1p13.2	Del_15q15.2	0.999	1
Del_1p13.2	Del_15q21.1	0.999	1
Del_2p12	Del_15q11.2	0.999	1
Del_2p12	Del_15q15.2	0.999	1
Del_2p12	Del_15q21.1	0.999	1
Del_2q22.1	Del_6q26	0.999	1
Del_3p26.3	Del_4q22.1	0.999	1
Del_3p26.3	Del_17p12	0.999	1
Del_3p26.3	Del_18q21.2	0.999	1
Del_3p26.3	Del_21q11.2	0.999	1
Del_3p14.2	Del_16p13.3	0.999	1
Del_4p16.1	Del_5q21.2	0.999	1
Del_4p16.1	Del_5q23.3	0.999	1
Del_4p16.1	Del_14q11.2	0.999	1
Del_4p16.1	Del_17q24.3	0.999	1
Del_4q22.1	Del_17q24.3	0.999	1
Del_4q35.1	Del_6q26	0.999	1
Del_4q35.1	Del_12p13.1	0.999	1
Del_4q35.1	Del_15q15.2	0.999	1
Del_4q35.1	Del_15q21.1	0.999	1
Del_4q35.1	Del_19p13.3	0.999	1
Del_5q21.2	Del_8p23.2	0.999	1
Del_5q21.2	Del_8p22	0.999	1
Del_5q21.2	Del_10q21.1	0.999	1
Del_5q21.2	Del_18p11.31	0.999	1
Del_5q21.2	Del_22q13.32	0.999	1
Del_5q22.2	Del_15q15.2	0.999	1
Del_5q23.3	Del_15q22.33	0.999	1
Del_5q23.3	Del_21q21.1	0.999	1
Del_5q23.3	Del_22q13.32	0.999	1
Del_6q26	Del_8q11.1	0.999	1
Del_6q26	Del_16p13.3	0.999	1
Del_6q26	Del_19p13.3	0.999	1
Del_6q26	Del_21q11.2	0.999	1
Del_8p23.2	Del_10q23.31	0.999	1
Del_8p23.2	Del_14q11.2	0.999	1
Del_8p22	Del_16p13.3	0.999	1
Del_8q11.1	Del_19p13.3	0.999	1
Del_10q21.1	Del_15q11.2	0.999	1
Del_10q21.1	Del_16q23.1	0.999	1
Del_10q21.1	Del_17p12	0.999	1
Del_10q23.31	Del_17q24.3	0.999	1
Del_10q25.2	Del_17p12	0.999	1
Del_10q25.2	Del_17q24.3	0.999	1
Del_15q11.2	Del_21q11.2	0.999	1
Del_15q21.1	Del_21q21.1	0.999	1
Del_15q22.33	Del_17q24.3	0.999	1
Del_17q24.3	Del_18p11.31	0.999	1
APC	GGT1	1	1
APC	STARD3NL	1	1
APC	OR4D10	1	1
APC	TPRKB	1	1
APC	PLEKHF2	1	1
APC	ALG12	1	1
APC	PTCH1	1	1
APC	PLAGL2	1	1
APC	PCBP1	1	1
APC	RSPH3	1	1
APC	VCX2	1	1
APC	PTEN	1	1
APC	C14orf184	1	1
APC	PRPS1	1	1
APC	GMNN	1	1
APC	Amp_13q12.2	1	1
ARID1A	RNF43	1	1
ARID1A	SOX9	1	1
ARID1A	CDH1	1	1
ARID1A	BCOR	1	1
ARID1A	STARD3NL	1	1
ARID1A	NF2	1	1
ARID1A	FAM9A	1	1
ARID1A	PRKDC	1	1
ARID1A	RPTN	1	1
ARID1A	NF1	1	1
ARID1A	MGA	1	1
ARID1A	MVK	1	1
ARID1A	BCL9	1	1
ARID1A	ZBTB20	1	1
ARID1A	ST3GAL6	1	1
ARID1A	ALPK2	1	1
ARID1A	NLRC4	1	1
ARID1A	PLAGL2	1	1
ARID1A	C11orf30	1	1
ARID1A	PIK3R1	1	1
ARID1A	ROS1	1	1
ARID1A	C2orf29	1	1
ARID1A	DDX26B	1	1
ARID1A	SLC26A8	1	1
ARID1A	RB1	1	1
ARID1A	L1TD1	1	1
ARID1A	PTEN	1	1
ARID1A	BMPR2	1	1
ARID1A	LARP4B	1	1
ARID1A	BCORL1	1	1
ARID1A	SETD2	1	1
ARID1A	SLC12A6	1	1
ARID1A	CDK12	1	1
ARID1A	ATM	1	1
ARID1A	CTNNB1	1	1
CRIPAK	SMAD4	1	1
RNF43	ZFP36L2	1	1
RNF43	MLH1	1	1
RNF43	BCOR	1	1
RNF43	WNT1	1	1
RNF43	FMN2	1	1
RNF43	FAM9A	1	1
RNF43	EGR1	1	1
RNF43	PRKDC	1	1
RNF43	MGA	1	1
RNF43	MVK	1	1
RNF43	BCL9	1	1
RNF43	ZBTB20	1	1
RNF43	ST3GAL6	1	1
RNF43	NR1H3	1	1
RNF43	ALPK2	1	1
RNF43	PTCH1	1	1
RNF43	NLRC4	1	1
RNF43	PLAGL2	1	1
RNF43	PRRG1	1	1
RNF43	ROS1	1	1
RNF43	MPHOSPH10	1	1
RNF43	DDX26B	1	1
RNF43	SLC26A8	1	1
RNF43	RBBP7	1	1
RNF43	RB1	1	1
RNF43	L1TD1	1	1
RNF43	TOP2B	1	1
RNF43	FKBP9	1	1
RNF43	PTEN	1	1
RNF43	HLA-A	1	1
RNF43	BMPR2	1	1
RNF43	FYN	1	1
RNF43	ALDH1A3	1	1
RNF43	LARP4B	1	1
RNF43	BCORL1	1	1
RNF43	GPATCH8	1	1
RNF43	MAP4K3	1	1
RNF43	SETD2	1	1
RNF43	SLC12A6	1	1
RNF43	CDK12	1	1
RNF43	GMPS	1	1
RNF43	ATM	1	1
RNF43	IDH1	1	1
RNF43	ZNF486	1	1
RNF43	CREBBP	1	1
TP53	PLAGL2	1	1
TP53	RB1	1	1
TP53	C14orf184	1	1
TP53	GMNN	1	1
TP53	20q-Amp	1	1
TP53	7p-Amp	1	1
TP53	17p-Del	1	1
TP53	18p-Del	1	1
TP53	18q-Del	1	1
TP53	8p-Del	1	1
TP53	Amp_8q24.21	1	1
TP53	Amp_13q12.13	1	1
TP53	Amp_13q12.2	1	1
TP53	Amp_13q22.1	1	1
TP53	Amp_20p11.21	1	1
TP53	Amp_20q11.21	1	1
TP53	Amp_20q12	1	1
TP53	Amp_20q13.12	1	1
TP53	Del_8p23.2	1	1
TP53	Del_8p22	1	1
TP53	Del_17p12	1	1
TP53	Del_18p11.31	1	1
TP53	Del_18q12.2	1	1
TP53	Del_18q21.2	1	1
TP53	Del_18q22.1	1	1
FAM123B	SOX9	1	1
FAM123B	ZBTB20	1	1
FAM123B	ALPK2	1	1
FAM123B	PIK3R1	1	1
FAM123B	ROS1	1	1
FAM123B	BMPR2	1	1
FAM123B	SETD2	1	1
FAM123B	SLC12A6	1	1
FAM123B	GMPS	1	1
SOX9	FBXW7	1	1
SOX9	PCBP1	1	1
ZFP36L2	BCOR	1	1
ZFP36L2	FAM9A	1	1
ZFP36L2	ZBTB20	1	1
ZFP36L2	ALPK2	1	1
B2M	ACVR1B	1	1
B2M	FAM9A	1	1
B2M	EGR1	1	1
B2M	PRKDC	1	1
B2M	ZBTB20	1	1
B2M	ASXL1	1	1
B2M	RSPH3	1	1
B2M	DDX26B	1	1
B2M	SLC26A8	1	1
B2M	L1TD1	1	1
B2M	FKBP9	1	1
B2M	MAP4K3	1	1
B2M	CDK12	1	1
B2M	BIRC3	1	1
B2M	ATM	1	1
B2M	CREBBP	1	1
B2M	GMNN	1	1
B2M	CTNNB1	1	1
TXNDC2	P2RY13	1	1
TXNDC2	C11orf30	1	1
TXNDC2	GPATCH8	1	1
ACVR1B	NR1H3	1	1
CDH1	MLH1	1	1
CDH1	BCOR	1	1
CDH1	FMN2	1	1
CDH1	STARD3NL	1	1
CDH1	NF2	1	1
CDH1	MAPK6	1	1
CDH1	RHOA	1	1
CDH1	PRKDC	1	1
CDH1	RPTN	1	1
CDH1	NF1	1	1
CDH1	FBXW7	1	1
CDH1	ATXN3L	1	1
CDH1	P2RY13	1	1
CDH1	ALPK2	1	1
CDH1	PTCH1	1	1
CDH1	NLRC4	1	1
CDH1	PLAGL2	1	1
CDH1	ROS1	1	1
CDH1	C2orf29	1	1
CDH1	DDX26B	1	1
CDH1	SMAD4	1	1
CDH1	RB1	1	1
CDH1	PTEN	1	1
CDH1	BMPR2	1	1
CDH1	SETD2	1	1
CDH1	ATM	1	1
CDH1	CTNNB1	1	1
MLH1	WNT1	1	1
MLH1	NF2	1	1
MLH1	PRKDC	1	1
MLH1	NF1	1	1
MLH1	MVK	1	1
MLH1	PTCH1	1	1
MLH1	NLRC4	1	1
MLH1	SMAD4	1	1
MLH1	RB1	1	1
MLH1	PTEN	1	1
MLH1	LARP4B	1	1
MLH1	ATM	1	1
MLH1	CREBBP	1	1
MLH1	CTNNB1	1	1
BCOR	FAM9A	1	1
BCOR	MGA	1	1
BCOR	ZBTB20	1	1
BCOR	NLRC4	1	1
BCOR	DIP2B	1	1
BCOR	ROS1	1	1
BCOR	RB1	1	1
BCOR	BMPR2	1	1
BCOR	CDK12	1	1
WNT1	FMN2	1	1
WNT1	EGR1	1	1
WNT1	MVK	1	1
WNT1	ST3GAL6	1	1
WNT1	ALG12	1	1
WNT1	PLAGL2	1	1
WNT1	ROS1	1	1
WNT1	RB1	1	1
WNT1	TOP2B	1	1
WNT1	HLA-A	1	1
WNT1	LARP4B	1	1
WNT1	PRPS1	1	1
WNT1	ATM	1	1
WNT1	IDH1	1	1
FMN2	RPTN	1	1
FMN2	NF1	1	1
FMN2	MVK	1	1
FMN2	PTCH1	1	1
FMN2	PLAGL2	1	1
FMN2	DDX26B	1	1
FMN2	RB1	1	1
FMN2	TOP2B	1	1
FMN2	PTEN	1	1
FMN2	MAP4K3	1	1
FMN2	NEXN	1	1
FMN2	ATM	1	1
FMN2	CTNNB1	1	1
FMN2	KDM6A	1	1
GGT1	13q-Amp	1	1
GGT1	20q-Amp	1	1
GGT1	8q-Amp	1	1
GGT1	18q-Del	1	1
GGT1	Amp_13q12.13	1	1
GGT1	Amp_13q12.2	1	1
GGT1	Amp_13q22.1	1	1
GGT1	Amp_20q11.21	1	1
GGT1	Amp_20q12	1	1
GGT1	Amp_20q13.12	1	1
GGT1	Del_18q12.2	1	1
STARD3NL	NF2	1	1
STARD3NL	RHOA	1	1
STARD3NL	NF1	1	1
STARD3NL	MGA	1	1
STARD3NL	ALPK2	1	1
STARD3NL	PTCH1	1	1
STARD3NL	L1TD1	1	1
STARD3NL	PTEN	1	1
STARD3NL	SLC12A6	1	1
STARD3NL	CTNNB1	1	1
SELPLG	OR4D10	1	1
SELPLG	PTCH1	1	1
SELPLG	GRB2	1	1
SELPLG	PIK3R1	1	1
SELPLG	RLIM	1	1
SELPLG	DCLK2	1	1
SELPLG	PTEN	1	1
SELPLG	PTGDR	1	1
SELPLG	ATM	1	1
SELPLG	GMNN	1	1
SELPLG	CTNNB1	1	1
OR4D10	NF2	1	1
OR4D10	MAPK6	1	1
OR4D10	PRKDC	1	1
OR4D10	ST3GAL6	1	1
OR4D10	ASXL1	1	1
OR4D10	PTCH1	1	1
OR4D10	C11orf30	1	1
OR4D10	PIK3R1	1	1
OR4D10	ROS1	1	1
OR4D10	RBBP7	1	1
OR4D10	FKBP9	1	1
OR4D10	HLA-A	1	1
OR4D10	LARP4B	1	1
OR4D10	CTNNB1	1	1
NF2	MAPK6	1	1
NF2	PRKDC	1	1
NF2	RPTN	1	1
NF2	NF1	1	1
NF2	ZBTB20	1	1
NF2	ALPK2	1	1
NF2	PTCH1	1	1
NF2	NLRC4	1	1
NF2	PLAGL2	1	1
NF2	C11orf30	1	1
NF2	DIP2B	1	1
NF2	PRRG1	1	1
NF2	PIK3R1	1	1
NF2	ROS1	1	1
NF2	DDX26B	1	1
NF2	SMAD4	1	1
NF2	RBBP7	1	1
NF2	RB1	1	1
NF2	TOP2B	1	1
NF2	PTEN	1	1
NF2	BMPR2	1	1
NF2	LARP4B	1	1
NF2	GPATCH8	1	1
NF2	SETD2	1	1
NF2	ATM	1	1
NF2	CREBBP	1	1
NF2	CTNNB1	1	1
MAPK6	PRKDC	1	1
MAPK6	RPTN	1	1
MAPK6	FBXW7	1	1
MAPK6	TPRKB	1	1
MAPK6	ALPK2	1	1
MAPK6	GRB2	1	1
MAPK6	NLRC4	1	1
MAPK6	C11orf30	1	1
MAPK6	PRRG1	1	1
MAPK6	RLIM	1	1
MAPK6	ROS1	1	1
MAPK6	SLC26A8	1	1
MAPK6	RB1	1	1
MAPK6	TOP2B	1	1
MAPK6	BMPR2	1	1
MAPK6	ALDH1A3	1	1
MAPK6	LARP4B	1	1
MAPK6	GPATCH8	1	1
MAPK6	NEXN	1	1
MAPK6	PTGDR	1	1
MAPK6	CREBBP	1	1
MAPK6	CTNNB1	1	1
FAM9A	EGR1	1	1
FAM9A	PRKDC	1	1
FAM9A	BCL9	1	1
FAM9A	ZBTB20	1	1
FAM9A	ALPK2	1	1
FAM9A	DIP2B	1	1
FAM9A	ROS1	1	1
FAM9A	MPHOSPH10	1	1
FAM9A	DDX26B	1	1
FAM9A	SLC26A8	1	1
FAM9A	FKBP9	1	1
FAM9A	ALDH1A3	1	1
FAM9A	LARP4B	1	1
FAM9A	SLC12A6	1	1
FAM9A	CDK12	1	1
FAM9A	ATM	1	1
EGR1	PRKDC	1	1
EGR1	ALPK2	1	1
EGR1	PLAGL2	1	1
EGR1	IFT57	1	1
EGR1	SLC26A8	1	1
EGR1	TOP2B	1	1
EGR1	LARP4B	1	1
EGR1	SLC12A6	1	1
EGR1	CDK12	1	1
EGR1	BIRC3	1	1
EGR1	CREBBP	1	1
EGR1	CTNNB1	1	1
PRKDC	NF1	1	1
PRKDC	FBXW7	1	1
PRKDC	CHUK	1	1
PRKDC	MGA	1	1
PRKDC	BCL9	1	1
PRKDC	ZBTB20	1	1
PRKDC	ALPK2	1	1
PRKDC	ASXL1	1	1
PRKDC	PTCH1	1	1
PRKDC	NLRC4	1	1
PRKDC	C11orf30	1	1
PRKDC	DIP2B	1	1
PRKDC	PIK3R1	1	1
PRKDC	RLIM	1	1
PRKDC	ROS1	1	1
PRKDC	MPHOSPH10	1	1
PRKDC	RBPJ	1	1
PRKDC	SLC26A8	1	1
PRKDC	RB1	1	1
PRKDC	L1TD1	1	1
PRKDC	TOP2B	1	1
PRKDC	FKBP9	1	1
PRKDC	PTEN	1	1
PRKDC	HLA-A	1	1
PRKDC	BMPR2	1	1
PRKDC	FYN	1	1
PRKDC	LARP4B	1	1
PRKDC	BCORL1	1	1
PRKDC	GPATCH8	1	1
PRKDC	SETD2	1	1
PRKDC	SLC12A6	1	1
PRKDC	CDK12	1	1
PRKDC	BIRC3	1	1
PRKDC	ATM	1	1
PRKDC	CREBBP	1	1
PRKDC	CTNNB1	1	1
RPTN	SMAD4	1	1
RPTN	MAP4K3	1	1
RPTN	CTNNB1	1	1
NF1	CHUK	1	1
NF1	MGA	1	1
NF1	TPRKB	1	1
NF1	ALPK2	1	1
NF1	PTCH1	1	1
NF1	GRB2	1	1
NF1	NLRC4	1	1
NF1	PLAGL2	1	1
NF1	DIP2B	1	1
NF1	PRRG1	1	1
NF1	PIK3R1	1	1
NF1	RSPH3	1	1
NF1	ROS1	1	1
NF1	C2orf29	1	1
NF1	DDX26B	1	1
NF1	SMAD4	1	1
NF1	RB1	1	1
NF1	TOP2B	1	1
NF1	FKBP9	1	1
NF1	PTEN	1	1
NF1	C14orf184	1	1
NF1	BMPR2	1	1
NF1	SETD2	1	1
NF1	SLC12A6	1	1
NF1	NEXN	1	1
NF1	ATM	1	1
NF1	CREBBP	1	1
NF1	CTNNB1	1	1
FBXW7	PTCH1	1	1
FBXW7	PTEN	1	1
FBXW7	BMPR2	1	1
FBXW7	LARP4B	1	1
FBXW7	ATM	1	1
CHUK	ASXL1	1	1
CHUK	ROS1	1	1
CHUK	SMAD4	1	1
CHUK	SLC26A8	1	1
CHUK	RB1	1	1
CHUK	TOP2B	1	1
CHUK	HLA-A	1	1
CHUK	ALDH1A3	1	1
CHUK	ATM	1	1
CHUK	CREBBP	1	1
ATXN3L	MGA	1	1
ATXN3L	NLRC4	1	1
ATXN3L	RBBP7	1	1
ATXN3L	FKBP9	1	1
MGA	TPRKB	1	1
MGA	BCL9	1	1
MGA	ZBTB20	1	1
MGA	ST3GAL6	1	1
MGA	IQCD	1	1
MGA	ALPK2	1	1
MGA	PTCH1	1	1
MGA	GRB2	1	1
MGA	NLRC4	1	1
MGA	C11orf30	1	1
MGA	ROS1	1	1
MGA	MPHOSPH10	1	1
MGA	SLC26A8	1	1
MGA	RB1	1	1
MGA	L1TD1	1	1
MGA	TOP2B	1	1
MGA	DCLK2	1	1
MGA	FKBP9	1	1
MGA	BMPR2	1	1
MGA	LARP4B	1	1
MGA	BCORL1	1	1
MGA	SETD2	1	1
MGA	NEXN	1	1
MGA	PTGDR	1	1
MGA	ATM	1	1
MGA	CREBBP	1	1
TPRKB	RB1	1	1
TPRKB	FKBP9	1	1
TPRKB	PTEN	1	1
TPRKB	ATM	1	1
TPRKB	KDM6A	1	1
MVK	ZBTB20	1	1
MVK	ALPK2	1	1
MVK	PTCH1	1	1
MVK	NLRC4	1	1
MVK	PRRG1	1	1
MVK	IFT57	1	1
MVK	ROS1	1	1
MVK	DDX26B	1	1
MVK	RBPJ	1	1
MVK	SLC26A8	1	1
MVK	BMPR2	1	1
MVK	BCORL1	1	1
MVK	MAP4K3	1	1
MVK	SLC12A6	1	1
MVK	CREBBP	1	1
BCL9	ZBTB20	1	1
BCL9	ST3GAL6	1	1
BCL9	ALPK2	1	1
BCL9	PTCH1	1	1
BCL9	GRB2	1	1
BCL9	RLIM	1	1
BCL9	ROS1	1	1
BCL9	L1TD1	1	1
BCL9	FKBP9	1	1
BCL9	HLA-A	1	1
BCL9	ALDH1A3	1	1
BCL9	MAP4K3	1	1
BCL9	NEXN	1	1
ZBTB20	ALPK2	1	1
ZBTB20	GRB2	1	1
ZBTB20	NLRC4	1	1
ZBTB20	DIP2B	1	1
ZBTB20	PRRG1	1	1
ZBTB20	ROS1	1	1
ZBTB20	DDX26B	1	1
ZBTB20	BMPR2	1	1
ZBTB20	ALDH1A3	1	1
ZBTB20	LARP4B	1	1
ZBTB20	BCORL1	1	1
ZBTB20	MAP4K3	1	1
ZBTB20	SETD2	1	1
ZBTB20	SLC12A6	1	1
ZBTB20	PTGDR	1	1
ZBTB20	ATM	1	1
ZBTB20	HIST1H1T	1	1
ZBTB20	ZNF486	1	1
ZBTB20	CTNNB1	1	1
ERBB2	PTEN	1	1
P2RY13	ALPK2	1	1
P2RY13	C11orf30	1	1
P2RY13	DDX26B	1	1
P2RY13	RB1	1	1
P2RY13	FKBP9	1	1
P2RY13	HLA-A	1	1
P2RY13	ALDH1A3	1	1
P2RY13	LARP4B	1	1
P2RY13	MAP4K3	1	1
P2RY13	GMPS	1	1
P2RY13	ATM	1	1
ST3GAL6	ALPK2	1	1
ST3GAL6	NLRC4	1	1
ST3GAL6	C11orf30	1	1
ST3GAL6	PRRG1	1	1
ST3GAL6	ROS1	1	1
ST3GAL6	RBBP7	1	1
ST3GAL6	L1TD1	1	1
ST3GAL6	DCLK2	1	1
ST3GAL6	BMPR2	1	1
ST3GAL6	LARP4B	1	1
ST3GAL6	GPATCH8	1	1
ST3GAL6	MAP4K3	1	1
IQCD	ALPK2	1	1
IQCD	NLRC4	1	1
IQCD	FYN	1	1
IQCD	SETD2	1	1
PLEKHF2	PLAGL2	1	1
PLEKHF2	SMAD4	1	1
PLEKHF2	HLA-A	1	1
PLEKHF2	CTNNB1	1	1
NR1H3	DDX26B	1	1
NR1H3	CDK12	1	1
ALPK2	PTCH1	1	1
ALPK2	NLRC4	1	1
ALPK2	PRRG1	1	1
ALPK2	PIK3R1	1	1
ALPK2	IFT57	1	1
ALPK2	ROS1	1	1
ALPK2	MPHOSPH10	1	1
ALPK2	C2orf29	1	1
ALPK2	RBPJ	1	1
ALPK2	SLC26A8	1	1
ALPK2	RBBP7	1	1
ALPK2	RB1	1	1
ALPK2	L1TD1	1	1
ALPK2	FKBP9	1	1
ALPK2	PTEN	1	1
ALPK2	HLA-A	1	1
ALPK2	BMPR2	1	1
ALPK2	FYN	1	1
ALPK2	LARP4B	1	1
ALPK2	BCORL1	1	1
ALPK2	GPATCH8	1	1
ALPK2	MAP4K3	1	1
ALPK2	SETD2	1	1
ALPK2	SLC12A6	1	1
ALPK2	CDK12	1	1
ALPK2	GMPS	1	1
ALPK2	ATM	1	1
ALPK2	CREBBP	1	1
ALPK2	CTNNB1	1	1
ASXL1	PTCH1	1	1
ASXL1	ROS1	1	1
ASXL1	SLC26A8	1	1
ASXL1	RBBP7	1	1
ASXL1	RB1	1	1
ASXL1	PTEN	1	1
ASXL1	SETD2	1	1
ASXL1	SLC12A6	1	1
ASXL1	CDK12	1	1
ASXL1	CREBBP	1	1
ASXL1	CTNNB1	1	1
ALG12	PLAGL2	1	1
ALG12	LARP4B	1	1
ALG12	CDK12	1	1
ALG12	PRPS1	1	1
PTCH1	NLRC4	1	1
PTCH1	PLAGL2	1	1
PTCH1	PIK3R1	1	1
PTCH1	ROS1	1	1
PTCH1	MPHOSPH10	1	1
PTCH1	SMAD4	1	1
PTCH1	RB1	1	1
PTCH1	TOP2B	1	1
PTCH1	FKBP9	1	1
PTCH1	PTEN	1	1
PTCH1	HLA-A	1	1
PTCH1	BMPR2	1	1
PTCH1	ALDH1A3	1	1
PTCH1	BCORL1	1	1
PTCH1	SETD2	1	1
PTCH1	SLC12A6	1	1
PTCH1	CDK12	1	1
PTCH1	PRPS1	1	1
PTCH1	ATM	1	1
PTCH1	ZNF486	1	1
PTCH1	CREBBP	1	1
PTCH1	CTNNB1	1	1
PTCH1	KDM6A	1	1
GRB2	IFT57	1	1
GRB2	PTGDR	1	1
NLRC4	PIK3R1	1	1
NLRC4	ROS1	1	1
NLRC4	SLC26A8	1	1
NLRC4	RBBP7	1	1
NLRC4	RB1	1	1
NLRC4	L1TD1	1	1
NLRC4	FKBP9	1	1
NLRC4	BCORL1	1	1
NLRC4	SLC12A6	1	1
NLRC4	GMPS	1	1
NLRC4	ATM	1	1
NLRC4	CREBBP	1	1
PLAGL2	PRRG1	1	1
PLAGL2	IFT57	1	1
PLAGL2	MPHOSPH10	1	1
PLAGL2	DDX26B	1	1
PLAGL2	RB1	1	1
PLAGL2	TOP2B	1	1
PLAGL2	HLA-A	1	1
PLAGL2	BMPR2	1	1
PLAGL2	LARP4B	1	1
PLAGL2	BCORL1	1	1
PLAGL2	GPATCH8	1	1
PLAGL2	SLC12A6	1	1
PLAGL2	CDK12	1	1
PLAGL2	PRPS1	1	1
PLAGL2	ATM	1	1
PLAGL2	CREBBP	1	1
C11orf30	DIP2B	1	1
C11orf30	PIK3R1	1	1
C11orf30	ROS1	1	1
C11orf30	MPHOSPH10	1	1
C11orf30	DDX26B	1	1
C11orf30	TOP2B	1	1
C11orf30	DCLK2	1	1
C11orf30	FKBP9	1	1
C11orf30	HLA-A	1	1
C11orf30	BMPR2	1	1
C11orf30	LARP4B	1	1
C11orf30	GPATCH8	1	1
C11orf30	SETD2	1	1
C11orf30	ZNF486	1	1
C11orf30	CREBBP	1	1
DIP2B	PIK3R1	1	1
DIP2B	IFT57	1	1
DIP2B	ROS1	1	1
DIP2B	RBBP7	1	1
DIP2B	L1TD1	1	1
DIP2B	TOP2B	1	1
DIP2B	FKBP9	1	1
DIP2B	BMPR2	1	1
DIP2B	FYN	1	1
DIP2B	SLC12A6	1	1
DIP2B	CDK12	1	1
DIP2B	BIRC3	1	1
DIP2B	ATM	1	1
DIP2B	CREBBP	1	1
DIP2B	CTNNB1	1	1
PRRG1	DDX26B	1	1
PRRG1	RBPJ	1	1
PRRG1	RBBP7	1	1
PRRG1	RB1	1	1
PRRG1	TOP2B	1	1
PRRG1	PTEN	1	1
PRRG1	BMPR2	1	1
PRRG1	LARP4B	1	1
PRRG1	GPATCH8	1	1
PRRG1	SLC12A6	1	1
PRRG1	NEXN	1	1
PRRG1	ATM	1	1
PIK3R1	MPHOSPH10	1	1
PIK3R1	DDX26B	1	1
PIK3R1	SLC26A8	1	1
PIK3R1	RBBP7	1	1
PIK3R1	RB1	1	1
PIK3R1	BCORL1	1	1
PIK3R1	CDK12	1	1
PIK3R1	ATM	1	1
PIK3R1	CREBBP	1	1
PIK3R1	CTNNB1	1	1
IFT57	FYN	1	1
IFT57	BCORL1	1	1
IFT57	SLC12A6	1	1
RSPH3	C2orf29	1	1
RSPH3	FKBP9	1	1
RSPH3	BCORL1	1	1
RSPH3	CREBBP	1	1
RSPH3	2p-Amp	1	1
RLIM	NEXN	1	1
RLIM	CTNNB1	1	1
ROS1	MPHOSPH10	1	1
ROS1	SLC26A8	1	1
ROS1	RBBP7	1	1
ROS1	RB1	1	1
ROS1	L1TD1	1	1
ROS1	TOP2B	1	1
ROS1	DCLK2	1	1
ROS1	PTEN	1	1
ROS1	HLA-A	1	1
ROS1	BMPR2	1	1
ROS1	ALDH1A3	1	1
ROS1	LARP4B	1	1
ROS1	BCORL1	1	1
ROS1	GPATCH8	1	1
ROS1	SLC12A6	1	1
ROS1	GMPS	1	1
ROS1	PTGDR	1	1
ROS1	ATM	1	1
ROS1	CREBBP	1	1
ROS1	CTNNB1	1	1
MPHOSPH10	HLA-A	1	1
MPHOSPH10	GPATCH8	1	1
MPHOSPH10	SETD2	1	1
C2orf29	PTEN	1	1
C2orf29	ATM	1	1
C2orf29	CREBBP	1	1
C2orf29	KDM6A	1	1
DDX26B	RB1	1	1
DDX26B	HLA-A	1	1
DDX26B	BMPR2	1	1
DDX26B	BCORL1	1	1
DDX26B	GPATCH8	1	1
DDX26B	SLC12A6	1	1
DDX26B	CDK12	1	1
DDX26B	ATM	1	1
RBPJ	BMPR2	1	1
RBPJ	SETD2	1	1
SMAD4	RB1	1	1
SMAD4	PTEN	1	1
SMAD4	ATM	1	1
SMAD4	CTNNB1	1	1
SLC26A8	L1TD1	1	1
SLC26A8	TOP2B	1	1
SLC26A8	FKBP9	1	1
SLC26A8	HLA-A	1	1
SLC26A8	BMPR2	1	1
SLC26A8	LARP4B	1	1
SLC26A8	BCORL1	1	1
SLC26A8	SETD2	1	1
SLC26A8	CDK12	1	1
SLC26A8	GMPS	1	1
SLC26A8	ATM	1	1
SLC26A8	CREBBP	1	1
SLC26A8	KDM6A	1	1
RBBP7	L1TD1	1	1
RBBP7	TOP2B	1	1
RBBP7	FKBP9	1	1
RBBP7	FYN	1	1
RBBP7	SETD2	1	1
RBBP7	SLC12A6	1	1
RBBP7	NEXN	1	1
RBBP7	CREBBP	1	1
RBBP7	GMNN	1	1
RB1	TOP2B	1	1
RB1	FKBP9	1	1
RB1	PTEN	1	1
RB1	FYN	1	1
RB1	LARP4B	1	1
RB1	BCORL1	1	1
RB1	SETD2	1	1
RB1	SLC12A6	1	1
RB1	PRPS1	1	1
RB1	PTGDR	1	1
RB1	ATM	1	1
RB1	CREBBP	1	1
RB1	CTNNB1	1	1
RB1	KDM6A	1	1
L1TD1	BMPR2	1	1
L1TD1	FYN	1	1
L1TD1	ALDH1A3	1	1
L1TD1	LARP4B	1	1
L1TD1	MAP4K3	1	1
L1TD1	CDK12	1	1
L1TD1	NEXN	1	1
L1TD1	GMPS	1	1
L1TD1	BIRC3	1	1
TOP2B	FKBP9	1	1
TOP2B	PTEN	1	1
TOP2B	HLA-A	1	1
TOP2B	BMPR2	1	1
TOP2B	LARP4B	1	1
TOP2B	SLC12A6	1	1
TOP2B	CDK12	1	1
TOP2B	ATM	1	1
TOP2B	ZNF486	1	1
TOP2B	CREBBP	1	1
TOP2B	CTNNB1	1	1
DCLK2	BIRC3	1	1
DCLK2	ATM	1	1
FKBP9	HLA-A	1	1
FKBP9	BMPR2	1	1
FKBP9	LARP4B	1	1
FKBP9	BCORL1	1	1
FKBP9	MAP4K3	1	1
FKBP9	SLC12A6	1	1
FKBP9	CDK12	1	1
FKBP9	GMPS	1	1
FKBP9	ATM	1	1
FKBP9	CREBBP	1	1
PTEN	BMPR2	1	1
PTEN	SLC12A6	1	1
PTEN	CDK12	1	1
PTEN	ATM	1	1
PTEN	CTNNB1	1	1
PTEN	KDM6A	1	1
HLA-A	BMPR2	1	1
HLA-A	LARP4B	1	1
HLA-A	GPATCH8	1	1
HLA-A	SETD2	1	1
HLA-A	CDK12	1	1
HLA-A	ATM	1	1
HLA-A	CREBBP	1	1
BMPR2	ALDH1A3	1	1
BMPR2	LARP4B	1	1
BMPR2	BCORL1	1	1
BMPR2	GPATCH8	1	1
BMPR2	MAP4K3	1	1
BMPR2	SETD2	1	1
BMPR2	SLC12A6	1	1
BMPR2	GMPS	1	1
BMPR2	BIRC3	1	1
BMPR2	ATM	1	1
BMPR2	ZNF486	1	1
BMPR2	CREBBP	1	1
FYN	SLC12A6	1	1
ALDH1A3	LARP4B	1	1
ALDH1A3	PTGDR	1	1
ALDH1A3	ATM	1	1
LARP4B	GPATCH8	1	1
LARP4B	CDK12	1	1
LARP4B	GMPS	1	1
LARP4B	PRPS1	1	1
LARP4B	CREBBP	1	1
BCORL1	GPATCH8	1	1
BCORL1	MAP4K3	1	1
BCORL1	SLC12A6	1	1
BCORL1	ATM	1	1
BCORL1	ZNF486	1	1
BCORL1	CREBBP	1	1
GPATCH8	PRPS1	1	1
GPATCH8	ATM	1	1
GPATCH8	CREBBP	1	1
MAP4K3	NEXN	1	1
MAP4K3	GMPS	1	1
MAP4K3	ATM	1	1
SETD2	SLC12A6	1	1
SETD2	CDK12	1	1
SETD2	ATM	1	1
SETD2	CREBBP	1	1
SLC12A6	ATM	1	1
SLC12A6	CREBBP	1	1
SLC12A6	CTNNB1	1	1
CDK12	BIRC3	1	1
CDK12	ATM	1	1
CDK12	CREBBP	1	1
GMPS	KDM6A	1	1
PRPS1	ATM	1	1
BIRC3	ATM	1	1
ATM	CREBBP	1	1
ATM	CTNNB1	1	1
ATM	KDM6A	1	1
12p-Amp	12q-Amp	1	1
12p-Amp	16q-Amp	1	1
12p-Amp	2p-Amp	1	1
12p-Amp	2q-Amp	1	1
12p-Amp	7p-Amp	1	1
12p-Amp	7q-Amp	1	1
12p-Amp	8p-Amp	1	1
12p-Amp	Amp_1q31.1	1	1
12p-Amp	Amp_2q33.1	1	1
12p-Amp	Amp_8p11.23	1	1
12p-Amp	Amp_8q24.21	1	1
12p-Amp	Amp_12p13.33	1	1
12p-Amp	Amp_19q12	1	1
12q-Amp	2p-Amp	1	1
12q-Amp	2q-Amp	1	1
12q-Amp	7q-Amp	1	1
12q-Amp	8p-Amp	1	1
12q-Amp	Amp_2q33.1	1	1
12q-Amp	Amp_8p11.23	1	1
12q-Amp	Amp_12p13.33	1	1
12q-Amp	Amp_19q12	1	1
13q-Amp	16p-Amp	1	1
13q-Amp	16q-Amp	1	1
13q-Amp	20p-Amp	1	1
13q-Amp	20q-Amp	1	1
13q-Amp	7p-Amp	1	1
13q-Amp	7q-Amp	1	1
13q-Amp	14q-Del	1	1
13q-Amp	17p-Del	1	1
13q-Amp	18p-Del	1	1
13q-Amp	18q-Del	1	1
13q-Amp	22q-Del	1	1
13q-Amp	4q-Del	1	1
13q-Amp	Amp_13q12.13	1	1
13q-Amp	Amp_13q12.2	1	1
13q-Amp	Amp_13q22.1	1	1
13q-Amp	Amp_15q26.1	1	1
13q-Amp	Amp_16p11.2	1	1
13q-Amp	Amp_20p12.1	1	1
13q-Amp	Amp_20p11.21	1	1
13q-Amp	Amp_20q11.21	1	1
13q-Amp	Amp_20q12	1	1
13q-Amp	Amp_20q13.12	1	1
13q-Amp	Del_4q35.1	1	1
13q-Amp	Del_8p23.2	1	1
13q-Amp	Del_8p22	1	1
13q-Amp	Del_14q11.2	1	1
13q-Amp	Del_15q11.2	1	1
13q-Amp	Del_17p12	1	1
13q-Amp	Del_18p11.31	1	1
13q-Amp	Del_18q12.2	1	1
13q-Amp	Del_18q21.2	1	1
13q-Amp	Del_18q22.1	1	1
16p-Amp	16q-Amp	1	1
16p-Amp	6p-Amp	1	1
16p-Amp	7p-Amp	1	1
16p-Amp	18p-Del	1	1
16p-Amp	18q-Del	1	1
16p-Amp	Amp_5p12	1	1
16p-Amp	Amp_13q12.13	1	1
16p-Amp	Amp_13q12.2	1	1
16p-Amp	Amp_13q22.1	1	1
16p-Amp	Amp_16p11.2	1	1
16p-Amp	Amp_20p11.21	1	1
16p-Amp	Amp_20q11.21	1	1
16p-Amp	Amp_20q12	1	1
16p-Amp	Amp_20q13.12	1	1
16p-Amp	Del_18p11.31	1	1
16p-Amp	Del_18q21.2	1	1
16p-Amp	Del_18q22.1	1	1
16q-Amp	20q-Amp	1	1
16q-Amp	6p-Amp	1	1
16q-Amp	7p-Amp	1	1
16q-Amp	7q-Amp	1	1
16q-Amp	18p-Del	1	1
16q-Amp	18q-Del	1	1
16q-Amp	Amp_5p12	1	1
16q-Amp	Amp_13q12.13	1	1
16q-Amp	Amp_13q12.2	1	1
16q-Amp	Amp_13q22.1	1	1
16q-Amp	Amp_16p11.2	1	1
16q-Amp	Amp_20p11.21	1	1
16q-Amp	Amp_20q11.21	1	1
16q-Amp	Amp_20q12	1	1
16q-Amp	Amp_20q13.12	1	1
16q-Amp	Del_18p11.31	1	1
16q-Amp	Del_18q21.2	1	1
16q-Amp	Del_18q22.1	1	1
17q-Amp	20q-Amp	1	1
17q-Amp	2p-Amp	1	1
17q-Amp	2q-Amp	1	1
17q-Amp	7p-Amp	1	1
17q-Amp	7q-Amp	1	1
17q-Amp	Amp_2q33.1	1	1
17q-Amp	Amp_17q12	1	1
17q-Amp	Amp_17q24.1	1	1
17q-Amp	Amp_20q11.21	1	1
17q-Amp	Amp_20q12	1	1
17q-Amp	Amp_20q13.12	1	1
17q-Amp	Del_17p12	1	1
17q-Amp	Del_18p11.31	1	1
20p-Amp	20q-Amp	1	1
20p-Amp	7p-Amp	1	1
20p-Amp	7q-Amp	1	1
20p-Amp	8q-Amp	1	1
20p-Amp	18p-Del	1	1
20p-Amp	18q-Del	1	1
20p-Amp	Amp_5p12	1	1
20p-Amp	Amp_8q24.21	1	1
20p-Amp	Amp_13q12.13	1	1
20p-Amp	Amp_13q12.2	1	1
20p-Amp	Amp_13q22.1	1	1
20p-Amp	Amp_19q12	1	1
20p-Amp	Amp_20p12.1	1	1
20p-Amp	Amp_20p11.21	1	1
20p-Amp	Amp_20q11.21	1	1
20p-Amp	Amp_20q12	1	1
20p-Amp	Amp_20q13.12	1	1
20p-Amp	Del_18p11.31	1	1
20p-Amp	Del_18q12.2	1	1
20p-Amp	Del_18q21.2	1	1
20p-Amp	Del_18q22.1	1	1
20q-Amp	2p-Amp	1	1
20q-Amp	2q-Amp	1	1
20q-Amp	7p-Amp	1	1
20q-Amp	7q-Amp	1	1
20q-Amp	8q-Amp	1	1
20q-Amp	14q-Del	1	1
20q-Amp	15q-Del	1	1
20q-Amp	17p-Del	1	1
20q-Amp	18p-Del	1	1
20q-Amp	18q-Del	1	1
20q-Amp	8p-Del	1	1
20q-Amp	Amp_5p12	1	1
20q-Amp	Amp_8p11.23	1	1
20q-Amp	Amp_8p11.21	1	1
20q-Amp	Amp_8q24.21	1	1
20q-Amp	Amp_11p15.5	1	1
20q-Amp	Amp_13q12.13	1	1
20q-Amp	Amp_13q12.2	1	1
20q-Amp	Amp_13q22.1	1	1
20q-Amp	Amp_17q12	1	1
20q-Amp	Amp_19q12	1	1
20q-Amp	Amp_20p12.1	1	1
20q-Amp	Amp_20p11.21	1	1
20q-Amp	Amp_20q11.21	1	1
20q-Amp	Amp_20q12	1	1
20q-Amp	Amp_20q13.12	1	1
20q-Amp	Del_1p36.11	1	1
20q-Amp	Del_8p23.2	1	1
20q-Amp	Del_8p22	1	1
20q-Amp	Del_14q11.2	1	1
20q-Amp	Del_15q11.2	1	1
20q-Amp	Del_15q15.2	1	1
20q-Amp	Del_15q21.1	1	1
20q-Amp	Del_15q22.33	1	1
20q-Amp	Del_17p12	1	1
20q-Amp	Del_18p11.31	1	1
20q-Amp	Del_18q12.2	1	1
20q-Amp	Del_18q21.2	1	1
20q-Amp	Del_18q22.1	1	1
2p-Amp	2q-Amp	1	1
2p-Amp	6p-Amp	1	1
2p-Amp	8p-Amp	1	1
2p-Amp	8q-Amp	1	1
2p-Amp	Amp_2q33.1	1	1
2p-Amp	Amp_6p21.1	1	1
2p-Amp	Amp_8p11.23	1	1
2p-Amp	Amp_8p11.21	1	1
2p-Amp	Amp_8q24.21	1	1
2p-Amp	Amp_11p15.5	1	1
2p-Amp	Amp_15q26.1	1	1
2p-Amp	Amp_17q12	1	1
2p-Amp	Amp_17q24.1	1	1
2p-Amp	Amp_20q11.21	1	1
2p-Amp	Amp_20q12	1	1
2p-Amp	Amp_20q13.12	1	1
2p-Amp	Del_2p12	1	1
2p-Amp	Del_12p13.1	1	1
2q-Amp	8p-Amp	1	1
2q-Amp	8q-Amp	1	1
2q-Amp	Amp_2q33.1	1	1
2q-Amp	Amp_8p11.23	1	1
2q-Amp	Amp_8p11.21	1	1
2q-Amp	Amp_8q24.21	1	1
2q-Amp	Amp_11p15.5	1	1
2q-Amp	Amp_12p13.33	1	1
2q-Amp	Amp_15q26.1	1	1
2q-Amp	Amp_17q12	1	1
2q-Amp	Amp_17q24.1	1	1
2q-Amp	Amp_20q11.21	1	1
2q-Amp	Amp_20q12	1	1
2q-Amp	Amp_20q13.12	1	1
2q-Amp	Del_2p12	1	1
2q-Amp	Del_12p13.1	1	1
6p-Amp	7p-Amp	1	1
6p-Amp	7q-Amp	1	1
6p-Amp	8p-Amp	1	1
6p-Amp	8q-Amp	1	1
6p-Amp	Amp_6p21.1	1	1
6p-Amp	Amp_8p11.21	1	1
6p-Amp	Amp_8q24.21	1	1
6p-Amp	Amp_16p11.2	1	1
7p-Amp	7q-Amp	1	1
7p-Amp	8p-Amp	1	1
7p-Amp	8q-Amp	1	1
7p-Amp	17p-Del	1	1
7p-Amp	18p-Del	1	1
7p-Amp	Amp_8p11.23	1	1
7p-Amp	Amp_8p11.21	1	1
7p-Amp	Amp_8q24.21	1	1
7p-Amp	Amp_13q12.13	1	1
7p-Amp	Amp_13q12.2	1	1
7p-Amp	Amp_13q22.1	1	1
7p-Amp	Amp_16p11.2	1	1
7p-Amp	Amp_19q12	1	1
7p-Amp	Amp_20p12.1	1	1
7p-Amp	Amp_20p11.21	1	1
7p-Amp	Amp_20q11.21	1	1
7p-Amp	Amp_20q12	1	1
7p-Amp	Amp_20q13.12	1	1
7p-Amp	Del_8p23.2	1	1
7p-Amp	Del_8p22	1	1
7p-Amp	Del_17p12	1	1
7p-Amp	Del_18p11.31	1	1
7p-Amp	Del_18q12.2	1	1
7p-Amp	Del_18q21.2	1	1
7p-Amp	Del_18q22.1	1	1
7q-Amp	8p-Amp	1	1
7q-Amp	8q-Amp	1	1
7q-Amp	Amp_8p11.23	1	1
7q-Amp	Amp_8q24.21	1	1
7q-Amp	Amp_13q12.13	1	1
7q-Amp	Amp_13q12.2	1	1
7q-Amp	Amp_13q22.1	1	1
7q-Amp	Amp_16p11.2	1	1
7q-Amp	Amp_17q12	1	1
7q-Amp	Amp_19q12	1	1
7q-Amp	Amp_20p12.1	1	1
7q-Amp	Amp_20p11.21	1	1
7q-Amp	Amp_20q11.21	1	1
7q-Amp	Amp_20q12	1	1
7q-Amp	Amp_20q13.12	1	1
7q-Amp	Del_18q22.1	1	1
8p-Amp	8q-Amp	1	1
8p-Amp	Amp_8p11.23	1	1
8p-Amp	Amp_8p11.21	1	1
8p-Amp	Amp_8q24.21	1	1
8p-Amp	Amp_12p13.33	1	1
8p-Amp	Amp_19q12	1	1
8p-Amp	Amp_20p12.1	1	1
8q-Amp	5q-Del	1	1
8q-Amp	Amp_8p11.23	1	1
8q-Amp	Amp_8p11.21	1	1
8q-Amp	Amp_8q24.21	1	1
8q-Amp	Amp_20p12.1	1	1
8q-Amp	Amp_20p11.21	1	1
8q-Amp	Amp_20q11.21	1	1
8q-Amp	Amp_20q12	1	1
8q-Amp	Amp_20q13.12	1	1
8q-Amp	Del_8p23.2	1	1
8q-Amp	Del_8p22	1	1
9p-Amp	Amp_10q22.3	1	1
14q-Del	15q-Del	1	1
14q-Del	17p-Del	1	1
14q-Del	18p-Del	1	1
14q-Del	18q-Del	1	1
14q-Del	1p-Del	1	1
14q-Del	22q-Del	1	1
14q-Del	4p-Del	1	1
14q-Del	4q-Del	1	1
14q-Del	8p-Del	1	1
14q-Del	Amp_13q12.13	1	1
14q-Del	Amp_13q12.2	1	1
14q-Del	Amp_13q22.1	1	1
14q-Del	Amp_20q11.21	1	1
14q-Del	Amp_20q12	1	1
14q-Del	Amp_20q13.12	1	1
14q-Del	Del_1p36.11	1	1
14q-Del	Del_1p33	1	1
14q-Del	Del_1p13.2	1	1
14q-Del	Del_3p26.3	1	1
14q-Del	Del_4p16.1	1	1
14q-Del	Del_4q22.1	1	1
14q-Del	Del_4q35.1	1	1
14q-Del	Del_8p23.2	1	1
14q-Del	Del_8p22	1	1
14q-Del	Del_12p13.1	1	1
14q-Del	Del_14q11.2	1	1
14q-Del	Del_15q11.2	1	1
14q-Del	Del_15q15.2	1	1
14q-Del	Del_15q21.1	1	1
14q-Del	Del_15q22.33	1	1
14q-Del	Del_17p12	1	1
14q-Del	Del_18p11.31	1	1
14q-Del	Del_18q12.2	1	1
14q-Del	Del_18q21.2	1	1
14q-Del	Del_18q22.1	1	1
14q-Del	Del_21q21.1	1	1
14q-Del	Del_22q13.32	1	1
15q-Del	17p-Del	1	1
15q-Del	18p-Del	1	1
15q-Del	18q-Del	1	1
15q-Del	20p-Del	1	1
15q-Del	22q-Del	1	1
15q-Del	4p-Del	1	1
15q-Del	4q-Del	1	1
15q-Del	8p-Del	1	1
15q-Del	Amp_13q12.13	1	1
15q-Del	Amp_13q12.2	1	1
15q-Del	Amp_13q22.1	1	1
15q-Del	Amp_20q11.21	1	1
15q-Del	Amp_20q12	1	1
15q-Del	Amp_20q13.12	1	1
15q-Del	Del_1p13.2	1	1
15q-Del	Del_2p12	1	1
15q-Del	Del_4p16.1	1	1
15q-Del	Del_4q22.1	1	1
15q-Del	Del_4q35.1	1	1
15q-Del	Del_5q23.3	1	1
15q-Del	Del_8p23.2	1	1
15q-Del	Del_8p22	1	1
15q-Del	Del_14q11.2	1	1
15q-Del	Del_15q11.2	1	1
15q-Del	Del_15q15.2	1	1
15q-Del	Del_15q21.1	1	1
15q-Del	Del_15q22.33	1	1
15q-Del	Del_17p12	1	1
15q-Del	Del_18p11.31	1	1
15q-Del	Del_18q12.2	1	1
15q-Del	Del_18q21.2	1	1
15q-Del	Del_18q22.1	1	1
15q-Del	Del_22q13.32	1	1
17p-Del	18p-Del	1	1
17p-Del	18q-Del	1	1
17p-Del	20p-Del	1	1
17p-Del	21q-Del	1	1
17p-Del	22q-Del	1	1
17p-Del	4p-Del	1	1
17p-Del	4q-Del	1	1
17p-Del	5q-Del	1	1
17p-Del	8p-Del	1	1
17p-Del	Amp_13q12.13	1	1
17p-Del	Amp_13q12.2	1	1
17p-Del	Amp_13q22.1	1	1
17p-Del	Amp_20q11.21	1	1
17p-Del	Amp_20q12	1	1
17p-Del	Amp_20q13.12	1	1
17p-Del	Del_1p36.11	1	1
17p-Del	Del_1p13.2	1	1
17p-Del	Del_4p16.1	1	1
17p-Del	Del_4q22.1	1	1
17p-Del	Del_4q35.1	1	1
17p-Del	Del_5q12.1	1	1
17p-Del	Del_5q21.2	1	1
17p-Del	Del_5q22.2	1	1
17p-Del	Del_5q23.3	1	1
17p-Del	Del_6q26	1	1
17p-Del	Del_8p23.2	1	1
17p-Del	Del_8p22	1	1
17p-Del	Del_8q11.1	1	1
17p-Del	Del_10q21.1	1	1
17p-Del	Del_10q23.31	1	1
17p-Del	Del_10q25.2	1	1
17p-Del	Del_12p13.1	1	1
17p-Del	Del_14q11.2	1	1
17p-Del	Del_15q11.2	1	1
17p-Del	Del_15q15.2	1	1
17p-Del	Del_15q21.1	1	1
17p-Del	Del_15q22.33	1	1
17p-Del	Del_17p12	1	1
17p-Del	Del_17q24.3	1	1
17p-Del	Del_18p11.31	1	1
17p-Del	Del_18q12.2	1	1
17p-Del	Del_18q21.2	1	1
17p-Del	Del_18q22.1	1	1
17p-Del	Del_19p13.3	1	1
17p-Del	Del_21q11.2	1	1
17p-Del	Del_21q21.1	1	1
17p-Del	Del_22q13.32	1	1
18p-Del	18q-Del	1	1
18p-Del	1p-Del	1	1
18p-Del	20p-Del	1	1
18p-Del	21q-Del	1	1
18p-Del	22q-Del	1	1
18p-Del	4p-Del	1	1
18p-Del	4q-Del	1	1
18p-Del	5q-Del	1	1
18p-Del	8p-Del	1	1
18p-Del	Amp_13q12.13	1	1
18p-Del	Amp_13q12.2	1	1
18p-Del	Amp_13q22.1	1	1
18p-Del	Amp_20p12.1	1	1
18p-Del	Amp_20p11.21	1	1
18p-Del	Amp_20q11.21	1	1
18p-Del	Amp_20q12	1	1
18p-Del	Amp_20q13.12	1	1
18p-Del	Del_1p36.11	1	1
18p-Del	Del_1p33	1	1
18p-Del	Del_1p13.2	1	1
18p-Del	Del_4p16.1	1	1
18p-Del	Del_4q22.1	1	1
18p-Del	Del_4q35.1	1	1
18p-Del	Del_5q12.1	1	1
18p-Del	Del_5q21.2	1	1
18p-Del	Del_5q22.2	1	1
18p-Del	Del_5q23.3	1	1
18p-Del	Del_8p23.2	1	1
18p-Del	Del_8p22	1	1
18p-Del	Del_10q21.1	1	1
18p-Del	Del_10q23.31	1	1
18p-Del	Del_10q25.2	1	1
18p-Del	Del_12p13.1	1	1
18p-Del	Del_14q11.2	1	1
18p-Del	Del_15q11.2	1	1
18p-Del	Del_15q15.2	1	1
18p-Del	Del_15q21.1	1	1
18p-Del	Del_15q22.33	1	1
18p-Del	Del_17p12	1	1
18p-Del	Del_18p11.31	1	1
18p-Del	Del_18q12.2	1	1
18p-Del	Del_18q21.2	1	1
18p-Del	Del_18q22.1	1	1
18p-Del	Del_19p13.3	1	1
18p-Del	Del_21q11.2	1	1
18p-Del	Del_21q21.1	1	1
18p-Del	Del_22q13.32	1	1
18q-Del	1p-Del	1	1
18q-Del	20p-Del	1	1
18q-Del	21q-Del	1	1
18q-Del	22q-Del	1	1
18q-Del	4p-Del	1	1
18q-Del	4q-Del	1	1
18q-Del	5q-Del	1	1
18q-Del	8p-Del	1	1
18q-Del	Amp_8p11.21	1	1
18q-Del	Amp_8q24.21	1	1
18q-Del	Amp_13q12.13	1	1
18q-Del	Amp_13q12.2	1	1
18q-Del	Amp_13q22.1	1	1
18q-Del	Amp_20p12.1	1	1
18q-Del	Amp_20p11.21	1	1
18q-Del	Amp_20q11.21	1	1
18q-Del	Amp_20q12	1	1
18q-Del	Amp_20q13.12	1	1
18q-Del	Del_1p36.11	1	1
18q-Del	Del_1p33	1	1
18q-Del	Del_1p13.2	1	1
18q-Del	Del_4p16.1	1	1
18q-Del	Del_4q22.1	1	1
18q-Del	Del_4q35.1	1	1
18q-Del	Del_5q12.1	1	1
18q-Del	Del_5q21.2	1	1
18q-Del	Del_5q22.2	1	1
18q-Del	Del_5q23.3	1	1
18q-Del	Del_6q26	1	1
18q-Del	Del_8p23.2	1	1
18q-Del	Del_8p22	1	1
18q-Del	Del_10q23.31	1	1
18q-Del	Del_12p13.1	1	1
18q-Del	Del_14q11.2	1	1
18q-Del	Del_15q11.2	1	1
18q-Del	Del_15q15.2	1	1
18q-Del	Del_15q21.1	1	1
18q-Del	Del_15q22.33	1	1
18q-Del	Del_17p12	1	1
18q-Del	Del_17q24.3	1	1
18q-Del	Del_18p11.31	1	1
18q-Del	Del_18q12.2	1	1
18q-Del	Del_18q21.2	1	1
18q-Del	Del_18q22.1	1	1
18q-Del	Del_19p13.3	1	1
18q-Del	Del_21q11.2	1	1
18q-Del	Del_21q21.1	1	1
18q-Del	Del_22q13.32	1	1
1p-Del	21q-Del	1	1
1p-Del	22q-Del	1	1
1p-Del	4p-Del	1	1
1p-Del	4q-Del	1	1
1p-Del	Del_1p36.11	1	1
1p-Del	Del_1p33	1	1
1p-Del	Del_1p13.2	1	1
1p-Del	Del_3p26.3	1	1
1p-Del	Del_4p16.1	1	1
1p-Del	Del_4q35.1	1	1
1p-Del	Del_8q11.1	1	1
1p-Del	Del_18q12.2	1	1
1p-Del	Del_18q21.2	1	1
1p-Del	Del_18q22.1	1	1
1p-Del	Del_21q11.2	1	1
1p-Del	Del_21q21.1	1	1
1p-Del	Del_22q13.32	1	1
20p-Del	22q-Del	1	1
20p-Del	Amp_20q11.21	1	1
20p-Del	Amp_20q12	1	1
20p-Del	Amp_20q13.12	1	1
20p-Del	Del_1p36.11	1	1
20p-Del	Del_17p12	1	1
20p-Del	Del_18p11.31	1	1
20p-Del	Del_18q12.2	1	1
20p-Del	Del_18q21.2	1	1
20p-Del	Del_18q22.1	1	1
21q-Del	22q-Del	1	1
21q-Del	Del_1p36.11	1	1
21q-Del	Del_1p13.2	1	1
21q-Del	Del_4q35.1	1	1
21q-Del	Del_15q11.2	1	1
21q-Del	Del_15q22.33	1	1
21q-Del	Del_17p12	1	1
21q-Del	Del_18p11.31	1	1
21q-Del	Del_18q12.2	1	1
21q-Del	Del_18q21.2	1	1
21q-Del	Del_18q22.1	1	1
21q-Del	Del_21q11.2	1	1
21q-Del	Del_21q21.1	1	1
21q-Del	Del_22q13.32	1	1
22q-Del	4p-Del	1	1
22q-Del	4q-Del	1	1
22q-Del	8p-Del	1	1
22q-Del	Amp_13q12.13	1	1
22q-Del	Amp_13q12.2	1	1
22q-Del	Amp_13q22.1	1	1
22q-Del	Del_1p36.11	1	1
22q-Del	Del_1p33	1	1
22q-Del	Del_1p13.2	1	1
22q-Del	Del_3p26.3	1	1
22q-Del	Del_4p16.1	1	1
22q-Del	Del_4q22.1	1	1
22q-Del	Del_4q35.1	1	1
22q-Del	Del_5q23.3	1	1
22q-Del	Del_8p23.2	1	1
22q-Del	Del_8p22	1	1
22q-Del	Del_10q21.1	1	1
22q-Del	Del_10q23.31	1	1
22q-Del	Del_10q25.2	1	1
22q-Del	Del_14q11.2	1	1
22q-Del	Del_15q11.2	1	1
22q-Del	Del_15q15.2	1	1
22q-Del	Del_15q21.1	1	1
22q-Del	Del_15q22.33	1	1
22q-Del	Del_17p12	1	1
22q-Del	Del_18p11.31	1	1
22q-Del	Del_18q12.2	1	1
22q-Del	Del_18q21.2	1	1
22q-Del	Del_18q22.1	1	1
22q-Del	Del_19p13.3	1	1
22q-Del	Del_21q21.1	1	1
22q-Del	Del_22q13.32	1	1
4p-Del	4q-Del	1	1
4p-Del	5q-Del	1	1
4p-Del	8p-Del	1	1
4p-Del	Amp_13q12.13	1	1
4p-Del	Amp_13q12.2	1	1
4p-Del	Del_1p36.11	1	1
4p-Del	Del_1p33	1	1
4p-Del	Del_1p13.2	1	1
4p-Del	Del_3p26.3	1	1
4p-Del	Del_4p16.1	1	1
4p-Del	Del_4q22.1	1	1
4p-Del	Del_4q35.1	1	1
4p-Del	Del_5q12.1	1	1
4p-Del	Del_5q21.2	1	1
4p-Del	Del_5q22.2	1	1
4p-Del	Del_5q23.3	1	1
4p-Del	Del_8p23.2	1	1
4p-Del	Del_8p22	1	1
4p-Del	Del_8q11.1	1	1
4p-Del	Del_10q21.1	1	1
4p-Del	Del_15q11.2	1	1
4p-Del	Del_15q15.2	1	1
4p-Del	Del_15q21.1	1	1
4p-Del	Del_15q22.33	1	1
4p-Del	Del_17p12	1	1
4p-Del	Del_17q24.3	1	1
4p-Del	Del_18p11.31	1	1
4p-Del	Del_18q12.2	1	1
4p-Del	Del_18q21.2	1	1
4p-Del	Del_18q22.1	1	1
4p-Del	Del_21q11.2	1	1
4p-Del	Del_21q21.1	1	1
4p-Del	Del_22q13.32	1	1
4q-Del	5q-Del	1	1
4q-Del	8p-Del	1	1
4q-Del	Amp_13q12.13	1	1
4q-Del	Amp_13q12.2	1	1
4q-Del	Amp_13q22.1	1	1
4q-Del	Del_1p36.11	1	1
4q-Del	Del_1p33	1	1
4q-Del	Del_1p13.2	1	1
4q-Del	Del_4p16.1	1	1
4q-Del	Del_4q22.1	1	1
4q-Del	Del_4q35.1	1	1
4q-Del	Del_5q12.1	1	1
4q-Del	Del_5q21.2	1	1
4q-Del	Del_5q22.2	1	1
4q-Del	Del_5q23.3	1	1
4q-Del	Del_8p23.2	1	1
4q-Del	Del_8p22	1	1
4q-Del	Del_8q11.1	1	1
4q-Del	Del_10q21.1	1	1
4q-Del	Del_15q11.2	1	1
4q-Del	Del_15q15.2	1	1
4q-Del	Del_15q21.1	1	1
4q-Del	Del_15q22.33	1	1
4q-Del	Del_17p12	1	1
4q-Del	Del_17q24.3	1	1
4q-Del	Del_18p11.31	1	1
4q-Del	Del_18q12.2	1	1
4q-Del	Del_18q21.2	1	1
4q-Del	Del_18q22.1	1	1
4q-Del	Del_19p13.3	1	1
4q-Del	Del_21q11.2	1	1
4q-Del	Del_21q21.1	1	1
4q-Del	Del_22q13.32	1	1
5q-Del	Amp_5p12	1	1
5q-Del	Amp_8p11.21	1	1
5q-Del	Amp_13q22.1	1	1
5q-Del	Del_4q22.1	1	1
5q-Del	Del_5q12.1	1	1
5q-Del	Del_5q21.2	1	1
5q-Del	Del_5q22.2	1	1
5q-Del	Del_5q23.3	1	1
5q-Del	Del_8p23.2	1	1
5q-Del	Del_8p22	1	1
5q-Del	Del_15q15.2	1	1
5q-Del	Del_15q21.1	1	1
5q-Del	Del_17p12	1	1
5q-Del	Del_18q12.2	1	1
5q-Del	Del_18q21.2	1	1
5q-Del	Del_18q22.1	1	1
5q-Del	Del_19p13.3	1	1
8p-Del	Amp_8q24.21	1	1
8p-Del	Amp_20q11.21	1	1
8p-Del	Amp_20q12	1	1
8p-Del	Amp_20q13.12	1	1
8p-Del	Del_4p16.1	1	1
8p-Del	Del_4q22.1	1	1
8p-Del	Del_4q35.1	1	1
8p-Del	Del_8p23.2	1	1
8p-Del	Del_8p22	1	1
8p-Del	Del_8q11.1	1	1
8p-Del	Del_10q23.31	1	1
8p-Del	Del_15q11.2	1	1
8p-Del	Del_15q15.2	1	1
8p-Del	Del_15q21.1	1	1
8p-Del	Del_15q22.33	1	1
8p-Del	Del_17p12	1	1
8p-Del	Del_18p11.31	1	1
8p-Del	Del_18q12.2	1	1
8p-Del	Del_18q21.2	1	1
8p-Del	Del_18q22.1	1	1
8p-Del	Del_22q13.32	1	1
Amp_2q33.1	Amp_8p11.23	1	1
Amp_2q33.1	Amp_11p15.5	1	1
Amp_2q33.1	Amp_20p12.1	1	1
Amp_2q33.1	Del_2p12	1	1
Amp_5p12	Amp_20p12.1	1	1
Amp_5p12	Amp_20p11.21	1	1
Amp_5p12	Amp_20q12	1	1
Amp_6p21.1	Del_2p12	1	1
Amp_6p21.1	Del_3p26.3	1	1
Amp_6p21.1	Del_3q26.31	1	1
Amp_6p21.1	Del_6p25.3	1	1
Amp_6p21.1	Del_22q13.32	1	1
Amp_8p11.23	Amp_8p11.21	1	1
Amp_8p11.23	Amp_8q24.21	1	1
Amp_8p11.23	Amp_20p11.21	1	1
Amp_8p11.23	Amp_20q11.21	1	1
Amp_8p11.23	Amp_20q12	1	1
Amp_8p11.23	Amp_20q13.12	1	1
Amp_8p11.23	Del_8p23.2	1	1
Amp_8p11.23	Del_8p22	1	1
Amp_8p11.21	Amp_8q24.21	1	1
Amp_8p11.21	Amp_12p13.33	1	1
Amp_8p11.21	Amp_13q12.13	1	1
Amp_8p11.21	Amp_13q22.1	1	1
Amp_8p11.21	Amp_20q11.21	1	1
Amp_8p11.21	Amp_20q12	1	1
Amp_8p11.21	Amp_20q13.12	1	1
Amp_8p11.21	Del_8p23.2	1	1
Amp_8p11.21	Del_8p22	1	1
Amp_8p11.21	Del_18q21.2	1	1
Amp_8p11.21	Del_18q22.1	1	1
Amp_8q24.21	Amp_12p13.33	1	1
Amp_8q24.21	Amp_20p12.1	1	1
Amp_8q24.21	Amp_20p11.21	1	1
Amp_8q24.21	Amp_20q11.21	1	1
Amp_8q24.21	Amp_20q12	1	1
Amp_8q24.21	Amp_20q13.12	1	1
Amp_8q24.21	Del_8p23.2	1	1
Amp_8q24.21	Del_8p22	1	1
Amp_8q24.21	Del_17p12	1	1
Amp_8q24.21	Del_18q12.2	1	1
Amp_8q24.21	Del_18q21.2	1	1
Amp_8q24.21	Del_18q22.1	1	1
Amp_10q22.3	Del_10q23.31	1	1
Amp_11p15.5	Amp_17q24.1	1	1
Amp_11p15.5	Amp_20q11.21	1	1
Amp_12p13.33	Amp_19q12	1	1
Amp_12p13.33	Del_16p13.3	1	1
Amp_13q12.13	Amp_13q12.2	1	1
Amp_13q12.13	Amp_13q22.1	1	1
Amp_13q12.13	Amp_16p11.2	1	1
Amp_13q12.13	Amp_20p12.1	1	1
Amp_13q12.13	Amp_20p11.21	1	1
Amp_13q12.13	Amp_20q11.21	1	1
Amp_13q12.13	Amp_20q12	1	1
Amp_13q12.13	Amp_20q13.12	1	1
Amp_13q12.13	Del_4p16.1	1	1
Amp_13q12.13	Del_4q22.1	1	1
Amp_13q12.13	Del_4q35.1	1	1
Amp_13q12.13	Del_8p23.2	1	1
Amp_13q12.13	Del_8p22	1	1
Amp_13q12.13	Del_12p13.1	1	1
Amp_13q12.13	Del_14q11.2	1	1
Amp_13q12.13	Del_15q11.2	1	1
Amp_13q12.13	Del_15q15.2	1	1
Amp_13q12.13	Del_15q22.33	1	1
Amp_13q12.13	Del_17p12	1	1
Amp_13q12.13	Del_18p11.31	1	1
Amp_13q12.13	Del_18q12.2	1	1
Amp_13q12.13	Del_18q21.2	1	1
Amp_13q12.13	Del_18q22.1	1	1
Amp_13q12.2	Amp_13q22.1	1	1
Amp_13q12.2	Amp_16p11.2	1	1
Amp_13q12.2	Amp_20p12.1	1	1
Amp_13q12.2	Amp_20p11.21	1	1
Amp_13q12.2	Amp_20q11.21	1	1
Amp_13q12.2	Amp_20q12	1	1
Amp_13q12.2	Amp_20q13.12	1	1
Amp_13q12.2	Del_1p13.2	1	1
Amp_13q12.2	Del_4p16.1	1	1
Amp_13q12.2	Del_4q22.1	1	1
Amp_13q12.2	Del_4q35.1	1	1
Amp_13q12.2	Del_8p23.2	1	1
Amp_13q12.2	Del_8p22	1	1
Amp_13q12.2	Del_12p13.1	1	1
Amp_13q12.2	Del_14q11.2	1	1
Amp_13q12.2	Del_15q11.2	1	1
Amp_13q12.2	Del_15q15.2	1	1
Amp_13q12.2	Del_15q21.1	1	1
Amp_13q12.2	Del_15q22.33	1	1
Amp_13q12.2	Del_17p12	1	1
Amp_13q12.2	Del_18p11.31	1	1
Amp_13q12.2	Del_18q12.2	1	1
Amp_13q12.2	Del_18q21.2	1	1
Amp_13q12.2	Del_18q22.1	1	1
Amp_13q12.2	Del_22q13.32	1	1
Amp_13q22.1	Amp_16p11.2	1	1
Amp_13q22.1	Amp_17q12	1	1
Amp_13q22.1	Amp_20p12.1	1	1
Amp_13q22.1	Amp_20p11.21	1	1
Amp_13q22.1	Amp_20q11.21	1	1
Amp_13q22.1	Amp_20q12	1	1
Amp_13q22.1	Amp_20q13.12	1	1
Amp_13q22.1	Del_4p16.1	1	1
Amp_13q22.1	Del_4q35.1	1	1
Amp_13q22.1	Del_8p23.2	1	1
Amp_13q22.1	Del_8p22	1	1
Amp_13q22.1	Del_12p13.1	1	1
Amp_13q22.1	Del_14q11.2	1	1
Amp_13q22.1	Del_15q11.2	1	1
Amp_13q22.1	Del_15q15.2	1	1
Amp_13q22.1	Del_17p12	1	1
Amp_13q22.1	Del_18p11.31	1	1
Amp_13q22.1	Del_18q12.2	1	1
Amp_13q22.1	Del_18q21.2	1	1
Amp_13q22.1	Del_18q22.1	1	1
Amp_13q22.1	Del_22q13.32	1	1
Amp_16p11.2	Amp_20p11.21	1	1
Amp_16p11.2	Amp_20q13.12	1	1
Amp_17q12	Amp_17q24.1	1	1
Amp_17q12	Amp_19q12	1	1
Amp_17q12	Amp_20p11.21	1	1
Amp_17q12	Amp_20q11.21	1	1
Amp_17q12	Amp_20q12	1	1
Amp_17q12	Amp_20q13.12	1	1
Amp_17q12	Del_17p12	1	1
Amp_17q24.1	Del_2p12	1	1
Amp_17q24.1	Del_17p12	1	1
Amp_17q24.1	Del_18p11.31	1	1
Amp_19q12	Amp_20p12.1	1	1
Amp_19q12	Amp_20q12	1	1
Amp_20p12.1	Amp_20p11.21	1	1
Amp_20p12.1	Amp_20q11.21	1	1
Amp_20p12.1	Amp_20q12	1	1
Amp_20p12.1	Amp_20q13.12	1	1
Amp_20p12.1	Del_18p11.31	1	1
Amp_20p11.21	Amp_20q11.21	1	1
Amp_20p11.21	Amp_20q12	1	1
Amp_20p11.21	Amp_20q13.12	1	1
Amp_20p11.21	Del_8p23.2	1	1
Amp_20p11.21	Del_8p22	1	1
Amp_20p11.21	Del_17p12	1	1
Amp_20p11.21	Del_18p11.31	1	1
Amp_20p11.21	Del_18q12.2	1	1
Amp_20p11.21	Del_18q21.2	1	1
Amp_20p11.21	Del_18q22.1	1	1
Amp_20q11.21	Amp_20q12	1	1
Amp_20q11.21	Amp_20q13.12	1	1
Amp_20q11.21	Del_1p36.11	1	1
Amp_20q11.21	Del_8p23.2	1	1
Amp_20q11.21	Del_8p22	1	1
Amp_20q11.21	Del_14q11.2	1	1
Amp_20q11.21	Del_15q11.2	1	1
Amp_20q11.21	Del_15q15.2	1	1
Amp_20q11.21	Del_15q21.1	1	1
Amp_20q11.21	Del_15q22.33	1	1
Amp_20q11.21	Del_17p12	1	1
Amp_20q11.21	Del_18p11.31	1	1
Amp_20q11.21	Del_18q12.2	1	1
Amp_20q11.21	Del_18q21.2	1	1
Amp_20q11.21	Del_18q22.1	1	1
Amp_20q11.21	Del_21q11.2	1	1
Amp_20q11.21	Del_21q21.1	1	1
Amp_20q12	Amp_20q13.12	1	1
Amp_20q12	Del_1p36.11	1	1
Amp_20q12	Del_8p23.2	1	1
Amp_20q12	Del_8p22	1	1
Amp_20q12	Del_14q11.2	1	1
Amp_20q12	Del_15q11.2	1	1
Amp_20q12	Del_15q15.2	1	1
Amp_20q12	Del_15q21.1	1	1
Amp_20q12	Del_15q22.33	1	1
Amp_20q12	Del_17p12	1	1
Amp_20q12	Del_18p11.31	1	1
Amp_20q12	Del_18q12.2	1	1
Amp_20q12	Del_18q21.2	1	1
Amp_20q12	Del_18q22.1	1	1
Amp_20q12	Del_21q11.2	1	1
Amp_20q12	Del_21q21.1	1	1
Amp_20q13.12	Del_1p36.11	1	1
Amp_20q13.12	Del_8p23.2	1	1
Amp_20q13.12	Del_8p22	1	1
Amp_20q13.12	Del_14q11.2	1	1
Amp_20q13.12	Del_15q11.2	1	1
Amp_20q13.12	Del_15q15.2	1	1
Amp_20q13.12	Del_15q21.1	1	1
Amp_20q13.12	Del_15q22.33	1	1
Amp_20q13.12	Del_17p12	1	1
Amp_20q13.12	Del_18p11.31	1	1
Amp_20q13.12	Del_18q12.2	1	1
Amp_20q13.12	Del_18q21.2	1	1
Amp_20q13.12	Del_18q22.1	1	1
Amp_20q13.12	Del_21q11.2	1	1
Amp_20q13.12	Del_21q21.1	1	1
Del_1p36.11	Del_1p33	1	1
Del_1p36.11	Del_1p13.2	1	1
Del_1p36.11	Del_4p16.1	1	1
Del_1p36.11	Del_4q22.1	1	1
Del_1p36.11	Del_4q35.1	1	1
Del_1p36.11	Del_8p23.2	1	1
Del_1p36.11	Del_8p22	1	1
Del_1p36.11	Del_8q11.1	1	1
Del_1p36.11	Del_10q21.1	1	1
Del_1p36.11	Del_14q11.2	1	1
Del_1p36.11	Del_16p13.3	1	1
Del_1p36.11	Del_17p12	1	1
Del_1p36.11	Del_18p11.31	1	1
Del_1p36.11	Del_18q12.2	1	1
Del_1p36.11	Del_18q21.2	1	1
Del_1p36.11	Del_18q22.1	1	1
Del_1p36.11	Del_21q11.2	1	1
Del_1p36.11	Del_21q21.1	1	1
Del_1p36.11	Del_22q13.32	1	1
Del_1p33	Del_1p13.2	1	1
Del_1p33	Del_4p16.1	1	1
Del_1p33	Del_4q22.1	1	1
Del_1p33	Del_8q11.1	1	1
Del_1p33	Del_15q11.2	1	1
Del_1p33	Del_15q21.1	1	1
Del_1p33	Del_17p12	1	1
Del_1p33	Del_18q12.2	1	1
Del_1p33	Del_18q21.2	1	1
Del_1p33	Del_18q22.1	1	1
Del_1p33	Del_21q21.1	1	1
Del_1p33	Del_22q13.32	1	1
Del_1p13.2	Del_3p26.3	1	1
Del_1p13.2	Del_4p16.1	1	1
Del_1p13.2	Del_4q22.1	1	1
Del_1p13.2	Del_4q35.1	1	1
Del_1p13.2	Del_6q26	1	1
Del_1p13.2	Del_8q11.1	1	1
Del_1p13.2	Del_15q11.2	1	1
Del_1p13.2	Del_15q22.33	1	1
Del_1p13.2	Del_17p12	1	1
Del_1p13.2	Del_18p11.31	1	1
Del_1p13.2	Del_18q12.2	1	1
Del_1p13.2	Del_18q21.2	1	1
Del_1p13.2	Del_18q22.1	1	1
Del_1p13.2	Del_21q11.2	1	1
Del_1p13.2	Del_21q21.1	1	1
Del_1p13.2	Del_22q13.32	1	1
Del_2p12	Del_2q22.1	1	1
Del_2p12	Del_4q35.1	1	1
Del_2p12	Del_8q11.1	1	1
Del_2p12	Del_10q21.1	1	1
Del_2p12	Del_15q22.33	1	1
Del_2q22.1	Del_4q35.1	1	1
Del_2q22.1	Del_8q11.1	1	1
Del_3p26.3	Del_3p14.2	1	1
Del_3p26.3	Del_3q26.31	1	1
Del_3p26.3	Del_4p16.1	1	1
Del_3p26.3	Del_6p25.3	1	1
Del_3p26.3	Del_16p13.3	1	1
Del_3p26.3	Del_18q12.2	1	1
Del_3p26.3	Del_18q22.1	1	1
Del_3p26.3	Del_22q13.32	1	1
Del_3p14.2	Del_3q26.31	1	1
Del_3p14.2	Del_4q22.1	1	1
Del_3p14.2	Del_4q35.1	1	1
Del_3p14.2	Del_7q31.1	1	1
Del_3q26.31	Del_4q22.1	1	1
Del_4p16.1	Del_4q22.1	1	1
Del_4p16.1	Del_4q35.1	1	1
Del_4p16.1	Del_5q12.1	1	1
Del_4p16.1	Del_8p23.2	1	1
Del_4p16.1	Del_8p22	1	1
Del_4p16.1	Del_8q11.1	1	1
Del_4p16.1	Del_10q21.1	1	1
Del_4p16.1	Del_10q23.31	1	1
Del_4p16.1	Del_15q11.2	1	1
Del_4p16.1	Del_15q15.2	1	1
Del_4p16.1	Del_15q21.1	1	1
Del_4p16.1	Del_15q22.33	1	1
Del_4p16.1	Del_16p13.3	1	1
Del_4p16.1	Del_17p12	1	1
Del_4p16.1	Del_18p11.31	1	1
Del_4p16.1	Del_18q12.2	1	1
Del_4p16.1	Del_18q21.2	1	1
Del_4p16.1	Del_18q22.1	1	1
Del_4p16.1	Del_19p13.3	1	1
Del_4p16.1	Del_22q13.32	1	1
Del_4q22.1	Del_4q35.1	1	1
Del_4q22.1	Del_5q12.1	1	1
Del_4q22.1	Del_5q21.2	1	1
Del_4q22.1	Del_5q22.2	1	1
Del_4q22.1	Del_5q23.3	1	1
Del_4q22.1	Del_6q26	1	1
Del_4q22.1	Del_7q31.1	1	1
Del_4q22.1	Del_8p23.2	1	1
Del_4q22.1	Del_8p22	1	1
Del_4q22.1	Del_8q11.1	1	1
Del_4q22.1	Del_10q21.1	1	1
Del_4q22.1	Del_12p13.1	1	1
Del_4q22.1	Del_14q11.2	1	1
Del_4q22.1	Del_15q11.2	1	1
Del_4q22.1	Del_15q15.2	1	1
Del_4q22.1	Del_15q21.1	1	1
Del_4q22.1	Del_15q22.33	1	1
Del_4q22.1	Del_16p13.3	1	1
Del_4q22.1	Del_17p12	1	1
Del_4q22.1	Del_18p11.31	1	1
Del_4q22.1	Del_18q12.2	1	1
Del_4q22.1	Del_18q21.2	1	1
Del_4q22.1	Del_18q22.1	1	1
Del_4q22.1	Del_19p13.3	1	1
Del_4q22.1	Del_22q13.32	1	1
Del_4q35.1	Del_5q12.1	1	1
Del_4q35.1	Del_5q21.2	1	1
Del_4q35.1	Del_5q22.2	1	1
Del_4q35.1	Del_5q23.3	1	1
Del_4q35.1	Del_7q31.1	1	1
Del_4q35.1	Del_8p23.2	1	1
Del_4q35.1	Del_8p22	1	1
Del_4q35.1	Del_8q11.1	1	1
Del_4q35.1	Del_10q21.1	1	1
Del_4q35.1	Del_10q23.31	1	1
Del_4q35.1	Del_10q25.2	1	1
Del_4q35.1	Del_14q11.2	1	1
Del_4q35.1	Del_15q11.2	1	1
Del_4q35.1	Del_15q22.33	1	1
Del_4q35.1	Del_16p13.3	1	1
Del_4q35.1	Del_17p12	1	1
Del_4q35.1	Del_17q24.3	1	1
Del_4q35.1	Del_18p11.31	1	1
Del_4q35.1	Del_18q12.2	1	1
Del_4q35.1	Del_18q21.2	1	1
Del_4q35.1	Del_18q22.1	1	1
Del_4q35.1	Del_21q11.2	1	1
Del_4q35.1	Del_21q21.1	1	1
Del_4q35.1	Del_22q13.32	1	1
Del_5q12.1	Del_5q21.2	1	1
Del_5q12.1	Del_5q22.2	1	1
Del_5q12.1	Del_5q23.3	1	1
Del_5q12.1	Del_8p23.2	1	1
Del_5q12.1	Del_8p22	1	1
Del_5q12.1	Del_17p12	1	1
Del_5q12.1	Del_18q12.2	1	1
Del_5q12.1	Del_18q21.2	1	1
Del_5q12.1	Del_18q22.1	1	1
Del_5q12.1	Del_19p13.3	1	1
Del_5q21.2	Del_5q22.2	1	1
Del_5q21.2	Del_5q23.3	1	1
Del_5q21.2	Del_15q11.2	1	1
Del_5q21.2	Del_15q15.2	1	1
Del_5q21.2	Del_15q21.1	1	1
Del_5q21.2	Del_17p12	1	1
Del_5q21.2	Del_18q12.2	1	1
Del_5q21.2	Del_18q21.2	1	1
Del_5q21.2	Del_18q22.1	1	1
Del_5q22.2	Del_5q23.3	1	1
Del_5q22.2	Del_15q11.2	1	1
Del_5q22.2	Del_17p12	1	1
Del_5q22.2	Del_18p11.31	1	1
Del_5q22.2	Del_18q12.2	1	1
Del_5q22.2	Del_18q21.2	1	1
Del_5q22.2	Del_18q22.1	1	1
Del_5q23.3	Del_8p23.2	1	1
Del_5q23.3	Del_8p22	1	1
Del_5q23.3	Del_15q11.2	1	1
Del_5q23.3	Del_15q15.2	1	1
Del_5q23.3	Del_15q21.1	1	1
Del_5q23.3	Del_17p12	1	1
Del_5q23.3	Del_17q24.3	1	1
Del_5q23.3	Del_18p11.31	1	1
Del_5q23.3	Del_18q12.2	1	1
Del_5q23.3	Del_18q21.2	1	1
Del_5q23.3	Del_18q22.1	1	1
Del_6p25.3	Del_6q26	1	1
Del_6q26	Del_8p22	1	1
Del_6q26	Del_10q23.31	1	1
Del_6q26	Del_10q25.2	1	1
Del_6q26	Del_15q15.2	1	1
Del_6q26	Del_17p12	1	1
Del_6q26	Del_18q12.2	1	1
Del_6q26	Del_18q21.2	1	1
Del_6q26	Del_18q22.1	1	1
Del_6q26	Del_21q21.1	1	1
Del_6q26	Del_22q13.32	1	1
Del_8p23.2	Del_8p22	1	1
Del_8p23.2	Del_8q11.1	1	1
Del_8p23.2	Del_15q11.2	1	1
Del_8p23.2	Del_15q15.2	1	1
Del_8p23.2	Del_15q21.1	1	1
Del_8p23.2	Del_15q22.33	1	1
Del_8p23.2	Del_17p12	1	1
Del_8p23.2	Del_18p11.31	1	1
Del_8p23.2	Del_18q12.2	1	1
Del_8p23.2	Del_18q21.2	1	1
Del_8p23.2	Del_18q22.1	1	1
Del_8p23.2	Del_19p13.3	1	1
Del_8p23.2	Del_22q13.32	1	1
Del_8p22	Del_8q11.1	1	1
Del_8p22	Del_10q23.31	1	1
Del_8p22	Del_14q11.2	1	1
Del_8p22	Del_15q11.2	1	1
Del_8p22	Del_15q15.2	1	1
Del_8p22	Del_15q21.1	1	1
Del_8p22	Del_15q22.33	1	1
Del_8p22	Del_17p12	1	1
Del_8p22	Del_18p11.31	1	1
Del_8p22	Del_18q12.2	1	1
Del_8p22	Del_18q21.2	1	1
Del_8p22	Del_18q22.1	1	1
Del_8p22	Del_19p13.3	1	1
Del_8p22	Del_22q13.32	1	1
Del_8q11.1	Del_15q11.2	1	1
Del_8q11.1	Del_15q15.2	1	1
Del_8q11.1	Del_15q21.1	1	1
Del_8q11.1	Del_15q22.33	1	1
Del_8q11.1	Del_17p12	1	1
Del_8q11.1	Del_18q12.2	1	1
Del_8q11.1	Del_18q21.2	1	1
Del_8q11.1	Del_18q22.1	1	1
Del_8q11.1	Del_21q11.2	1	1
Del_8q11.1	Del_21q21.1	1	1
Del_8q11.1	Del_22q13.32	1	1
Del_10q21.1	Del_10q23.31	1	1
Del_10q21.1	Del_10q25.2	1	1
Del_10q21.1	Del_15q15.2	1	1
Del_10q21.1	Del_15q21.1	1	1
Del_10q21.1	Del_18p11.31	1	1
Del_10q21.1	Del_18q12.2	1	1
Del_10q21.1	Del_18q21.2	1	1
Del_10q21.1	Del_18q22.1	1	1
Del_10q21.1	Del_22q13.32	1	1
Del_10q23.31	Del_10q25.2	1	1
Del_10q23.31	Del_15q11.2	1	1
Del_10q23.31	Del_15q15.2	1	1
Del_10q23.31	Del_15q21.1	1	1
Del_10q23.31	Del_15q22.33	1	1
Del_10q23.31	Del_17p12	1	1
Del_10q23.31	Del_18p11.31	1	1
Del_10q23.31	Del_18q12.2	1	1
Del_10q23.31	Del_18q21.2	1	1
Del_10q23.31	Del_18q22.1	1	1
Del_10q23.31	Del_22q13.32	1	1
Del_10q25.2	Del_15q11.2	1	1
Del_10q25.2	Del_15q15.2	1	1
Del_10q25.2	Del_15q21.1	1	1
Del_10q25.2	Del_15q22.33	1	1
Del_10q25.2	Del_18q12.2	1	1
Del_10q25.2	Del_18q21.2	1	1
Del_10q25.2	Del_18q22.1	1	1
Del_10q25.2	Del_22q13.32	1	1
Del_12p13.1	Del_14q11.2	1	1
Del_12p13.1	Del_17p12	1	1
Del_12p13.1	Del_18p11.31	1	1
Del_12p13.1	Del_18q12.2	1	1
Del_12p13.1	Del_18q21.2	1	1
Del_12p13.1	Del_18q22.1	1	1
Del_14q11.2	Del_15q11.2	1	1
Del_14q11.2	Del_15q15.2	1	1
Del_14q11.2	Del_15q21.1	1	1
Del_14q11.2	Del_15q22.33	1	1
Del_14q11.2	Del_17p12	1	1
Del_14q11.2	Del_18p11.31	1	1
Del_14q11.2	Del_18q12.2	1	1
Del_14q11.2	Del_18q21.2	1	1
Del_14q11.2	Del_18q22.1	1	1
Del_14q11.2	Del_22q13.32	1	1
Del_15q11.2	Del_15q15.2	1	1
Del_15q11.2	Del_15q21.1	1	1
Del_15q11.2	Del_15q22.33	1	1
Del_15q11.2	Del_17p12	1	1
Del_15q11.2	Del_17q24.3	1	1
Del_15q11.2	Del_18p11.31	1	1
Del_15q11.2	Del_18q12.2	1	1
Del_15q11.2	Del_18q21.2	1	1
Del_15q11.2	Del_18q22.1	1	1
Del_15q11.2	Del_21q21.1	1	1
Del_15q11.2	Del_22q13.32	1	1
Del_15q15.2	Del_15q21.1	1	1
Del_15q15.2	Del_15q22.33	1	1
Del_15q15.2	Del_17p12	1	1
Del_15q15.2	Del_18p11.31	1	1
Del_15q15.2	Del_18q12.2	1	1
Del_15q15.2	Del_18q21.2	1	1
Del_15q15.2	Del_18q22.1	1	1
Del_15q15.2	Del_21q21.1	1	1
Del_15q15.2	Del_22q13.32	1	1
Del_15q21.1	Del_15q22.33	1	1
Del_15q21.1	Del_17p12	1	1
Del_15q21.1	Del_18p11.31	1	1
Del_15q21.1	Del_18q12.2	1	1
Del_15q21.1	Del_18q21.2	1	1
Del_15q21.1	Del_18q22.1	1	1
Del_15q21.1	Del_22q13.32	1	1
Del_15q22.33	Del_17p12	1	1
Del_15q22.33	Del_18p11.31	1	1
Del_15q22.33	Del_18q12.2	1	1
Del_15q22.33	Del_18q21.2	1	1
Del_15q22.33	Del_18q22.1	1	1
Del_15q22.33	Del_21q21.1	1	1
Del_15q22.33	Del_22q13.32	1	1
Del_17p12	Del_17q24.3	1	1
Del_17p12	Del_18p11.31	1	1
Del_17p12	Del_18q12.2	1	1
Del_17p12	Del_18q21.2	1	1
Del_17p12	Del_18q22.1	1	1
Del_17p12	Del_19p13.3	1	1
Del_17p12	Del_21q11.2	1	1
Del_17p12	Del_21q21.1	1	1
Del_17p12	Del_22q13.32	1	1
Del_17q24.3	Del_18q12.2	1	1
Del_17q24.3	Del_18q21.2	1	1
Del_17q24.3	Del_18q22.1	1	1
Del_17q24.3	Del_19p13.3	1	1
Del_17q24.3	Del_22q13.32	1	1
Del_18p11.31	Del_18q12.2	1	1
Del_18p11.31	Del_18q21.2	1	1
Del_18p11.31	Del_18q22.1	1	1
Del_18p11.31	Del_21q11.2	1	1
Del_18p11.31	Del_21q21.1	1	1
Del_18p11.31	Del_22q13.32	1	1
Del_18q12.2	Del_18q21.2	1	1
Del_18q12.2	Del_18q22.1	1	1
Del_18q12.2	Del_19p13.3	1	1
Del_18q12.2	Del_21q11.2	1	1
Del_18q12.2	Del_21q21.1	1	1
Del_18q12.2	Del_22q13.32	1	1
Del_18q21.2	Del_18q22.1	1	1
Del_18q21.2	Del_19p13.3	1	1
Del_18q21.2	Del_21q11.2	1	1
Del_18q21.2	Del_21q21.1	1	1
Del_18q21.2	Del_22q13.32	1	1
Del_18q22.1	Del_19p13.3	1	1
Del_18q22.1	Del_21q11.2	1	1
Del_18q22.1	Del_21q21.1	1	1
Del_18q22.1	Del_22q13.32	1	1
Del_19p13.3	Del_22q13.32	1	1
Del_21q11.2	Del_21q21.1	1	1
Del_21q11.2	Del_22q13.32	1	1
Del_21q21.1	Del_22q13.32	1	1
SETD2	Amp_20q12	1.03e-07	1
BMPR2	13q-Amp	1.15e-05	1
CREBBP	Del_18q12.2	1.16e-05	1
CREBBP	Del_17p12	1.18e-07	1
BCOR	Amp_20q11.21	1.19e-05	1
BMPR2	Amp_20q12	1.23e-07	1
8p-Amp	8p-Del	1.25e-05	1
FBXW7	13q-Amp	1.26e-07	1
CREBBP	Del_18q21.2	1.27e-05	1
FBXW7	Amp_13q12.2	1.29e-07	1
HLA-A	Amp_20q12	1.35e-07	1
LARP4B	Amp_20q13.12	1.39e-05	1
ATM	20q-Amp	1.45e-05	1
RNF43	Amp_20q11.21	1.47e-11	1
MGA	Del_8p22	1.54e-05	1
FKBP9	Amp_20q11.21	1.55e-05	1
CREBBP	Amp_13q12.13	1.56e-05	1
BMPR2	Del_18q21.2	1.59e-07	1
BMPR2	Amp_13q22.1	1.62e-06	1
DDX26B	Del_18q21.2	1.66e-05	1
ZBTB20	Amp_20q12	1.69e-06	1
FBXW7	Amp_13q12.13	1.74e-06	1
BMPR2	18q-Del	1.78e-08	1
B2M	Amp_20q13.12	1.79e-06	1
FKBP9	20q-Amp	1.7e-06	1
BMPR2	Amp_13q12.2	1.81e-06	1
PRKDC	20p-Amp	1.82e-05	1
RNF43	17p-Del	1.82e-07	1
ARID1A	Amp_20q12	1.86e-05	1
ATM	Amp_20q13.12	1.89e-05	1
ATM	Amp_20q12	1.94e-05	1
ATM	Amp_20q11.21	1.95e-05	1
SLC12A6	Amp_20q12	1.99e-05	1
SETD2	20q-Amp	1e-07	1
DDX26B	Del_18q22.1	2.02e-05	1
RNF43	Del_18p11.31	2.04e-08	1
LARP4B	Amp_13q22.1	2.06e-05	1
RNF43	18q-Del	2.15e-10	1
MGA	Del_18q12.2	2.17e-05	1
BMPR2	Amp_20p11.21	2.17e-05	1
SETD2	Amp_20q13.12	2.24e-08	1
MGA	20q-Amp	2.28e-06	1
MGA	18p-Del	2.2e-05	1
HLA-A	Amp_20q11.21	2.31e-07	1
BMPR2	Del_18q22.1	2.33e-07	1
ALPK2	Del_18q12.2	2.3e-05	1
20p-Amp	20p-Del	2.48e-07	1
BMPR2	18p-Del	2.54e-06	1
ALPK2	Amp_20q12	2.67e-05	1
SETD2	Amp_20q11.21	2.68e-07	1
CREBBP	Amp_20q13.12	2.6e-05	1
CREBBP	Amp_13q22.1	2.72e-06	1
RNF43	Del_8p22	2.75e-06	1
FBXW7	Amp_13q22.1	2.81e-08	1
ALPK2	20q-Amp	2.88e-05	1
LARP4B	Del_18q21.2	2.88e-05	1
MVK	Amp_20q13.12	2.97e-05	1
ZBTB20	Amp_20q11.21	2.98e-06	1
RNF43	Amp_13q22.1	3.01e-07	1
MGA	Amp_20q11.21	3.03e-08	1
ALPK2	Amp_20q13.12	3.12e-05	1
RNF43	Amp_13q12.2	3.1e-09	1
CREBBP	Amp_13q12.2	3.22e-06	1
CREBBP	Amp_20q11.21	3.24e-05	1
BMPR2	Amp_20q13.12	3.33e-08	1
ALPK2	Del_18q21.2	3.34e-06	1
GPATCH8	Del_18q21.2	3.35e-05	1
MGA	Del_18q21.2	3.39e-06	1
BMPR2	Amp_20q11.21	3.41e-08	1
BCORL1	Amp_20q11.21	3.54e-05	1
SLC12A6	Amp_20q11.21	3.54e-05	1
SOX9	Del_8p22	3.56e-05	1
HLA-A	20q-Amp	3.57e-07	1
MGA	Amp_20p11.21	3.59e-06	1
LARP4B	Amp_20q12	3.61e-05	1
RNF43	Amp_20p11.21	3.63e-06	1
CREBBP	Del_8p23.2	3.65e-05	1
CREBBP	Amp_20q12	3.74e-05	1
B2M	Amp_20q12	3.82e-06	1
LARP4B	Del_18q22.1	3.83e-05	1
GPATCH8	Del_18q22.1	4.04e-05	1
LARP4B	18q-Del	4.05e-05	1
RNF43	20q-Amp	4.06e-11	1
RNF43	Amp_20q12	4.14e-12	1
FKBP9	Amp_20q13.12	4.31e-06	1
MGA	20p-Amp	4.34e-05	1
FBXW7	Amp_20q13.12	4.35e-05	1
ATM	Amp_20p12.1	4.44e-05	1
DDX26B	Del_18q12.2	4.4e-05	1
BMPR2	Del_17p12	4.4e-06	1
MGA	Amp_20q12	4.61e-07	1
RNF43	13q-Amp	4.63e-07	1
CREBBP	18q-Del	4.65e-05	1
CREBBP	13q-Amp	4.68e-05	1
ZBTB20	20q-Amp	4.69e-06	1
RNF43	Del_18q21.2	4.73e-11	1
RNF43	Del_18q22.1	4.74e-12	1
MGA	Del_18q22.1	4.98e-06	1
ALPK2	Del_18q22.1	4.98e-06	1
MAPK6	Del_18q21.2	4e-04	1
FKBP9	Del_18q21.2	4e-04	1
ALDH1A3	Del_18q21.2	4e-04	1
RNF43	18p-Del	5.01e-09	1
PTCH1	18q-Del	5.14e-05	1
BCORL1	Amp_20q13.12	5.14e-05	1
MVK	Amp_20q12	5.45e-05	1
BMPR2	20q-Amp	5.46e-07	1
ARID1A	Amp_20q11.21	5.59e-05	1
SLC12A6	20q-Amp	5.6e-05	1
CREBBP	17p-Del	5.73e-05	1
ALPK2	Amp_20q11.21	5.78e-05	1
NLRC4	Del_18q22.1	5.78e-05	1
HLA-A	Amp_20q13.12	5.84e-08	1
ATM	Del_17p12	6.06e-05	1
MGA	18q-Del	6.09e-05	1
DDX26B	Amp_20q13.12	6.16e-05	1
RNF43	Del_17p12	6.19e-10	1
MGA	Del_18p11.31	6.1e-05	1
B2M	Amp_20q11.21	6.21e-06	1
PTCH1	Del_18q21.2	6.41e-05	1
PTCH1	Del_18q12.2	6.43e-05	1
MGA	Amp_20q13.12	6.43e-07	1
LARP4B	Amp_20q11.21	6.58e-05	1
MAPK6	Del_17p12	6.59e-05	1
CREBBP	Del_18q22.1	6.5e-05	1
RNF43	Amp_20q13.12	6.66e-12	1
ALPK2	18q-Del	6.71e-05	1
MVK	Del_18q21.2	6.75e-05	1
BMPR2	Del_18p11.31	6.78e-06	1
ZBTB20	Amp_20q13.12	6.97e-07	1
CREBBP	20q-Amp	7.12e-05	1
BCOR	Amp_20q13.12	7.32e-05	1
C11orf30	20q-Amp	7.51e-05	1
ATM	20p-Amp	7.58e-06	1
BMPR2	Amp_13q12.13	7.59e-06	1
DDX26B	18q-Del	7.68e-05	1
RNF43	Del_18q12.2	7.68e-09	1
ARID1A	Amp_20q13.12	7.6e-05	1
MVK	Amp_20q11.21	8.03e-05	1
MVK	Del_18q22.1	8.04e-05	1
MPHOSPH10	18p-Del	8.06e-05	1
SLC12A6	Amp_20q13.12	8.07e-06	1
GPATCH8	Del_18q12.2	8.35e-05	1
RNF43	Del_15q11.2	8.4e-05	1
ALDH1A3	Del_18p11.31	8.59e-05	1
C11orf30	Amp_20q13.12	8.72e-05	1
RNF43	20p-Amp	8.86e-06	1
RNF43	Del_8p23.2	8.86e-06	1
CREBBP	Del_8p22	9.05e-06	1
LARP4B	Amp_13q12.13	9.11e-05	1
ACVR1B	Del_18q21.2	9.14e-05	1
BMPR2	Del_18q12.2	9.17e-08	1
B2M	20q-Amp	9.18e-06	1
SOX9	Del_8p23.2	9.39e-05	1
FKBP9	Amp_20q12	9.42e-06	1
MPHOSPH10	Del_18q22.1	9.63e-05	1
RNF43	Amp_13q12.13	9.87e-10	1
