gene1	gene2	pval	qval
FMN2	CTNNB1	0.000101	1
OR4D10	RBBP7	0.000101	1
14q-Del	Del_4q22.1	0.000101	1
20q-Amp	Del_1p36.11	0.000102	1
NF1	C2orf29	0.000103	1
20p-Amp	8q-Amp	0.000104	1
NF2	PRKDC	0.000105	1
NF1	PLAGL2	0.000107	1
Del_4q22.1	Del_18p11.31	0.000107	1
Del_10q23.31	Del_15q21.1	0.000107	1
GGT1	Amp_13q12.2	0.000108	1
C11orf30	FKBP9	0.000108	1
ROS1	L1TD1	0.000108	1
SLC26A8	SETD2	0.000108	1
4p-Del	Del_3p26.3	0.000108	1
ROS1	PTGDR	0.000109	1
18p-Del	Del_1p33	0.000109	1
4q-Del	Amp_13q22.1	0.000109	1
5q-Del	Del_18q21.2	0.000109	1
OR4D10	ROS1	0.00011	1
TOP2B	BMPR2	0.00011	1
Amp_17q12	Amp_20q12	0.000111	1
BCOR	ZBTB20	0.000112	1
SETD2	CREBBP	0.000112	1
Del_1p36.11	Del_8p22	0.000112	1
GGT1	Amp_13q22.1	0.000113	1
14q-Del	4p-Del	0.000113	1
Del_4q35.1	Del_8q11.1	0.000113	1
NF1	DIP2B	0.000114	1
PRRG1	NEXN	0.000115	1
CDK12	CREBBP	0.000115	1
Del_5q21.2	Del_15q11.2	0.000116	1
8p-Del	Del_18p11.31	0.000117	1
Del_17p12	Del_21q21.1	0.000117	1
MGA	NEXN	0.000118	1
DIP2B	BIRC3	0.000118	1
18p-Del	Del_10q23.31	0.000119	1
Amp_13q12.13	Amp_20p12.1	0.000119	1
8p-Del	Amp_20q11.21	0.000121	1
Amp_13q12.2	Amp_20p12.1	0.000124	1
17p-Del	Del_5q12.1	0.000126	1
Del_14q11.2	Del_22q13.32	0.000127	1
MAPK6	ALPK2	0.000128	1
P2RY13	FKBP9	0.000128	1
ALPK2	C2orf29	0.000128	1
ALPK2	SLC26A8	0.000128	1
ALPK2	FKBP9	0.000128	1
7p-Amp	Del_18q21.2	0.000128	1
22q-Del	Amp_13q12.2	0.000129	1
Amp_13q12.2	Del_4p16.1	0.000129	1
Del_18q12.2	Del_19p13.3	0.000129	1
RNF43	WNT1	0.00013	1
P2RY13	RB1	0.00013	1
Del_6q26	Del_22q13.32	0.00013	1
Del_19p13.3	Del_22q13.32	0.00013	1
20q-Amp	8p-Del	0.000131	1
21q-Del	Del_1p36.11	0.000131	1
Amp_13q12.13	Del_15q15.2	0.000132	1
CDH1	BCOR	0.000135	1
18p-Del	Del_5q12.1	0.000135	1
Del_5q12.1	Del_8p23.2	0.000139	1
ARID1A	PTEN	0.00014	1
13q-Amp	16p-Amp	0.00014	1
FMN2	NF1	0.000141	1
SLC26A8	TOP2B	0.000141	1
TOP2B	FKBP9	0.000141	1
7p-Amp	17p-Del	0.000142	1
NF2	ZBTB20	0.000143	1
Amp_17q12	Del_17p12	0.000144	1
PTCH1	CDK12	0.000145	1
4p-Del	Amp_13q12.13	0.000145	1
8p-Del	Del_4p16.1	0.000146	1
Del_10q21.1	Del_18q22.1	0.000147	1
20p-Del	Del_1p36.11	0.00015	1
RNF43	SLC26A8	0.000151	1
RNF43	FKBP9	0.000151	1
RNF43	ALDH1A3	0.000151	1
4p-Del	8p-Del	0.000151	1
Del_1p13.2	Del_4q35.1	0.000151	1
ALPK2	CREBBP	0.000153	1
ALG12	PRPS1	0.000153	1
4p-Del	Del_5q21.2	0.000153	1
GGT1	Amp_13q12.13	0.000154	1
7p-Amp	18p-Del	0.000154	1
TP53	Amp_8q24.21	0.000155	1
PTEN	BMPR2	0.000155	1
Del_4q22.1	Del_5q21.2	0.000155	1
MAPK6	BMPR2	0.000156	1
MGA	NLRC4	0.000156	1
MAPK6	CTNNB1	0.000157	1
20p-Del	Amp_20q11.21	0.000157	1
ARID1A	ALPK2	0.00016	1
Del_5q21.2	Del_15q15.2	0.00016	1
BCOR	ROS1	0.000161	1
Del_17p12	Del_21q11.2	0.000162	1
PRKDC	RBPJ	0.000164	1
PRKDC	HLA-A	0.000164	1
Del_4p16.1	Del_8q11.1	0.000164	1
Del_10q23.31	Del_18p11.31	0.000164	1
STARD3NL	ALPK2	0.000165	1
ALPK2	GPATCH8	0.000165	1
16p-Amp	18q-Del	0.000166	1
Del_5q23.3	Del_18p11.31	0.000166	1
L1TD1	BIRC3	0.000168	1
PLAGL2	LARP4B	0.000169	1
22q-Del	Del_8p22	0.000169	1
Amp_8p11.23	Amp_20p11.21	0.000171	1
CDK12	BIRC3	0.000174	1
B2M	ATM	0.000175	1
4p-Del	Del_5q23.3	0.000175	1
Del_1p36.11	Del_8p23.2	0.000176	1
12p-Amp	7p-Amp	0.000177	1
Del_1p36.11	Del_4p16.1	0.000177	1
NF1	MGA	0.000178	1
17p-Del	Del_21q11.2	0.000178	1
Amp_13q12.2	Del_15q21.1	0.000178	1
OR4D10	MAPK6	0.000182	1
MGA	SETD2	0.000184	1
12p-Amp	2q-Amp	0.000184	1
2p-Amp	Amp_11p15.5	0.000184	1
7q-Amp	Amp_8p11.23	0.000184	1
20p-Amp	Del_18q12.2	0.000187	1
FMN2	ATM	0.000188	1
PRRG1	BMPR2	0.000188	1
FBXW7	PTCH1	0.000189	1
BCL9	ST3GAL6	0.000189	1
ST3GAL6	NLRC4	0.000189	1
CRIPAK	SMAD4	0.00019	1
NLRC4	BCORL1	0.00019	1
BCORL1	SLC12A6	0.00019	1
Del_4p16.1	Del_10q21.1	0.00019	1
RNF43	GPATCH8	0.000191	1
7p-Amp	8p-Amp	0.000191	1
22q-Del	4p-Del	0.000192	1
PTCH1	ZNF486	0.000193	1
TOP2B	PTEN	0.000194	1
17p-Del	Del_5q22.2	0.000194	1
5q-Del	Del_19p13.3	0.000194	1
Del_5q21.2	Del_15q21.1	0.000194	1
Amp_17q12	Amp_19q12	0.000198	1
4p-Del	Del_17q24.3	0.000205	1
Del_4q35.1	Del_5q12.1	0.000207	1
Amp_13q12.2	Del_22q13.32	0.000209	1
PRKDC	ZBTB20	0.000212	1
Amp_13q12.13	Del_4q22.1	0.000212	1
C11orf30	DIP2B	0.000216	1
C11orf30	LARP4B	0.000216	1
Amp_13q12.2	Del_4q22.1	0.000218	1
MGA	ST3GAL6	0.000221	1
Amp_20q11.21	Del_21q11.2	0.000222	1
PTEN	SLC12A6	0.000224	1
PRKDC	ALPK2	0.000225	1
EGR1	PLAGL2	0.000227	1
Del_4q35.1	Del_17q24.3	0.000227	1
BCL9	FKBP9	0.000229	1
FKBP9	SLC12A6	0.000229	1
16q-Amp	18p-Del	0.000231	1
16q-Amp	Amp_20p11.21	0.000231	1
ALPK2	CTNNB1	0.000233	1
17q-Amp	7p-Amp	0.000233	1
4p-Del	5q-Del	0.000233	1
20p-Amp	Del_18q22.1	0.000234	1
4q-Del	Del_8q11.1	0.000234	1
1p-Del	21q-Del	0.000235	1
21q-Del	Del_4q35.1	0.000237	1
Del_4q35.1	Del_5q21.2	0.000237	1
ARID1A	CDK12	0.000243	1
BCOR	RB1	0.000243	1
20p-Amp	Del_18q21.2	0.000246	1
21q-Del	Del_17p12	0.000246	1
MGA	CREBBP	0.000249	1
RNF43	FMN2	0.00025	1
TP53	7p-Amp	0.000251	1
B2M	SLC26A8	0.000251	1
B2M	FKBP9	0.000251	1
CDH1	BMPR2	0.000251	1
SLC26A8	HLA-A	0.000251	1
FKBP9	HLA-A	0.000251	1
FKBP9	GMPS	0.000251	1
Del_10q23.31	Del_17p12	0.000253	1
TP53	Amp_20p11.21	0.000254	1
Del_15q11.2	Del_21q21.1	0.000255	1
17p-Del	Del_1p13.2	0.000258	1
Del_17q24.3	Del_18q22.1	0.000258	1
16q-Amp	Amp_20q11.21	0.00026	1
17p-Del	Del_10q25.2	0.00026	1
16q-Amp	Del_18q22.1	0.000261	1
8p-Del	Del_4q35.1	0.000261	1
Del_8p22	Del_14q11.2	0.000264	1
MGA	PTCH1	0.000265	1
NF1	SMAD4	0.000266	1
ALPK2	PIK3R1	0.000266	1
7p-Amp	Del_18p11.31	0.000266	1
20p-Del	Amp_20q12	0.000268	1
1p-Del	22q-Del	0.00027	1
STARD3NL	NF2	0.000271	1
NF2	GPATCH8	0.000271	1
SELPLG	PTEN	0.000273	1
ALPK2	NLRC4	0.000274	1
ALPK2	SLC12A6	0.000274	1
SLC12A6	CTNNB1	0.000274	1
7p-Amp	Del_17p12	0.000274	1
4p-Del	Del_10q21.1	0.000281	1
DDX26B	RB1	0.000285	1
Amp_8p11.21	Del_18q21.2	0.000285	1
NF1	NLRC4	0.000286	1
WNT1	ROS1	0.000287	1
4p-Del	Del_1p36.11	0.000287	1
2p-Amp	Amp_17q12	0.000289	1
2q-Amp	Amp_17q12	0.000289	1
PRKDC	MPHOSPH10	0.00029	1
NF2	BMPR2	0.000291	1
21q-Del	Del_15q22.33	0.000291	1
IFT57	BCORL1	0.000295	1
IFT57	SLC12A6	0.000295	1
Amp_17q12	Amp_20q13.12	0.000295	1
16q-Amp	Amp_13q22.1	0.000296	1
BMPR2	GPATCH8	0.000297	1
FAM123B	PIK3R1	0.000298	1
14q-Del	Del_1p33	0.000298	1
Del_8q11.1	Del_18q12.2	0.000299	1
5q-Del	Del_8p23.2	0.000301	1
ZFP36L2	FAM9A	0.000303	1
PRRG1	PTEN	0.000304	1
ERBB2	PTEN	0.000306	1
Amp_17q24.1	Del_18p11.31	0.000306	1
MLH1	NF2	0.000308	1
17p-Del	20p-Del	0.000308	1
Del_1p36.11	Del_4q22.1	0.000308	1
22q-Del	Del_4q35.1	0.000309	1
2p-Amp	8q-Amp	0.00031	1
2q-Amp	8q-Amp	0.00031	1
16q-Amp	Del_18q21.2	0.000311	1
ALPK2	CDK12	0.000312	1
Del_1p36.11	Del_10q21.1	0.000312	1
22q-Del	Amp_13q12.13	0.000313	1
4q-Del	Del_21q11.2	0.000313	1
Amp_13q12.13	Del_4p16.1	0.000313	1
BCL9	L1TD1	0.000315	1
BCL9	NEXN	0.000315	1
Amp_20q11.21	Del_21q21.1	0.000316	1
PLAGL2	BMPR2	0.000318	1
20p-Amp	7q-Amp	0.000319	1
Del_4q22.1	Del_5q22.2	0.000323	1
18p-Del	Del_12p13.1	0.000324	1
RNF43	NLRC4	0.000327	1
RBBP7	NEXN	0.000328	1
L1TD1	GMPS	0.000328	1
RNF43	RB1	0.000334	1
Amp_8q24.21	Amp_12p13.33	0.000334	1
FBXW7	LARP4B	0.000335	1
Amp_13q22.1	Amp_20p12.1	0.000337	1
ARID1A	SLC26A8	0.000338	1
Del_1p33	Del_21q21.1	0.000338	1
P2RY13	C11orf30	0.000345	1
C11orf30	GPATCH8	0.000345	1
Amp_13q12.2	Del_15q22.33	0.000346	1
RNF43	MAP4K3	0.000348	1
Del_4q35.1	Del_7q31.1	0.00035	1
RB1	FKBP9	0.000353	1
C2orf29	KDM6A	0.000357	1
2p-Amp	8p-Amp	0.000357	1
2q-Amp	8p-Amp	0.000357	1
14q-Del	8p-Del	0.000358	1
16q-Amp	Amp_20q12	0.00036	1
Del_1p36.11	Del_8q11.1	0.00036	1
BCORL1	ATM	0.000361	1
SLC12A6	ATM	0.000361	1
Amp_20q13.12	Del_15q21.1	0.000362	1
PRKDC	NLRC4	0.000364	1
PRKDC	BCORL1	0.000364	1
16p-Amp	Amp_20p11.21	0.000368	1
PLEKHF2	CTNNB1	0.00037	1
RNF43	EGR1	0.000371	1
RBPJ	SETD2	0.000371	1
4p-Del	Del_21q21.1	0.000371	1
IFT57	FYN	0.000372	1
14q-Del	Del_1p13.2	0.000372	1
Del_6q26	Del_21q21.1	0.000373	1
NF2	SETD2	0.000374	1
MGA	C11orf30	0.000374	1
Del_15q22.33	Del_21q21.1	0.000374	1
PRKDC	GPATCH8	0.000375	1
PRKDC	BIRC3	0.000375	1
2p-Amp	Amp_8p11.23	0.000375	1
2q-Amp	Amp_8p11.23	0.000375	1
WNT1	LARP4B	0.000378	1
ALG12	LARP4B	0.000378	1
13q-Amp	Del_15q11.2	0.000379	1
MLH1	CREBBP	0.00038	1
MGA	IQCD	0.000382	1
MAPK6	CREBBP	0.000384	1
EGR1	LARP4B	0.000389	1
NF1	SETD2	0.00039	1
Del_10q25.2	Del_18q12.2	0.000391	1
Del_5q12.1	Del_8p22	0.000393	1
ARID1A	BCL9	0.000394	1
ARID1A	SLC12A6	0.000394	1
Del_1p33	Del_15q11.2	0.000398	1
18p-Del	Del_19p13.3	0.000403	1
PTCH1	KDM6A	0.000405	1
RB1	KDM6A	0.000405	1
12p-Amp	Amp_1q31.1	0.000409	1
Amp_13q22.1	Amp_17q12	0.00041	1
Del_5q23.3	Del_15q11.2	0.000418	1
B2M	MAP4K3	0.000421	1
BCL9	ZBTB20	0.000425	1
BCL9	MAP4K3	0.000425	1
NF1	RSPH3	0.000426	1
Del_4p16.1	Del_16p13.3	0.000426	1
MLH1	ATM	0.000427	1
B2M	ASXL1	0.000429	1
ALPK2	RBBP7	0.000429	1
ALPK2	GMPS	0.000429	1
5q-Del	Del_4q22.1	0.000431	1
Del_3q26.31	Del_4q22.1	0.000431	1
MGA	PTGDR	0.000434	1
22q-Del	Amp_13q22.1	0.000436	1
4q-Del	Del_19p13.3	0.00044	1
Del_1p13.2	Del_6q26	0.00044	1
14q-Del	Del_12p13.1	0.000441	1
DDX26B	ATM	0.000442	1
ST3GAL6	RBBP7	0.000445	1
PLEKHF2	HLA-A	0.000445	1
PRRG1	RB1	0.000445	1
EGR1	PRKDC	0.000447	1
16p-Amp	Amp_13q12.2	0.000447	1
MAPK6	ALDH1A3	0.000449	1
TOP2B	CDK12	0.000452	1
8p-Del	Del_22q13.32	0.000455	1
17p-Del	21q-Del	0.00046	1
17q-Amp	Del_17p12	0.000461	1
PLAGL2	GPATCH8	0.000463	1
RPTN	SMAD4	0.000465	1
STARD3NL	CTNNB1	0.000472	1
RNF43	SETD2	0.000473	1
PTCH1	ROS1	0.000473	1
ARID1A	LARP4B	0.000474	1
Del_3p26.3	Del_22q13.32	0.000474	1
FAM9A	FKBP9	0.000482	1
ARID1A	C11orf30	0.000486	1
20q-Amp	Amp_17q12	0.000487	1
ROS1	SLC26A8	0.000488	1
TOP2B	CTNNB1	0.000488	1
ALG12	CDK12	0.000491	1
RNF43	ZFP36L2	0.000495	1
RNF43	RBBP7	0.000495	1
22q-Del	Del_19p13.3	0.000501	1
Del_4p16.1	Del_19p13.3	0.000501	1
CDH1	NLRC4	0.000503	1
MLH1	MVK	0.000504	1
Del_1p36.11	Del_4q35.1	0.000504	1
18q-Del	Amp_8p11.21	0.000505	1
BCOR	NLRC4	0.000508	1
PRRG1	GPATCH8	0.00051	1
RLIM	CTNNB1	0.000516	1
ZBTB20	CTNNB1	0.000517	1
WNT1	FMN2	0.000519	1
MGA	TOP2B	0.000524	1
C11orf30	SETD2	0.000524	1
Del_5q12.1	Del_19p13.3	0.000524	1
16q-Amp	Amp_5p12	0.000526	1
DIP2B	FKBP9	0.000536	1
SLC26A8	LARP4B	0.000536	1
ALDH1A3	LARP4B	0.000536	1
PRKDC	CHUK	0.000538	1
PIK3R1	BCORL1	0.000542	1
ROS1	DCLK2	0.000542	1
BCOR	MGA	0.000543	1
MGA	LARP4B	0.000543	1
PTCH1	SETD2	0.000551	1
RB1	SETD2	0.000551	1
Del_10q21.1	Del_18p11.31	0.000555	1
NF1	ALPK2	0.000561	1
ARID1A	PIK3R1	0.000563	1
IQCD	ALPK2	0.000564	1
ALPK2	IFT57	0.000564	1
MPHOSPH10	SETD2	0.000565	1
Amp_8p11.23	Del_8p23.2	0.000565	1
PLAGL2	DDX26B	0.000568	1
20p-Del	Del_18p11.31	0.00057	1
PTCH1	HLA-A	0.000571	1
20p-Del	Amp_20q13.12	0.000578	1
16q-Amp	Amp_20q13.12	0.000579	1
ARID1A	L1TD1	0.00058	1
16q-Amp	7p-Amp	0.00058	1
Del_1p13.2	Del_15q11.2	0.00058	1
Del_8q11.1	Del_21q21.1	0.000581	1
MAPK6	NEXN	0.000584	1
ATXN3L	FKBP9	0.000584	1
L1TD1	ALDH1A3	0.000584	1
Del_3p26.3	Del_18q22.1	0.000593	1
Amp_20q13.12	Del_21q11.2	0.000598	1
DIP2B	IFT57	0.000604	1
MLH1	SMAD4	0.000605	1
NF1	FKBP9	0.000614	1
CHUK	ASXL1	0.000615	1
MGA	FKBP9	0.000619	1
16p-Amp	Del_18q22.1	0.000623	1
Amp_13q22.1	Del_22q13.32	0.000625	1
17p-Del	Del_10q23.31	0.000629	1
8q-Amp	5q-Del	0.000632	1
FYN	SLC12A6	0.000639	1
BCORL1	GPATCH8	0.000639	1
WNT1	MVK	0.000641	1
Del_4q22.1	Del_8q11.1	0.00065	1
6p-Amp	7q-Amp	0.000653	1
PIK3R1	CDK12	0.000654	1
RBPJ	BMPR2	0.000658	1
HLA-A	BMPR2	0.000658	1
BMPR2	GMPS	0.000658	1
PRPS1	ATM	0.000658	1
CHUK	HLA-A	0.000667	1
Amp_20q12	Del_21q21.1	0.000667	1
13q-Amp	Amp_20p12.1	0.000672	1
BCL9	PTCH1	0.000673	1
PTCH1	BCORL1	0.000673	1
PTCH1	SLC12A6	0.000673	1
CHUK	RB1	0.000677	1
Amp_13q12.13	Del_12p13.1	0.000677	1
15q-Del	Amp_13q22.1	0.00068	1
CDH1	FMN2	0.000682	1
DCLK2	BIRC3	0.000683	1
PRKDC	PIK3R1	0.000686	1
Del_2p12	Del_8q11.1	0.000686	1
20q-Amp	Amp_11p15.5	0.000687	1
14q-Del	Del_3p26.3	0.000687	1
12p-Amp	Amp_8q24.21	0.000691	1
Del_6q26	Del_18q12.2	0.000695	1
FMN2	MVK	0.000696	1
16p-Amp	Amp_13q12.13	0.000696	1
Amp_20q13.12	Del_21q21.1	0.000706	1
ARID1A	PLAGL2	0.000709	1
CDH1	ATXN3L	0.000713	1
NF1	PRRG1	0.000713	1
18q-Del	Del_1p33	0.000728	1
Del_6q26	Del_8p22	0.000728	1
Del_8p22	Del_19p13.3	0.000728	1
L1TD1	LARP4B	0.000732	1
Del_4q35.1	Del_15q22.33	0.000733	1
PIK3R1	RBBP7	0.00074	1
SOX9	PCBP1	0.000741	1
MAPK6	FBXW7	0.000741	1
22q-Del	Del_5q23.3	0.000742	1
16p-Amp	Del_18q21.2	0.000743	1
ZBTB20	ALDH1A3	0.000747	1
RNF43	MPHOSPH10	0.00075	1
Del_3p14.2	Del_4q22.1	0.000756	1
L1TD1	NEXN	0.000758	1
20p-Amp	Amp_5p12	0.000758	1
ASXL1	ROS1	0.000759	1
Del_10q25.2	Del_15q11.2	0.000761	1
12p-Amp	Amp_2q33.1	0.000763	1
Amp_2q33.1	Amp_11p15.5	0.000763	1
TP53	RB1	0.000765	1
ALPK2	PTCH1	0.000775	1
ASXL1	RB1	0.000775	1
7p-Amp	Del_18q12.2	0.000775	1
18q-Del	Del_17q24.3	0.000775	1
SLC26A8	CDK12	0.000779	1
15q-Del	Del_4q35.1	0.000781	1
20q-Amp	Amp_5p12	0.000784	1
18q-Del	Amp_20p12.1	0.000786	1
21q-Del	Del_1p13.2	0.000788	1
Del_10q23.31	Del_15q11.2	0.00079	1
ARID1A	MGA	0.000795	1
21q-Del	22q-Del	0.000795	1
4p-Del	Del_5q22.2	0.000796	1
CDH1	PLAGL2	0.000797	1
CDH1	RPTN	0.000799	1
GGT1	13q-Amp	0.000799	1
14q-Del	Del_4p16.1	0.000808	1
NF2	RPTN	0.000809	1
NF2	RBBP7	0.000809	1
MGA	TPRKB	0.000811	1
Amp_8p11.21	Amp_13q22.1	0.000812	1
Del_5q12.1	Del_18q12.2	0.000814	1
Amp_13q22.1	Del_15q15.2	0.000815	1
Del_10q21.1	Del_18q21.2	0.000818	1
PLAGL2	MPHOSPH10	0.000819	1
12q-Amp	2p-Amp	0.000824	1
RBBP7	TOP2B	0.000825	1
17p-Del	Del_8q11.1	0.000825	1
Amp_8p11.21	Del_18q22.1	0.000829	1
Del_12p13.1	Del_18p11.31	0.000829	1
ST3GAL6	BMPR2	0.000831	1
Del_1p33	Del_17p12	0.000848	1
Del_5q12.1	Del_18q22.1	0.000848	1
12p-Amp	16q-Amp	0.00085	1
TP53	Amp_13q22.1	0.000854	1
PIK3R1	CTNNB1	0.000856	1
8p-Amp	Amp_20p12.1	0.000859	1
MVK	RBPJ	0.00086	1
PRRG1	RBPJ	0.00086	1
Del_1p33	Del_15q21.1	0.00086	1
ST3GAL6	L1TD1	0.000869	1
CHUK	ATM	0.000879	1
12q-Amp	Amp_2q33.1	0.000884	1
ATXN3L	MGA	0.000889	1
Amp_13q12.13	Del_15q22.33	0.00089	1
P2RY13	DDX26B	0.000894	1
NR1H3	DDX26B	0.000894	1
C11orf30	MPHOSPH10	0.000894	1
DDX26B	GPATCH8	0.000894	1
1p-Del	Del_3p26.3	0.000894	1
17q-Amp	20q-Amp	0.000895	1
DDX26B	SLC12A6	0.000896	1
FAM9A	ATM	0.000898	1
PRRG1	LARP4B	0.000898	1
MGA	RB1	0.000901	1
Del_1p33	Del_8q11.1	0.000905	1
OR4D10	CTNNB1	0.000906	1
Del_5q22.2	Del_18p11.31	0.000907	1
Del_15q15.2	Del_21q21.1	0.000907	1
PIK3R1	RB1	0.00091	1
15q-Del	Del_5q23.3	0.000911	1
SELPLG	CTNNB1	0.000915	1
MVK	ALPK2	0.000916	1
STARD3NL	PTCH1	0.000919	1
RB1	FYN	0.000919	1
ACVR1B	NR1H3	0.000921	1
Del_10q21.1	Del_18q12.2	0.000924	1
Amp_5p12	Amp_20p11.21	0.000925	1
TOP2B	SLC12A6	0.000943	1
20q-Amp	Del_15q21.1	0.000945	1
CDK12	ATM	0.000948	1
ARID1A	ZBTB20	0.000951	1
ASXL1	SLC26A8	0.000958	1
FAM123B	ROS1	0.000963	1
MAP4K3	ATM	0.000963	1
L1TD1	MAP4K3	0.000968	1
MAP4K3	NEXN	0.000968	1
17q-Amp	Amp_2q33.1	0.000968	1
MGA	BCL9	0.00097	1
STARD3NL	MGA	0.000971	1
MGA	DCLK2	0.000971	1
ZBTB20	DIP2B	0.00098	1
ZBTB20	LARP4B	0.00098	1
RB1	LARP4B	0.000998	1
Del_8q11.1	Del_22q13.32	0.000999	1
Del_4q35.1	Del_10q23.31	0.001	1
STARD3NL	PTEN	0.00101	1
TPRKB	PTEN	0.00101	1
16p-Amp	Amp_5p12	0.00101	1
16q-Amp	Del_18p11.31	0.00101	1
TPRKB	RB1	0.00102	1
18q-Del	Del_5q12.1	0.00102	1
5q-Del	Amp_8p11.21	0.00102	1
Del_4q22.1	Del_12p13.1	0.00102	1
APC	Amp_13q12.2	0.00103	1
CDH1	FBXW7	0.00103	1
PLAGL2	ATM	0.00103	1
C2orf29	ATM	0.00103	1
ALDH1A3	ATM	0.00103	1
RNF43	PLAGL2	0.00104	1
Amp_16p11.2	Amp_20p11.21	0.00104	1
Del_1p36.11	Del_16p13.3	0.00104	1
NF2	DIP2B	0.00105	1
NF2	LARP4B	0.00105	1
9p-Amp	Amp_10q22.3	0.00105	1
ST3GAL6	MAP4K3	0.00106	1
PTCH1	MPHOSPH10	0.00106	1
L1TD1	CDK12	0.00106	1
Amp_8p11.21	Amp_13q12.13	0.00106	1
Del_3p14.2	Del_4q35.1	0.00106	1
PTEN	CDK12	0.00107	1
13q-Amp	22q-Del	0.00107	1
Amp_13q12.2	Del_1p13.2	0.00107	1
7q-Amp	Del_18q22.1	0.00108	1
ARID1A	CTNNB1	0.00109	1
DCLK2	ATM	0.00109	1
BIRC3	ATM	0.00109	1
7q-Amp	Amp_16p11.2	0.00109	1
Amp_8p11.21	Del_18q12.2	0.00109	1
Amp_11p15.5	Amp_20q11.21	0.0011	1
Del_5q22.2	Del_15q11.2	0.0011	1
NF1	NEXN	0.00111	1
DIP2B	ATM	0.00111	1
PIK3R1	MPHOSPH10	0.00112	1
ARID1A	PRKDC	0.00113	1
NF1	BMPR2	0.00113	1
ROS1	PTEN	0.00113	1
Amp_2q33.1	Del_2p12	0.00113	1
Del_5q12.1	Del_18q21.2	0.00113	1
B2M	BIRC3	0.00115	1
NF2	PRRG1	0.00115	1
P2RY13	HLA-A	0.00115	1
P2RY13	GMPS	0.00115	1
ROS1	BCORL1	0.00115	1
ROS1	SLC12A6	0.00115	1
RBBP7	FYN	0.00115	1
WNT1	HLA-A	0.00117	1
16p-Amp	Amp_20q11.21	0.00117	1
Del_1p13.2	Del_21q11.2	0.00117	1
Del_10q23.31	Del_15q22.33	0.00117	1
MAPK6	C11orf30	0.00118	1
CHUK	SLC26A8	0.00118	1
CHUK	ALDH1A3	0.00118	1
15q-Del	Del_1p13.2	0.00118	1
Del_3p26.3	Del_16p13.3	0.00118	1
NF2	NLRC4	0.00119	1
Amp_13q22.1	Del_4p16.1	0.00119	1
NF1	CHUK	0.0012	1
18p-Del	Del_10q21.1	0.00121	1
FMN2	KDM6A	0.00122	1
BCL9	HLA-A	0.00122	1
NLRC4	RBBP7	0.00122	1
NLRC4	GMPS	0.00122	1
RBBP7	SLC12A6	0.00122	1
17q-Amp	Amp_20q11.21	0.00122	1
Amp_13q12.13	Del_15q21.1	0.00122	1
Del_4q35.1	Del_10q25.2	0.00122	1
Del_8q11.1	Del_21q11.2	0.00122	1
ZBTB20	MAP4K3	0.00123	1
7q-Amp	Amp_17q12	0.00123	1
MGA	ZBTB20	0.00124	1
LARP4B	PRPS1	0.00124	1
16q-Amp	6p-Amp	0.00125	1
FAM123B	SETD2	0.00126	1
FMN2	PTCH1	0.00126	1
MVK	CREBBP	0.00126	1
Del_3p26.3	Del_18q12.2	0.00126	1
16p-Amp	Del_18p11.31	0.00127	1
18p-Del	20p-Del	0.00127	1
BMPR2	ZNF486	0.00128	1
ATM	KDM6A	0.00128	1
ARID1A	STARD3NL	0.00129	1
P2RY13	LARP4B	0.00129	1
DIP2B	FYN	0.00129	1
LARP4B	GPATCH8	0.00129	1
12q-Amp	7q-Amp	0.00129	1
1p-Del	Del_4q35.1	0.00129	1
21q-Del	Del_15q11.2	0.00129	1
Amp_12p13.33	Del_16p13.3	0.00129	1
SLC26A8	BMPR2	0.0013	1
FKBP9	BMPR2	0.0013	1
12p-Amp	Amp_8p11.23	0.0013	1
8p-Del	Del_10q23.31	0.0013	1
18p-Del	Del_10q25.2	0.00131	1
BCOR	DIP2B	0.00132	1
7p-Amp	18q-Del	0.00132	1
Amp_16p11.2	Amp_20q13.12	0.00132	1
SETD2	CDK12	0.00133	1
17p-Del	Del_10q21.1	0.00133	1
SOX9	FBXW7	0.00134	1
SETD2	SLC12A6	0.00134	1
Del_8p22	Del_10q23.31	0.00134	1
ARID1A	ST3GAL6	0.00135	1
MVK	SLC26A8	0.00135	1
PLEKHF2	SMAD4	0.00135	1
2q-Amp	Amp_12p13.33	0.00135	1
ROS1	GMPS	0.00136	1
7q-Amp	Del_8p22	0.00136	1
Amp_13q12.13	Del_22q13.32	0.00137	1
Del_4q22.1	Del_14q11.2	0.00137	1
7p-Amp	Amp_12p13.33	0.00138	1
Del_17q24.3	Del_22q13.32	0.00138	1
MGA	GRB2	0.00139	1
4q-Del	Del_21q21.1	0.00139	1
BMPR2	BCORL1	0.0014	1
Del_10q25.2	Del_15q22.33	0.00141	1
Del_15q11.2	Del_21q11.2	0.00141	1
P2RY13	ALPK2	0.00142	1
ALPK2	FYN	0.00142	1
ARID1A	SETD2	0.00143	1
22q-Del	8p-Del	0.00143	1
CHUK	SMAD4	0.00144	1
Amp_8p11.21	Amp_13q12.2	0.00144	1
STARD3NL	NF1	0.00145	1
MAPK6	TOP2B	0.00145	1
MPHOSPH10	GPATCH8	0.00145	1
Del_4q35.1	Del_10q21.1	0.00145	1
20q-Amp	Amp_19q12	0.00146	1
ARID1A	SOX9	0.00147	1
NF1	TPRKB	0.00148	1
7q-Amp	17p-Del	0.00148	1
7q-Amp	Amp_12p13.33	0.00148	1
FMN2	TOP2B	0.00149	1
ZBTB20	ZNF486	0.00149	1
B2M	DDX26B	0.0015	1
MLH1	LARP4B	0.0015	1
OR4D10	HLA-A	0.0015	1
NLRC4	SLC12A6	0.0015	1
DDX26B	HLA-A	0.0015	1
Del_10q21.1	Del_15q15.2	0.0015	1
TPRKB	KDM6A	0.00151	1
TP53	13q-Amp	0.00152	1
15q-Del	20p-Del	0.00152	1
Amp_6p21.1	Del_3q26.31	0.00152	1
Del_3p26.3	Del_3q26.31	0.00152	1
CDH1	STARD3NL	0.00153	1
CDH1	P2RY13	0.00153	1
20p-Amp	Amp_19q12	0.00153	1
Del_2q22.1	Del_4q35.1	0.00153	1
Amp_2q33.1	Amp_20p12.1	0.00154	1
Amp_19q12	Amp_20p12.1	0.00154	1
APC	PTCH1	0.00155	1
Amp_5p12	Amp_20p12.1	0.00155	1
CREBBP	CTNNB1	0.00156	1
17q-Amp	7q-Amp	0.00156	1
RNF43	L1TD1	0.00157	1
PRKDC	LARP4B	0.00157	1
BCL9	ALPK2	0.00157	1
ALPK2	BCORL1	0.00157	1
ASXL1	CDK12	0.00157	1
DIP2B	CTNNB1	0.00157	1
Del_4q35.1	Del_5q22.2	0.00158	1
Del_17q24.3	Del_18q12.2	0.00158	1
7p-Amp	Amp_16p11.2	0.00159	1
RNF43	NR1H3	0.0016	1
RNF43	FYN	0.0016	1
16p-Amp	Amp_20q12	0.00161	1
Amp_8q24.21	Amp_17q12	0.00161	1
Del_4q22.1	Del_16p13.3	0.00161	1
B2M	CTNNB1	0.00162	1
RPTN	CTNNB1	0.00162	1
PIK3R1	CREBBP	0.00162	1
Del_8q11.1	Del_17p12	0.00162	1
SELPLG	PIK3R1	0.00163	1
BCL9	RLIM	0.00163	1
PIK3R1	SLC26A8	0.00163	1
18q-Del	Del_6q26	0.00163	1
Amp_13q22.1	Del_4q22.1	0.00163	1
Amp_5p12	Amp_20q12	0.00165	1
ZBTB20	SETD2	0.00166	1
RSPH3	CREBBP	0.00166	1
20p-Del	22q-Del	0.00166	1
17q-Amp	Del_18p11.31	0.00167	1
Del_10q21.1	Del_15q21.1	0.00169	1
Del_8p23.2	Del_10q23.31	0.0017	1
FAM9A	BCL9	0.00171	1
FAM9A	SLC12A6	0.00171	1
BCL9	GRB2	0.00171	1
RSPH3	BCORL1	0.00171	1
5q-Del	Amp_13q22.1	0.00171	1
Del_4q35.1	Del_5q23.3	0.00172	1
FMN2	NEXN	0.00173	1
OR4D10	PTCH1	0.00173	1
Amp_6p21.1	Del_2p12	0.00174	1
B2M	ACVR1B	0.00175	1
FAM9A	EGR1	0.00175	1
GMPS	KDM6A	0.00175	1
17q-Amp	Amp_20q12	0.00175	1
ARID1A	NLRC4	0.00176	1
ARID1A	BCORL1	0.00176	1
PRKDC	RLIM	0.00176	1
NR1H3	CDK12	0.00176	1
FAM123B	SOX9	0.00177	1
Del_4q35.1	Del_15q15.2	0.00177	1
13q-Amp	Del_15q15.2	0.00178	1
Amp_20q12	Del_4q35.1	0.00178	1
FAM123B	ZBTB20	0.00179	1
OR4D10	LARP4B	0.00179	1
8p-Amp	Amp_19q12	0.00179	1
SELPLG	DCLK2	0.0018	1
MAPK6	GPATCH8	0.0018	1
EGR1	TOP2B	0.0018	1
P2RY13	ALDH1A3	0.0018	1
5q-Del	Del_15q15.2	0.00181	1
Amp_8p11.21	Amp_20p11.21	0.00181	1
Del_4p16.1	Del_10q23.31	0.00183	1
GPATCH8	PRPS1	0.00184	1
16p-Amp	6p-Amp	0.00184	1
Del_1p33	Del_18p11.31	0.00184	1
Del_1p13.2	Del_8q11.1	0.00184	1
ARID1A	C2orf29	0.00185	1
PTCH1	FKBP9	0.00185	1
PTCH1	ALDH1A3	0.00185	1
APC	NF1	0.00186	1
PTCH1	PLAGL2	0.00186	1
FMN2	DDX26B	0.00187	1
Amp_11p15.5	Amp_20q12	0.00187	1
NF2	C11orf30	0.00188	1
ZBTB20	ALPK2	0.0019	1
ALPK2	MAP4K3	0.0019	1
2p-Amp	Amp_8p11.21	0.0019	1
2q-Amp	Amp_8p11.21	0.0019	1
6p-Amp	Amp_8p11.21	0.0019	1
Amp_13q12.2	Del_12p13.1	0.0019	1
FAM9A	ALPK2	0.00191	1
12q-Amp	Amp_8p11.23	0.00191	1
22q-Del	Del_3p26.3	0.00192	1
Del_15q11.2	Del_17q24.3	0.00192	1
Amp_12p13.33	Amp_19q12	0.00193	1
RB1	BMPR2	0.00194	1
ARID1A	CREBBP	0.00197	1
8p-Del	Del_14q11.2	0.00197	1
Del_1p13.2	Del_3p26.3	0.00197	1
FAM123B	SLC12A6	0.00198	1
Amp_11p15.5	Amp_17q24.1	0.00198	1
Del_5q23.3	Del_17q24.3	0.00198	1
BCOR	CDK12	0.00199	1
NF2	MAPK6	0.00199	1
Del_4q35.1	Del_16p13.3	0.00199	1
5q-Del	Del_15q21.1	0.002	1
Del_5q23.3	Del_15q22.33	0.002	1
14q-Del	21q-Del	0.00201	1
15q-Del	Del_10q23.31	0.00201	1
4p-Del	Amp_13q22.1	0.00201	1
Amp_20q13.12	Del_4q35.1	0.00201	1
MVK	ZBTB20	0.00202	1
MVK	MAP4K3	0.00202	1
ZBTB20	PRRG1	0.00202	1
Del_6q26	Del_15q15.2	0.00202	1
8p-Del	Amp_13q12.2	0.00203	1
Amp_13q22.1	Del_12p13.1	0.00203	1
12q-Amp	Amp_8q24.21	0.00205	1
APC	Amp_13q12.13	0.00206	1
8p-Del	Del_8q11.1	0.00207	1
FMN2	SETD2	0.00208	1
Amp_13q12.13	Del_1p13.2	0.00208	1
OR4D10	ASXL1	0.0021	1
FAM123B	GMPS	0.00211	1
CHUK	CREBBP	0.00211	1
C11orf30	CREBBP	0.00211	1
Del_8p23.2	Del_14q11.2	0.00211	1
Amp_20p12.1	Del_18q12.2	0.00212	1
Del_4q35.1	Del_15q21.1	0.00212	1
Del_5q21.2	Del_8p23.2	0.00212	1
MAPK6	NLRC4	0.00213	1
BCL9	ALDH1A3	0.00213	1
NLRC4	SLC26A8	0.00213	1
NLRC4	FKBP9	0.00213	1
C11orf30	ZNF486	0.00213	1
DIP2B	TOP2B	0.00213	1
SLC26A8	BCORL1	0.00213	1
TOP2B	LARP4B	0.00213	1
FKBP9	BCORL1	0.00213	1
Del_4q22.1	Del_6q26	0.00213	1
Del_4q22.1	Del_19p13.3	0.00213	1
14q-Del	1p-Del	0.00214	1
Del_1p33	Del_4q35.1	0.00214	1
PIK3R1	PTEN	0.00216	1
RNF43	IDH1	0.00217	1
16p-Amp	18p-Del	0.00217	1
18p-Del	Del_17q24.3	0.00218	1
4p-Del	Del_10q23.31	0.00219	1
C2orf29	CREBBP	0.0022	1
FKBP9	CREBBP	0.0022	1
Amp_2q33.1	Amp_8p11.23	0.0022	1
Amp_20p12.1	Del_18q21.2	0.0022	1
STARD3NL	L1TD1	0.00221	1
L1TD1	FYN	0.00221	1
RNF43	NF2	0.00222	1
CDH1	MAPK6	0.00222	1
CDH1	C2orf29	0.00222	1
WNT1	IDH1	0.00224	1
MGA	PIK3R1	0.00224	1
GRB2	IFT57	0.00224	1
Del_5q21.2	Del_8p22	0.00224	1
ROS1	SETD2	0.00225	1
5q-Del	Amp_5p12	0.00227	1
Del_5q23.3	Del_22q13.32	0.00231	1
BMPR2	MAP4K3	0.00233	1
SELPLG	OR4D10	0.00234	1
OR4D10	FKBP9	0.00234	1
18p-Del	Amp_17q24.1	0.00234	1
Amp_20q12	Del_4p16.1	0.00234	1
RNF43	NF1	0.00235	1
13q-Amp	4p-Del	0.00235	1
16p-Amp	7p-Amp	0.00235	1
Amp_6p21.1	Del_22q13.32	0.00235	1
Del_3p26.3	Del_17p12	0.00237	1
21q-Del	4p-Del	0.0024	1
CDH1	LARP4B	0.00241	1
MPHOSPH10	HLA-A	0.00241	1
1p-Del	Del_8q11.1	0.00241	1
13q-Amp	5q-Del	0.00242	1
APC	Amp_20q12	0.00243	1
ZFP36L2	BCOR	0.00243	1
DIP2B	RBBP7	0.00243	1
DDX26B	CDK12	0.00243	1
HLA-A	LARP4B	0.00243	1
21q-Del	Del_5q23.3	0.00244	1
Del_1p33	Del_15q22.33	0.00246	1
EGR1	SLC12A6	0.00247	1
MVK	ROS1	0.00247	1
MAP4K3	CTNNB1	0.00247	1
20p-Amp	Amp_11p15.5	0.00247	1
ARID1A	SMAD4	0.00249	1
CDH1	ASXL1	0.00249	1
Amp_20p12.1	Del_18q22.1	0.00249	1
PLAGL2	BCORL1	0.00251	1
PLAGL2	SLC12A6	0.00251	1
12q-Amp	Amp_8p11.21	0.00252	1
16q-Amp	20q-Amp	0.00253	1
8q-Amp	Del_18q21.2	0.00254	1
17p-Del	Amp_20p11.21	0.00254	1
16p-Amp	Amp_20q13.12	0.00257	1
Del_8q11.1	Del_15q21.1	0.00257	1
7p-Amp	Amp_17q12	0.00258	1
8q-Amp	Amp_17q12	0.00258	1
15q-Del	Del_17q24.3	0.00258	1
1p-Del	4q-Del	0.00258	1
Del_4p16.1	Del_14q11.2	0.00259	1
ROS1	SMAD4	0.0026	1
CDH1	DDX26B	0.00261	1
BMPR2	CTNNB1	0.00261	1
7q-Amp	Amp_8p11.21	0.00261	1
8q-Amp	18q-Del	0.00261	1
APC	Amp_20q11.21	0.00262	1
PRRG1	ATM	0.00262	1
17p-Del	Del_3p26.3	0.00263	1
22q-Del	Del_6q26	0.00263	1
MLH1	CDK12	0.00264	1
ALG12	PLAGL2	0.00264	1
15q-Del	Del_10q25.2	0.00264	1
12q-Amp	7p-Amp	0.00265	1
Amp_8p11.21	Del_5q23.3	0.00266	1
Del_1p33	Del_15q15.2	0.00266	1
Del_10q25.2	Del_17p12	0.00266	1
13q-Amp	15q-Del	0.00267	1
HLA-A	SETD2	0.00268	1
BMPR2	BIRC3	0.00268	1
Del_4q35.1	Del_6q26	0.00268	1
Del_4q35.1	Del_19p13.3	0.00268	1
MAPK6	PRKDC	0.00269	1
Del_10q21.1	Del_15q11.2	0.00269	1
Del_10q21.1	Del_17p12	0.00269	1
Amp_8q24.21	Amp_13q12.2	0.0027	1
12p-Amp	2p-Amp	0.00271	1
ATXN3L	NLRC4	0.00273	1
NLRC4	L1TD1	0.00273	1
ERBB2	RB1	0.00274	1
Amp_19q12	Amp_20q12	0.00274	1
MGA	DIP2B	0.00276	1
Del_4p16.1	Del_5q21.2	0.00276	1
EGR1	CTNNB1	0.00277	1
8p-Del	Amp_8p11.21	0.00277	1
Amp_16p11.2	Del_8p23.2	0.00277	1
Amp_13q22.1	Del_1p36.11	0.00281	1
MVK	PTCH1	0.00283	1
Amp_8q24.21	Amp_17q24.1	0.00283	1
FMN2	RPTN	0.00286	1
8p-Del	Del_19p13.3	0.00286	1
FMN2	BCL9	0.00287	1
FMN2	BCORL1	0.00287	1
Del_4p16.1	Del_5q23.3	0.00287	1
Amp_8p11.23	Amp_12p13.33	0.0029	1
NF2	FBXW7	0.00291	1
7p-Amp	Amp_2q33.1	0.00291	1
8q-Amp	Amp_2q33.1	0.00291	1
Del_3p26.3	Del_21q11.2	0.00291	1
CDH1	RHOA	0.00292	1
C11orf30	RB1	0.00292	1
GGT1	8q-Amp	0.00293	1
MGA	MPHOSPH10	0.00293	1
EGR1	IFT57	0.00294	1
EGR1	CREBBP	0.00295	1
NF1	KDM6A	0.00295	1
17q-Amp	Amp_20q13.12	0.00295	1
5q-Del	Del_4q35.1	0.00295	1
BCOR	FAM9A	0.00298	1
SELPLG	NF1	0.00298	1
MAPK6	RPTN	0.00298	1
MAPK6	NF1	0.00298	1
FAM9A	DIP2B	0.00298	1
FAM9A	LARP4B	0.00298	1
NF1	SLC26A8	0.00298	1
SLC26A8	GMPS	0.00298	1
17q-Amp	18p-Del	0.00298	1
20p-Del	Del_15q22.33	0.00298	1
Amp_6p21.1	Del_3p26.3	0.00299	1
8q-Amp	Del_18q22.1	0.00301	1
ZFP36L2	ALPK2	0.00302	1
OR4D10	NF2	0.00302	1
ALPK2	RBPJ	0.00302	1
ALPK2	HLA-A	0.00302	1
ASXL1	RBBP7	0.00302	1
4p-Del	Amp_20q12	0.00302	1
SLC26A8	KDM6A	0.00303	1
21q-Del	4q-Del	0.00303	1
EGR1	ALPK2	0.00304	1
ST3GAL6	ALPK2	0.00304	1
PTCH1	RBPJ	0.00304	1
PTCH1	RBBP7	0.00304	1
RLIM	PTEN	0.00304	1
1p-Del	Del_18p11.31	0.00304	1
Del_15q21.1	Del_21q21.1	0.00304	1
RB1	NEXN	0.00305	1
FMN2	PLAGL2	0.00307	1
8q-Amp	Del_18q12.2	0.00307	1
Del_5q21.2	Del_18p11.31	0.00307	1
13q-Amp	Amp_8p11.21	0.00311	1
16p-Amp	Del_8p23.2	0.00312	1
MLH1	ROS1	0.00313	1
Amp_10q22.3	Del_10q23.31	0.00313	1
Amp_17q24.1	Amp_20q11.21	0.00314	1
Del_4q22.1	Del_7q31.1	0.00315	1
22q-Del	Del_17q24.3	0.00318	1
Del_4p16.1	Del_17q24.3	0.00318	1
Del_1p13.2	Del_15q15.2	0.00319	1
RNF43	CDH1	0.00323	1
Amp_16p11.2	Amp_20q12	0.00326	1
15q-Del	Del_2p12	0.00327	1
B2M	CDK12	0.00328	1
HLA-A	CDK12	0.00328	1
FMN2	PRKDC	0.0033	1
OR4D10	PIK3R1	0.0033	1
PIK3R1	DDX26B	0.0033	1
Del_3p26.3	Del_18q21.2	0.0033	1
OR4D10	CREBBP	0.00331	1
Del_4q22.1	Del_17q24.3	0.00331	1
BCOR	SLC12A6	0.00332	1
PRKDC	KDM6A	0.00332	1
NLRC4	LARP4B	0.00332	1
17q-Amp	Amp_8p11.23	0.00332	1
Amp_13q22.1	Del_1p13.2	0.00332	1
NF1	GRB2	0.00333	1
8q-Amp	Amp_6p21.1	0.00334	1
Amp_8q24.21	Amp_13q22.1	0.00335	1
20p-Del	Del_22q13.32	0.00338	1
RNF43	GMPS	0.00339	1
Amp_1q31.1	Amp_12p13.33	0.0034	1
PRRG1	TOP2B	0.00341	1
15q-Del	Del_10q21.1	0.00341	1
Amp_20q11.21	Del_4p16.1	0.00342	1
GGT1	18q-Del	0.00343	1
FBXW7	ALDH1A3	0.00343	1
IQCD	NLRC4	0.00343	1
BCORL1	ZNF486	0.00343	1
ALPK2	C11orf30	0.00345	1
ZBTB20	NLRC4	0.00346	1
ZBTB20	BCORL1	0.00346	1
ZBTB20	SLC12A6	0.00346	1
BCORL1	MAP4K3	0.00346	1
7q-Amp	Del_18q21.2	0.00347	1
Del_10q25.2	Del_17q24.3	0.00348	1
C11orf30	ATM	0.0035	1
2p-Amp	Amp_8q24.21	0.0035	1
2p-Amp	Del_2p12	0.0035	1
2q-Amp	Amp_8q24.21	0.0035	1
2q-Amp	Del_2p12	0.0035	1
6p-Amp	Amp_8q24.21	0.0035	1
12p-Amp	Del_16p13.3	0.00352	1
4q-Del	Del_16p13.3	0.00352	1
GGT1	20q-Amp	0.00353	1
BCOR	PTEN	0.00354	1
Del_17q24.3	Del_18p11.31	0.00354	1
22q-Del	Amp_11p15.5	0.00356	1
TXNDC2	PTEN	0.00357	1
Del_5q21.2	Del_10q21.1	0.00357	1
PTCH1	DIP2B	0.00358	1
DIP2B	RB1	0.00358	1
ARID1A	B2M	0.0036	1
ARID1A	HLA-A	0.0036	1
ARID1A	GMPS	0.0036	1
PRKDC	SMAD4	0.0036	1
PTCH1	PRPS1	0.0036	1
RB1	PRPS1	0.0036	1
RB1	PTGDR	0.0036	1
NLRC4	PTEN	0.00361	1
B2M	L1TD1	0.00364	1
ATXN3L	RBBP7	0.00364	1
RBBP7	L1TD1	0.00364	1
12p-Amp	Amp_8p11.21	0.00364	1
4q-Del	Del_10q23.31	0.00364	1
4q-Del	Del_14q11.2	0.00364	1
Del_1p13.2	Del_14q11.2	0.00364	1
Del_1p13.2	Del_15q21.1	0.00364	1
TXNDC2	C11orf30	0.00365	1
Amp_6p21.1	Del_6p25.3	0.00365	1
Del_3p26.3	Del_6p25.3	0.00365	1
6p-Amp	7p-Amp	0.00366	1
6p-Amp	8q-Amp	0.00366	1
Del_1p33	Del_21q11.2	0.00366	1
WNT1	ALG12	0.00367	1
LARP4B	ATM	0.00368	1
22q-Del	5q-Del	0.00368	1
Del_1p36.11	Del_12p13.1	0.00368	1
ST3GAL6	PRRG1	0.00369	1
7q-Amp	Del_17p12	0.0037	1
Del_5q21.2	Del_22q13.32	0.0037	1
Del_5q22.2	Del_15q15.2	0.00371	1
SELPLG	RLIM	0.00374	1
P2RY13	ROS1	0.00375	1
DIP2B	SETD2	0.00375	1
ROS1	BIRC3	0.00375	1
LARP4B	SETD2	0.00375	1
21q-Del	Del_1p33	0.00375	1
SELPLG	PTGDR	0.00377	1
MAPK6	PTGDR	0.00377	1
ALDH1A3	PTGDR	0.00377	1
Del_5q23.3	Del_21q21.1	0.00378	1
C11orf30	DCLK2	0.00381	1
FAM9A	CDK12	0.00382	1
1p-Del	Del_17p12	0.00382	1
8q-Amp	Del_5q23.3	0.00383	1
20p-Del	Del_5q23.3	0.00387	1
13q-Amp	Del_21q11.2	0.0039	1
15q-Del	Del_21q21.1	0.0039	1
Amp_5p12	Del_5q12.1	0.0039	1
RNF43	C11orf30	0.00393	1
13q-Amp	Amp_17q12	0.00393	1
PRKDC	DDX26B	0.00394	1
MAPK6	MGA	0.00399	1
2p-Amp	Del_12p13.1	0.004	1
2q-Amp	Del_12p13.1	0.004	1
NF1	CDK12	0.00402	1
Amp_11p15.5	Amp_20q13.12	0.00402	1
CDH1	TOP2B	0.00405	1
Del_1p36.11	Del_10q23.31	0.00405	1
PTEN	SETD2	0.00409	1
Del_6q26	Del_21q11.2	0.00411	1
FMN2	SMAD4	0.00413	1
NF2	PLAGL2	0.00414	1
Del_2p12	Del_4q35.1	0.00414	1
IQCD	SETD2	0.00415	1
8q-Amp	Amp_13q12.13	0.00416	1
BCOR	FKBP9	0.00417	1
MAPK6	DIP2B	0.00417	1
DIP2B	SLC26A8	0.00417	1
4p-Del	Del_14q11.2	0.00418	1
NF1	FBXW7	0.00419	1
7q-Amp	Del_18q12.2	0.00419	1
15q-Del	21q-Del	0.00419	1
15q-Del	Del_5q21.2	0.00419	1
OR4D10	ERBB2	0.0042	1
APC	Del_18q12.2	0.00423	1
ZFP36L2	CDH1	0.00423	1
CDH1	RBPJ	0.00423	1
FAM9A	DDX26B	0.00423	1
GGT1	Amp_20q11.21	0.00424	1
Del_2p12	Del_10q21.1	0.00424	1
ST3GAL6	LARP4B	0.00428	1
MLH1	SETD2	0.00431	1
MGA	CDK12	0.00431	1
ARID1A	PRRG1	0.00433	1
Del_5q22.2	Del_15q21.1	0.00433	1
ALPK2	DIP2B	0.00434	1
ASXL1	DIP2B	0.00434	1
13q-Amp	Del_22q13.32	0.00434	1
15q-Del	Del_1p33	0.00434	1
22q-Del	Del_5q12.1	0.00436	1
APC	13q-Amp	0.00437	1
7q-Amp	Del_18p11.31	0.00437	1
GRB2	ROS1	0.00438	1
PLAGL2	CREBBP	0.00439	1
Del_2p12	Del_15q22.33	0.00439	1
ZFP36L2	ZBTB20	0.0044	1
RPTN	MAP4K3	0.0044	1
MAP4K3	GMPS	0.0044	1
CDH1	KDM6A	0.00441	1
APC	Amp_13q22.1	0.00445	1
Del_6q26	Del_19p13.3	0.00446	1
Amp_19q12	Amp_20q13.12	0.00447	1
PLAGL2	PRPS1	0.00448	1
TXNDC2	P2RY13	0.00449	1
TXNDC2	GPATCH8	0.00449	1
NF2	IFT57	0.0045	1
Del_15q22.33	Del_21q11.2	0.0045	1
Amp_1q31.1	Amp_6p21.1	0.00451	1
Del_3p14.2	Del_16p13.3	0.00451	1
ASXL1	TOP2B	0.00452	1
6p-Amp	8p-Amp	0.00452	1
20p-Del	Del_1p13.2	0.00454	1
EGR1	BIRC3	0.00455	1
ST3GAL6	DCLK2	0.00455	1
ST3GAL6	GPATCH8	0.00455	1
RLIM	NEXN	0.00456	1
2p-Amp	Amp_6p21.1	0.00456	1
ZFP36L2	NF2	0.00457	1
NF2	HLA-A	0.00457	1
20p-Amp	Del_17p12	0.00457	1
ZFP36L2	FBXW7	0.00458	1
PLEKHF2	PTCH1	0.0046	1
MAPK6	SLC26A8	0.00461	1
NF1	BCL9	0.00461	1
SLC26A8	FKBP9	0.00461	1
20p-Del	Del_8p22	0.00461	1
MVK	NLRC4	0.00463	1
MVK	SLC12A6	0.00463	1
PRRG1	SLC12A6	0.00463	1
PLAGL2	CDK12	0.00465	1
8q-Amp	Del_17p12	0.00465	1
NF1	RBBP7	0.00468	1
NF1	HLA-A	0.00468	1
PIK3R1	GMPS	0.0047	1
20q-Amp	Del_21q11.2	0.0047	1
NLRC4	CDK12	0.00471	1
SLC12A6	CDK12	0.00471	1
MVK	IFT57	0.00472	1
Del_1p36.11	Del_15q11.2	0.00472	1
NLRC4	CTNNB1	0.00473	1
Del_15q22.33	Del_17q24.3	0.00473	1
RLIM	SMAD4	0.00475	1
MPHOSPH10	SMAD4	0.00475	1
MLH1	TOP2B	0.00477	1
8q-Amp	Amp_13q12.2	0.00478	1
NF1	C11orf30	0.0048	1
DDX26B	CTNNB1	0.00481	1
17q-Amp	8q-Amp	0.00483	1
NF1	ATXN3L	0.00485	1
RNF43	PIK3R1	0.00487	1
IQCD	CREBBP	0.00487	1
IFT57	CREBBP	0.00487	1
GGT1	Del_18q12.2	0.00488	1
FBXW7	TPRKB	0.00488	1
ASXL1	SMAD4	0.00488	1
FMN2	C11orf30	0.00489	1
GGT1	15q-Del	0.0049	1
MGA	MVK	0.0049	1
C11orf30	DDX26B	0.00492	1
NF1	PRPS1	0.00493	1
13q-Amp	Amp_15q26.1	0.00494	1
RBBP7	BMPR2	0.00496	1
BCOR	KDM6A	0.00497	1
LARP4B	KDM6A	0.00497	1
MGA	SLC12A6	0.00498	1
Amp_5p12	Amp_20q11.21	0.005	1
RNF43	DIP2B	0.00501	1
PTCH1	GPATCH8	0.00501	1
RB1	GPATCH8	0.00501	1
21q-Del	Del_15q15.2	0.00501	1
PTCH1	RLIM	0.00502	1
RLIM	RB1	0.00502	1
MPHOSPH10	RB1	0.00502	1
7p-Amp	Del_15q15.2	0.00502	1
NF2	SLC12A6	0.00506	1
B2M	FAM9A	0.00507	1
B2M	RSPH3	0.00507	1
ZBTB20	PTGDR	0.00507	1
Del_2q22.1	Del_8q11.1	0.00507	1
FAM123B	PRKDC	0.00508	1
MAPK6	SETD2	0.00508	1
FKBP9	SETD2	0.00508	1
BCL9	ATM	0.00514	1
GMPS	ATM	0.00514	1
4p-Del	Del_19p13.3	0.00514	1
18q-Del	Del_10q21.1	0.00515	1
Amp_13q22.1	Del_15q22.33	0.00516	1
Amp_20q11.21	Del_4q35.1	0.00516	1
CDH1	ZBTB20	0.00517	1
CDH1	IDH1	0.00517	1
BMPR2	CDK12	0.00517	1
ARID1A	FAM123B	0.00521	1
ARID1A	MLH1	0.00521	1
FMN2	ROS1	0.00521	1
Del_1p33	Del_3p26.3	0.00522	1
GGT1	Amp_20q12	0.00525	1
MAPK6	TPRKB	0.00525	1
TPRKB	FKBP9	0.00525	1
Amp_16p11.2	Del_8p22	0.00526	1
FAM123B	ASXL1	0.00527	1
MLH1	ASXL1	0.00527	1
7q-Amp	18q-Del	0.00529	1
WNT1	ATM	0.0053	1
BCL9	C11orf30	0.0053	1
BCOR	ATXN3L	0.00532	1
16p-Amp	7q-Amp	0.00533	1
GRB2	BMPR2	0.00536	1
MLH1	WNT1	0.00537	1
13q-Amp	Del_4q22.1	0.00538	1
Del_8p22	Del_16p13.3	0.0054	1
FAM123B	DCLK2	0.00543	1
MLH1	NR1H3	0.00543	1
MLH1	BIRC3	0.00543	1
WNT1	RB1	0.00543	1
FMN2	NF2	0.00545	1
Del_3p14.2	Del_7q31.1	0.00545	1
8p-Amp	Amp_20p11.21	0.00546	1
ROS1	DDX26B	0.00547	1
8p-Del	Amp_13q12.13	0.00547	1
Del_10q25.2	Del_18p11.31	0.00551	1
OR4D10	ST3GAL6	0.00552	1
5q-Del	Amp_8q24.21	0.00553	1
Amp_20q13.12	Del_4p16.1	0.00553	1
Amp_13q22.1	Del_15q21.1	0.00557	1
1p-Del	Del_4q22.1	0.00558	1
APC	Del_18q21.2	0.0056	1
Amp_19q12	Amp_20p11.21	0.00561	1
TP53	Del_4q22.1	0.00562	1
SLC26A8	NEXN	0.00562	1
L1TD1	FKBP9	0.00562	1
8q-Amp	Amp_17q24.1	0.00562	1
15q-Del	Amp_20p11.21	0.00562	1
PRKDC	MAP4K3	0.00565	1
STARD3NL	ATM	0.00567	1
18p-Del	Amp_17q12	0.00568	1
ALPK2	ALDH1A3	0.00569	1
ASXL1	FKBP9	0.00569	1
NF2	ERBB2	0.00572	1
OR4D10	SMAD4	0.00574	1
21q-Del	Del_15q21.1	0.00576	1
OR4D10	TOP2B	0.00578	1
DDX26B	TOP2B	0.00578	1
STARD3NL	RHOA	0.0058	1
IQCD	FYN	0.0058	1
MVK	PRRG1	0.0059	1
TP53	22q-Del	0.00591	1
BCOR	IQCD	0.00591	1
IFT57	LARP4B	0.00591	1
LARP4B	ZNF486	0.00591	1
Del_4q35.1	Del_12p13.1	0.00592	1
Del_10q21.1	Del_16q23.1	0.00592	1
FMN2	PIK3R1	0.00594	1
Del_4p16.1	Del_21q21.1	0.00594	1
13q-Amp	Amp_1q31.1	0.00595	1
Del_1p33	Del_10q21.1	0.00595	1
6p-Amp	Amp_20p12.1	0.00597	1
PIK3R1	ROS1	0.00598	1
FMN2	C2orf29	0.006	1
FMN2	SLC26A8	0.006	1
FMN2	FKBP9	0.006	1
PRRG1	SETD2	0.00601	1
RPTN	PTEN	0.00605	1
RBPJ	PTEN	0.00605	1
Amp_20p11.21	Del_15q11.2	0.00606	1
18q-Del	Del_10q25.2	0.00607	1
STARD3NL	BCL9	0.00608	1
STARD3NL	NLRC4	0.00608	1
STARD3NL	BCORL1	0.00608	1
BCL9	GPATCH8	0.00608	1
BCL9	BIRC3	0.00608	1
P2RY13	BCORL1	0.00608	1
NLRC4	FYN	0.00608	1
NLRC4	GPATCH8	0.00608	1
PCBP1	SLC12A6	0.00608	1
GPATCH8	SLC12A6	0.00608	1
16p-Amp	20q-Amp	0.0061	1
22q-Del	Del_21q11.2	0.00613	1
Del_4p16.1	Del_21q11.2	0.00613	1
17q-Amp	Amp_11p15.5	0.00616	1
TP53	20p-Amp	0.00619	1
ERBB2	SMAD4	0.00619	1
14q-Del	Amp_20p11.21	0.00619	1
17p-Del	Amp_8q24.21	0.00619	1
Del_10q21.1	Del_15q22.33	0.0062	1
WNT1	PRPS1	0.00621	1
Amp_17q12	Del_18p11.31	0.00621	1
MLH1	ATXN3L	0.00622	1
NF1	LARP4B	0.00622	1
C11orf30	RBBP7	0.00623	1
C11orf30	GMPS	0.00623	1
APC	Amp_20q13.12	0.00624	1
9p-Amp	Amp_8q24.21	0.00627	1
Del_3p26.3	Del_14q11.2	0.00632	1
21q-Del	Del_8q11.1	0.00637	1
FKBP9	PTEN	0.00638	1
13q-Amp	Del_4p16.1	0.0064	1
2p-Amp	6p-Amp	0.00643	1
2p-Amp	Amp_15q26.1	0.00643	1
2q-Amp	Amp_15q26.1	0.00643	1
BCL9	TOP2B	0.00645	1
TOP2B	BCORL1	0.00645	1
Amp_8q24.21	Amp_13q12.13	0.00645	1
2p-Amp	7q-Amp	0.00647	1
2q-Amp	7q-Amp	0.00647	1
7q-Amp	Amp_15q26.1	0.00647	1
FMN2	ALG12	0.00648	1
NF2	HIST1H1T	0.00648	1
FAM123B	ATM	0.0065	1
RLIM	BMPR2	0.0065	1
MPHOSPH10	BMPR2	0.0065	1
20p-Del	Del_4p16.1	0.00653	1
ZBTB20	PTEN	0.00656	1
PTEN	IDH1	0.00656	1
Amp_17q24.1	Del_2p12	0.00657	1
TXNDC2	FMN2	0.00658	1
B2M	EGR1	0.00661	1
20q-Amp	Amp_17q24.1	0.00664	1
Del_1p36.11	Del_5q23.3	0.00665	1
Del_3p26.3	Del_4q22.1	0.00665	1
Del_10q23.31	Del_17q24.3	0.00666	1
BCOR	MAP4K3	0.00667	1
4q-Del	Del_10q25.2	0.00673	1
L1TD1	SETD2	0.00674	1
ARID1A	DIP2B	0.00676	1
ZBTB20	FKBP9	0.00676	1
C2orf29	IDH1	0.00676	1
SLC26A8	MAP4K3	0.00676	1
Del_2p12	Del_2q22.1	0.00677	1
Amp_20q11.21	Del_5q12.1	0.00679	1
20q-Amp	Del_4q35.1	0.0068	1
ATXN3L	NEXN	0.00683	1
16q-Amp	Del_18q12.2	0.00685	1
CDH1	CREBBP	0.00686	1
EGR1	ROS1	0.00686	1
MGA	FYN	0.00686	1
MGA	GPATCH8	0.00686	1
MGA	BIRC3	0.00686	1
12q-Amp	Amp_20p12.1	0.00691	1
9p-Amp	Amp_20p12.1	0.00691	1
Amp_20p12.1	Del_10q21.1	0.00691	1
GGT1	Del_15q22.33	0.00692	1
Amp_13q22.1	Del_21q11.2	0.00692	1
FAM123B	ERBB2	0.00693	1
MLH1	ERBB2	0.00693	1
Amp_20p12.1	Del_8p22	0.00694	1
ALPK2	ASXL1	0.00696	1
Amp_17q24.1	Del_8p22	0.00696	1
ARID1A	P2RY13	0.00699	1
ARID1A	GPATCH8	0.00699	1
17q-Amp	Amp_8p11.21	0.007	1
FMN2	PCBP1	0.00702	1
SELPLG	GRB2	0.00704	1
MAPK6	GRB2	0.00704	1
FAM9A	SLC26A8	0.00704	1
FAM9A	ALDH1A3	0.00704	1
RSPH3	C2orf29	0.00704	1
RSPH3	FKBP9	0.00704	1
ZBTB20	HIST1H1T	0.00705	1
7q-Amp	18p-Del	0.00709	1
8p-Del	Del_1p36.11	0.00711	1
TP53	RPTN	0.00715	1
BCOR	LARP4B	0.00716	1
Del_12p13.1	Del_22q13.32	0.00716	1
GGT1	Amp_20q13.12	0.00719	1
MVK	P2RY13	0.00725	1
MVK	GPATCH8	0.00725	1
7q-Amp	Del_5q21.2	0.00728	1
6p-Amp	Amp_16p11.2	0.0073	1
16p-Amp	Del_19p13.3	0.00731	1
Del_6q26	Del_8q11.1	0.00731	1
Del_8q11.1	Del_19p13.3	0.00731	1
Del_1p36.11	Del_6q26	0.00733	1
9p-Amp	Del_18q22.1	0.00734	1
NF1	FYN	0.00735	1
NF1	GPATCH8	0.00735	1
21q-Del	Amp_20q13.12	0.00735	1
PIK3R1	TOP2B	0.00738	1
BCL9	ASXL1	0.00739	1
Del_1p13.2	Del_5q12.1	0.0074	1
Del_2p12	Del_15q15.2	0.0074	1
TP53	SMAD4	0.00747	1
TPRKB	PTCH1	0.00747	1
PIK3R1	LARP4B	0.00749	1
SMAD2	ROS1	0.00751	1
RHOA	CDK12	0.00752	1
CDK12	ZNF486	0.00752	1
BCL9	BMPR2	0.00753	1
ALPK2	NEXN	0.00755	1
PRRG1	CREBBP	0.00758	1
Del_5q12.1	Del_15q11.2	0.00761	1
GGT1	Del_18q22.1	0.00762	1
NF1	RLIM	0.00762	1
NF1	MPHOSPH10	0.00762	1
16q-Amp	Amp_12p13.33	0.00762	1
RBBP7	CTNNB1	0.00765	1
Amp_16p11.2	Del_19p13.3	0.00765	1
Del_2p12	Del_15q21.1	0.00776	1
Del_14q11.2	Del_21q21.1	0.00776	1
Amp_8p11.23	Amp_13q12.13	0.00778	1
MGA	HIST1H1T	0.00779	1
OR4D10	BCL9	0.00781	1
EGR1	MPHOSPH10	0.00781	1
BCL9	DDX26B	0.00781	1
ST3GAL6	RLIM	0.00781	1
NLRC4	DDX26B	0.00781	1
8q-Amp	Del_5q21.2	0.00785	1
FAM123B	OR4D10	0.00786	1
MLH1	OR4D10	0.00786	1
MLH1	DDX26B	0.00786	1
PTCH1	C2orf29	0.00788	1
PTCH1	SLC26A8	0.00788	1
C2orf29	RB1	0.00788	1
SLC26A8	RB1	0.00788	1
BCOR	PRRG1	0.00792	1
MVK	LARP4B	0.00792	1
4q-Del	Del_12p13.1	0.00792	1
Amp_8p11.21	Amp_20p12.1	0.00792	1
18p-Del	Amp_8q24.21	0.00793	1
FBXW7	ZNF486	0.008	1
CDH1	BCL9	0.00802	1
GPATCH8	KDM6A	0.00802	1
21q-Del	Amp_20q12	0.00803	1
CDH1	DCLK2	0.00804	1
CDH1	GPATCH8	0.00804	1
SMAD2	FKBP9	0.00806	1
NF2	CHUK	0.00807	1
Del_3p26.3	Del_4q35.1	0.00807	1
PLEKHF2	PLAGL2	0.00808	1
Amp_8p11.23	Amp_20p12.1	0.00808	1
Amp_13q22.1	Del_19p13.3	0.0081	1
TXNDC2	CTNNB1	0.00813	1
FMN2	ALPK2	0.00814	1
CRIPAK	PTCH1	0.00815	1
20q-Amp	4p-Del	0.00816	1
20p-Del	5q-Del	0.00816	1
Del_5q22.2	Del_8p22	0.00816	1
FAM9A	L1TD1	0.00817	1
ATXN3L	GRB2	0.00817	1
GRB2	NEXN	0.00817	1
RNF43	ASXL1	0.0082	1
17q-Amp	Amp_19q12	0.00821	1
Del_1p36.11	Del_5q22.2	0.00821	1
L1TD1	ATM	0.00824	1
NEXN	ATM	0.00824	1
SMAD2	DIP2B	0.00825	1
ARID1A	FKBP9	0.00829	1
GGT1	PTEN	0.00829	1
PTCH1	DDX26B	0.00829	1
Amp_16p11.2	Amp_20q11.21	0.0083	1
Amp_11p15.5	Del_1p36.11	0.00837	1
STARD3NL	SETD2	0.00839	1
SMAD4	ALDH1A3	0.00839	1
ZFP36L2	IFT57	0.0084	1
IQCD	RBBP7	0.0084	1
IFT57	HLA-A	0.0084	1
RBBP7	ZNF486	0.0084	1
RNF43	ATXN3L	0.00842	1
RNF43	NEXN	0.00842	1
FBXW7	CREBBP	0.00844	1
Amp_5p12	Amp_8q24.21	0.00845	1
Del_8p22	Del_17q24.3	0.00845	1
ARID1A	EGR1	0.00847	1
GGT1	Del_18q21.2	0.00849	1
Del_10q21.1	Del_17q24.3	0.00849	1
22q-Del	Del_5q21.2	0.0085	1
PRRG1	CTNNB1	0.00852	1
SMAD4	SETD2	0.00861	1
NF2	MGA	0.00875	1
7p-Amp	Del_7q31.1	0.00875	1
Del_5q21.2	Del_10q25.2	0.00876	1
PIK3R1	PRPS1	0.00877	1
Del_6q26	Del_15q21.1	0.00877	1
PRKDC	PRRG1	0.00879	1
Del_4q22.1	Del_10q23.31	0.00881	1
Del_3p26.3	Del_15q22.33	0.00886	1
ZBTB20	CDK12	0.00889	1
P2RY13	DCLK2	0.00889	1
P2RY13	GPATCH8	0.00889	1
DCLK2	FYN	0.00889	1
MAP4K3	CDK12	0.00889	1
14q-Del	Del_21q11.2	0.0089	1
Del_5q21.2	Del_15q22.33	0.00892	1
ARID1A	CHUK	0.00894	1
GRB2	CTNNB1	0.00894	1
ACVR1B	TOP2B	0.00899	1
TOP2B	Del_16q23.1	0.00899	1
Amp_13q12.2	Amp_15q26.1	0.00899	1
13q-Amp	Del_12p13.1	0.00902	1
1p-Del	Del_6q26	0.00908	1
Amp_2q33.1	Amp_12p13.33	0.00909	1
MAPK6	ST3GAL6	0.00915	1
MAPK6	PLEKHF2	0.00915	1
EGR1	FKBP9	0.00915	1
ST3GAL6	ALDH1A3	0.00915	1
C14orf184	CREBBP	0.00915	1
Amp_5p12	Amp_16p11.2	0.00919	1
TPRKB	SMAD4	0.00923	1
ALPK2	BIRC3	0.00924	1
BCL9	NLRC4	0.00925	1
BCL9	SLC12A6	0.00925	1
CTNNB1	KDM6A	0.00926	1
2p-Amp	Amp_13q22.1	0.00929	1
Amp_13q22.1	Amp_15q26.1	0.00929	1
MGA	DDX26B	0.00932	1
20p-Del	Del_15q15.2	0.00933	1
16p-Amp	Del_18q12.2	0.00934	1
Del_2p12	Del_15q11.2	0.00935	1
8p-Amp	5q-Del	0.00937	1
Del_1p33	Del_14q11.2	0.00938	1
SELPLG	NF2	0.00939	1
Del_5q23.3	Del_21q11.2	0.00942	1
NLRC4	PRPS1	0.00945	1
BCORL1	PTGDR	0.00945	1
PLAGL2	IFT57	0.00949	1
C11orf30	SLC26A8	0.00951	1
MPHOSPH10	ATM	0.00953	1
18p-Del	Del_8q11.1	0.00955	1
CDH1	MGA	0.00956	1
MVK	PIK3R1	0.00958	1
Del_15q15.2	Del_21q11.2	0.00961	1
GGT1	Amp_8p11.21	0.00963	1
Amp_19q12	Amp_20q11.21	0.00965	1
FAM123B	CDK12	0.00968	1
Del_5q22.2	Del_10q21.1	0.00969	1
Del_1p13.2	Del_5q22.2	0.00976	1
SMAD2	L1TD1	0.00977	1
Amp_2q33.1	Del_12p13.1	0.00977	1
CREBBP	KDM6A	0.00978	1
APC	20q-Amp	0.0098	1
ZFP36L2	BCORL1	0.00984	1
NLRC4	RBPJ	0.00984	1
NLRC4	HLA-A	0.00984	1
RBPJ	SLC12A6	0.00984	1
HLA-A	BCORL1	0.00984	1
HLA-A	SLC12A6	0.00984	1
SLC12A6	GMPS	0.00984	1
FAM123B	CREBBP	0.00986	1
Del_4p16.1	Del_10q25.2	0.00996	1
PLEKHF2	PTEN	0.00998	1
17q-Amp	Amp_8q24.21	0.01	1
4q-Del	Amp_6p21.1	0.01	1
WNT1	BMPR2	0.0101	1
FMN2	OR4D10	0.0101	1
GGT1	NF1	0.0101	1
Del_1p13.2	Del_5q21.2	0.0101	1
Del_8p22	Del_12p13.1	0.0101	1
IQCD	ROS1	0.0102	1
20p-Amp	14q-Del	0.0102	1
Amp_20q12	Del_1p33	0.0102	1
BCOR	BIRC3	0.0103	1
STARD3NL	DIP2B	0.0103	1
P2RY13	DIP2B	0.0103	1
DIP2B	DCLK2	0.0103	1
DCLK2	LARP4B	0.0103	1
PTEN	LARP4B	0.0103	1
FYN	LARP4B	0.0103	1
LARP4B	BIRC3	0.0103	1
18q-Del	Del_3p26.3	0.0103	1
20p-Del	Del_14q11.2	0.0103	1
20p-Del	Del_15q21.1	0.0103	1
21q-Del	Del_6q26	0.0103	1
21q-Del	Del_19p13.3	0.0103	1
4q-Del	Del_2p12	0.0103	1
8p-Del	Del_6q26	0.0103	1
TP53	Del_15q11.2	0.0104	1
TXNDC2	GGT1	0.0104	1
TXNDC2	TPRKB	0.0104	1
NF2	P2RY13	0.0104	1
IFT57	BMPR2	0.0104	1
Del_1p36.11	Del_5q12.1	0.0104	1
ZFP36L2	MVK	0.0105	1
B2M	PRRG1	0.0105	1
CDH1	CHUK	0.0105	1
MVK	RBBP7	0.0105	1
MVK	HLA-A	0.0105	1
MVK	GMPS	0.0105	1
PRRG1	HLA-A	0.0105	1
RLIM	ROS1	0.0105	1
13q-Amp	Del_15q21.1	0.0105	1
Del_4p16.1	Del_5q22.2	0.0105	1
ATXN3L	ST3GAL6	0.0106	1
ATXN3L	BMPR2	0.0106	1
ATXN3L	Del_10q25.2	0.0106	1
ST3GAL6	NEXN	0.0106	1
PTCH1	C11orf30	0.0106	1
BMPR2	NEXN	0.0106	1
CDH1	PRPS1	0.0107	1
OR4D10	GPATCH8	0.0107	1
OR4D10	BIRC3	0.0107	1
Del_5q12.1	Del_18p11.31	0.0107	1
TXNDC2	NF2	0.0108	1
BCOR	ATM	0.0108	1
VCX2	Del_5q22.2	0.0108	1
21q-Del	Del_17q24.3	0.0108	1
Del_5q23.3	Del_10q21.1	0.0108	1
OR4D10	ATM	0.0109	1
ERBB2	C14orf184	0.0109	1
12q-Amp	6p-Amp	0.0109	1
6p-Amp	9p-Amp	0.0109	1
8q-Amp	Del_5q22.2	0.0109	1
FAM123B	RBPJ	0.011	1
FAM123B	RBBP7	0.011	1
B2M	GMNN	0.011	1
MLH1	PIK3R1	0.011	1
MLH1	RBPJ	0.011	1
MLH1	RBBP7	0.011	1
MLH1	HLA-A	0.011	1
PLAGL2	PRRG1	0.011	1
PIK3R1	SETD2	0.011	1
RBBP7	GMNN	0.011	1
Amp_13q12.2	Del_8q11.1	0.011	1
TXNDC2	MAPK6	0.0111	1
WNT1	EGR1	0.0111	1
WNT1	ST3GAL6	0.0111	1
SELPLG	TOP2B	0.0111	1
BMPR2	KDM6A	0.0111	1
BMPR2	Del_16q23.1	0.0111	1
12p-Amp	16p-Amp	0.0111	1
20q-Amp	2p-Amp	0.0111	1
20q-Amp	2q-Amp	0.0111	1
7p-Amp	Del_3q26.31	0.0111	1
Del_5q23.3	Del_19p13.3	0.0111	1
Del_6q26	Del_16p13.3	0.0111	1
P2RY13	CREBBP	0.0112	1
PTCH1	LARP4B	0.0112	1
BIRC3	CREBBP	0.0112	1
18p-Del	Del_3p26.3	0.0112	1
21q-Del	Amp_20q11.21	0.0112	1
Del_1p36.11	Del_15q15.2	0.0112	1
Del_5q12.1	Del_22q13.32	0.0112	1
BCL9	PTEN	0.0113	1
PTEN	BCORL1	0.0113	1
Amp_13q12.13	Amp_15q26.1	0.0113	1
OR4D10	SETD2	0.0114	1
ASXL1	KDM6A	0.0114	1
DDX26B	SETD2	0.0114	1
PTEN	CREBBP	0.0114	1
CHUK	L1TD1	0.0115	1
CHUK	NEXN	0.0115	1
C11orf30	L1TD1	0.0115	1
PIK3R1	L1TD1	0.0115	1
Amp_13q12.13	Del_19p13.3	0.0115	1
Del_1p36.11	Del_5q21.2	0.0115	1
FMN2	EGR1	0.0116	1
FMN2	VCX2	0.0116	1
GGT1	8p-Amp	0.0116	1
GGT1	18p-Del	0.0116	1
NF1	IFT57	0.0116	1
IFT57	SLC26A8	0.0116	1
IFT57	FKBP9	0.0116	1
MPHOSPH10	CTNNB1	0.0116	1
FKBP9	ZNF486	0.0116	1
PRPS1	KDM6A	0.0117	1
TP53	Del_14q11.2	0.0118	1
ATXN3L	PTCH1	0.0118	1
18q-Del	Amp_17q12	0.0118	1
8p-Del	Del_5q12.1	0.0118	1
Amp_5p12	Amp_20q13.12	0.0118	1
ARID1A	NEXN	0.0119	1
PIK3R1	SLC12A6	0.0119	1
5q-Del	Del_15q11.2	0.0119	1
Amp_2q33.1	Amp_17q24.1	0.0119	1
Amp_17q24.1	Amp_19q12	0.0119	1
SELPLG	PRKDC	0.012	1
PRKDC	ALDH1A3	0.012	1
ASXL1	BMPR2	0.012	1
20p-Amp	Amp_17q12	0.012	1
APC	18q-Del	0.0121	1
ATXN3L	PTEN	0.0121	1
MPHOSPH10	PTEN	0.0121	1
4p-Del	Amp_20q11.21	0.0121	1
5q-Del	Del_18p11.31	0.0121	1
EGR1	ZBTB20	0.0122	1
EGR1	MAP4K3	0.0122	1
NF1	ASXL1	0.0122	1
BCL9	MPHOSPH10	0.0122	1
ZBTB20	ST3GAL6	0.0122	1
NLRC4	MPHOSPH10	0.0122	1
MPHOSPH10	BCORL1	0.0122	1
MPHOSPH10	SLC12A6	0.0122	1
Del_6p25.3	Del_17q24.3	0.0122	1
ARID1A	TOP2B	0.0123	1
MGA	RBBP7	0.0123	1
MGA	HLA-A	0.0123	1
MGA	GMPS	0.0123	1
PRRG1	RLIM	0.0123	1
RSPH3	2p-Amp	0.0123	1
20q-Amp	Del_4p16.1	0.0123	1
Amp_11p15.5	Del_10q21.1	0.0123	1
Del_15q11.2	Del_19p13.3	0.0123	1
APC	TP53	0.0124	1
MVK	ATM	0.0124	1
2p-Amp	Amp_12p13.33	0.0124	1
BCOR	FBXW7	0.0125	1
SMAD2	ALPK2	0.0125	1
OR4D10	ALPK2	0.0125	1
ALPK2	DDX26B	0.0125	1
PLAGL2	SETD2	0.0125	1
Amp_13q12.2	Del_21q11.2	0.0125	1
SMAD4	LARP4B	0.0126	1
13q-Amp	8q-Amp	0.0126	1
Amp_6p21.1	Del_3p14.2	0.0126	1
Del_8p23.2	Del_17q24.3	0.0126	1
13q-Amp	Amp_8q24.21	0.0127	1
16p-Amp	20p-Amp	0.0127	1
B2M	P2RY13	0.0128	1
ACVR1B	BCL9	0.0128	1
ACVR1B	NLRC4	0.0128	1
PRKDC	GRB2	0.0128	1
RPTN	P2RY13	0.0128	1
NR1H3	RBBP7	0.0128	1
RBPJ	GPATCH8	0.0128	1
RBBP7	GPATCH8	0.0128	1
HLA-A	BIRC3	0.0128	1
FYN	GMPS	0.0128	1
GPATCH8	GMPS	0.0128	1
2p-Amp	Amp_20q11.21	0.0128	1
2q-Amp	Amp_20q11.21	0.0128	1
22q-Del	Del_16p13.3	0.0128	1
B2M	KDM6A	0.0129	1
Amp_13q12.2	Del_1p33	0.0129	1
Del_1p33	Del_3p14.2	0.0129	1
Del_1p33	Del_5q21.2	0.0129	1
STARD3NL	PRKDC	0.013	1
PRKDC	P2RY13	0.013	1
PRKDC	DCLK2	0.013	1
RPTN	RB1	0.013	1
FBXW7	FKBP9	0.013	1
PTCH1	GMPS	0.013	1
RBPJ	RB1	0.013	1
RB1	HLA-A	0.013	1
STARD3NL	CDK12	0.0131	1
P2RY13	CDK12	0.0131	1
DCLK2	CDK12	0.0131	1
FYN	CDK12	0.0131	1
Amp_5p12	Del_5q21.2	0.0131	1
Del_1p36.11	Del_15q21.1	0.0131	1
Del_5q12.1	Del_15q21.1	0.0131	1
BCOR	DDX26B	0.0132	1
OR4D10	DIP2B	0.0132	1
DIP2B	DDX26B	0.0132	1
DDX26B	LARP4B	0.0132	1
16q-Amp	20p-Amp	0.0132	1
STARD3NL	PIK3R1	0.0133	1
ALPK2	PLAGL2	0.0133	1
C11orf30	CDK12	0.0133	1
PIK3R1	GPATCH8	0.0133	1
PIK3R1	BIRC3	0.0133	1
21q-Del	Del_10q21.1	0.0133	1
Amp_17q12	Del_2p12	0.0133	1
Del_15q15.2	Del_17q24.3	0.0133	1
ACVR1B	MLH1	0.0134	1
FBXW7	Del_7q31.1	0.0134	1
ATXN3L	IQCD	0.0134	1
ATXN3L	TOP2B	0.0134	1
ATXN3L	ZNF486	0.0134	1
IQCD	L1TD1	0.0134	1
IQCD	NEXN	0.0134	1
TOP2B	NEXN	0.0134	1
NEXN	ZNF486	0.0134	1
12p-Amp	8q-Amp	0.0134	1
17q-Amp	Amp_13q22.1	0.0134	1
Del_3q26.31	Del_6p25.3	0.0134	1
Del_3q26.31	Del_19p13.3	0.0134	1
Del_10q23.31	Del_16p13.3	0.0134	1
FMN2	CDK12	0.0135	1
P2RY13	CTNNB1	0.0135	1
NR1H3	CTNNB1	0.0135	1
GRB2	SETD2	0.0135	1
20q-Amp	Del_10q21.1	0.0135	1
Amp_1q31.1	Amp_13q12.13	0.0135	1
Amp_5p12	Amp_13q12.2	0.0135	1
13q-Amp	Del_15q22.33	0.0136	1
SELPLG	GMNN	0.0137	1
FAM9A	RB1	0.0137	1
MVK	RB1	0.0137	1
PTCH1	GRB2	0.0137	1
PTCH1	RSPH3	0.0137	1
RSPH3	RB1	0.0137	1
4p-Del	Del_10q25.2	0.0137	1
Amp_5p12	Del_5q23.3	0.0137	1
CDH1	NEXN	0.0138	1
MLH1	IQCD	0.0138	1
MLH1	ZNF486	0.0138	1
EGR1	ATM	0.0138	1
CHUK	IDH1	0.0138	1
C11orf30	MAP4K3	0.0138	1
C11orf30	IDH1	0.0138	1
SETD2	CTNNB1	0.0138	1
17q-Amp	Amp_6p21.1	0.0138	1
20p-Amp	Amp_8p11.21	0.0138	1
Amp_13q22.1	Del_1p33	0.0138	1
Del_2q22.1	Del_6q26	0.0138	1
SMAD2	ST3GAL6	0.0139	1
Amp_10q22.3	Del_10q25.2	0.0139	1
ATXN3L	CREBBP	0.014	1
L1TD1	CREBBP	0.014	1
PTEN	C14orf184	0.014	1
NEXN	CREBBP	0.014	1
Amp_17q24.1	Amp_20q12	0.014	1
APC	18p-Del	0.0141	1
FMN2	RBBP7	0.0141	1
FMN2	HLA-A	0.0141	1
SELPLG	ROS1	0.0141	1
ROS1	FKBP9	0.0141	1
4p-Del	Del_2p12	0.0141	1
Del_4q22.1	Del_21q21.1	0.0141	1
CDH1	CDK12	0.0142	1
LARP4B	PTGDR	0.0142	1
Amp_20p11.21	Del_15q22.33	0.0142	1
PLAGL2	CTNNB1	0.0143	1
9p-Amp	18q-Del	0.0143	1
20p-Del	Amp_13q22.1	0.0143	1
TP53	Del_5q22.2	0.0144	1
TXNDC2	CDH1	0.0144	1
MVK	ALDH1A3	0.0144	1
FBXW7	PRRG1	0.0145	1
PRRG1	ROS1	0.0145	1
12p-Amp	Amp_20p11.21	0.0145	1
17p-Del	Del_6p25.3	0.0145	1
Del_5q22.2	Del_8p23.2	0.0145	1
CRIPAK	ZFP36L2	0.0146	1
FAM123B	C11orf30	0.0146	1
MLH1	CHUK	0.0146	1
ALPK2	GRB2	0.0146	1
ASXL1	ATM	0.0146	1
13q-Amp	Amp_5p12	0.0146	1
Del_15q21.1	Del_17q24.3	0.0146	1
Amp_11p15.5	Amp_20p12.1	0.0147	1
APC	CDH1	0.0148	1
NF1	BCORL1	0.0148	1
ZBTB20	PIK3R1	0.0148	1
SELPLG	NLRC4	0.0149	1
MAPK6	BCL9	0.0149	1
MAPK6	SLC12A6	0.0149	1
SLC26A8	SLC12A6	0.0149	1
B2M	SETD2	0.015	1
TXNDC2	RB1	0.015	1
SETD2	GMPS	0.015	1
ATM	HIST1H1T	0.015	1
7p-Amp	Amp_17q24.1	0.015	1
20p-Del	Del_5q22.2	0.015	1
APC	Del_18q22.1	0.0151	1
RLIM	DCLK2	0.0151	1
RLIM	GPATCH8	0.0151	1
5q-Del	Del_22q13.32	0.0151	1
WNT1	PRRG1	0.0152	1
16p-Amp	Amp_12p13.33	0.0152	1
2p-Amp	Amp_20q12	0.0152	1
2q-Amp	Amp_20q12	0.0152	1
15q-Del	Del_8q11.1	0.0152	1
20p-Del	Del_15q11.2	0.0152	1
ERBB2	PRRG1	0.0153	1
TP53	Del_21q11.2	0.0154	1
B2M	OR4D10	0.0154	1
OR4D10	RBPJ	0.0154	1
OR4D10	GMPS	0.0154	1
ZBTB20	IQCD	0.0154	1
MAP4K3	ZNF486	0.0154	1
12p-Amp	Amp_5p12	0.0154	1
Del_1p13.2	Del_8p23.2	0.0154	1
MLH1	ALPK2	0.0155	1
20q-Amp	Del_21q21.1	0.0155	1
Amp_5p12	Del_2q22.1	0.0155	1
NF2	ASXL1	0.0156	1
FAM9A	PRPS1	0.0156	1
NF1	6p-Amp	0.0156	1
Amp_5p12	Amp_19q12	0.0156	1
CHUK	ALPK2	0.0157	1
Amp_6p21.1	Amp_17q12	0.0157	1
Del_3p14.2	Del_6p25.3	0.0157	1
RNF43	RSPH3	0.0158	1
SOX9	ALG12	0.0158	1
PLEKHF2	C11orf30	0.0158	1
PTGDR	CTNNB1	0.0159	1
14q-Del	Del_5q12.1	0.0159	1
1p-Del	Del_5q12.1	0.0159	1
ARID1A	CRIPAK	0.016	1
TP53	Del_21q21.1	0.016	1
ACVR1B	TPRKB	0.016	1
MLH1	PTGDR	0.016	1
DDX26B	CREBBP	0.016	1
TOP2B	MAP4K3	0.016	1
TXNDC2	CDK12	0.0161	1
FMN2	CREBBP	0.0161	1
4p-Del	Amp_20q13.12	0.0161	1
NF2	ST3GAL6	0.0162	1
TP53	NF1	0.0163	1
SMAD2	C11orf30	0.0163	1
MAPK6	ATM	0.0164	1
PRKDC	NEXN	0.0164	1
13q-Amp	17q-Amp	0.0164	1
16p-Amp	Amp_17q12	0.0164	1
ARID1A	MAP4K3	0.0165	1
ZFP36L2	LARP4B	0.0165	1
B2M	BCOR	0.0165	1
BCOR	GMPS	0.0165	1
RPTN	LARP4B	0.0165	1
DIP2B	HLA-A	0.0165	1
DIP2B	GMPS	0.0165	1
RBBP7	LARP4B	0.0165	1
Amp_17q24.1	Amp_20p11.21	0.0165	1
Del_4q22.1	Del_21q11.2	0.0165	1
SOX9	C2orf29	0.0166	1
GGT1	Del_15q11.2	0.0166	1
MVK	L1TD1	0.0166	1
2q-Amp	Amp_1q31.1	0.0166	1
12q-Amp	Amp_5p12	0.0167	1
17p-Del	Del_1p33	0.0167	1
APC	Del_1p36.11	0.0168	1
5q-Del	Del_4p16.1	0.0168	1
BCOR	ALPK2	0.0169	1
BCOR	ASXL1	0.0169	1
ALDH1A3	CTNNB1	0.0169	1
20q-Amp	Del_22q13.32	0.0169	1
1p-Del	Del_14q11.2	0.0169	1
Amp_17q24.1	Del_18q22.1	0.0169	1
7p-Amp	15q-Del	0.017	1
7q-Amp	Amp_2q33.1	0.017	1
20p-Del	Del_8p23.2	0.0171	1
BCOR	BCORL1	0.0172	1
BCL9	DIP2B	0.0172	1
BCL9	LARP4B	0.0172	1
LARP4B	SLC12A6	0.0172	1
Del_6q26	Del_8p23.2	0.0172	1
GRB2	BCORL1	0.0173	1
NLRC4	RSPH3	0.0173	1
RSPH3	SLC12A6	0.0173	1
RNF43	CHUK	0.0174	1
WNT1	GPATCH8	0.0174	1
ALG12	GPATCH8	0.0174	1
8q-Amp	Amp_13q22.1	0.0174	1
GGT1	7p-Amp	0.0175	1
STARD3NL	SLC26A8	0.0175	1
NF1	L1TD1	0.0175	1
FBXW7	RB1	0.0175	1
NR1H3	C2orf29	0.0175	1
SLC26A8	FYN	0.0175	1
SLC26A8	BIRC3	0.0175	1
TOP2B	SETD2	0.0175	1
DCLK2	ALDH1A3	0.0175	1
FKBP9	FYN	0.0175	1
Del_12p13.1	Del_21q21.1	0.0175	1
1p-Del	Del_3p14.2	0.0176	1
CRIPAK	HIST1H1T	0.0177	1
B2M	FBXW7	0.0177	1
13q-Amp	Del_8q11.1	0.0177	1
7p-Amp	Del_5q21.2	0.0177	1
TXNDC2	PLEKHF2	0.0178	1
Amp_20q11.21	Del_1p33	0.0178	1
CDH1	RBBP7	0.0179	1
FBXW7	MGA	0.0179	1
ATXN3L	BCL9	0.0179	1
NLRC4	NEXN	0.0179	1
L1TD1	BCORL1	0.0179	1
RNF43	B2M	0.018	1
PTEN	PRPS1	0.018	1
7q-Amp	Amp_17q24.1	0.018	1
8p-Del	Amp_20p11.21	0.018	1
OR4D10	RLIM	0.0181	1
17q-Amp	Del_8p22	0.0182	1
Amp_20q11.21	Del_10q21.1	0.0182	1
Del_1p13.2	Del_5q23.3	0.0182	1
B2M	RPTN	0.0183	1
B2M	RBPJ	0.0183	1
B2M	RBBP7	0.0183	1
B2M	GMPS	0.0183	1
FAM9A	NF1	0.0183	1
RPTN	RBBP7	0.0183	1
ROS1	NEXN	0.0183	1
RBPJ	RBBP7	0.0183	1
RBBP7	HLA-A	0.0183	1
RBBP7	GMPS	0.0183	1
SOX9	MLH1	0.0184	1
TXNDC2	ATM	0.0184	1
CDH1	HIST1H1T	0.0184	1
RPTN	NF1	0.0185	1
NF1	GMPS	0.0185	1
20q-Amp	20p-Del	0.0185	1
8p-Del	Del_5q23.3	0.0185	1
MAP4K3	CREBBP	0.0186	1
16p-Amp	Amp_20p12.1	0.0186	1
4p-Del	Del_3p14.2	0.0186	1
Amp_20q11.21	Del_4q22.1	0.0186	1
Amp_20q13.12	Del_1p33	0.0186	1
Amp_2q33.1	Amp_8q24.21	0.0187	1
Amp_8q24.21	Amp_19q12	0.0187	1
TP53	8q-Amp	0.0188	1
CRIPAK	CDH1	0.0189	1
ST3GAL6	SETD2	0.0189	1
Del_6q26	Del_12p13.1	0.0189	1
Del_8p23.2	Del_12p13.1	0.0189	1
Amp_8q24.21	Del_18p11.31	0.019	1
Del_1p36.11	Del_3p26.3	0.019	1
PRRG1	IDH1	0.0191	1
7p-Amp	Del_4q35.1	0.0191	1
14q-Del	5q-Del	0.0191	1
Amp_2q33.1	Amp_20p11.21	0.0191	1
CHUK	CTNNB1	0.0192	1
RBBP7	ATM	0.0192	1
20p-Amp	Del_10q21.1	0.0192	1
Del_8p23.2	Del_10q21.1	0.0192	1
MAPK6	Del_16q23.1	0.0193	1
APC	Del_18p11.31	0.0194	1
TXNDC2	ALPK2	0.0194	1
BCOR	TPRKB	0.0194	1
TPRKB	LARP4B	0.0194	1
ALPK2	TOP2B	0.0194	1
16p-Amp	Del_8p22	0.0194	1
20q-Amp	Amp_16p11.2	0.0194	1
Amp_17q12	Del_19p13.3	0.0194	1
PRKDC	ST3GAL6	0.0195	1
ERBB2	CREBBP	0.0195	1
2p-Amp	Amp_20q13.12	0.0195	1
2q-Amp	Amp_20q13.12	0.0195	1
20p-Del	21q-Del	0.0196	1
WNT1	DDX26B	0.0197	1
SMAD4	CREBBP	0.0197	1
TP53	CTNNB1	0.0198	1
FAM123B	SLC26A8	0.0198	1
MLH1	SELPLG	0.0198	1
MLH1	C2orf29	0.0198	1
MLH1	FKBP9	0.0198	1
STARD3NL	ROS1	0.0198	1
21q-Del	Del_2p12	0.0198	1
IQCD	C11orf30	0.0199	1
C11orf30	IFT57	0.0199	1
PIK3R1	BMPR2	0.0199	1
ARID1A	PTCH1	0.02	1
Amp_8p11.21	Del_17p12	0.02	1
MAPK6	PLAGL2	0.0201	1
PLAGL2	SLC26A8	0.0201	1
Amp_20p12.1	Del_17p12	0.0201	1
ATXN3L	FYN	0.0202	1
P2RY13	L1TD1	0.0202	1
NLRC4	SMAD4	0.0202	1
L1TD1	DCLK2	0.0202	1
FYN	NEXN	0.0202	1
Amp_1q31.1	Amp_13q12.2	0.0202	1
Amp_12p13.33	Del_7q31.1	0.0202	1
Del_5q12.1	Del_16p13.3	0.0202	1
DIP2B	RLIM	0.0203	1
ROS1	CDK12	0.0203	1
21q-Del	Del_5q21.2	0.0203	1
Amp_20p11.21	Del_4q35.1	0.0203	1
Del_3p26.3	Del_18p11.31	0.0203	1
PLEKHF2	ASXL1	0.0204	1
NF2	RBPJ	0.0205	1
NF2	GMPS	0.0205	1
FAM9A	PTEN	0.0205	1
THOC7	PTEN	0.0205	1
GRB2	PTEN	0.0205	1
RSPH3	PTEN	0.0205	1
20p-Del	Del_21q21.1	0.0205	1
Del_3p26.3	Del_15q15.2	0.0205	1
8p-Amp	Amp_20q11.21	0.0206	1
FAM123B	DIP2B	0.0207	1
CDH1	WNT1	0.0207	1
MLH1	BCOR	0.0207	1
RBBP7	CDK12	0.0207	1
CDK12	GMPS	0.0207	1
20p-Amp	Amp_2q33.1	0.0207	1
Del_16p13.3	Del_18q22.1	0.0207	1
15q-Del	Del_3p26.3	0.0208	1
Amp_6p21.1	Amp_12p13.33	0.0208	1
Del_2p12	Del_4p16.1	0.0209	1
MAPK6	DDX26B	0.021	1
DDX26B	ALDH1A3	0.021	1
12q-Amp	Amp_1q31.1	0.021	1
Amp_11p15.5	Del_1p13.2	0.021	1
ASXL1	MPHOSPH10	0.0211	1
Del_17q24.3	Del_21q11.2	0.0211	1
RNF43	CTNNB1	0.0212	1
ACVR1B	RSPH3	0.0212	1
Amp_13q12.2	Del_21q21.1	0.0212	1
STARD3NL	RB1	0.0213	1
PTCH1	BIRC3	0.0213	1
NLRC4	MAP4K3	0.0213	1
MAP4K3	SLC12A6	0.0213	1
GGT1	7q-Amp	0.0214	1
7q-Amp	15q-Del	0.0214	1
Amp_1q31.1	Amp_13q22.1	0.0215	1
ERBB2	PTCH1	0.0216	1
MGA	IFT57	0.0217	1
MGA	ZNF486	0.0217	1
IFT57	PTEN	0.0218	1
PTEN	ZNF486	0.0218	1
BMPR2	PTGDR	0.0218	1
Amp_13q12.2	Del_17q24.3	0.0218	1
ERBB2	C11orf30	0.0219	1
Amp_6p21.1	Amp_17q24.1	0.0219	1
ZFP36L2	CREBBP	0.022	1
RPTN	CREBBP	0.022	1
PLAGL2	ROS1	0.022	1
GMPS	CREBBP	0.022	1
5q-Del	Amp_13q12.2	0.022	1
Amp_13q12.2	Amp_19q12	0.022	1
ARID1A	RLIM	0.0221	1
ARID1A	MPHOSPH10	0.0221	1
20p-Amp	Amp_17q24.1	0.0221	1
Amp_17q24.1	Del_8p23.2	0.0221	1
Del_3p26.3	Del_15q21.1	0.0221	1
ZFP36L2	ALG12	0.0222	1
ST3GAL6	SLC12A6	0.0222	1
PLEKHF2	BCORL1	0.0222	1
PLEKHF2	SLC12A6	0.0222	1
PTEN	HLA-A	0.0222	1
C14orf184	GMPS	0.0222	1
Amp_6p21.1	Del_6q26	0.0222	1
Del_3p26.3	Del_6q26	0.0222	1
Del_3p26.3	Del_19p13.3	0.0222	1
ARID1A	Del_12p13.1	0.0223	1
P2RY13	PTEN	0.0223	1
DCLK2	PTEN	0.0223	1
PTEN	BIRC3	0.0223	1
Amp_16p11.2	Del_4p16.1	0.0223	1
RHOA	TOP2B	0.0224	1
IFT57	TOP2B	0.0224	1
Amp_8q24.21	Del_2p12	0.0224	1
FMN2	ASXL1	0.0225	1
12p-Amp	Amp_16p11.2	0.0225	1
Amp_13q12.2	Del_19p13.3	0.0225	1
Del_5q23.3	Del_14q11.2	0.0225	1
TXNDC2	NF1	0.0226	1
BCORL1	CDK12	0.0226	1
Del_3p26.3	Del_21q21.1	0.0226	1
OR4D10	BMPR2	0.0227	1
PTCH1	PTGDR	0.0227	1
18q-Del	Del_8q11.1	0.0227	1
Del_10q23.31	Del_21q21.1	0.0227	1
Amp_8p11.23	Amp_17q24.1	0.0229	1
RNF43	ALG12	0.023	1
CDH1	PRRG1	0.023	1
FBXW7	BCORL1	0.023	1
20p-Amp	8p-Amp	0.023	1
7q-Amp	Del_15q22.33	0.023	1
8p-Del	Del_1p13.2	0.0231	1
Amp_13q22.1	Amp_19q12	0.0231	1
ACVR1B	L1TD1	0.0232	1
STARD3NL	ZBTB20	0.0232	1
STARD3NL	MAP4K3	0.0232	1
ZBTB20	P2RY13	0.0232	1
ZBTB20	NR1H3	0.0232	1
PIK3R1	RBPJ	0.0232	1
PIK3R1	HLA-A	0.0232	1
L1TD1	KDM6A	0.0232	1
DCLK2	MAP4K3	0.0232	1
GPATCH8	IDH1	0.0232	1
MAP4K3	BIRC3	0.0232	1
NEXN	KDM6A	0.0232	1
21q-Del	Del_5q22.2	0.0232	1
Amp_17q12	Del_18q12.2	0.0232	1
7p-Amp	Del_15q22.33	0.0233	1
Amp_8p11.21	Del_5q21.2	0.0233	1
TP53	Del_22q13.32	0.0234	1
ACVR1B	BCOR	0.0235	1
NF2	IQCD	0.0235	1
NF2	ZNF486	0.0235	1
9p-Amp	Del_18q21.2	0.0235	1
ST3GAL6	8p-Amp	0.0236	1
Del_16p13.3	Del_18q21.2	0.0236	1
IFT57	CTNNB1	0.0237	1
Del_2p12	Del_8p23.2	0.0237	1
SOX9	ACVR1B	0.0239	1
7p-Amp	Amp_5p12	0.0239	1
Del_4q22.1	Del_16q23.1	0.0239	1
20p-Amp	Amp_16p11.2	0.024	1
Del_2q22.1	Del_5q21.2	0.024	1
7p-Amp	Del_16p13.3	0.0241	1
7q-Amp	Amp_5p12	0.0241	1
7q-Amp	Del_8p23.2	0.0241	1
Amp_8p11.23	Amp_13q12.2	0.0241	1
Amp_20q11.21	Del_5q21.2	0.0241	1
OR4D10	L1TD1	0.0243	1
OR4D10	NEXN	0.0243	1
ATXN3L	DDX26B	0.0243	1
17q-Amp	Amp_16p11.2	0.0243	1
7p-Amp	Del_12p13.1	0.0243	1
ALG12	8p-Amp	0.0244	1
PLAGL2	IDH1	0.0244	1
C2orf29	SETD2	0.0244	1
17q-Amp	Del_2p12	0.0244	1
9p-Amp	Del_18q12.2	0.0244	1
MVK	C11orf30	0.0245	1
C11orf30	PRRG1	0.0245	1
Amp_6p21.1	Del_4q22.1	0.0245	1
Amp_13q12.13	Del_21q11.2	0.0245	1
Del_15q21.1	Del_21q11.2	0.0245	1
BCOR	C2orf29	0.0246	1
BCOR	ALDH1A3	0.0246	1
APC	NF2	0.0247	1
FMN2	BMPR2	0.0247	1
21q-Del	Del_12p13.1	0.0247	1
Amp_17q24.1	Amp_20q13.12	0.0247	1
WNT1	MPHOSPH10	0.0248	1
2p-Amp	7p-Amp	0.0248	1
2q-Amp	7p-Amp	0.0248	1
7p-Amp	Amp_15q26.1	0.0248	1
ZFP36L2	C2orf29	0.0249	1
ZFP36L2	ALDH1A3	0.0249	1
B2M	MAPK6	0.0249	1
SELPLG	RBBP7	0.0249	1
SELPLG	GMPS	0.0249	1
MAPK6	RBPJ	0.0249	1
MAPK6	RBBP7	0.0249	1
MAPK6	HLA-A	0.0249	1
MAPK6	GMPS	0.0249	1
RBPJ	SLC26A8	0.0249	1
SLC26A8	RBBP7	0.0249	1
HLA-A	ALDH1A3	0.0249	1
ALDH1A3	GMPS	0.0249	1
Amp_11p15.5	Del_22q13.32	0.0249	1
Del_1p36.11	Del_6p25.3	0.0249	1
Del_8q11.1	Del_16p13.3	0.0249	1
TP53	Del_5q23.3	0.025	1
NF2	PRPS1	0.025	1
NF1	ZBTB20	0.025	1
ZNF486	CREBBP	0.025	1
CDH1	RLIM	0.0251	1
CDH1	MPHOSPH10	0.0251	1
SMAD2	BCL9	0.0251	1
13q-Amp	Del_19p13.3	0.0251	1
Del_5q22.2	Del_17q24.3	0.0251	1
PRKDC	RBBP7	0.0252	1
PRKDC	GMPS	0.0252	1
7p-Amp	Del_15q21.1	0.0252	1
Del_1p33	Del_8p22	0.0252	1
CDH1	SLC12A6	0.0253	1
ALPK2	Amp_12p13.33	0.0253	1
BCORL1	GMNN	0.0253	1
12p-Amp	6p-Amp	0.0253	1
18q-Del	Amp_11p15.5	0.0253	1
IFT57	SETD2	0.0254	1
8p-Amp	9p-Amp	0.0254	1
Amp_20q12	Del_5q12.1	0.0254	1
Amp_20q12	Del_10q21.1	0.0255	1
FAM123B	L1TD1	0.0256	1
GRB2	DIP2B	0.0256	1
Amp_20q11.21	Del_5q22.2	0.0256	1
Del_2q22.1	Del_17q24.3	0.0256	1
FAM123B	MGA	0.0257	1
Amp_8p11.21	Amp_17q12	0.0257	1
Amp_17q12	Del_18q22.1	0.0258	1
GGT1	Amp_8q24.21	0.0259	1
Del_1p36.11	Del_15q22.33	0.026	1
17p-Del	Del_2q22.1	0.0261	1
Amp_20p12.1	Del_8p23.2	0.0261	1
SMAD2	P2RY13	0.0263	1
SMAD2	BIRC3	0.0263	1
PTGDR	CREBBP	0.0263	1
15q-Del	Del_6q26	0.0263	1
Amp_10q22.3	Del_1p13.2	0.0263	1
FAM123B	P2RY13	0.0265	1
FAM123B	GPATCH8	0.0265	1
FAM123B	BIRC3	0.0265	1
MLH1	STARD3NL	0.0265	1
MLH1	P2RY13	0.0265	1
MLH1	FYN	0.0265	1
DIP2B	PTEN	0.0265	1
MLH1	PLAGL2	0.0267	1
13q-Amp	20p-Del	0.0267	1
15q-Del	Del_1p36.11	0.0267	1
4q-Del	Del_16q23.1	0.0267	1
22q-Del	Del_5q22.2	0.0268	1
Amp_5p12	Del_8p23.2	0.0268	1
20p-Amp	6p-Amp	0.0269	1
Amp_20q13.12	Del_22q13.32	0.0269	1
HIST1H1T	CTNNB1	0.027	1
22q-Del	Del_12p13.1	0.027	1
Amp_6p21.1	Amp_8q24.21	0.027	1
CRIPAK	BCOR	0.0272	1
ACVR1B	EGR1	0.0272	1
ST3GAL6	PIK3R1	0.0272	1
Del_4p16.1	Del_16q23.1	0.0272	1
Del_5q12.1	Del_10q25.2	0.0272	1
Amp_12p13.33	Del_10q25.2	0.0273	1
TP53	7q-Amp	0.0274	1
NF2	RLIM	0.0274	1
NF2	MPHOSPH10	0.0274	1
FBXW7	RLIM	0.0274	1
ALPK2	ZNF486	0.0274	1
WNT1	SLC26A8	0.0275	1
WNT1	ALDH1A3	0.0275	1
MVK	TOP2B	0.0275	1
C2orf29	12q-Amp	0.0275	1
Amp_10q22.3	Del_19p13.3	0.0275	1
FMN2	LARP4B	0.0276	1
MAPK6	PTCH1	0.0276	1
ST3GAL6	GRB2	0.0276	1
16q-Amp	Amp_8p11.21	0.0276	1
20q-Amp	Amp_2q33.1	0.0276	1
4q-Del	Del_3p14.2	0.0276	1
GGT1	Del_8p23.2	0.0277	1
ERBB2	CTNNB1	0.0277	1
DDX26B	MAP4K3	0.0277	1
CDK12	CTNNB1	0.0277	1
8p-Amp	Amp_20q13.12	0.0277	1
RHOA	NLRC4	0.0278	1
RHOA	SLC12A6	0.0278	1
BCL9	ZNF486	0.0278	1
NLRC4	ZNF486	0.0278	1
15q-Del	Del_21q11.2	0.0278	1
1p-Del	Amp_20q12	0.0278	1
21q-Del	Del_10q25.2	0.0279	1
22q-Del	Amp_20q13.12	0.028	1
Amp_20p11.21	Del_10q21.1	0.028	1
Del_2q22.1	Del_10q21.1	0.028	1
ZFP36L2	BMPR2	0.0282	1
ZFP36L2	Del_10q25.2	0.0282	1
SMAD2	PRKDC	0.0282	1
PRKDC	IFT57	0.0282	1
1p-Del	20p-Del	0.0282	1
8p-Amp	Amp_17q12	0.0283	1
14q-Del	Del_5q23.3	0.0283	1
WNT1	CTNNB1	0.0284	1
MGA	PRRG1	0.0284	1
C14orf184	CTNNB1	0.0284	1
NF2	KDM6A	0.0285	1
8p-Del	Del_3q26.31	0.0285	1
Amp_20p12.1	Del_15q11.2	0.0285	1
Del_4q35.1	Del_16q23.1	0.0285	1
TP53	Del_15q22.33	0.0286	1
Del_19p13.3	Del_21q21.1	0.0286	1
B2M	NEXN	0.0287	1
FMN2	TPRKB	0.0287	1
RPTN	L1TD1	0.0287	1
RPTN	NEXN	0.0287	1
P2RY13	PRPS1	0.0287	1
ASXL1	BCORL1	0.0287	1
RBPJ	L1TD1	0.0287	1
RBPJ	NEXN	0.0287	1
L1TD1	HLA-A	0.0287	1
NEXN	GMPS	0.0287	1
8q-Amp	18p-Del	0.0287	1
Del_3q26.31	Del_8q11.1	0.0287	1
16p-Amp	14q-Del	0.0288	1
Amp_5p12	Amp_8p11.21	0.0288	1
APC	CTNNB1	0.0289	1
MLH1	BCORL1	0.0289	1
ZFP36L2	CTNNB1	0.029	1
HLA-A	CTNNB1	0.029	1
13q-Amp	Amp_19q12	0.029	1
6p-Amp	Amp_8p11.23	0.029	1
Del_16p13.3	Del_21q21.1	0.029	1
RNF43	MAPK6	0.0291	1
CDH1	GRB2	0.0291	1
PRKDC	PTGDR	0.0291	1
NF1	P2RY13	0.0291	1
NF1	BIRC3	0.0291	1
NF1	16q-Amp	0.0291	1
CHUK	PLAGL2	0.0291	1
PLAGL2	C11orf30	0.0291	1
RLIM	C2orf29	0.0291	1
MPHOSPH10	SLC26A8	0.0291	1
MPHOSPH10	ALDH1A3	0.0291	1
1p-Del	Del_16p13.3	0.0291	1
4p-Del	Del_16p13.3	0.0291	1
CHUK	BCL9	0.0292	1
CHUK	SLC12A6	0.0292	1
NLRC4	C11orf30	0.0292	1
Del_1p33	Del_6q26	0.0293	1
BCOR	NEXN	0.0294	1
ATXN3L	LARP4B	0.0294	1
DIP2B	NEXN	0.0294	1
Del_1p13.2	Del_8p22	0.0294	1
ARID1A	NR1H3	0.0295	1
ARID1A	FYN	0.0295	1
RNF43	IQCD	0.0295	1
RNF43	IFT57	0.0295	1
BMPR2	HIST1H1T	0.0296	1
STARD3NL	CHUK	0.0297	1
CHUK	BIRC3	0.0297	1
C11orf30	FYN	0.0297	1
ACVR1B	MGA	0.0298	1
Del_5q12.1	Del_15q15.2	0.0298	1
TP53	PTEN	0.0299	1
20p-Amp	Amp_6p21.1	0.0299	1
NF1	VCX2	0.03	1
Del_2p12	Del_8p22	0.03	1
Del_10q25.2	Del_21q21.1	0.0301	1
SETD2	NEXN	0.0302	1
GGT1	Amp_12p13.33	0.0303	1
ATXN3L	ALG12	0.0303	1
5q-Del	Amp_13q12.13	0.0303	1
Amp_2q33.1	Amp_13q12.13	0.0303	1
Amp_13q12.13	Amp_19q12	0.0303	1
20q-Amp	8p-Amp	0.0307	1
MGA	MAP4K3	0.0309	1
PRRG1	HIST1H1T	0.0309	1
ACVR1B	CREBBP	0.031	1
RPTN	ERBB2	0.031	1
16p-Amp	Amp_17q24.1	0.031	1
20q-Amp	Del_1p33	0.0311	1
5q-Del	Del_14q11.2	0.0311	1
Amp_2q33.1	Del_14q11.2	0.0311	1
Del_1p33	Del_8p23.2	0.0311	1
DIP2B	LARP4B	0.0312	1
SMAD2	OR4D10	0.0314	1
OR4D10	RB1	0.0314	1
20p-Amp	Del_14q11.2	0.0314	1
8p-Amp	Amp_20q12	0.0314	1
Amp_11p15.5	Amp_20p11.21	0.0315	1
Amp_17q12	Del_18q21.2	0.0316	1
16p-Amp	Del_4p16.1	0.0317	1
22q-Del	Del_8q11.1	0.0317	1
Del_1p33	Del_5q22.2	0.0318	1
TPRKB	Amp_1q31.1	0.0319	1
BCOR	SMAD4	0.032	1
GGT1	Del_21q21.1	0.032	1
20p-Del	Del_1p33	0.0321	1
TP53	4p-Del	0.0322	1
RHOA	RSPH3	0.0322	1
IQCD	RSPH3	0.0322	1
GRB2	ZNF486	0.0322	1
PLAGL2	PTEN	0.0323	1
MLH1	ZBTB20	0.0324	1
17q-Amp	Amp_20p11.21	0.0324	1
Amp_15q26.1	Amp_17q12	0.0324	1
OR4D10	PTGDR	0.0325	1
CHUK	PTCH1	0.0325	1
NLRC4	BMPR2	0.0325	1
7q-Amp	Del_5q22.2	0.0326	1
BCOR	EGR1	0.0327	1
NF2	MVK	0.0327	1
EGR1	ST3GAL6	0.0327	1
EGR1	DIP2B	0.0327	1
ZBTB20	RBPJ	0.0327	1
ZBTB20	RBBP7	0.0327	1
PLEKHF2	DIP2B	0.0327	1
PLEKHF2	LARP4B	0.0327	1
RBPJ	MAP4K3	0.0327	1
RBBP7	MAP4K3	0.0327	1
16p-Amp	17q-Amp	0.0327	1
13q-Amp	8p-Del	0.0328	1
5q-Del	Del_10q21.1	0.0328	1
Amp_5p12	Amp_12p13.33	0.0328	1
Del_8p22	Del_10q21.1	0.0328	1
18q-Del	Amp_16p11.2	0.0329	1
ATXN3L	ALPK2	0.033	1
Amp_2q33.1	Amp_17q12	0.033	1
Amp_17q12	Del_3q26.31	0.033	1
Del_4q22.1	Del_10q25.2	0.033	1
Del_17q24.3	Del_21q21.1	0.033	1
VCX2	Del_5q21.2	0.0331	1
12p-Amp	Amp_20p12.1	0.0331	1
13q-Amp	2p-Amp	0.0331	1
MVK	SETD2	0.0332	1
4q-Del	Amp_20q12	0.0332	1
5q-Del	Amp_8p11.23	0.0332	1
Amp_6p21.1	Amp_16p11.2	0.0332	1
Amp_8p11.23	Amp_19q12	0.0332	1
Amp_13q12.2	Del_10q21.1	0.0332	1
Amp_20q12	Del_1p13.2	0.0332	1
TXNDC2	NR1H3	0.0333	1
STARD3NL	TOP2B	0.0333	1
NR1H3	TOP2B	0.0333	1
TOP2B	FYN	0.0333	1
TOP2B	GPATCH8	0.0333	1
TOP2B	BIRC3	0.0333	1
16q-Amp	Del_19p13.3	0.0333	1
Del_2p12	Del_21q21.1	0.0333	1
ATXN3L	RLIM	0.0335	1
1p-Del	Del_3q26.31	0.0335	1
CDH1	C11orf30	0.0337	1
SELPLG	MAPK6	0.0337	1
MAPK6	FKBP9	0.0337	1
SLC26A8	ALDH1A3	0.0337	1
FKBP9	ALDH1A3	0.0337	1
TXNDC2	NLRC4	0.0338	1
ZNF486	Del_16q23.1	0.034	1
7p-Amp	Amp_6p21.1	0.034	1
8q-Amp	Amp_12p13.33	0.034	1
20p-Del	Del_16p13.3	0.034	1
21q-Del	Del_14q11.2	0.034	1
Amp_20p11.21	Del_15q15.2	0.034	1
ZFP36L2	ROS1	0.0341	1
CDH1	FKBP9	0.0341	1
5q-Del	Amp_20q11.21	0.0341	1
Amp_5p12	Del_2p12	0.0341	1
BCL9	PRRG1	0.0342	1
Amp_16p11.2	Amp_17q12	0.0342	1
PTGDR	ATM	0.0343	1
PIK3R1	SMAD4	0.0344	1
HIST1H1T	Del_1p33	0.0344	1
MLH1	THOC7	0.0346	1
15q-Del	5q-Del	0.0346	1
Amp_13q12.2	Amp_17q12	0.0346	1
DIP2B	MAP4K3	0.0347	1
Del_2p12	Del_4q22.1	0.0347	1
TP53	Del_4q35.1	0.0348	1
7p-Amp	5q-Del	0.0348	1
8q-Amp	Amp_19q12	0.0348	1
CRIPAK	NF2	0.035	1
CRIPAK	MGA	0.0351	1
MVK	CTNNB1	0.0351	1
IQCD	PTCH1	0.0351	1
IQCD	RB1	0.0351	1
PTCH1	IFT57	0.0351	1
IFT57	RB1	0.0351	1
RB1	ZNF486	0.0351	1
Amp_13q12.2	Del_1p36.11	0.0351	1
TP53	Amp_17q24.1	0.0352	1
GGT1	16q-Amp	0.0352	1
STARD3NL	HIST1H1T	0.0352	1
DCLK2	HIST1H1T	0.0352	1
OR4D10	CHUK	0.0354	1
20p-Amp	Del_8p23.2	0.0355	1
Amp_11p15.5	Amp_17q12	0.0355	1
Del_5q21.2	Del_17q24.3	0.0356	1
NF2	ALDH1A3	0.0357	1
12p-Amp	Del_7q31.1	0.0357	1
4q-Del	Del_7q31.1	0.0357	1
20q-Amp	4q-Del	0.0358	1
Del_6p25.3	Del_10q23.31	0.0361	1
Del_10q23.31	Del_19p13.3	0.0361	1
2p-Amp	Amp_20p12.1	0.0362	1
2q-Amp	Amp_20p12.1	0.0362	1
Del_5q12.1	Del_21q11.2	0.0362	1
CRIPAK	Del_12p13.1	0.0363	1
PIK3R1	IFT57	0.0363	1
ERBB2	ATM	0.0364	1
RBPJ	PTGDR	0.0365	1
HLA-A	PRPS1	0.0365	1
GMPS	PTGDR	0.0365	1
SETD2	KDM6A	0.0366	1
Amp_10q22.3	Del_22q13.32	0.0368	1
MAP4K3	SETD2	0.0369	1
SOX9	C11orf30	0.037	1
SMAD2	RBBP7	0.037	1
Del_8p23.2	Del_16p13.3	0.037	1
GGT1	Del_8p22	0.0371	1
MAPK6	PIK3R1	0.0371	1
FAM9A	MVK	0.0371	1
FAM9A	PRRG1	0.0371	1
GRB2	PRRG1	0.0371	1
PIK3R1	C2orf29	0.0371	1
PIK3R1	FKBP9	0.0371	1
PIK3R1	Del_16p13.3	0.0371	1
17q-Amp	Amp_13q12.2	0.0371	1
FMN2	SLC12A6	0.0372	1
20p-Del	Amp_8p11.21	0.0372	1
Amp_20q12	Del_5q21.2	0.0372	1
SMAD2	MGA	0.0373	1
Del_5q12.1	Del_12p13.1	0.0373	1
OR4D10	FBXW7	0.0374	1
1p-Del	Del_5q21.2	0.0374	1
22q-Del	Amp_20q11.21	0.0374	1
Del_16p13.3	Del_18q12.2	0.0374	1
ROS1	VCX2	0.0375	1
21q-Del	Del_4q22.1	0.0375	1
Del_5q21.2	Del_19p13.3	0.0375	1
ERBB2	RLIM	0.0377	1
C14orf184	ATM	0.0377	1
4p-Del	Amp_16p11.2	0.0377	1
Del_8p22	Del_21q21.1	0.0377	1
FBXW7	ALPK2	0.0378	1
PTCH1	HIST1H1T	0.0379	1
RB1	HIST1H1T	0.0379	1
Amp_5p12	Amp_13q22.1	0.0379	1
CDH1	PIK3R1	0.038	1
PTCH1	C14orf184	0.038	1
RB1	C14orf184	0.038	1
RHOA	ST3GAL6	0.0381	1
ST3GAL6	ZNF486	0.0381	1
PLEKHF2	IFT57	0.0381	1
PTCH1	L1TD1	0.0381	1
7p-Amp	8p-Del	0.0381	1
Amp_13q12.13	Del_1p36.11	0.0381	1
Del_6q26	Del_15q11.2	0.0381	1
SELPLG	CREBBP	0.0382	1
ZBTB20	MPHOSPH10	0.0382	1
15q-Del	Del_5q22.2	0.0382	1
Amp_13q12.13	Del_21q21.1	0.0382	1
Amp_13q22.1	Del_8q11.1	0.0383	1
NF1	ALDH1A3	0.0384	1
MAPK6	L1TD1	0.0387	1
FAM9A	BMPR2	0.0387	1
ATXN3L	C2orf29	0.0387	1
C2orf29	L1TD1	0.0387	1
C2orf29	NEXN	0.0387	1
FKBP9	NEXN	0.0387	1
Del_2q22.1	Del_10q25.2	0.0387	1
PLEKHF2	CDK12	0.0388	1
9p-Amp	Del_18p11.31	0.0388	1
TP53	Del_5q21.2	0.0389	1
ATM	GMNN	0.0389	1
13q-Amp	Del_1p36.11	0.0389	1
Del_6q26	Del_15q22.33	0.0389	1
Del_15q22.33	Del_19p13.3	0.0389	1
PRKDC	MVK	0.039	1
20p-Amp	Amp_8p11.23	0.039	1
8p-Amp	Amp_2q33.1	0.039	1
20p-Del	Del_21q11.2	0.039	1
P2RY13	Del_3p14.2	0.0392	1
Del_6p25.3	Del_17p12	0.0393	1
2p-Amp	Amp_19q12	0.0395	1
2q-Amp	Amp_19q12	0.0395	1
6p-Amp	Amp_19q12	0.0395	1
Amp_2q33.1	Amp_15q26.1	0.0395	1
Amp_15q26.1	Amp_19q12	0.0395	1
TP53	15q-Del	0.0396	1
TXNDC2	DDX26B	0.0396	1
WNT1	CHUK	0.0396	1
WNT1	C11orf30	0.0396	1
1p-Del	Amp_20q13.12	0.0397	1
OR4D10	TPRKB	0.0398	1
DDX26B	PTEN	0.0398	1
Del_10q21.1	Del_21q21.1	0.0398	1
ARID1A	ATXN3L	0.04	1
Amp_8q24.21	Del_5q21.2	0.04	1
8q-Amp	Del_18p11.31	0.0402	1
FBXW7	C2orf29	0.0403	1
ACVR1B	ASXL1	0.0404	1
MGA	ASXL1	0.0404	1
12q-Amp	9p-Amp	0.0404	1
20p-Amp	Del_8p22	0.0404	1
Del_8q11.1	Del_10q23.31	0.0404	1
FMN2	ZBTB20	0.0405	1
RLIM	PTGDR	0.0406	1
MPHOSPH10	PRPS1	0.0406	1
Del_12p13.1	Del_17q24.3	0.0406	1
12p-Amp	Amp_6p21.1	0.0407	1
4q-Del	Del_3p26.3	0.0407	1
Del_4p16.1	Del_6q26	0.0407	1
APC	OR4D10	0.0408	1
BCOR	RHOA	0.0408	1
BCOR	ZNF486	0.0408	1
FMN2	RSPH3	0.0408	1
GGT1	Del_18p11.31	0.0408	1
RHOA	LARP4B	0.0408	1
IQCD	LARP4B	0.0408	1
DIP2B	ZNF486	0.0408	1
Del_16p13.3	Del_22q13.32	0.0408	1
7q-Amp	Amp_6p21.1	0.0409	1
MVK	PTEN	0.041	1
MVK	8p-Amp	0.0411	1
ATXN3L	SMAD4	0.0412	1
BCL9	P2RY13	0.0412	1
BCL9	DCLK2	0.0412	1
BCL9	FYN	0.0412	1
P2RY13	NLRC4	0.0412	1
NLRC4	BIRC3	0.0412	1
SMAD4	NEXN	0.0412	1
SLC12A6	BIRC3	0.0412	1
ACVR1B	MVK	0.0415	1
PRRG1	KDM6A	0.0415	1
B2M	CHUK	0.0417	1
CHUK	RBBP7	0.0417	1
C11orf30	RBPJ	0.0417	1
16p-Amp	Amp_6p21.1	0.0417	1
Amp_6p21.1	Del_8q11.1	0.0417	1
Amp_17q24.1	Del_2q22.1	0.0417	1
16q-Amp	Amp_8q24.21	0.0418	1
FAM9A	CTNNB1	0.042	1
Amp_16p11.2	Amp_17q24.1	0.0421	1
P2RY13	SETD2	0.0422	1
PCBP1	SETD2	0.0422	1
DCLK2	SETD2	0.0422	1
FYN	SETD2	0.0422	1
GPATCH8	SETD2	0.0422	1
STARD3NL	FAM9A	0.0423	1
STARD3NL	RSPH3	0.0423	1
OR4D10	NF1	0.0423	1
FAM9A	P2RY13	0.0423	1
FAM9A	GPATCH8	0.0423	1
THOC7	BIRC3	0.0423	1
THOC7	16q-Amp	0.0423	1
PLAGL2	KDM6A	0.0423	1
PLAGL2	Del_16q23.1	0.0423	1
RSPH3	FYN	0.0423	1
Del_2p12	Del_16q23.1	0.0423	1
PRKDC	PLAGL2	0.0424	1
14q-Del	20p-Del	0.0424	1
Amp_5p12	Del_8p22	0.0424	1
Del_3p14.2	Del_21q11.2	0.0425	1
Amp_20p11.21	Del_4p16.1	0.0426	1
12p-Amp	9p-Amp	0.0427	1
Del_1p13.2	Del_10q21.1	0.0427	1
ALG12	TOP2B	0.0428	1
ACVR1B	FBXW7	0.0431	1
CDH1	ST3GAL6	0.0431	1
Amp_20p11.21	Del_14q11.2	0.0431	1
Del_5q22.2	Del_21q21.1	0.0431	1
Amp_20q12	Del_22q13.32	0.0432	1
8p-Del	Del_1p33	0.0435	1
Amp_2q33.1	Amp_20q12	0.0435	1
13q-Amp	Amp_8p11.23	0.0437	1
EGR1	MVK	0.0438	1
MVK	ST3GAL6	0.0438	1
8q-Amp	Amp_16p11.2	0.0438	1
NF2	DCLK2	0.0439	1
NF2	FYN	0.0439	1
BCL9	CTNNB1	0.0439	1
16p-Amp	Del_14q11.2	0.0439	1
MAPK6	ZBTB20	0.044	1
LARP4B	CTNNB1	0.044	1
Del_3p14.2	Del_4p16.1	0.044	1
20q-Amp	Del_4q22.1	0.0441	1
SOX9	CDK12	0.0442	1
TXNDC2	ROS1	0.0442	1
ZFP36L2	RB1	0.0443	1
B2M	RB1	0.0443	1
RHOA	ZNF486	0.0443	1
FBXW7	CTNNB1	0.0443	1
ATXN3L	L1TD1	0.0443	1
IQCD	ZNF486	0.0443	1
RBBP7	RB1	0.0443	1
STARD3NL	SMAD4	0.0444	1
P2RY13	SMAD4	0.0444	1
NR1H3	SMAD4	0.0444	1
4p-Del	Del_16q23.1	0.0444	1
Amp_8q24.21	Del_5q23.3	0.0444	1
B2M	TPRKB	0.0446	1
RPTN	TPRKB	0.0446	1
TPRKB	RBBP7	0.0446	1
GMPS	HIST1H1T	0.0446	1
7q-Amp	Amp_1q31.1	0.0447	1
C14orf184	Amp_8p11.21	0.0448	1
12q-Amp	20p-Amp	0.0448	1
20p-Amp	9p-Amp	0.0448	1
Amp_11p15.5	Del_18q12.2	0.0448	1
Amp_20q13.12	Del_5q12.1	0.0448	1
Del_10q23.31	Del_21q11.2	0.0448	1
FAM123B	B2M	0.0449	1
B2M	MLH1	0.0449	1
MLH1	RPTN	0.0449	1
7p-Amp	Del_5q22.2	0.0449	1
SELPLG	PRPS1	0.045	1
MAPK6	PRPS1	0.045	1
SLC26A8	PRPS1	0.045	1
SLC26A8	PTGDR	0.045	1
FKBP9	PTGDR	0.045	1
ALDH1A3	PRPS1	0.045	1
PRPS1	Del_16p13.3	0.045	1
Amp_13q12.13	Del_1p33	0.045	1
FAM9A	FBXW7	0.0451	1
FBXW7	PIK3R1	0.0451	1
SELPLG	ERBB2	0.0452	1
MAPK6	ERBB2	0.0452	1
Amp_1q31.1	Del_16p13.3	0.0452	1
Amp_17q24.1	Del_18q21.2	0.0452	1
GGT1	Del_21q11.2	0.0453	1
STARD3NL	ASXL1	0.0453	1
NR1H3	ALPK2	0.0453	1
ALPK2	DCLK2	0.0453	1
ASXL1	GPATCH8	0.0453	1
16q-Amp	Amp_17q12	0.0453	1
Amp_16p11.2	Del_18p11.31	0.0453	1
Del_2q22.1	Del_21q21.1	0.0453	1
Del_3p14.2	Del_17q24.3	0.0453	1
ARID1A	FMN2	0.0454	1
TP53	Del_19p13.3	0.0454	1
ALPK2	PRPS1	0.0454	1
ALPK2	PTGDR	0.0454	1
Del_5q22.2	Del_21q11.2	0.0454	1
NF2	NEXN	0.0455	1
PIK3R1	NEXN	0.0457	1
BCOR	NF1	0.0458	1
NF1	IQCD	0.0458	1
NF1	ZNF486	0.0458	1
Amp_8p11.23	Amp_13q22.1	0.0458	1
BCOR	CREBBP	0.046	1
7p-Amp	Del_14q11.2	0.046	1
RNF43	FAM123B	0.0462	1
SOX9	NF1	0.0463	1
WNT1	NF1	0.0463	1
NF1	ALG12	0.0463	1
13q-Amp	Del_17q24.3	0.0463	1
Amp_11p15.5	Del_17p12	0.0463	1
RBPJ	Amp_8p11.23	0.0464	1
FYN	CREBBP	0.0465	1
B2M	TXNDC2	0.0466	1
B2M	TOP2B	0.0466	1
TXNDC2	RPTN	0.0466	1
8p-Del	Amp_13q22.1	0.0466	1
Amp_20p12.1	Del_5q21.2	0.0467	1
TP53	14q-Del	0.0468	1
Amp_13q22.1	Amp_17q24.1	0.0468	1
Amp_20p12.1	Del_2q22.1	0.0468	1
BCOR	CHUK	0.047	1
CHUK	DIP2B	0.047	1
CHUK	LARP4B	0.047	1
1p-Del	8p-Del	0.047	1
APC	17p-Del	0.0471	1
RNF43	FBXW7	0.0471	1
Amp_8p11.23	Del_18q12.2	0.0471	1
FAM123B	ST3GAL6	0.0472	1
MLH1	PLEKHF2	0.0472	1
20p-Del	Amp_13q12.13	0.0472	1
ZBTB20	8p-Amp	0.0474	1
17q-Amp	8p-Amp	0.0474	1
SOX9	HLA-A	0.0476	1
OR4D10	GRB2	0.0477	1
TP53	5q-Del	0.0478	1
TP53	Del_3q26.31	0.0478	1
Amp_20q11.21	Del_22q13.32	0.0478	1
HIST1H1T	Del_1p13.2	0.048	1
4p-Del	Del_7q31.1	0.048	1
4q-Del	Del_6q26	0.0481	1
Del_2p12	Del_17q24.3	0.0481	1
Del_19p13.3	Del_21q11.2	0.0481	1
IFT57	CDK12	0.0482	1
Amp_13q12.13	Del_8q11.1	0.0482	1
CHUK	MPHOSPH10	0.0484	1
C11orf30	RLIM	0.0484	1
4q-Del	Amp_20q11.21	0.0484	1
Amp_20q11.21	Del_1p13.2	0.0484	1
RNF43	STARD3NL	0.0486	1
RNF43	DCLK2	0.0486	1
RNF43	BIRC3	0.0486	1
MGA	PTEN	0.0486	1
CREBBP	Del_3q26.31	0.0486	1
16q-Amp	4p-Del	0.0486	1
2p-Amp	Amp_20p11.21	0.0486	1
2q-Amp	Amp_20p11.21	0.0486	1
6p-Amp	Amp_20p11.21	0.0486	1
5q-Del	Del_15q22.33	0.0486	1
7p-Amp	Del_15q11.2	0.0487	1
Del_3p14.2	Del_18q22.1	0.0487	1
Amp_12p13.33	Amp_16p11.2	0.0488	1
OR4D10	NLRC4	0.0489	1
OR4D10	SLC12A6	0.0489	1
EGR1	BMPR2	0.0491	1
VCX2	7q-Amp	0.0494	1
Del_1p33	Del_16p13.3	0.0494	1
APC	RB1	0.0495	1
FAM123B	CHUK	0.0495	1
ATXN3L	PRPS1	0.0495	1
ATXN3L	PTGDR	0.0495	1
L1TD1	PTGDR	0.0495	1
NEXN	PTGDR	0.0495	1
7q-Amp	Del_15q15.2	0.0495	1
Amp_2q33.1	Del_7q31.1	0.0495	1
Amp_20p11.21	Del_19p13.3	0.0495	1
Del_3q26.31	Del_7q31.1	0.0495	1
IFT57	ROS1	0.0496	1
ROS1	ZNF486	0.0496	1
BCOR	MVK	0.0497	1
SMAD2	MAPK6	0.0497	1
SMAD2	ALDH1A3	0.0497	1
WNT1	BCORL1	0.0497	1
ALG12	BCORL1	0.0497	1
NLRC4	C14orf184	0.0497	1
Amp_8p11.21	Del_5q22.2	0.0497	1
Del_14q11.2	Del_21q11.2	0.0497	1
Amp_2q33.1	Amp_8p11.21	0.0498	1
Amp_8p11.21	Amp_19q12	0.0498	1
CRIPAK	BMPR2	0.0499	1
ACVR1B	STARD3NL	0.0499	1
ACVR1B	BIRC3	0.0499	1
STARD3NL	EGR1	0.0499	1
EGR1	P2RY13	0.0499	1
P2RY13	ST3GAL6	0.0499	1
P2RY13	PLEKHF2	0.0499	1
ST3GAL6	NR1H3	0.0499	1
ST3GAL6	BIRC3	0.0499	1
PLEKHF2	NR1H3	0.0499	1
PLEKHF2	GPATCH8	0.0499	1
FYN	KDM6A	0.0499	1
BIRC3	KDM6A	0.0499	1
APC	STARD3NL	0.05	1
APC	PCBP1	0.05	1
SMAD2	CDK12	0.0501	1
17q-Amp	Amp_13q12.13	0.0501	1
Amp_5p12	Amp_13q12.13	0.0501	1
MLH1	BMPR2	0.0503	1
Amp_13q12.13	Del_3p26.3	0.0503	1
ATXN3L	MAP4K3	0.0504	1
ZBTB20	L1TD1	0.0504	1
ZBTB20	NEXN	0.0504	1
17q-Amp	Del_3q26.31	0.0504	1
20q-Amp	22q-Del	0.0504	1
Del_8p23.2	Del_21q11.2	0.0504	1
16q-Amp	8q-Amp	0.0505	1
MVK	ZNF486	0.0509	1
IQCD	PRRG1	0.0509	1
PRRG1	ZNF486	0.0509	1
SMAD4	SLC12A6	0.0509	1
ZBTB20	PTCH1	0.051	1
RB1	MAP4K3	0.051	1
21q-Del	Del_10q23.31	0.051	1
Del_5q21.2	Del_10q23.31	0.051	1
TP53	Del_15q15.2	0.0511	1
PTCH1	PRRG1	0.0511	1
2q-Amp	Amp_6p21.1	0.0512	1
Amp_6p21.1	Amp_15q26.1	0.0512	1
Amp_5p12	Del_22q13.32	0.0515	1
ARID1A	PRPS1	0.0517	1
ARID1A	Del_7q31.1	0.0517	1
ATXN3L	Del_22q13.32	0.0517	1
Amp_8q24.21	Amp_16p11.2	0.0519	1
TP53	C14orf184	0.052	1
16q-Amp	8p-Amp	0.052	1
IQCD	20p-Del	0.0522	1
13q-Amp	Del_1p13.2	0.0522	1
18q-Del	Amp_17q24.1	0.0522	1
12q-Amp	Amp_6p21.1	0.0523	1
9p-Amp	Amp_6p21.1	0.0523	1
Amp_8q24.21	Del_3q26.31	0.0523	1
7p-Amp	Del_5q23.3	0.0525	1
2p-Amp	Amp_13q12.2	0.0526	1
NF2	FAM9A	0.0527	1
CHUK	PTEN	0.0527	1
FBXW7	SMAD4	0.0528	1
CHUK	SETD2	0.0529	1
PLEKHF2	ATM	0.0531	1
12q-Amp	8q-Amp	0.0532	1
FAM9A	HLA-A	0.0534	1
FAM9A	GMPS	0.0534	1
GRB2	RBPJ	0.0534	1
GRB2	RBBP7	0.0534	1
C2orf29	CTNNB1	0.0535	1
SLC26A8	CTNNB1	0.0535	1
FKBP9	CTNNB1	0.0535	1
Del_3p14.2	Del_8p22	0.0535	1
Amp_1q31.1	Amp_2q33.1	0.0536	1
Amp_17q24.1	Del_3q26.31	0.0536	1
BCOR	PRKDC	0.0537	1
Amp_12p13.33	Del_12p13.1	0.0538	1
2q-Amp	Amp_13q22.1	0.0539	1
TXNDC2	LARP4B	0.054	1
BCOR	TOP2B	0.054	1
MPHOSPH10	TOP2B	0.0541	1
B2M	FMN2	0.0542	1
FMN2	GMPS	0.0542	1
NF2	BCL9	0.0544	1
ARID1A	ZFP36L2	0.0545	1
ARID1A	RBPJ	0.0545	1
ARID1A	RBBP7	0.0545	1
Amp_13q12.13	Amp_17q12	0.0545	1
GGT1	SELPLG	0.0549	1
TPRKB	C2orf29	0.0549	1
ALDH1A3	HIST1H1T	0.0549	1
FBXW7	RBBP7	0.055	1
FBXW7	HLA-A	0.055	1
C11orf30	CTNNB1	0.0552	1
ARID1A	RHOA	0.0553	1
ARID1A	IQCD	0.0553	1
20p-Del	Del_12p13.1	0.0553	1
ZFP36L2	MGA	0.0554	1
B2M	MGA	0.0554	1
FMN2	PLEKHF2	0.0554	1
MGA	RBPJ	0.0554	1
CRIPAK	Amp_1q31.1	0.0555	1
Amp_13q22.1	Del_5q12.1	0.0556	1
MAPK6	CHUK	0.0558	1
CHUK	C2orf29	0.0558	1
C11orf30	ALDH1A3	0.0558	1
CDH1	PTGDR	0.0559	1
ACVR1B	SLC12A6	0.056	1
Amp_20p12.1	Del_4q35.1	0.056	1
EGR1	DDX26B	0.0562	1
ST3GAL6	DDX26B	0.0562	1
PLEKHF2	DDX26B	0.0562	1
22q-Del	Amp_20q12	0.0562	1
Amp_20q12	Del_4q22.1	0.0562	1
7q-Amp	Del_15q21.1	0.0563	1
17p-Del	Del_3p14.2	0.0563	1
Amp_8p11.21	Del_18p11.31	0.0563	1
APC	SMAD4	0.0564	1
FAM123B	MPHOSPH10	0.0564	1
16p-Amp	Amp_8p11.21	0.0564	1
21q-Del	Del_4p16.1	0.0564	1
Amp_1q31.1	Amp_20q13.12	0.0564	1
APC	ATM	0.0565	1
TP53	Amp_8p11.21	0.0565	1
PTEN	MAP4K3	0.0566	1
SMAD2	ATXN3L	0.0568	1
SMAD2	NEXN	0.0568	1
5q-Del	Del_12p13.1	0.0568	1
Amp_20q13.12	Del_1p13.2	0.0568	1
Del_3q26.31	Del_8p23.2	0.0568	1
ACVR1B	WNT1	0.057	1
WNT1	KDM6A	0.057	1
ALG12	KDM6A	0.057	1
ALG12	Del_16q23.1	0.057	1
21q-Del	5q-Del	0.057	1
ZFP36L2	NLRC4	0.0572	1
ZFP36L2	SLC12A6	0.0572	1
B2M	BCL9	0.0572	1
B2M	NLRC4	0.0572	1
B2M	BCORL1	0.0572	1
B2M	SLC12A6	0.0572	1
RPTN	NLRC4	0.0572	1
BCL9	RBBP7	0.0572	1
RBPJ	BCORL1	0.0572	1
RBBP7	BCORL1	0.0572	1
18p-Del	Amp_8p11.21	0.0572	1
TPRKB	SETD2	0.0573	1
SETD2	HIST1H1T	0.0573	1
20p-Del	Del_5q21.2	0.0573	1
Del_3p14.2	Del_6q26	0.0573	1
20q-Amp	1p-Del	0.0574	1
FBXW7	NLRC4	0.0575	1
MLH1	FMN2	0.0577	1
Amp_12p13.33	Amp_13q22.1	0.0577	1
ZFP36L2	ATM	0.0579	1
STARD3NL	IFT57	0.0579	1
IQCD	BIRC3	0.0579	1
IFT57	DCLK2	0.0579	1
IFT57	GPATCH8	0.0579	1
IFT57	BIRC3	0.0579	1
RBPJ	ATM	0.0579	1
FYN	ZNF486	0.0579	1
PIK3R1	KDM6A	0.058	1
CDH1	MAP4K3	0.0581	1
FAM9A	PTCH1	0.0581	1
7q-Amp	20p-Del	0.0581	1
SOX9	RSPH3	0.0583	1
Del_2q22.1	Del_5q23.3	0.0583	1
5q-Del	Del_21q11.2	0.0585	1
MVK	CDK12	0.0586	1
Del_8p22	Del_10q25.2	0.0587	1
Amp_8p11.23	Amp_17q12	0.0588	1
CRIPAK	RB1	0.0589	1
B2M	NF1	0.059	1
SMAD2	PTGDR	0.059	1
NF1	RBPJ	0.059	1
Amp_5p12	Del_21q11.2	0.059	1
ACVR1B	OR4D10	0.0591	1
ACVR1B	DDX26B	0.0591	1
DDX26B	KDM6A	0.0591	1
P2RY13	PIK3R1	0.0592	1
NR1H3	PIK3R1	0.0592	1
PIK3R1	FYN	0.0592	1
GRB2	RLIM	0.0594	1
GRB2	MPHOSPH10	0.0594	1
TP53	CHUK	0.0595	1
WNT1	NF2	0.0595	1
STARD3NL	LARP4B	0.0596	1
SOX9	BCORL1	0.0597	1
6p-Amp	Amp_5p12	0.0597	1
FAM123B	Del_6p25.3	0.0598	1
Del_5q22.2	Del_10q25.2	0.0598	1
Amp_13q12.2	Del_3q26.31	0.0599	1
Del_6p25.3	Del_10q21.1	0.0599	1
Del_10q21.1	Del_19p13.3	0.0599	1
FAM123B	LARP4B	0.06	1
SOX9	MGA	0.0601	1
18q-Del	Amp_8p11.23	0.0601	1
22q-Del	Amp_10q22.3	0.0601	1
ATXN3L	TPRKB	0.0603	1
ATXN3L	HIST1H1T	0.0603	1
Amp_20q11.21	Del_17q24.3	0.0603	1
CDH1	HLA-A	0.0604	1
CDH1	GMPS	0.0604	1
PRKDC	ERBB2	0.0604	1
16q-Amp	17p-Del	0.0604	1
Amp_8p11.23	Del_2p12	0.0604	1
CDH1	IQCD	0.0605	1
CDH1	IFT57	0.0605	1
ZBTB20	CREBBP	0.0605	1
Amp_6p21.1	Amp_20p12.1	0.0605	1
Amp_8p11.23	Del_18q21.2	0.0605	1
GGT1	ASXL1	0.0606	1
PRKDC	RSPH3	0.0606	1
FBXW7	SETD2	0.0606	1
TPRKB	ALPK2	0.0606	1
ALPK2	HIST1H1T	0.0606	1
APC	20p-Amp	0.0607	1
MAPK6	PTEN	0.0607	1
IQCD	BMPR2	0.0607	1
APC	Del_3p26.3	0.0608	1
ATXN3L	22q-Del	0.0611	1
ST3GAL6	CTNNB1	0.0611	1
CTNNB1	Amp_8p11.23	0.0611	1
8q-Amp	Amp_5p12	0.0611	1
22q-Del	Del_3q26.31	0.0611	1
Del_3q26.31	Del_4p16.1	0.0611	1
FMN2	CHUK	0.0612	1
Amp_5p12	Del_17q24.3	0.0615	1
GGT1	Del_15q15.2	0.0616	1
5q-Del	Amp_20q13.12	0.0616	1
Amp_2q33.1	Amp_20q13.12	0.0616	1
Del_8p22	Del_21q11.2	0.0617	1
WNT1	CREBBP	0.0618	1
12q-Amp	Amp_20p11.21	0.0619	1
9p-Amp	Amp_20p11.21	0.0619	1
12p-Amp	Del_2q22.1	0.062	1
4q-Del	Del_2q22.1	0.062	1
TP53	Del_4p16.1	0.0621	1
FAM123B	ZNF486	0.0621	1
TXNDC2	FKBP9	0.0621	1
MLH1	RHOA	0.0621	1
TOP2B	ALDH1A3	0.0621	1
14q-Del	Amp_2q33.1	0.0621	1
20p-Del	Del_5q12.1	0.0621	1
Del_16p13.3	Del_19p13.3	0.0621	1
Amp_20q11.21	Del_5q23.3	0.0622	1
16q-Amp	Del_8p22	0.0623	1
Amp_2q33.1	Amp_13q22.1	0.0623	1
18p-Del	Amp_11p15.5	0.0624	1
CRIPAK	SLC12A6	0.0626	1
2p-Amp	Amp_13q12.13	0.0626	1
2q-Amp	Amp_13q12.13	0.0626	1
Amp_11p15.5	Del_14q11.2	0.0627	1
SOX9	RB1	0.0628	1
ZFP36L2	EGR1	0.0628	1
EGR1	RPTN	0.0628	1
EGR1	HLA-A	0.0628	1
RPTN	ST3GAL6	0.0628	1
RPTN	PLEKHF2	0.0628	1
ST3GAL6	RBPJ	0.0628	1
ST3GAL6	GMPS	0.0628	1
PLEKHF2	RBPJ	0.0628	1
ERBB2	LARP4B	0.063	1
Del_16q23.1	Del_21q21.1	0.063	1
TP53	Del_17q24.3	0.0632	1
ALPK2	12q-Amp	0.0632	1
8q-Amp	15q-Del	0.0633	1
Amp_8p11.21	Del_5q12.1	0.0634	1
Del_2q22.1	Del_21q11.2	0.0634	1
20p-Amp	Del_4q35.1	0.0635	1
20q-Amp	21q-Del	0.0635	1
FBXW7	ROS1	0.0636	1
ATXN3L	C11orf30	0.0636	1
C11orf30	NEXN	0.0636	1
Amp_2q33.1	Amp_6p21.1	0.0636	1
Amp_6p21.1	Amp_19q12	0.0636	1
TP53	C2orf29	0.0637	1
1p-Del	Del_5q22.2	0.0639	1
Del_2p12	Del_10q25.2	0.0639	1
RNF43	HIST1H1T	0.064	1
RPTN	SETD2	0.064	1
CHUK	PTGDR	0.064	1
C11orf30	Del_7q31.1	0.064	1
TXNDC2	SMAD4	0.0642	1
GGT1	Del_14q11.2	0.0642	1
GGT1	Del_15q21.1	0.0642	1
SMAD2	ZBTB20	0.0643	1
SMAD2	MAP4K3	0.0643	1
PTCH1	GMNN	0.0645	1
BCOR	WNT1	0.0647	1
12q-Amp	16q-Amp	0.0647	1
Amp_6p21.1	Del_14q11.2	0.0647	1
TP53	THOC7	0.0648	1
TP53	Del_2q22.1	0.0648	1
ZFP36L2	PTEN	0.0649	1
B2M	PTEN	0.0649	1
RBBP7	PTEN	0.0649	1
OR4D10	IFT57	0.0651	1
OR4D10	ZNF486	0.0651	1
ERBB2	IQCD	0.0651	1
ERBB2	ZNF486	0.0651	1
IQCD	Amp_1q31.1	0.0651	1
IFT57	DDX26B	0.0651	1
DDX26B	ZNF486	0.0651	1
Del_5q23.3	Del_10q25.2	0.0652	1
MGA	GMNN	0.0654	1
PTGDR	Del_5q21.2	0.0654	1
21q-Del	Del_7q31.1	0.0654	1
8p-Del	Del_10q25.2	0.0654	1
SELPLG	THOC7	0.0655	1
MAPK6	FAM9A	0.0655	1
GRB2	FKBP9	0.0655	1
GRB2	ALDH1A3	0.0655	1
FAM9A	MGA	0.0658	1
MGA	RSPH3	0.0658	1
Amp_6p21.1	Amp_20q13.12	0.0658	1
Del_2q22.1	Del_5q12.1	0.0658	1
NF1	MVK	0.0659	1
MAP4K3	HIST1H1T	0.0659	1
NLRC4	RLIM	0.0662	1
STARD3NL	MVK	0.0663	1
MVK	NR1H3	0.0663	1
NR1H3	PRRG1	0.0663	1
PRRG1	FYN	0.0663	1
C14orf184	8q-Amp	0.0663	1
Del_10q25.2	Del_12p13.1	0.0665	1
PRKDC	C14orf184	0.0666	1
PLAGL2	SMAD4	0.0666	1
ACVR1B	NF1	0.0668	1
TPRKB	Amp_8p11.23	0.0668	1
DDX26B	SMAD4	0.0668	1
Amp_1q31.1	Del_2p12	0.0673	1
PTEN	Amp_8p11.23	0.0674	1
Del_5q22.2	Del_15q22.33	0.0674	1
TXNDC2	ASXL1	0.0675	1
Amp_20q13.12	Del_5q21.2	0.0675	1
FMN2	MPHOSPH10	0.0678	1
SOX9	ATM	0.0679	1
20p-Del	Amp_13q12.2	0.068	1
9p-Amp	Amp_5p12	0.0682	1
SOX9	MAPK6	0.0684	1
1p-Del	Amp_20q11.21	0.0684	1
Del_5q23.3	Del_16p13.3	0.0684	1
B2M	ALPK2	0.0685	1
ASXL1	RBPJ	0.0685	1
ASXL1	HLA-A	0.0685	1
Del_4p16.1	Del_7q31.1	0.0686	1
WNT1	12q-Amp	0.0687	1
ALG12	12q-Amp	0.0687	1
Del_5q22.2	Del_19p13.3	0.0687	1
9p-Amp	Del_21q11.2	0.0688	1
ZFP36L2	KDM6A	0.069	1
ACVR1B	RBPJ	0.069	1
ACVR1B	GMPS	0.069	1
NR1H3	PTEN	0.069	1
RBPJ	KDM6A	0.069	1
RBBP7	KDM6A	0.069	1
PTEN	GPATCH8	0.069	1
HLA-A	KDM6A	0.069	1
TOP2B	PTGDR	0.0691	1
TOP2B	Del_7q31.1	0.0691	1
Del_6q26	Del_7q31.1	0.0691	1
18p-Del	Amp_16p11.2	0.0692	1
NF1	MAP4K3	0.0693	1
NF1	IDH1	0.0693	1
Del_15q21.1	Del_16q23.1	0.0693	1
FAM123B	C2orf29	0.0695	1
FAM123B	FKBP9	0.0695	1
MLH1	MAPK6	0.0695	1
Del_5q21.2	Del_21q11.2	0.0695	1
BCOR	BCL9	0.0696	1
LARP4B	BCORL1	0.0696	1
NEXN	CTNNB1	0.0696	1
ST3GAL6	MPHOSPH10	0.0697	1
GPATCH8	CDK12	0.07	1
Amp_20p12.1	Del_4q22.1	0.07	1
Del_2q22.1	Del_8p22	0.07	1
Amp_11p15.5	Del_18p11.31	0.0701	1
BCL9	RB1	0.0705	1
L1TD1	TOP2B	0.0707	1
1p-Del	Del_15q11.2	0.0707	1
13q-Amp	Amp_17q24.1	0.0708	1
Amp_13q12.13	Del_17q24.3	0.0708	1
NF2	EGR1	0.0709	1
NF2	PLEKHF2	0.0709	1
Amp_20p11.21	Del_15q21.1	0.071	1
APC	Del_4q22.1	0.0717	1
17q-Amp	18q-Del	0.0717	1
APC	Del_12p13.1	0.0719	1
ZBTB20	C11orf30	0.0719	1
GRB2	L1TD1	0.0719	1
RSPH3	L1TD1	0.0719	1
RSPH3	NEXN	0.0719	1
Del_2q22.1	Del_3q26.31	0.0719	1
12p-Amp	Del_10q25.2	0.072	1
FAM9A	SMAD4	0.0722	1
SMAD4	Del_2q22.1	0.0722	1
4p-Del	Amp_20p11.21	0.0722	1
ATM	Del_3p14.2	0.0724	1
FMN2	IQCD	0.0725	1
FMN2	IFT57	0.0725	1
FMN2	ZNF486	0.0725	1
17p-Del	1p-Del	0.0725	1
SMAD2	ERBB2	0.0726	1
ZFP36L2	RHOA	0.0727	1
ZFP36L2	ZNF486	0.0727	1
B2M	RHOA	0.0727	1
IQCD	RBPJ	0.0727	1
IFT57	RBBP7	0.0727	1
IFT57	GMPS	0.0727	1
Amp_1q31.1	Amp_20p12.1	0.0727	1
Amp_17q24.1	Amp_20p12.1	0.0727	1
20p-Del	Del_6q26	0.0728	1
RHOA	PTEN	0.0729	1
20q-Amp	Amp_6p21.1	0.0729	1
Amp_20q12	Del_5q22.2	0.0729	1
4p-Del	Del_6q26	0.073	1
Amp_13q22.1	Del_21q21.1	0.073	1
Del_5q12.1	Del_14q11.2	0.073	1
BCOR	PTCH1	0.0731	1
Del_3p26.3	Del_8p23.2	0.0731	1
RNF43	RBPJ	0.0732	1
16p-Amp	4p-Del	0.0732	1
ACVR1B	2p-Amp	0.0734	1
ACVR1B	2q-Amp	0.0734	1
C2orf29	12p-Amp	0.0736	1
6p-Amp	Amp_12p13.33	0.0736	1
Del_1p13.2	Del_16p13.3	0.0736	1
FAM9A	SETD2	0.0737	1
14q-Del	Del_10q21.1	0.0738	1
Del_5q21.2	Del_21q21.1	0.0738	1
Del_2p12	Del_18q12.2	0.0739	1
SOX9	SETD2	0.0742	1
ST3GAL6	CREBBP	0.0742	1
OR4D10	PRRG1	0.0745	1
Amp_10q22.3	Del_15q11.2	0.0746	1
Del_5q22.2	Del_22q13.32	0.0746	1
TP53	21q-Del	0.0748	1
SELPLG	SMAD4	0.0748	1
4q-Del	Amp_16p11.2	0.0749	1
ARID1A	HIST1H1T	0.075	1
Del_15q15.2	Del_19p13.3	0.075	1
STARD3NL	P2RY13	0.0751	1
STARD3NL	FYN	0.0751	1
STARD3NL	BIRC3	0.0751	1
FBXW7	P2RY13	0.0751	1
FBXW7	GPATCH8	0.0751	1
PCBP1	BIRC3	0.0751	1
DCLK2	GPATCH8	0.0751	1
FYN	GPATCH8	0.0751	1
FYN	BIRC3	0.0751	1
13q-Amp	Del_3q26.31	0.0751	1
NF1	GMNN	0.0752	1
16q-Amp	Del_4p16.1	0.0752	1
Amp_8q24.21	Del_5q12.1	0.0752	1
BCOR	FMN2	0.0754	1
FMN2	DIP2B	0.0754	1
7q-Amp	Del_17q24.3	0.0754	1
SELPLG	BCORL1	0.0759	1
SELPLG	SLC12A6	0.0759	1
BCL9	SLC26A8	0.0759	1
NLRC4	ALDH1A3	0.0759	1
ALDH1A3	BCORL1	0.0759	1
Del_3p26.3	Del_10q25.2	0.0764	1
FBXW7	TOP2B	0.0766	1
RLIM	SETD2	0.0767	1
Amp_8p11.23	Del_18q22.1	0.0767	1
Amp_13q22.1	Del_5q21.2	0.0767	1
Del_18p11.31	Del_19p13.3	0.0767	1
SELPLG	ST3GAL6	0.0768	1
MAPK6	EGR1	0.0768	1
ST3GAL6	SLC26A8	0.0768	1
ST3GAL6	FKBP9	0.0768	1
PLEKHF2	ALDH1A3	0.0768	1
7p-Amp	Amp_1q31.1	0.0768	1
NF1	2p-Amp	0.077	1
SLC12A6	Del_10q21.1	0.077	1
FBXW7	MPHOSPH10	0.0771	1
14q-Del	Amp_11p15.5	0.0771	1
Amp_20p12.1	Del_17q24.3	0.0772	1
FBXW7	ZBTB20	0.0774	1
FBXW7	MAP4K3	0.0774	1
FBXW7	IDH1	0.0774	1
BCOR	PIK3R1	0.0777	1
GGT1	Del_3p26.3	0.0777	1
Amp_8q24.21	Del_5q22.2	0.0777	1
Del_2p12	Del_10q23.31	0.0778	1
FAM9A	ASXL1	0.0779	1
ALPK2	RSPH3	0.0779	1
ASXL1	RSPH3	0.0779	1
Amp_17q12	Del_2q22.1	0.0779	1
16q-Amp	Amp_20p12.1	0.078	1
WNT1	PTEN	0.0781	1
ALG12	PTEN	0.0781	1
7p-Amp	Del_5q12.1	0.0782	1
8q-Amp	Del_5q12.1	0.0782	1
Amp_13q12.13	Del_3q26.31	0.0782	1
TP53	ERBB2	0.0783	1
ROS1	MAP4K3	0.0784	1
GRB2	MAP4K3	0.0785	1
RSPH3	MAP4K3	0.0785	1
17q-Amp	Del_2q22.1	0.0785	1
15q-Del	Del_19p13.3	0.0785	1
Amp_16p11.2	Amp_20p12.1	0.079	1
FAM123B	PRRG1	0.0791	1
MLH1	PRRG1	0.0791	1
MGA	ALDH1A3	0.0791	1
Amp_20q12	Del_17q24.3	0.0791	1
RB1	ALDH1A3	0.0793	1
Del_3p14.2	Del_22q13.32	0.0793	1
Del_15q21.1	Del_19p13.3	0.0795	1
TP53	PLAGL2	0.0796	1
ACVR1B	MPHOSPH10	0.0796	1
PTCH1	Amp_8p11.23	0.0796	1
ROS1	FYN	0.0796	1
TXNDC2	ZBTB20	0.0798	1
TXNDC2	MAP4K3	0.0798	1
ZBTB20	TOP2B	0.0798	1
NLRC4	PTGDR	0.0798	1
TOP2B	IDH1	0.0798	1
BCORL1	PRPS1	0.0798	1
SLC12A6	PTGDR	0.0798	1
17q-Amp	Del_19p13.3	0.0798	1
TP53	Amp_17q12	0.0802	1
RNF43	8p-Amp	0.0803	1
RHOA	MPHOSPH10	0.0805	1
IFT57	MPHOSPH10	0.0805	1
MPHOSPH10	ZNF486	0.0805	1
20p-Del	Del_10q25.2	0.0805	1
GMNN	Amp_15q26.1	0.0806	1
Amp_6p21.1	Del_12p13.1	0.0806	1
17q-Amp	Amp_20p12.1	0.0808	1
Del_3p14.2	Del_17p12	0.0808	1
CDH1	GGT1	0.0809	1
CDH1	TPRKB	0.0809	1
Del_3q26.31	Del_8p22	0.081	1
Del_3p26.3	Del_15q11.2	0.0813	1
Amp_5p12	Del_5q22.2	0.0816	1
B2M	LARP4B	0.0818	1
Del_8q11.1	Del_17q24.3	0.0818	1
FAM123B	PTCH1	0.0819	1
ALPK2	RLIM	0.082	1
Del_1p33	Del_5q23.3	0.082	1
RNF43	GRB2	0.0821	1
4p-Del	Del_2q22.1	0.0821	1
5q-Del	Del_1p36.11	0.0821	1
Amp_20p11.21	Del_5q12.1	0.0822	1
OR4D10	CDK12	0.0824	1
17q-Amp	20p-Amp	0.0828	1
17q-Amp	Del_8p23.2	0.0828	1
7p-Amp	14q-Del	0.0829	1
6p-Amp	Del_17q24.3	0.083	1
ZFP36L2	PRRG1	0.0831	1
ZFP36L2	Amp_10q22.3	0.0831	1
B2M	MVK	0.0831	1
RPTN	PRRG1	0.0831	1
CREBBP	Del_16q23.1	0.0831	1
Amp_10q22.3	Del_8q11.1	0.0831	1
Amp_16p11.2	Del_16p13.3	0.0832	1
EGR1	RB1	0.0833	1
ST3GAL6	RB1	0.0833	1
Amp_20q13.12	Del_16p13.3	0.0834	1
NLRC4	SETD2	0.0836	1
BCORL1	SETD2	0.0836	1
7p-Amp	20p-Del	0.0838	1
8q-Amp	20p-Del	0.0838	1
7p-Amp	Del_4p16.1	0.0839	1
FAM123B	NLRC4	0.084	1
MLH1	BCL9	0.084	1
THOC7	20q-Amp	0.084	1
FAM123B	NEXN	0.0841	1
MLH1	NEXN	0.0841	1
EGR1	L1TD1	0.0842	1
Amp_6p21.1	Del_4q35.1	0.0842	1
Amp_8p11.23	Del_19p13.3	0.0842	1
OR4D10	PCBP1	0.0843	1
OR4D10	DCLK2	0.0843	1
OR4D10	FYN	0.0843	1
RLIM	ATM	0.0844	1
Del_3p14.2	Del_14q11.2	0.0844	1
IQCD	ATM	0.0845	1
IFT57	ATM	0.0845	1
ATM	ZNF486	0.0845	1
PRKDC	RPTN	0.0847	1
BCL9	CDK12	0.0847	1
APC	PRKDC	0.0848	1
SMAD2	GRB2	0.0852	1
VCX2	Amp_8q24.21	0.0852	1
16q-Amp	Amp_8p11.23	0.0852	1
Del_2q22.1	Del_17p12	0.0852	1
ACVR1B	Amp_11p15.5	0.0854	1
PRRG1	SMAD4	0.0854	1
CRIPAK	Del_5q21.2	0.0855	1
MLH1	PRPS1	0.0855	1
Amp_16p11.2	Del_18q22.1	0.0856	1
ACVR1B	ROS1	0.0859	1
ROS1	KDM6A	0.0859	1
Amp_1q31.1	Del_5q21.2	0.0859	1
Amp_15q26.1	Del_4q35.1	0.0859	1
APC	ERBB2	0.086	1
L1TD1	SLC12A6	0.0861	1
BCORL1	Del_3q26.31	0.0861	1
SLC12A6	NEXN	0.0861	1
5q-Del	Del_1p13.2	0.0863	1
Amp_11p15.5	Amp_19q12	0.0863	1
THOC7	8p-Amp	0.0864	1
GRB2	8p-Amp	0.0864	1
WNT1	FBXW7	0.0865	1
FBXW7	ALG12	0.0865	1
FBXW7	C14orf184	0.0865	1
7p-Amp	Del_4q22.1	0.0865	1
Amp_13q12.2	Del_3p26.3	0.0865	1
15q-Del	Amp_20p12.1	0.0869	1
Del_6p25.3	Del_10q25.2	0.087	1
Del_10q25.2	Del_19p13.3	0.087	1
ACVR1B	LARP4B	0.0873	1
P2RY13	BMPR2	0.0873	1
DIP2B	Del_16q23.1	0.0873	1
DCLK2	BMPR2	0.0873	1
Amp_11p15.5	Del_18q22.1	0.0874	1
RNF43	RLIM	0.0875	1
Amp_12p13.33	Amp_13q12.13	0.0875	1
12q-Amp	Amp_15q26.1	0.088	1
2p-Amp	9p-Amp	0.088	1
9p-Amp	Amp_15q26.1	0.088	1
RBPJ	CTNNB1	0.0881	1
GMPS	CTNNB1	0.0881	1
CTNNB1	Del_8q11.1	0.0881	1
Amp_6p21.1	Amp_20q11.21	0.0881	1
ASXL1	PIK3R1	0.0882	1
B2M	PIK3R1	0.0883	1
Del_12p13.1	Del_21q11.2	0.0884	1
ARID1A	KDM6A	0.0886	1
ARID1A	Del_16q23.1	0.0886	1
RBBP7	Del_10q21.1	0.0886	1
12q-Amp	16p-Amp	0.0886	1
1p-Del	Del_8p22	0.0886	1
Del_8q11.1	Del_10q21.1	0.0886	1
SELPLG	IQCD	0.0887	1
SELPLG	IFT57	0.0887	1
SELPLG	ZNF486	0.0887	1
MAPK6	RHOA	0.0887	1
MAPK6	IQCD	0.0887	1
MAPK6	ZNF486	0.0887	1
IQCD	C2orf29	0.0887	1
IQCD	FKBP9	0.0887	1
IQCD	ALDH1A3	0.0887	1
SLC26A8	ZNF486	0.0887	1
ALDH1A3	ZNF486	0.0887	1
12p-Amp	Del_2p12	0.0888	1
Amp_11p15.5	Del_2p12	0.0888	1
Del_4q22.1	Del_6p25.3	0.089	1
APC	15q-Del	0.0891	1
NF1	Del_12p13.1	0.0891	1
Amp_17q12	Del_8p22	0.0891	1
SMAD4	KDM6A	0.0893	1
ARID1A	ALDH1A3	0.0894	1
CRIPAK	PTEN	0.0894	1
SMAD2	TOP2B	0.0894	1
Del_6p25.3	Del_12p13.1	0.0894	1
Del_12p13.1	Del_19p13.3	0.0894	1
SOX9	IQCD	0.0897	1
SOX9	ZNF486	0.0897	1
7q-Amp	Del_15q11.2	0.0897	1
ALG12	Amp_1q31.1	0.0898	1
CHUK	C11orf30	0.0899	1
Amp_13q22.1	Del_3p26.3	0.0899	1
RNF43	SOX9	0.0901	1
PTGDR	GMNN	0.0903	1
Amp_12p13.33	Amp_13q12.2	0.0903	1
NF1	NR1H3	0.0904	1
NF1	DCLK2	0.0904	1
ACVR1B	SLC26A8	0.0909	1
FKBP9	KDM6A	0.0909	1
Del_16p13.3	Del_16q23.1	0.0909	1
ACVR1B	Del_7q31.1	0.091	1
Del_7q31.1	Del_16q23.1	0.091	1
TP53	4q-Del	0.0912	1
TP53	Del_1p13.2	0.0912	1
ALPK2	12p-Amp	0.0912	1
Amp_20q13.12	Del_10q21.1	0.0912	1
8q-Amp	Del_3q26.31	0.0913	1
Amp_20p11.21	Del_21q21.1	0.0916	1
EGR1	IDH1	0.0917	1
ST3GAL6	IDH1	0.0917	1
VCX2	IDH1	0.0917	1
APC	PLEKHF2	0.0918	1
APC	VCX2	0.0918	1
FMN2	PRRG1	0.0919	1
NF2	RHOA	0.0919	1
EGR1	SETD2	0.092	1
Amp_2q33.1	Amp_20q11.21	0.092	1
FAM9A	C11orf30	0.0922	1
CHUK	RSPH3	0.0922	1
GRB2	C11orf30	0.0922	1
C11orf30	RSPH3	0.0922	1
FBXW7	12q-Amp	0.0924	1
MGA	PLAGL2	0.0926	1
Del_3q26.31	Del_5q12.1	0.0926	1
MGA	KDM6A	0.0927	1
Del_5q12.1	Del_16q23.1	0.0927	1
SMAD4	PRPS1	0.0928	1
PTGDR	Del_5q22.2	0.0928	1
SMAD4	Del_4q35.1	0.0929	1
8p-Del	Amp_12p13.33	0.0932	1
Del_2p12	Del_18q22.1	0.0932	1
ALG12	Amp_8p11.23	0.0933	1
C14orf184	Amp_8p11.23	0.0933	1
Amp_1q31.1	Del_4p16.1	0.0933	1
ERBB2	NR1H3	0.0934	1
ERBB2	PCBP1	0.0934	1
ERBB2	DCLK2	0.0934	1
ERBB2	FYN	0.0934	1
ERBB2	GPATCH8	0.0934	1
16q-Amp	Amp_17q24.1	0.0934	1
14q-Del	Del_8q11.1	0.0936	1
APC	7p-Amp	0.0937	1
7p-Amp	Del_3p14.2	0.0937	1
ZFP36L2	STARD3NL	0.0939	1
ZFP36L2	NR1H3	0.0939	1
ZFP36L2	GPATCH8	0.0939	1
B2M	NR1H3	0.0939	1
B2M	FYN	0.0939	1
B2M	GPATCH8	0.0939	1
STARD3NL	RPTN	0.0939	1
STARD3NL	RBBP7	0.0939	1
STARD3NL	HLA-A	0.0939	1
STARD3NL	GMPS	0.0939	1
RPTN	NR1H3	0.0939	1
RPTN	DCLK2	0.0939	1
RPTN	GPATCH8	0.0939	1
P2RY13	RBPJ	0.0939	1
P2RY13	RBBP7	0.0939	1
PCBP1	RBBP7	0.0939	1
PCBP1	HLA-A	0.0939	1
RBPJ	FYN	0.0939	1
RBPJ	BIRC3	0.0939	1
RBBP7	DCLK2	0.0939	1
RBBP7	BIRC3	0.0939	1
DCLK2	HLA-A	0.0939	1
DCLK2	GMPS	0.0939	1
HLA-A	FYN	0.0939	1
GMPS	BIRC3	0.0939	1
FBXW7	Del_3p14.2	0.094	1
BCOR	MPHOSPH10	0.0941	1
DIP2B	MPHOSPH10	0.0941	1
RLIM	LARP4B	0.0941	1
MPHOSPH10	LARP4B	0.0941	1
Amp_13q12.2	Del_16p13.3	0.0941	1
Amp_16p11.2	Amp_19q12	0.0943	1
Amp_17q12	Del_8p23.2	0.0943	1
RLIM	CREBBP	0.0944	1
MPHOSPH10	CREBBP	0.0944	1
1p-Del	Del_15q22.33	0.0944	1
ACVR1B	PRKDC	0.0945	1
TPRKB	ROS1	0.0945	1
20p-Amp	Amp_1q31.1	0.0946	1
APC	KDM6A	0.0947	1
Amp_17q24.1	Del_6p25.3	0.0947	1
Amp_17q24.1	Del_6q26	0.0947	1
ZFP36L2	SMAD4	0.0951	1
B2M	SMAD4	0.0951	1
SMAD4	RBBP7	0.0951	1
4p-Del	Amp_20p12.1	0.0951	1
THOC7	Amp_20q11.21	0.0952	1
FAM9A	PIK3R1	0.0954	1
PIK3R1	RSPH3	0.0954	1
ZFP36L2	CDK12	0.0956	1
RPTN	CDK12	0.0956	1
21q-Del	Amp_6p21.1	0.0956	1
21q-Del	Del_3p26.3	0.0956	1
Amp_15q26.1	Del_2p12	0.096	1
FAM123B	NF2	0.0961	1
ACVR1B	12q-Amp	0.0962	1
TPRKB	NLRC4	0.0965	1
TPRKB	BCORL1	0.0965	1
BCL9	HIST1H1T	0.0965	1
PRRG1	Amp_12p13.33	0.0965	1
8p-Del	Del_2p12	0.0966	1
Amp_16p11.2	Del_18q21.2	0.0966	1
CRIPAK	4q-Del	0.0967	1
Del_8p23.2	Del_21q21.1	0.0967	1
SELPLG	ALPK2	0.0968	1
MAPK6	ASXL1	0.0968	1
13q-Amp	Amp_6p21.1	0.0968	1
13q-Amp	Del_3p26.3	0.0968	1
CRIPAK	Del_17q24.3	0.0969	1
BCL9	IDH1	0.0969	1
RHOA	ATXN3L	0.097	1
PLEKHF2	ALPK2	0.097	1
ASXL1	VCX2	0.097	1
IFT57	L1TD1	0.097	1
IFT57	Del_3q26.31	0.097	1
L1TD1	ZNF486	0.097	1
ARID1A	DCLK2	0.0971	1
ALPK2	SMAD4	0.0973	1
18p-Del	Del_2q22.1	0.0973	1
16p-Amp	8q-Amp	0.0974	1
NF1	Del_5q22.2	0.0982	1
FAM123B	STARD3NL	0.0983	1
FAM123B	FYN	0.0983	1
MLH1	DCLK2	0.0983	1
MLH1	GPATCH8	0.0983	1
Amp_13q12.13	Del_10q21.1	0.0983	1
CRIPAK	ATM	0.0984	1
CDH1	ALDH1A3	0.0984	1
Del_2p12	Del_18q21.2	0.0985	1
Del_14q11.2	Del_17q24.3	0.0985	1
FBXW7	Amp_8q24.21	0.0986	1
Del_5q12.1	Del_21q21.1	0.0986	1
8p-Amp	Del_5q23.3	0.0988	1
APC	FMN2	0.099	1
Del_1p33	Del_5q12.1	0.099	1
Amp_8q24.21	Del_15q15.2	0.0991	1
ARID1A	TXNDC2	0.0992	1
GRB2	TOP2B	0.0993	1
RSPH3	Del_6p25.3	0.0993	1
Del_2q22.1	Del_6p25.3	0.0993	1
Del_2q22.1	Del_19p13.3	0.0993	1
ACVR1B	CDH1	0.0994	1
SMAD2	EGR1	0.0995	1
VCX2	Del_12p13.1	0.0995	1
14q-Del	Del_5q22.2	0.0995	1
Amp_6p21.1	Del_19p13.3	0.0995	1
16p-Amp	Amp_8q24.21	0.0997	1
TP53	17q-Amp	0.0998	1
Amp_20p12.1	Del_3p14.2	0.0998	1
GGT1	GMNN	0.0999	1
TPRKB	GMNN	0.0999	1
HIST1H1T	GMNN	0.0999	1
APC	ATXN3L	0.1	1
FAM123B	MAP4K3	0.1	1
SOX9	LARP4B	0.1	1
FMN2	L1TD1	0.1	1
MGA	CTNNB1	0.1	1
16p-Amp	8p-Del	0.1	1
15q-Del	Del_7q31.1	0.1	1
Del_3p14.2	Del_16q23.1	0.1	1
Del_4q35.1	Del_6p25.3	0.1	1
MAPK6	MVK	0.101	1
MVK	FKBP9	0.101	1
PRRG1	SLC26A8	0.101	1
PRRG1	FKBP9	0.101	1
PRRG1	ALDH1A3	0.101	1
FKBP9	Amp_10q22.3	0.101	1
9p-Amp	Del_21q21.1	0.101	1
18q-Del	Amp_10q22.3	0.101	1
Del_5q23.3	Del_10q23.31	0.101	1
Del_16q23.1	Del_21q11.2	0.101	1
APC	Amp_20p12.1	0.102	1
ARID1A	WNT1	0.102	1
ARID1A	ALG12	0.102	1
ROS1	GMNN	0.102	1
MPHOSPH10	12q-Amp	0.102	1
20q-Amp	Del_17q24.3	0.102	1
21q-Del	Amp_20p11.21	0.102	1
Amp_5p12	Amp_8p11.23	0.102	1
Amp_11p15.5	Del_18q21.2	0.102	1
Amp_13q12.2	Del_5q23.3	0.102	1
ARID1A	RSPH3	0.103	1
RNF43	C2orf29	0.103	1
TP53	Amp_8p11.23	0.103	1
BCOR	PRPS1	0.103	1
RHOA	FBXW7	0.103	1
EGR1	NF1	0.103	1
FBXW7	IQCD	0.103	1
DIP2B	PTGDR	0.103	1
RSPH3	ATM	0.103	1
20p-Del	Del_8q11.1	0.103	1
22q-Del	Del_3p14.2	0.103	1
Del_1p33	Del_6p25.3	0.103	1
APC	Del_15q22.33	0.104	1
STARD3NL	MPHOSPH10	0.104	1
P2RY13	MPHOSPH10	0.104	1
PCBP1	MPHOSPH10	0.104	1
RLIM	FYN	0.104	1
MPHOSPH10	DCLK2	0.104	1
MPHOSPH10	FYN	0.104	1
20q-Amp	Del_5q12.1	0.104	1
7q-Amp	Del_5q23.3	0.104	1
Amp_6p21.1	Del_8p22	0.104	1
Del_3p26.3	Del_8p22	0.104	1
Del_3q26.31	Del_17p12	0.104	1
Del_7q31.1	Del_21q21.1	0.104	1
ZFP36L2	DDX26B	0.105	1
OR4D10	RPTN	0.105	1
PRKDC	IQCD	0.105	1
PRKDC	ZNF486	0.105	1
RPTN	DDX26B	0.105	1
DDX26B	RBPJ	0.105	1
DDX26B	RBBP7	0.105	1
BCORL1	8p-Amp	0.105	1
Amp_5p12	Del_18q12.2	0.105	1
Del_3p14.2	Del_18q21.2	0.105	1
CDH1	BIRC3	0.106	1
RHOA	ZBTB20	0.106	1
ATXN3L	SETD2	0.106	1
IFT57	MAP4K3	0.106	1
BCORL1	CTNNB1	0.106	1
CDK12	KDM6A	0.106	1
20p-Amp	Del_3p14.2	0.106	1
20q-Amp	Del_16p13.3	0.106	1
17p-Del	Amp_8p11.21	0.106	1
Amp_8p11.23	Del_18p11.31	0.106	1
BCOR	MAPK6	0.107	1
SELPLG	DIP2B	0.107	1
OR4D10	PTEN	0.107	1
EGR1	CHUK	0.107	1
EGR1	C11orf30	0.107	1
CHUK	ST3GAL6	0.107	1
TPRKB	CTNNB1	0.107	1
PTCH1	Amp_1q31.1	0.107	1
PLAGL2	PTGDR	0.107	1
C11orf30	VCX2	0.107	1
DIP2B	ALDH1A3	0.107	1
12p-Amp	Amp_13q12.13	0.107	1
7p-Amp	Del_2q22.1	0.107	1
14q-Del	Del_16q23.1	0.107	1
Amp_6p21.1	Amp_8p11.21	0.107	1
Del_2p12	Del_7q31.1	0.107	1
Del_5q23.3	Del_12p13.1	0.107	1
TP53	NF2	0.108	1
SOX9	MVK	0.108	1
CDH1	C14orf184	0.108	1
P2RY13	Del_5q22.2	0.108	1
4q-Del	Amp_20q13.12	0.108	1
Amp_13q22.1	Del_17q24.3	0.108	1
Amp_20p12.1	Del_15q15.2	0.108	1
APC	Del_17p12	0.109	1
THOC7	GMNN	0.109	1
GRB2	GMNN	0.109	1
RSPH3	GMNN	0.109	1
12q-Amp	Del_7q31.1	0.109	1
18p-Del	Del_6p25.3	0.109	1
18p-Del	Del_6q26	0.109	1
Amp_1q31.1	Del_10q25.2	0.109	1
Amp_6p21.1	Amp_20q12	0.109	1
Del_7q31.1	Del_10q21.1	0.109	1
CDH1	FAM9A	0.11	1
SMAD2	CTNNB1	0.11	1
THOC7	Amp_20q12	0.11	1
ATXN3L	PRRG1	0.11	1
PRRG1	L1TD1	0.11	1
MPHOSPH10	CDK12	0.11	1
CTNNB1	Del_12p13.1	0.11	1
20p-Amp	Del_15q11.2	0.11	1
20q-Amp	Del_5q21.2	0.11	1
21q-Del	Del_2q22.1	0.11	1
Amp_10q22.3	Del_3q26.31	0.11	1
Del_6p25.3	Del_19p13.3	0.11	1
APC	Amp_8p11.23	0.111	1
APC	Del_5q23.3	0.111	1
RPTN	Del_4p16.1	0.111	1
SMAD4	BCORL1	0.111	1
C14orf184	2p-Amp	0.111	1
C14orf184	6p-Amp	0.111	1
17q-Amp	Del_14q11.2	0.111	1
9p-Amp	21q-Del	0.111	1
Amp_11p15.5	Del_10q23.31	0.111	1
Del_3p14.2	Del_21q21.1	0.111	1
Del_5q21.2	Del_6q26	0.111	1
APC	RSPH3	0.112	1
CRIPAK	ATXN3L	0.112	1
CRIPAK	Del_3q26.31	0.112	1
PLAGL2	8p-Amp	0.112	1
20p-Amp	2p-Amp	0.112	1
20p-Amp	2q-Amp	0.112	1
8q-Amp	9p-Amp	0.112	1
14q-Del	Amp_6p21.1	0.112	1
5q-Del	Amp_20q12	0.112	1
5q-Del	Del_21q21.1	0.112	1
Del_6p25.3	Del_22q13.32	0.112	1
MLH1	KDM6A	0.113	1
STARD3NL	Del_10q23.31	0.113	1
4q-Del	Amp_20p11.21	0.113	1
Amp_8p11.21	Amp_16p11.2	0.113	1
SMAD2	ZNF486	0.114	1
FMN2	P2RY13	0.114	1
FMN2	GPATCH8	0.114	1
STARD3NL	C2orf29	0.114	1
STARD3NL	FKBP9	0.114	1
SELPLG	NR1H3	0.114	1
SELPLG	FYN	0.114	1
SELPLG	GPATCH8	0.114	1
MAPK6	P2RY13	0.114	1
MAPK6	PCBP1	0.114	1
MAPK6	BIRC3	0.114	1
FAM9A	NLRC4	0.114	1
FAM9A	BCORL1	0.114	1
FBXW7	CDK12	0.114	1
BCL9	RSPH3	0.114	1
P2RY13	SLC26A8	0.114	1
NR1H3	FKBP9	0.114	1
NR1H3	ALDH1A3	0.114	1
GRB2	NLRC4	0.114	1
GRB2	SLC12A6	0.114	1
PRRG1	12p-Amp	0.114	1
C2orf29	FYN	0.114	1
C2orf29	BIRC3	0.114	1
SLC26A8	DCLK2	0.114	1
SLC26A8	GPATCH8	0.114	1
DCLK2	FKBP9	0.114	1
FKBP9	GPATCH8	0.114	1
FKBP9	BIRC3	0.114	1
FYN	ALDH1A3	0.114	1
ALDH1A3	GPATCH8	0.114	1
ALDH1A3	CREBBP	0.114	1
BCORL1	Del_2q22.1	0.114	1
2p-Amp	Amp_1q31.1	0.114	1
6p-Amp	Amp_1q31.1	0.114	1
15q-Del	Amp_8q24.21	0.114	1
17p-Del	Del_7q31.1	0.114	1
Amp_1q31.1	Amp_15q26.1	0.114	1
Amp_15q26.1	Amp_17q24.1	0.114	1
Amp_20q12	Del_8q11.1	0.114	1
APC	Amp_20p11.21	0.115	1
ACVR1B	MAP4K3	0.115	1
NF1	PTGDR	0.115	1
ZBTB20	Del_16q23.1	0.115	1
ERBB2	ALPK2	0.115	1
ERBB2	Amp_17q12	0.115	1
MAP4K3	KDM6A	0.115	1
Amp_1q31.1	Amp_17q12	0.115	1
Amp_17q24.1	Del_14q11.2	0.115	1
Del_1p13.2	Del_12p13.1	0.115	1
TXNDC2	EGR1	0.116	1
FMN2	FBXW7	0.116	1
OR4D10	MPHOSPH10	0.116	1
NF2	PTGDR	0.116	1
ST3GAL6	TOP2B	0.116	1
ST3GAL6	Del_6p25.3	0.116	1
RLIM	DDX26B	0.116	1
MPHOSPH10	DDX26B	0.116	1
SMAD4	CDK12	0.116	1
ALDH1A3	12q-Amp	0.116	1
20p-Amp	Del_4q22.1	0.116	1
Amp_10q22.3	Del_4q35.1	0.116	1
Amp_20q13.12	Del_19p13.3	0.116	1
APC	ALDH1A3	0.117	1
ZFP36L2	GMPS	0.117	1
B2M	ROS1	0.117	1
B2M	HLA-A	0.117	1
RPTN	ROS1	0.117	1
RPTN	RBPJ	0.117	1
ALPK2	KDM6A	0.117	1
ASXL1	Del_16q23.1	0.117	1
RBPJ	HLA-A	0.117	1
RBPJ	GMPS	0.117	1
HLA-A	GMPS	0.117	1
20p-Amp	4p-Del	0.117	1
Amp_8q24.21	Del_15q21.1	0.117	1
FAM123B	SMAD2	0.118	1
SOX9	PIK3R1	0.118	1
B2M	BMPR2	0.118	1
WNT1	12p-Amp	0.118	1
IQCD	ASXL1	0.118	1
PLEKHF2	PIK3R1	0.118	1
ASXL1	IFT57	0.118	1
Amp_2q33.1	Del_4q22.1	0.118	1
Del_5q12.1	Del_17q24.3	0.118	1
Del_8q11.1	Del_10q25.2	0.118	1
APC	Del_8p22	0.119	1
TP53	Del_15q21.1	0.119	1
FMN2	IDH1	0.119	1
DCLK2	Amp_12p13.33	0.119	1
12p-Amp	20p-Amp	0.119	1
Amp_11p15.5	Del_8p23.2	0.119	1
Amp_12p13.33	Del_4q22.1	0.119	1
Amp_13q12.13	Del_16p13.3	0.119	1
CRIPAK	FBXW7	0.12	1
CHUK	NLRC4	0.12	1
MVK	IDH1	0.12	1
BCL9	ERBB2	0.12	1
ERBB2	SLC12A6	0.12	1
C11orf30	BCORL1	0.12	1
C11orf30	SLC12A6	0.12	1
PRRG1	MAP4K3	0.12	1
RSPH3	ROS1	0.12	1
CTNNB1	12q-Amp	0.12	1
4p-Del	Del_3q26.31	0.12	1
Del_7q31.1	Del_15q22.33	0.12	1
BCOR	L1TD1	0.121	1
ATXN3L	DIP2B	0.121	1
MGA	8p-Amp	0.121	1
ST3GAL6	Amp_8p11.23	0.121	1
SMAD4	GPATCH8	0.121	1
BCORL1	Amp_8p11.23	0.121	1
16q-Amp	Del_8p23.2	0.121	1
8p-Amp	Del_5q12.1	0.121	1
14q-Del	Amp_20p12.1	0.121	1
20p-Del	Del_7q31.1	0.121	1
5q-Del	Del_17q24.3	0.121	1
Amp_5p12	Del_19p13.3	0.121	1
Amp_8p11.23	Del_5q23.3	0.121	1
Amp_10q22.3	Del_15q22.33	0.121	1
Amp_13q12.2	Del_5q21.2	0.121	1
Amp_19q12	Del_17q24.3	0.121	1
Del_3q26.31	Del_17q24.3	0.121	1
Del_5q12.1	Del_10q23.31	0.121	1
TP53	GMNN	0.122	1
ZFP36L2	PTCH1	0.122	1
B2M	PTCH1	0.122	1
RB1	GMPS	0.122	1
13q-Amp	Del_5q12.1	0.122	1
7q-Amp	Del_2q22.1	0.122	1
Amp_13q12.2	Del_10q25.2	0.122	1
BCOR	HIST1H1T	0.123	1
CHUK	IQCD	0.123	1
PIK3R1	ALDH1A3	0.123	1
LARP4B	HIST1H1T	0.123	1
18p-Del	Amp_2q33.1	0.123	1
Amp_20p12.1	Del_15q21.1	0.123	1
RNF43	RHOA	0.124	1
STARD3NL	Del_3q26.31	0.124	1
ATXN3L	PCBP1	0.124	1
ATXN3L	DCLK2	0.124	1
ATXN3L	GPATCH8	0.124	1
ATXN3L	BIRC3	0.124	1
PLEKHF2	Amp_5p12	0.124	1
NR1H3	L1TD1	0.124	1
PCBP1	NEXN	0.124	1
PCBP1	Amp_2q33.1	0.124	1
L1TD1	GPATCH8	0.124	1
DCLK2	NEXN	0.124	1
NEXN	BIRC3	0.124	1
BIRC3	Amp_2q33.1	0.124	1
BIRC3	Del_3q26.31	0.124	1
16q-Amp	Amp_19q12	0.124	1
16q-Amp	Del_3q26.31	0.124	1
20p-Amp	Del_2p12	0.124	1
9p-Amp	Amp_20q12	0.124	1
Amp_20q11.21	Del_16p13.3	0.124	1
CRIPAK	IDH1	0.125	1
RNF43	ACVR1B	0.125	1
TXNDC2	Del_21q11.2	0.125	1
FBXW7	SLC12A6	0.125	1
VCX2	PTEN	0.125	1
16p-Amp	17p-Del	0.125	1
4p-Del	Amp_1q31.1	0.125	1
4q-Del	Amp_20p12.1	0.125	1
8p-Del	Amp_10q22.3	0.125	1
APC	BCL9	0.126	1
APC	NLRC4	0.126	1
APC	SLC12A6	0.126	1
FMN2	HIST1H1T	0.126	1
ERBB2	RBPJ	0.126	1
ERBB2	RBBP7	0.126	1
ERBB2	16p-Amp	0.126	1
CTNNB1	8p-Del	0.126	1
13q-Amp	Amp_12p13.33	0.126	1
13q-Amp	Del_5q21.2	0.126	1
13q-Amp	Del_10q21.1	0.126	1
16p-Amp	Amp_1q31.1	0.126	1
2q-Amp	6p-Amp	0.126	1
6p-Amp	Amp_15q26.1	0.126	1
SOX9	P2RY13	0.127	1
SOX9	FYN	0.127	1
OR4D10	SLC26A8	0.127	1
ZBTB20	RB1	0.127	1
DIP2B	Del_3p14.2	0.127	1
DDX26B	SLC26A8	0.127	1
DDX26B	FKBP9	0.127	1
CTNNB1	Amp_12p13.33	0.127	1
Amp_20q13.12	Del_5q22.2	0.127	1
APC	Del_5q21.2	0.128	1
TP53	PRPS1	0.128	1
TP53	PTGDR	0.128	1
FAM123B	PTEN	0.128	1
NF1	Amp_12p13.33	0.128	1
2p-Amp	Del_14q11.2	0.128	1
2q-Amp	Del_14q11.2	0.128	1
21q-Del	Amp_13q22.1	0.128	1
Amp_17q12	Del_1p33	0.128	1
CRIPAK	FAM123B	0.129	1
ZFP36L2	MPHOSPH10	0.129	1
B2M	MPHOSPH10	0.129	1
GRB2	Del_16q23.1	0.129	1
RLIM	RBPJ	0.129	1
RLIM	HLA-A	0.129	1
MPHOSPH10	RBBP7	0.129	1
MPHOSPH10	GMPS	0.129	1
Amp_10q22.3	Del_18q12.2	0.129	1
NF2	ATXN3L	0.13	1
FAM9A	PLAGL2	0.13	1
FBXW7	C11orf30	0.13	1
ATXN3L	Del_10q21.1	0.13	1
ZBTB20	ASXL1	0.13	1
ALPK2	IDH1	0.13	1
GRB2	PLAGL2	0.13	1
CREBBP	12q-Amp	0.13	1
9p-Amp	Del_3q26.31	0.13	1
Amp_2q33.1	Del_10q21.1	0.13	1
Amp_6p21.1	Amp_11p15.5	0.13	1
Del_3q26.31	Del_4q35.1	0.13	1
CRIPAK	ALPK2	0.131	1
GGT1	12q-Amp	0.131	1
MGA	12q-Amp	0.131	1
12p-Amp	Amp_13q12.2	0.131	1
13q-Amp	2q-Amp	0.131	1
13q-Amp	6p-Amp	0.131	1
Amp_16p11.2	Del_3p26.3	0.131	1
TXNDC2	BCORL1	0.132	1
WNT1	SETD2	0.132	1
EGR1	BCORL1	0.132	1
ST3GAL6	BCORL1	0.132	1
PLEKHF2	NLRC4	0.132	1
NLRC4	TOP2B	0.132	1
SLC12A6	Del_6p25.3	0.132	1
14q-Del	Del_6q26	0.132	1
14q-Del	Del_19p13.3	0.132	1
18p-Del	Amp_8p11.23	0.132	1
APC	Del_15q15.2	0.133	1
CDH1	OR4D10	0.133	1
RHOA	Del_6p25.3	0.133	1
ERBB2	Amp_16p11.2	0.133	1
IQCD	TOP2B	0.133	1
Amp_1q31.1	Amp_16p11.2	0.133	1
ARID1A	IDH1	0.134	1
NR1H3	Amp_11p15.5	0.134	1
7q-Amp	Del_4q35.1	0.134	1
Del_7q31.1	Del_10q25.2	0.134	1
FBXW7	ATXN3L	0.135	1
ZBTB20	DCLK2	0.135	1
ZBTB20	FYN	0.135	1
ZBTB20	BIRC3	0.135	1
VCX2	Del_15q11.2	0.135	1
PTEN	HIST1H1T	0.135	1
LARP4B	MAP4K3	0.135	1
LARP4B	IDH1	0.135	1
GPATCH8	MAP4K3	0.135	1
CDK12	Del_4p16.1	0.135	1
13q-Amp	Del_5q23.3	0.135	1
16q-Amp	17q-Amp	0.135	1
8p-Amp	Amp_17q24.1	0.135	1
ACVR1B	FMN2	0.136	1
THOC7	Amp_20q13.12	0.136	1
17p-Del	Del_3q26.31	0.136	1
Amp_2q33.1	Amp_13q12.2	0.136	1
Del_8p23.2	Del_10q25.2	0.136	1
APC	GGT1	0.137	1
APC	TPRKB	0.137	1
CRIPAK	FAM9A	0.137	1
MLH1	C11orf30	0.137	1
WNT1	ALPK2	0.137	1
NF2	BCORL1	0.137	1
TPRKB	ALG12	0.137	1
ALPK2	ALG12	0.137	1
Amp_11p15.5	Amp_13q22.1	0.137	1
APC	MPHOSPH10	0.138	1
TP53	Del_5q12.1	0.138	1
CDH1	DIP2B	0.138	1
TPRKB	CDK12	0.138	1
P2RY13	8q-Amp	0.138	1
PRRG1	GMNN	0.138	1
13q-Amp	Del_5q22.2	0.138	1
7q-Amp	5q-Del	0.138	1
7q-Amp	Del_3q26.31	0.138	1
14q-Del	Del_7q31.1	0.138	1
TP53	MLH1	0.139	1
TP53	Amp_20p12.1	0.139	1
FMN2	Del_12p13.1	0.139	1
OR4D10	ATXN3L	0.139	1
RPTN	FBXW7	0.139	1
FBXW7	RBPJ	0.139	1
CHUK	MGA	0.139	1
DDX26B	NEXN	0.139	1
Del_3p26.3	Del_5q12.1	0.139	1
CHUK	PRRG1	0.14	1
SLC26A8	PTEN	0.14	1
PTEN	ALDH1A3	0.14	1
20p-Del	Amp_8q24.21	0.14	1
Amp_6p21.1	Amp_10q22.3	0.14	1
Amp_8p11.23	Del_12p13.1	0.14	1
Amp_13q22.1	Del_3q26.31	0.14	1
CRIPAK	RNF43	0.141	1
FAM123B	RSPH3	0.141	1
ZFP36L2	SELPLG	0.141	1
B2M	ALDH1A3	0.141	1
MLH1	FAM9A	0.141	1
SELPLG	RBPJ	0.141	1
SELPLG	HLA-A	0.141	1
RPTN	SLC26A8	0.141	1
RPTN	FKBP9	0.141	1
MGA	P2RY13	0.141	1
ST3GAL6	PLAGL2	0.141	1
PLAGL2	VCX2	0.141	1
C2orf29	RBBP7	0.141	1
C2orf29	GMPS	0.141	1
RBPJ	FKBP9	0.141	1
RBBP7	ALDH1A3	0.141	1
PTGDR	Amp_15q26.1	0.141	1
8p-Amp	Del_5q21.2	0.141	1
Amp_8p11.21	Amp_17q24.1	0.141	1
Amp_15q26.1	Amp_20p12.1	0.141	1
Del_3p14.2	Del_10q21.1	0.141	1
TP53	Del_3p26.3	0.142	1
FAM123B	RPTN	0.142	1
FAM123B	HLA-A	0.142	1
ACVR1B	CHUK	0.142	1
RPTN	ATM	0.142	1
FBXW7	MVK	0.142	1
FBXW7	GRB2	0.142	1
FBXW7	Amp_10q22.3	0.142	1
IQCD	Amp_5p12	0.142	1
C11orf30	KDM6A	0.142	1
C11orf30	Del_16q23.1	0.142	1
SMAD4	HIST1H1T	0.142	1
SMAD4	Del_10q23.31	0.142	1
Amp_8p11.23	Amp_16p11.2	0.142	1
Amp_12p13.33	Del_8p22	0.142	1
RHOA	PIK3R1	0.143	1
PIK3R1	ZNF486	0.143	1
PIK3R1	Del_3q26.31	0.143	1
DCLK2	CTNNB1	0.143	1
GPATCH8	CTNNB1	0.143	1
1p-Del	Amp_13q12.2	0.143	1
Amp_8q24.21	Del_3p26.3	0.143	1
Amp_13q22.1	Del_10q21.1	0.143	1
Amp_20q11.21	Del_19p13.3	0.143	1
Del_3q26.31	Del_22q13.32	0.143	1
CDH1	EGR1	0.144	1
CDH1	PLEKHF2	0.144	1
CDH1	VCX2	0.144	1
Amp_6p21.1	Del_1p36.11	0.144	1
ARID1A	ASXL1	0.145	1
BCOR	RSPH3	0.145	1
GGT1	20p-Del	0.145	1
THOC7	DIP2B	0.145	1
THOC7	LARP4B	0.145	1
BCL9	CREBBP	0.145	1
DIP2B	Del_2q22.1	0.145	1
RSPH3	LARP4B	0.145	1
HIST1H1T	20p-Del	0.145	1
21q-Del	Del_16p13.3	0.145	1
Amp_12p13.33	Amp_20q13.12	0.145	1
ARID1A	ERBB2	0.146	1
CRIPAK	Del_5q22.2	0.146	1
SMAD2	PCBP1	0.146	1
SMAD2	DCLK2	0.146	1
Amp_11p15.5	Del_21q11.2	0.146	1
STARD3NL	GMNN	0.147	1
FBXW7	DIP2B	0.147	1
PLEKHF2	ROS1	0.147	1
FYN	GMNN	0.147	1
PTGDR	Del_1p33	0.147	1
BIRC3	GMNN	0.147	1
GMNN	16q-Amp	0.147	1
17q-Amp	Del_18q22.1	0.147	1
GGT1	Del_17p12	0.148	1
STARD3NL	CREBBP	0.148	1
DCLK2	CREBBP	0.148	1
C14orf184	8p-Amp	0.148	1
CREBBP	GMNN	0.148	1
12p-Amp	Amp_15q26.1	0.148	1
18p-Del	Amp_5p12	0.148	1
Amp_11p15.5	Amp_15q26.1	0.148	1
Amp_20q12	Del_16p13.3	0.148	1
NF1	8p-Amp	0.149	1
NR1H3	Del_3p14.2	0.149	1
VCX2	7p-Amp	0.149	1
VCX2	8q-Amp	0.149	1
SLC12A6	Del_10q23.31	0.149	1
1p-Del	Del_8p23.2	0.149	1
Amp_17q24.1	Del_18q12.2	0.149	1
Del_15q15.2	Del_16q23.1	0.149	1
ACVR1B	ST3GAL6	0.15	1
SMAD2	LARP4B	0.15	1
WNT1	FAM9A	0.15	1
OR4D10	MAP4K3	0.15	1
FAM9A	ALG12	0.15	1
EGR1	Del_16q23.1	0.15	1
THOC7	ALG12	0.15	1
PLEKHF2	KDM6A	0.15	1
GRB2	C14orf184	0.15	1
RSPH3	C14orf184	0.15	1
13q-Amp	Del_21q21.1	0.15	1
18q-Del	Amp_5p12	0.15	1
1p-Del	Del_15q15.2	0.15	1
Amp_10q22.3	Del_6q26	0.15	1
RHOA	BCL9	0.151	1
BCL9	IQCD	0.151	1
IQCD	SLC12A6	0.151	1
NLRC4	IFT57	0.151	1
SLC12A6	ZNF486	0.151	1
12q-Amp	20q-Amp	0.151	1
16p-Amp	Del_10q23.31	0.151	1
20q-Amp	9p-Amp	0.151	1
14q-Del	Amp_17q24.1	0.151	1
17p-Del	Amp_17q12	0.151	1
Amp_13q12.2	Del_5q22.2	0.151	1
RHOA	PLAGL2	0.152	1
ST3GAL6	ATM	0.152	1
GRB2	Del_5q22.2	0.152	1
C2orf29	BMPR2	0.152	1
8p-Del	Amp_6p21.1	0.152	1
Amp_20q12	Del_5q23.3	0.152	1
Del_2q22.1	Del_5q22.2	0.152	1
ZFP36L2	ATXN3L	0.153	1
ZFP36L2	Del_3q26.31	0.153	1
NF2	MAP4K3	0.153	1
NF2	IDH1	0.153	1
FAM9A	12q-Amp	0.153	1
RPTN	ATXN3L	0.153	1
ATXN3L	HLA-A	0.153	1
RBPJ	Amp_19q12	0.153	1
RBBP7	Del_3q26.31	0.153	1
PTEN	GMPS	0.153	1
CTNNB1	Del_1p33	0.153	1
12q-Amp	Del_2q22.1	0.153	1
16p-Amp	Amp_19q12	0.153	1
16p-Amp	Del_3q26.31	0.153	1
20p-Amp	Del_3p26.3	0.153	1
20p-Del	Del_10q21.1	0.153	1
Amp_6p21.1	Del_8p23.2	0.153	1
Del_2p12	Del_18p11.31	0.153	1
Del_3p14.2	Del_15q15.2	0.153	1
Del_8q11.1	Del_18p11.31	0.153	1
CRIPAK	CHUK	0.154	1
MGA	Amp_15q26.1	0.154	1
ALG12	ATM	0.154	1
PRRG1	8p-Amp	0.154	1
18q-Del	Del_2q22.1	0.154	1
Amp_6p21.1	Del_18q22.1	0.154	1
CRIPAK	FMN2	0.155	1
GGT1	2p-Amp	0.155	1
GGT1	2q-Amp	0.155	1
GGT1	Amp_15q26.1	0.155	1
MAPK6	MPHOSPH10	0.155	1
TPRKB	CREBBP	0.155	1
TPRKB	6p-Amp	0.155	1
TPRKB	Amp_15q26.1	0.155	1
RLIM	ALDH1A3	0.155	1
MPHOSPH10	FKBP9	0.155	1
HIST1H1T	Del_15q22.33	0.155	1
Amp_1q31.1	Amp_8q24.21	0.155	1
Amp_1q31.1	Del_5q22.2	0.155	1
Del_10q21.1	Del_21q11.2	0.155	1
ZFP36L2	Del_5q22.2	0.156	1
TXNDC2	MGA	0.156	1
TXNDC2	KDM6A	0.156	1
RPTN	Del_5q22.2	0.156	1
ATXN3L	ATM	0.156	1
TPRKB	Amp_8p11.21	0.156	1
IQCD	SMAD4	0.156	1
NR1H3	SETD2	0.156	1
TOP2B	KDM6A	0.156	1
SETD2	BIRC3	0.156	1
1p-Del	Del_15q21.1	0.156	1
8p-Del	Del_16p13.3	0.156	1
Amp_13q12.2	Amp_17q24.1	0.156	1
Del_5q12.1	Del_6q26	0.156	1
Del_6q26	Del_16q23.1	0.156	1
FAM123B	TOP2B	0.157	1
TXNDC2	MLH1	0.157	1
FMN2	THOC7	0.157	1
CHUK	PCBP1	0.157	1
CHUK	DCLK2	0.157	1
CHUK	FYN	0.157	1
ERBB2	PIK3R1	0.157	1
C11orf30	BIRC3	0.157	1
PIK3R1	Del_3p14.2	0.157	1
PRPS1	PTGDR	0.157	1
16q-Amp	Amp_6p21.1	0.157	1
8p-Del	Del_2q22.1	0.157	1
Del_6p25.3	Del_18p11.31	0.157	1
WNT1	PIK3R1	0.158	1
PRPS1	7p-Amp	0.158	1
Del_1p33	Del_16q23.1	0.158	1
CRIPAK	EGR1	0.159	1
CRIPAK	ST3GAL6	0.159	1
Amp_8q24.21	Del_10q21.1	0.159	1
GGT1	Del_22q13.32	0.16	1
PRKDC	16q-Amp	0.16	1
TPRKB	BMPR2	0.16	1
IDH1	CREBBP	0.16	1
Del_7q31.1	Del_10q23.31	0.16	1
Del_12p13.1	Del_15q11.2	0.16	1
APC	RBBP7	0.161	1
APC	GMPS	0.161	1
TP53	VCX2	0.161	1
THOC7	CDK12	0.161	1
RSPH3	CDK12	0.161	1
17q-Amp	Del_18q21.2	0.161	1
20q-Amp	Del_5q22.2	0.161	1
9p-Amp	Del_12p13.1	0.161	1
Del_1p36.11	Del_7q31.1	0.161	1
TXNDC2	FBXW7	0.162	1
SMAD2	DDX26B	0.162	1
ERBB2	C2orf29	0.162	1
ERBB2	FKBP9	0.162	1
ERBB2	ALDH1A3	0.162	1
12p-Amp	Amp_20q11.21	0.162	1
B2M	CDH1	0.163	1
WNT1	PTCH1	0.163	1
WNT1	VCX2	0.163	1
OR4D10	MGA	0.163	1
FAM9A	Amp_12p13.33	0.163	1
EGR1	ALG12	0.163	1
THOC7	15q-Del	0.163	1
MVK	PLAGL2	0.163	1
ST3GAL6	ALG12	0.163	1
IQCD	21q-Del	0.163	1
PLEKHF2	ALG12	0.163	1
ALG12	RB1	0.163	1
PIK3R1	MAP4K3	0.163	1
CTNNB1	12p-Amp	0.163	1
CTNNB1	Amp_11p15.5	0.163	1
8q-Amp	Del_2p12	0.163	1
Amp_12p13.33	Del_2q22.1	0.163	1
Amp_13q12.2	Del_5q12.1	0.163	1
Amp_20q13.12	Del_4q22.1	0.163	1
Del_3p14.2	Del_15q21.1	0.163	1
CRIPAK	TP53	0.164	1
CRIPAK	Amp_12p13.33	0.164	1
NR1H3	ASXL1	0.164	1
ASXL1	FYN	0.164	1
ASXL1	BIRC3	0.164	1
12p-Amp	21q-Del	0.164	1
14q-Del	Del_3q26.31	0.164	1
4q-Del	Amp_5p12	0.164	1
Del_2p12	Del_17p12	0.164	1
FMN2	Amp_1q31.1	0.165	1
GMPS	GMNN	0.165	1
Amp_6p21.1	Amp_8p11.23	0.165	1
Amp_20p11.21	Del_5q21.2	0.165	1
Del_7q31.1	Del_15q15.2	0.165	1
SOX9	BMPR2	0.166	1
ZFP36L2	MAP4K3	0.166	1
TXNDC2	Del_3p14.2	0.166	1
BCOR	C11orf30	0.166	1
PRKDC	TPRKB	0.166	1
RPTN	ZBTB20	0.166	1
ZBTB20	HLA-A	0.166	1
ZBTB20	GMPS	0.166	1
RBPJ	IDH1	0.166	1
HLA-A	IDH1	0.166	1
GMPS	IDH1	0.166	1
IDH1	7q-Amp	0.166	1
Amp_6p21.1	Del_17q24.3	0.166	1
Del_3p26.3	Del_17q24.3	0.166	1
Del_3p14.2	Del_19p13.3	0.166	1
MLH1	RLIM	0.167	1
MLH1	MPHOSPH10	0.167	1
ASXL1	C11orf30	0.167	1
LARP4B	8p-Amp	0.167	1
Amp_17q12	Del_3p26.3	0.167	1
APC	PRPS1	0.168	1
TP53	PTCH1	0.168	1
SOX9	RBPJ	0.168	1
ZFP36L2	Del_5q23.3	0.168	1
TXNDC2	16q-Amp	0.168	1
BCOR	ST3GAL6	0.168	1
STARD3NL	Del_6p25.3	0.168	1
P2RY13	Del_6p25.3	0.168	1
ST3GAL6	DIP2B	0.168	1
PCBP1	Del_19p13.3	0.168	1
MPHOSPH10	L1TD1	0.168	1
TOP2B	DCLK2	0.168	1
8q-Amp	17p-Del	0.168	1
1p-Del	5q-Del	0.168	1
SOX9	PTEN	0.169	1
SELPLG	SLC26A8	0.169	1
SELPLG	FKBP9	0.169	1
MAPK6	SMAD4	0.169	1
RHOA	22q-Del	0.169	1
PLAGL2	Del_5q22.2	0.169	1
PRRG1	PIK3R1	0.169	1
PCBP1	PTEN	0.169	1
C2orf29	SMAD4	0.169	1
C2orf29	FKBP9	0.169	1
C2orf29	ALDH1A3	0.169	1
PTEN	FYN	0.169	1
Amp_20p12.1	Del_4p16.1	0.169	1
Del_10q23.31	Del_14q11.2	0.169	1
APC	Del_22q13.32	0.17	1
ARID1A	IFT57	0.17	1
ARID1A	ZNF486	0.17	1
CRIPAK	NF1	0.17	1
ZFP36L2	15q-Del	0.17	1
THOC7	Amp_15q26.1	0.17	1
GRB2	2p-Amp	0.17	1
GRB2	6p-Amp	0.17	1
GRB2	Amp_15q26.1	0.17	1
RSPH3	2q-Amp	0.17	1
RSPH3	6p-Amp	0.17	1
RSPH3	Amp_15q26.1	0.17	1
2p-Amp	Del_2q22.1	0.17	1
2q-Amp	Del_2q22.1	0.17	1
Amp_15q26.1	Del_2q22.1	0.17	1
Del_7q31.1	Del_14q11.2	0.17	1
Del_7q31.1	Del_15q21.1	0.17	1
CRIPAK	PIK3R1	0.171	1
SOX9	NLRC4	0.171	1
ACVR1B	RHOA	0.171	1
MVK	BCL9	0.171	1
BCL9	Amp_10q22.3	0.171	1
NLRC4	PRRG1	0.171	1
NLRC4	Amp_10q22.3	0.171	1
IFT57	KDM6A	0.171	1
IFT57	Del_16q23.1	0.171	1
5q-Del	Del_10q25.2	0.171	1
Amp_2q33.1	Del_10q25.2	0.171	1
RNF43	P2RY13	0.172	1
MLH1	EGR1	0.172	1
MLH1	ST3GAL6	0.172	1
FMN2	MGA	0.172	1
GGT1	17p-Del	0.172	1
PCBP1	ATM	0.172	1
FYN	ATM	0.172	1
ATM	16q-Amp	0.172	1
16p-Amp	Del_17p12	0.172	1
16q-Amp	14q-Del	0.172	1
6p-Amp	Amp_17q12	0.172	1
Amp_20p11.21	Del_4q22.1	0.172	1
Del_1p13.2	Del_3p14.2	0.172	1
APC	PIK3R1	0.173	1
GGT1	PTGDR	0.173	1
GGT1	Del_7q31.1	0.173	1
TPRKB	PRPS1	0.173	1
TPRKB	PTGDR	0.173	1
PTGDR	HIST1H1T	0.173	1
Amp_20q12	Del_19p13.3	0.173	1
SOX9	Del_7q31.1	0.174	1
CDH1	SMAD2	0.174	1
STARD3NL	PLAGL2	0.174	1
P2RY13	PLAGL2	0.174	1
PLAGL2	BIRC3	0.174	1
PRPS1	Amp_8q24.21	0.174	1
9p-Amp	Amp_20q13.12	0.174	1
Amp_8q24.21	Del_7q31.1	0.174	1
Amp_10q22.3	Del_18q22.1	0.174	1
WNT1	RHOA	0.175	1
WNT1	IFT57	0.175	1
RHOA	ALG12	0.175	1
IQCD	ALG12	0.175	1
ALG12	ZNF486	0.175	1
IFT57	C14orf184	0.175	1
20q-Amp	Amp_12p13.33	0.175	1
1p-Del	Amp_13q12.13	0.175	1
Amp_6p21.1	Amp_13q12.2	0.175	1
Amp_20p12.1	Del_15q22.33	0.175	1
GGT1	14q-Del	0.176	1
RHOA	ROS1	0.176	1
8q-Amp	Del_15q15.2	0.176	1
8p-Del	Amp_20p12.1	0.176	1
Del_5q22.2	Del_14q11.2	0.176	1
EGR1	12q-Amp	0.177	1
ST3GAL6	12q-Amp	0.177	1
12p-Amp	Del_21q21.1	0.177	1
16p-Amp	4q-Del	0.177	1
4p-Del	Amp_6p21.1	0.177	1
Amp_5p12	Del_18q21.2	0.177	1
Amp_6p21.1	Del_21q21.1	0.177	1
Amp_11p15.5	Del_8q11.1	0.177	1
Del_3p14.2	Del_8p23.2	0.177	1
RB1	12q-Amp	0.178	1
7p-Amp	Del_17q24.3	0.178	1
8q-Amp	Del_17q24.3	0.178	1
18p-Del	Del_2p12	0.178	1
Amp_6p21.1	Del_10q21.1	0.178	1
Amp_12p13.33	Del_2p12	0.178	1
Amp_20p11.21	Del_2p12	0.178	1
Del_1p36.11	Del_10q25.2	0.178	1
Del_3p26.3	Del_10q21.1	0.178	1
B2M	SMAD2	0.179	1
SMAD2	HLA-A	0.179	1
SMAD2	GMPS	0.179	1
NF2	Del_16q23.1	0.179	1
21q-Del	Del_5q12.1	0.179	1
4p-Del	Amp_15q26.1	0.179	1
Amp_17q12	Del_1p36.11	0.179	1
Del_1p13.2	Del_10q25.2	0.179	1
Del_8q11.1	Del_12p13.1	0.179	1
GMNN	17p-Del	0.18	1
Amp_6p21.1	Amp_13q22.1	0.18	1
THOC7	PTCH1	0.181	1
ATXN3L	Amp_1q31.1	0.181	1
ERBB2	NEXN	0.181	1
ERBB2	Amp_19q12	0.181	1
GRB2	RB1	0.181	1
L1TD1	Amp_17q24.1	0.181	1
12q-Amp	Amp_20q11.21	0.181	1
8p-Del	Del_6p25.3	0.181	1
Amp_1q31.1	Amp_19q12	0.181	1
Amp_13q22.1	Del_5q23.3	0.181	1
CRIPAK	Del_4q22.1	0.182	1
ZBTB20	RLIM	0.182	1
MPHOSPH10	IDH1	0.182	1
2q-Amp	Amp_13q12.2	0.182	1
6p-Amp	Amp_13q12.2	0.182	1
17p-Del	Amp_8p11.23	0.182	1
18p-Del	Del_16p13.3	0.182	1
Amp_10q22.3	Amp_16p11.2	0.182	1
Del_6q26	Del_17q24.3	0.182	1
FAM123B	21q-Del	0.183	1
FAM123B	Del_5q21.2	0.183	1
SELPLG	ATXN3L	0.183	1
SELPLG	NEXN	0.183	1
MAPK6	ATXN3L	0.183	1
PRKDC	Amp_16p11.2	0.183	1
ATXN3L	ALDH1A3	0.183	1
ALG12	Amp_8p11.21	0.183	1
C2orf29	GMNN	0.183	1
SLC26A8	GMNN	0.183	1
SLC26A8	Amp_2q33.1	0.183	1
FKBP9	GMNN	0.183	1
ALDH1A3	NEXN	0.183	1
15q-Del	Del_5q12.1	0.183	1
21q-Del	Del_16q23.1	0.183	1
5q-Del	Del_16p13.3	0.183	1
Amp_12p13.33	Amp_20p11.21	0.183	1
Del_3q26.31	Del_16p13.3	0.183	1
ASXL1	Del_5q23.3	0.184	1
Del_6p25.3	Del_15q21.1	0.184	1
TP53	BIRC3	0.185	1
TP53	16q-Amp	0.185	1
SMAD2	CREBBP	0.185	1
VCX2	CTNNB1	0.185	1
7q-Amp	9p-Amp	0.185	1
8p-Amp	Amp_15q26.1	0.185	1
Del_14q11.2	Del_16p13.3	0.185	1
TXNDC2	OR4D10	0.186	1
BCL9	KDM6A	0.186	1
ST3GAL6	CDK12	0.186	1
NLRC4	KDM6A	0.186	1
CTNNB1	2q-Amp	0.186	1
6p-Amp	Amp_13q22.1	0.186	1
Amp_10q22.3	Del_18q21.2	0.186	1
Amp_20p11.21	Del_10q25.2	0.186	1
Del_2q22.1	Del_18q12.2	0.186	1
Del_3p14.2	Del_5q12.1	0.186	1
GGT1	ATM	0.187	1
FBXW7	DCLK2	0.187	1
FBXW7	BIRC3	0.187	1
FBXW7	KDM6A	0.187	1
FBXW7	Del_16q23.1	0.187	1
NR1H3	PTCH1	0.187	1
PTCH1	DCLK2	0.187	1
PTCH1	FYN	0.187	1
RSPH3	BMPR2	0.187	1
16q-Amp	Del_17p12	0.187	1
8p-Amp	Amp_6p21.1	0.187	1
Amp_8p11.21	Del_12p13.1	0.187	1
Amp_20q13.12	Del_12p13.1	0.187	1
Del_5q12.1	Del_8q11.1	0.187	1
APC	CHUK	0.188	1
MGA	PRPS1	0.188	1
MGA	Del_7q31.1	0.188	1
MVK	ALG12	0.188	1
MVK	C14orf184	0.188	1
ALG12	PRRG1	0.188	1
SMAD4	Amp_20p12.1	0.188	1
C14orf184	Amp_10q22.3	0.188	1
Amp_8q24.21	Del_16p13.3	0.188	1
ARID1A	ACVR1B	0.189	1
FAM9A	Del_7q31.1	0.189	1
THOC7	PTGDR	0.189	1
MVK	Amp_8p11.23	0.189	1
ASXL1	DDX26B	0.189	1
PRRG1	Amp_8p11.23	0.189	1
L1TD1	PTEN	0.189	1
PTEN	NEXN	0.189	1
BMPR2	IDH1	0.189	1
12p-Amp	Del_4q22.1	0.189	1
20p-Del	8p-Del	0.189	1
5q-Del	8p-Del	0.189	1
Amp_2q33.1	Del_18p11.31	0.189	1
Del_3p14.2	Del_18p11.31	0.189	1
Del_15q11.2	Del_16q23.1	0.189	1
ARID1A	PTGDR	0.19	1
FMN2	RLIM	0.19	1
PTGDR	Del_15q11.2	0.19	1
Amp_8p11.21	Del_17q24.3	0.19	1
Del_7q31.1	Del_15q11.2	0.19	1
SOX9	MPHOSPH10	0.191	1
BCOR	IFT57	0.191	1
FMN2	ST3GAL6	0.191	1
GGT1	TPRKB	0.191	1
BCL9	PCBP1	0.191	1
P2RY13	SLC12A6	0.191	1
IQCD	DIP2B	0.191	1
NR1H3	NLRC4	0.191	1
NR1H3	BCORL1	0.191	1
NLRC4	DCLK2	0.191	1
DCLK2	SLC12A6	0.191	1
FYN	BCORL1	0.191	1
BCORL1	BIRC3	0.191	1
BCORL1	16q-Amp	0.191	1
17q-Amp	14q-Del	0.191	1
20q-Amp	Del_2p12	0.191	1
1p-Del	Del_5q23.3	0.191	1
21q-Del	Amp_10q22.3	0.191	1
B2M	C11orf30	0.192	1
MVK	KDM6A	0.192	1
PRRG1	Del_16q23.1	0.192	1
PCBP1	Amp_20p12.1	0.192	1
L1TD1	GMNN	0.192	1
HLA-A	Del_3p26.3	0.192	1
NEXN	GMNN	0.192	1
16p-Amp	Del_3p26.3	0.192	1
15q-Del	Del_6p25.3	0.192	1
5q-Del	Del_1p33	0.192	1
Amp_12p13.33	Del_6q26	0.192	1
Del_1p33	Del_3q26.31	0.192	1
FAM123B	MAPK6	0.193	1
FAM123B	ALDH1A3	0.193	1
MLH1	SLC26A8	0.193	1
FAM9A	CREBBP	0.193	1
THOC7	Del_15q22.33	0.193	1
GRB2	CREBBP	0.193	1
CREBBP	Del_2q22.1	0.193	1
9p-Amp	Amp_17q24.1	0.193	1
14q-Del	Del_3p14.2	0.193	1
Amp_8p11.23	Del_16p13.3	0.193	1
FBXW7	ST3GAL6	0.194	1
FBXW7	PLEKHF2	0.194	1
Amp_1q31.1	Amp_11p15.5	0.194	1
ZFP36L2	PLAGL2	0.195	1
RPTN	PLAGL2	0.195	1
THOC7	ERBB2	0.195	1
FBXW7	Amp_8p11.23	0.195	1
ERBB2	RSPH3	0.195	1
PLAGL2	RBPJ	0.195	1
RSPH3	Amp_1q31.1	0.195	1
RSPH3	Amp_17q24.1	0.195	1
TOP2B	12q-Amp	0.195	1
8q-Amp	Del_15q21.1	0.195	1
9p-Amp	Del_6p25.3	0.195	1
Amp_10q22.3	Del_8p23.2	0.195	1
Amp_20p11.21	Del_5q22.2	0.195	1
Del_6q26	Del_10q21.1	0.195	1
APC	ROS1	0.196	1
MLH1	FBXW7	0.196	1
OR4D10	8p-Del	0.196	1
PIK3R1	DCLK2	0.196	1
PIK3R1	16q-Amp	0.196	1
RLIM	Del_12p13.1	0.196	1
RBBP7	Del_3p14.2	0.196	1
7q-Amp	Del_12p13.1	0.196	1
21q-Del	Del_3p14.2	0.196	1
Del_3p14.2	Del_8q11.1	0.196	1
13q-Amp	21q-Del	0.197	1
Del_10q25.2	Del_14q11.2	0.197	1
TP53	Del_3p14.2	0.198	1
SELPLG	ZBTB20	0.198	1
SELPLG	17q-Amp	0.198	1
MAPK6	MAP4K3	0.198	1
EGR1	Amp_12p13.33	0.198	1
FBXW7	PRPS1	0.198	1
ZBTB20	SLC26A8	0.198	1
IQCD	Amp_15q26.1	0.198	1
IFT57	2p-Amp	0.198	1
IFT57	6p-Amp	0.198	1
VCX2	15q-Del	0.198	1
ALDH1A3	IDH1	0.198	1
20p-Amp	4q-Del	0.198	1
APC	Del_5q22.2	0.199	1
ATXN3L	Del_3q26.31	0.199	1
13q-Amp	8p-Amp	0.199	1
Amp_2q33.1	Amp_19q12	0.199	1
Amp_16p11.2	Del_18q12.2	0.199	1
Del_2q22.1	Del_22q13.32	0.199	1
B2M	NF2	0.2	1
WNT1	P2RY13	0.2	1
WNT1	NR1H3	0.2	1
ZBTB20	GMNN	0.2	1
P2RY13	ALG12	0.2	1
NR1H3	ALG12	0.2	1
MPHOSPH10	12p-Amp	0.2	1
SMAD4	Del_5q23.3	0.2	1
C14orf184	16q-Amp	0.2	1
MAP4K3	GMNN	0.2	1
Amp_1q31.1	Del_1p36.11	0.2	1
FAM123B	BCL9	0.201	1
FAM123B	BCORL1	0.201	1
ERBB2	IDH1	0.201	1
IFT57	9p-Amp	0.201	1
RSPH3	SMAD4	0.201	1
17q-Amp	Del_18q12.2	0.201	1
Amp_2q33.1	Del_18q22.1	0.201	1
Amp_20p12.1	Del_2p12	0.201	1
APC	Del_4q35.1	0.202	1
CRIPAK	Del_4q35.1	0.202	1
SETD2	PTGDR	0.202	1
SETD2	Del_7q31.1	0.202	1
14q-Del	Amp_16p11.2	0.202	1
APC	Del_1p13.2	0.203	1
TP53	1p-Del	0.203	1
FBXW7	12p-Amp	0.203	1
C14orf184	Amp_8q24.21	0.203	1
CDK12	8p-Amp	0.203	1
Amp_5p12	Del_18p11.31	0.203	1
Amp_8p11.23	Del_17p12	0.203	1
APC	Del_14q11.2	0.204	1
HIST1H1T	Del_1p36.11	0.204	1
FAM123B	RHOA	0.205	1
FAM123B	IQCD	0.205	1
ZFP36L2	TOP2B	0.205	1
TXNDC2	HLA-A	0.205	1
TXNDC2	GMPS	0.205	1
MLH1	IFT57	0.205	1
EGR1	PRPS1	0.205	1
PRKDC	Del_2q22.1	0.205	1
RPTN	Del_6p25.3	0.205	1
ST3GAL6	PRPS1	0.205	1
ST3GAL6	PTGDR	0.205	1
PLEKHF2	PRPS1	0.205	1
PLAGL2	RLIM	0.205	1
VCX2	PTGDR	0.205	1
RBPJ	TOP2B	0.205	1
RBBP7	Del_19p13.3	0.205	1
TOP2B	GMPS	0.205	1
HLA-A	Del_19p13.3	0.205	1
SLC12A6	Del_3p14.2	0.205	1
Amp_12p13.33	Del_18q22.1	0.205	1
Amp_13q12.13	Amp_17q24.1	0.205	1
Amp_20p12.1	Del_10q25.2	0.205	1
Del_2q22.1	Del_18p11.31	0.205	1
ARID1A	GMNN	0.206	1
TP53	PIK3R1	0.206	1
GGT1	Del_5q23.3	0.206	1
SMAD4	Del_10q25.2	0.206	1
RB1	CDK12	0.206	1
GMNN	Del_15q11.2	0.206	1
6p-Amp	Amp_13q12.13	0.206	1
9p-Amp	Amp_12p13.33	0.206	1
18q-Del	Del_6p25.3	0.206	1
Amp_20q11.21	Del_2p12	0.206	1
MLH1	ALG12	0.207	1
MLH1	C14orf184	0.207	1
CHUK	PIK3R1	0.207	1
12p-Amp	Amp_20q12	0.207	1
Del_2p12	Del_22q13.32	0.207	1
FAM123B	NF1	0.208	1
ZFP36L2	Del_15q22.33	0.208	1
GGT1	THOC7	0.208	1
GGT1	GRB2	0.208	1
FAM9A	TPRKB	0.208	1
THOC7	TPRKB	0.208	1
TPRKB	GRB2	0.208	1
TPRKB	RSPH3	0.208	1
GRB2	HIST1H1T	0.208	1
SMAD4	Amp_10q22.3	0.208	1
8p-Amp	Del_6p25.3	0.208	1
FBXW7	Amp_12p13.33	0.209	1
ALPK2	Del_7q31.1	0.209	1
ASXL1	PTGDR	0.209	1
ROS1	IDH1	0.209	1
GMNN	Del_12p13.1	0.209	1
CHUK	RLIM	0.21	1
RLIM	Amp_6p21.1	0.21	1
HIST1H1T	Del_15q15.2	0.21	1
7p-Amp	9p-Amp	0.21	1
8q-Amp	4q-Del	0.21	1
8q-Amp	Del_10q21.1	0.21	1
1p-Del	Amp_6p21.1	0.21	1
Amp_20p11.21	Del_21q11.2	0.21	1
Del_5q22.2	Del_10q23.31	0.21	1
Del_5q22.2	Del_16p13.3	0.21	1
PRRG1	6p-Amp	0.211	1
2p-Amp	Amp_10q22.3	0.211	1
6p-Amp	Amp_10q22.3	0.211	1
14q-Del	Del_10q23.31	0.211	1
Amp_11p15.5	Del_1p33	0.211	1
ALG12	DDX26B	0.212	1
RBPJ	SMAD4	0.212	1
SMAD4	HLA-A	0.212	1
SMAD4	GMPS	0.212	1
8p-Del	Amp_5p12	0.212	1
Amp_2q33.1	Del_17p12	0.212	1
Amp_20q13.12	Del_17q24.3	0.212	1
ACVR1B	PTCH1	0.213	1
ACVR1B	RB1	0.213	1
SMAD2	SELPLG	0.213	1
SMAD2	SLC26A8	0.213	1
12p-Amp	20q-Amp	0.213	1
20q-Amp	Del_1p13.2	0.213	1
9p-Amp	18p-Del	0.213	1
Del_6p25.3	Del_18q22.1	0.213	1
Del_12p13.1	Del_16p13.3	0.213	1
APC	22q-Del	0.214	1
SOX9	SLC26A8	0.214	1
ACVR1B	PCBP1	0.214	1
ACVR1B	FYN	0.214	1
BCOR	Amp_10q22.3	0.214	1
GGT1	12p-Amp	0.214	1
GGT1	4q-Del	0.214	1
ATXN3L	Del_10q23.31	0.214	1
MVK	DIP2B	0.214	1
P2RY13	KDM6A	0.214	1
PLEKHF2	BMPR2	0.214	1
NR1H3	Del_16q23.1	0.214	1
ALPK2	Amp_8p11.23	0.214	1
DIP2B	PRRG1	0.214	1
17p-Del	Del_16p13.3	0.214	1
5q-Del	Del_10q23.31	0.214	1
APC	Del_8p23.2	0.215	1
ARID1A	MAPK6	0.215	1
RPTN	ALPK2	0.215	1
RPTN	ASXL1	0.215	1
NF1	8q-Amp	0.215	1
ATXN3L	ZBTB20	0.215	1
NLRC4	DIP2B	0.215	1
PLAGL2	ALDH1A3	0.215	1
DIP2B	BCORL1	0.215	1
PRPS1	7q-Amp	0.215	1
PTGDR	7q-Amp	0.215	1
21q-Del	Del_8p23.2	0.215	1
Amp_6p21.1	Amp_13q12.13	0.215	1
Amp_20q11.21	Del_8q11.1	0.215	1
Del_2p12	Del_16p13.3	0.215	1
RNF43	PRPS1	0.216	1
RNF43	PTGDR	0.216	1
HIST1H1T	Del_15q21.1	0.216	1
6p-Amp	Del_5q21.2	0.216	1
21q-Del	Del_8p22	0.216	1
Amp_13q22.1	Del_10q25.2	0.216	1
ARID1A	Del_6p25.3	0.217	1
ACVR1B	KDM6A	0.217	1
BCL9	SETD2	0.217	1
DIP2B	Del_10q23.31	0.217	1
17p-Del	Amp_15q26.1	0.217	1
Del_2p12	Del_21q11.2	0.217	1
Del_3q26.31	Del_14q11.2	0.217	1
CHUK	GMNN	0.218	1
7p-Amp	Del_6p25.3	0.218	1
8q-Amp	Del_6p25.3	0.218	1
8q-Amp	Del_19p13.3	0.218	1
Amp_2q33.1	Del_18q21.2	0.218	1
Amp_20q12	Del_3p26.3	0.218	1
APC	DCLK2	0.219	1
APC	FYN	0.219	1
APC	BIRC3	0.219	1
TP53	Del_1p33	0.219	1
TXNDC2	PTCH1	0.219	1
4p-Del	Amp_5p12	0.219	1
APC	14q-Del	0.22	1
RHOA	PRPS1	0.22	1
RHOA	Del_7q31.1	0.22	1
IQCD	PTGDR	0.22	1
PTGDR	ZNF486	0.22	1
ZNF486	Del_7q31.1	0.22	1
12p-Amp	Del_16q23.1	0.22	1
16q-Amp	Del_14q11.2	0.22	1
Amp_1q31.1	Del_4q35.1	0.22	1
Amp_20q13.12	Del_5q23.3	0.22	1
Del_1p13.2	Del_16q23.1	0.22	1
CDH1	MVK	0.221	1
GGT1	Amp_8p11.23	0.221	1
12p-Amp	Amp_13q22.1	0.221	1
9p-Amp	Amp_8p11.21	0.221	1
14q-Del	Del_2p12	0.221	1
8p-Del	Del_21q11.2	0.221	1
Del_2q22.1	Del_10q23.31	0.221	1
GGT1	MGA	0.222	1
ERBB2	Del_3p14.2	0.222	1
RBPJ	8q-Amp	0.222	1
BCORL1	Del_5q22.2	0.222	1
BIRC3	21q-Del	0.222	1
12q-Amp	Amp_20q12	0.222	1
Amp_17q24.1	Del_3p14.2	0.222	1
ZFP36L2	WNT1	0.223	1
ZFP36L2	C14orf184	0.223	1
WNT1	RBPJ	0.223	1
WNT1	RBBP7	0.223	1
PRKDC	16p-Amp	0.223	1
RPTN	ALG12	0.223	1
ALG12	RBBP7	0.223	1
ALG12	HLA-A	0.223	1
ALG12	Del_8q11.1	0.223	1
PTCH1	2p-Amp	0.223	1
PTCH1	6p-Amp	0.223	1
C14orf184	16p-Amp	0.223	1
PTGDR	8p-Amp	0.223	1
RNF43	RPTN	0.224	1
FAM123B	CTNNB1	0.224	1
TXNDC2	MPHOSPH10	0.224	1
FMN2	C14orf184	0.224	1
RPTN	4p-Del	0.224	1
ATXN3L	RB1	0.224	1
ERBB2	ST3GAL6	0.224	1
ERBB2	PLEKHF2	0.224	1
RLIM	TOP2B	0.224	1
RB1	L1TD1	0.224	1
ALDH1A3	12p-Amp	0.224	1
17q-Amp	8p-Del	0.224	1
1p-Del	Del_6p25.3	0.224	1
Del_4p16.1	Del_12p13.1	0.224	1
FAM123B	15q-Del	0.225	1
GGT1	VCX2	0.225	1
EGR1	HIST1H1T	0.225	1
TPRKB	ST3GAL6	0.225	1
ST3GAL6	HIST1H1T	0.225	1
PLEKHF2	HIST1H1T	0.225	1
PRRG1	12q-Amp	0.225	1
16q-Amp	Amp_15q26.1	0.225	1
Amp_8p11.23	Del_3q26.31	0.225	1
Amp_20q12	Del_2p12	0.225	1
CRIPAK	STARD3NL	0.226	1
CRIPAK	ROS1	0.226	1
CRIPAK	GPATCH8	0.226	1
CRIPAK	BIRC3	0.226	1
TXNDC2	GMNN	0.226	1
FAM9A	GRB2	0.226	1
FAM9A	RSPH3	0.226	1
THOC7	GRB2	0.226	1
ATXN3L	PLAGL2	0.226	1
GRB2	RSPH3	0.226	1
RSPH3	Del_2q22.1	0.226	1
TOP2B	GMNN	0.226	1
Amp_19q12	Del_2p12	0.226	1
TP53	TXNDC2	0.228	1
SELPLG	C11orf30	0.228	1
SELPLG	15q-Del	0.228	1
MAPK6	Amp_6p21.1	0.228	1
CHUK	FKBP9	0.228	1
C2orf29	Amp_12p13.33	0.228	1
PTEN	PTGDR	0.228	1
ALDH1A3	Amp_12p13.33	0.228	1
Amp_6p21.1	Del_16p13.3	0.228	1
WNT1	Amp_12p13.33	0.229	1
CHUK	BMPR2	0.229	1
BCL9	9p-Amp	0.229	1
ST3GAL6	PTCH1	0.229	1
PLEKHF2	RB1	0.229	1
ASXL1	NLRC4	0.229	1
NLRC4	9p-Amp	0.229	1
ROS1	Amp_15q26.1	0.229	1
C14orf184	Amp_12p13.33	0.229	1
20p-Amp	17p-Del	0.229	1
20p-Amp	Del_10q25.2	0.229	1
Amp_5p12	Del_17p12	0.229	1
Amp_13q12.13	Del_5q23.3	0.229	1
Amp_17q12	Del_5q21.2	0.229	1
TXNDC2	PIK3R1	0.23	1
TXNDC2	Del_4q35.1	0.23	1
GGT1	Del_3p14.2	0.23	1
STARD3NL	22q-Del	0.23	1
NF1	12q-Amp	0.23	1
NF1	9p-Amp	0.23	1
NF1	Amp_6p21.1	0.23	1
20q-Amp	Del_19p13.3	0.23	1
8p-Del	Del_17q24.3	0.23	1
Amp_19q12	Del_12p13.1	0.23	1
Del_3p14.2	Del_18q12.2	0.23	1
Del_3q26.31	Del_12p13.1	0.23	1
CDH1	SELPLG	0.231	1
MAP4K3	IDH1	0.231	1
Del_10q21.1	Del_14q11.2	0.231	1
FMN2	NLRC4	0.232	1
RPTN	BCL9	0.232	1
RPTN	SLC12A6	0.232	1
BCL9	GMPS	0.232	1
PLEKHF2	CREBBP	0.232	1
VCX2	CREBBP	0.232	1
BCORL1	GMPS	0.232	1
ATM	Amp_8p11.23	0.232	1
Amp_16p11.2	Del_17q24.3	0.232	1
Del_6p25.3	Del_18q21.2	0.232	1
SMAD4	4q-Del	0.233	1
20q-Amp	Del_10q23.31	0.233	1
ZFP36L2	8p-Amp	0.234	1
RBPJ	8p-Amp	0.234	1
Del_1p33	Del_12p13.1	0.234	1
TP53	PRRG1	0.235	1
WNT1	RLIM	0.235	1
SELPLG	MGA	0.235	1
MGA	C2orf29	0.235	1
MVK	PRPS1	0.235	1
ALG12	MPHOSPH10	0.235	1
PRRG1	PRPS1	0.235	1
PRRG1	PTGDR	0.235	1
VCX2	18q-Del	0.235	1
9p-Amp	Del_10q23.31	0.235	1
Amp_1q31.1	Amp_20q12	0.235	1
Amp_10q22.3	Del_7q31.1	0.235	1
ZBTB20	PLAGL2	0.236	1
ALG12	8q-Amp	0.236	1
9p-Amp	Amp_13q12.2	0.236	1
Amp_13q22.1	Del_5q22.2	0.236	1
Del_2q22.1	Del_18q22.1	0.236	1
SOX9	ATXN3L	0.237	1
SOX9	L1TD1	0.237	1
SOX9	NEXN	0.237	1
SOX9	Amp_2q33.1	0.237	1
OR4D10	KDM6A	0.237	1
ERBB2	SETD2	0.237	1
PIK3R1	PTGDR	0.237	1
PIK3R1	Del_7q31.1	0.237	1
DDX26B	Del_16q23.1	0.237	1
18q-Del	Del_2p12	0.237	1
Del_3q26.31	Del_5q23.3	0.237	1
BCOR	STARD3NL	0.238	1
BCOR	NR1H3	0.238	1
BCOR	FYN	0.238	1
THOC7	17p-Del	0.238	1
P2RY13	Del_17q24.3	0.238	1
PCBP1	LARP4B	0.238	1
16q-Amp	Del_17q24.3	0.238	1
ARID1A	TPRKB	0.239	1
SOX9	FAM9A	0.239	1
PLEKHF2	Del_22q13.32	0.239	1
NR1H3	ROS1	0.239	1
PCBP1	ROS1	0.239	1
ATM	Del_16p13.3	0.239	1
HIST1H1T	Del_15q11.2	0.239	1
Amp_12p13.33	Del_18q12.2	0.239	1
Del_6p25.3	Del_15q22.33	0.24	1
TPRKB	IQCD	0.241	1
TPRKB	ZNF486	0.241	1
IQCD	HIST1H1T	0.241	1
ASXL1	RLIM	0.241	1
HIST1H1T	ZNF486	0.241	1
9p-Amp	Amp_8p11.23	0.241	1
1p-Del	Amp_17q12	0.241	1
21q-Del	Amp_12p13.33	0.241	1
APC	Amp_8q24.21	0.242	1
RHOA	BMPR2	0.242	1
RHOA	Del_10q25.2	0.242	1
CHUK	ERBB2	0.242	1
PRPS1	CTNNB1	0.242	1
7q-Amp	Del_5q12.1	0.242	1
Amp_17q24.1	Del_3p26.3	0.242	1
APC	MAP4K3	0.243	1
FAM123B	12p-Amp	0.243	1
TXNDC2	SELPLG	0.243	1
TXNDC2	SLC26A8	0.243	1
BCL9	GMNN	0.243	1
NLRC4	GMNN	0.243	1
FKBP9	Del_6p25.3	0.243	1
SLC12A6	GMNN	0.243	1
Del_6p25.3	Del_16p13.3	0.243	1
FAM9A	ST3GAL6	0.244	1
THOC7	ST3GAL6	0.244	1
ST3GAL6	RSPH3	0.244	1
PLEKHF2	RSPH3	0.244	1
PLEKHF2	Del_2q22.1	0.244	1
GRB2	VCX2	0.244	1
20p-Amp	Del_15q15.2	0.244	1
Amp_1q31.1	Del_22q13.32	0.244	1
Amp_8q24.21	Del_15q22.33	0.244	1
Del_7q31.1	Del_17p12	0.244	1
Del_10q25.2	Del_21q11.2	0.244	1
PTEN	Amp_8p11.21	0.245	1
Amp_20p11.21	Del_2q22.1	0.245	1
GGT1	Amp_17q12	0.246	1
PRKDC	VCX2	0.246	1
TPRKB	ASXL1	0.246	1
PLAGL2	Del_12p13.1	0.246	1
C11orf30	Amp_2q33.1	0.246	1
7p-Amp	4p-Del	0.246	1
Del_1p36.11	Del_2p12	0.246	1
APC	Amp_8p11.21	0.247	1
WNT1	MAPK6	0.247	1
WNT1	FKBP9	0.247	1
SELPLG	C14orf184	0.247	1
MAPK6	ALG12	0.247	1
FAM9A	12p-Amp	0.247	1
THOC7	Del_1p13.2	0.247	1
ALG12	SLC26A8	0.247	1
ALG12	FKBP9	0.247	1
ALG12	ALDH1A3	0.247	1
C2orf29	C14orf184	0.247	1
C14orf184	ALDH1A3	0.247	1
12q-Amp	Amp_16p11.2	0.247	1
Amp_8p11.23	Del_5q21.2	0.247	1
Del_1p13.2	Del_2q22.1	0.247	1
Del_5q12.1	Del_15q22.33	0.247	1
ARID1A	BIRC3	0.248	1
MLH1	IDH1	0.248	1
SMAD2	IDH1	0.248	1
FMN2	ATXN3L	0.248	1
GMNN	CTNNB1	0.248	1
17q-Amp	Del_12p13.1	0.248	1
20p-Del	Amp_10q22.3	0.248	1
TXNDC2	BMPR2	0.249	1
BCOR	Del_16q23.1	0.249	1
STARD3NL	PRPS1	0.249	1
STARD3NL	PTGDR	0.249	1
STARD3NL	Del_7q31.1	0.249	1
ATXN3L	Amp_11p15.5	0.249	1
ATXN3L	Del_1p13.2	0.249	1
P2RY13	Amp_8q24.21	0.249	1
P2RY13	Del_7q31.1	0.249	1
DIP2B	KDM6A	0.249	1
PCBP1	PTGDR	0.249	1
DCLK2	PRPS1	0.249	1
DCLK2	PTGDR	0.249	1
DCLK2	Del_7q31.1	0.249	1
FYN	PTGDR	0.249	1
FYN	Del_7q31.1	0.249	1
LARP4B	Del_16q23.1	0.249	1
PTGDR	BIRC3	0.249	1
PTGDR	16q-Amp	0.249	1
20p-Amp	Del_4p16.1	0.249	1
8p-Amp	Del_5q22.2	0.249	1
4q-Del	Del_3q26.31	0.249	1
Del_1p13.2	Del_3q26.31	0.249	1
Del_2q22.1	Del_18q21.2	0.249	1
APC	ALG12	0.25	1
APC	C14orf184	0.25	1
STARD3NL	Del_10q21.1	0.25	1
CHUK	22q-Del	0.25	1
CHUK	Del_4p16.1	0.25	1
P2RY13	Del_10q21.1	0.25	1
NR1H3	12q-Amp	0.25	1
NR1H3	Del_10q21.1	0.25	1
SMAD4	Del_17q24.3	0.25	1
DCLK2	12q-Amp	0.25	1
22q-Del	Amp_6p21.1	0.25	1
Amp_6p21.1	Del_4p16.1	0.25	1
Del_1p36.11	Del_2q22.1	0.25	1
APC	ASXL1	0.251	1
RBPJ	2p-Amp	0.251	1
RBPJ	2q-Amp	0.251	1
Amp_15q26.1	Del_8q11.1	0.251	1
NF2	ALG12	0.252	1
NF2	C14orf184	0.252	1
NF1	2q-Amp	0.252	1
FBXW7	CHUK	0.252	1
14q-Del	Del_5q21.2	0.252	1
20p-Del	Amp_12p13.33	0.252	1
CRIPAK	Del_5q12.1	0.253	1
TPRKB	Amp_8q24.21	0.253	1
RLIM	SLC12A6	0.253	1
APC	PRRG1	0.254	1
APC	Amp_10q22.3	0.254	1
RNF43	TPRKB	0.254	1
ZFP36L2	PIK3R1	0.254	1
GGT1	4p-Del	0.254	1
SELPLG	7q-Amp	0.254	1
PIK3R1	16p-Amp	0.254	1
VCX2	Amp_20q13.12	0.254	1
20q-Amp	Del_5q23.3	0.254	1
7q-Amp	Del_16p13.3	0.254	1
Amp_2q33.1	Del_8p23.2	0.254	1
Amp_8q24.21	Del_3p14.2	0.254	1
MGA	Del_2q22.1	0.256	1
20q-Amp	Amp_1q31.1	0.256	1
SELPLG	SETD2	0.257	1
THOC7	Del_15q15.2	0.257	1
TPRKB	MVK	0.257	1
TPRKB	PRRG1	0.257	1
ALDH1A3	SETD2	0.257	1
Del_2q22.1	Del_15q15.2	0.257	1
Del_6p25.3	Del_8p22	0.257	1
NF1	ERBB2	0.258	1
ALG12	L1TD1	0.258	1
ALG12	CREBBP	0.258	1
ALG12	Del_3q26.31	0.258	1
GRB2	ATM	0.258	1
C14orf184	Del_3q26.31	0.258	1
8p-Del	Del_7q31.1	0.258	1
Amp_5p12	Del_4q35.1	0.258	1
ZFP36L2	ACVR1B	0.259	1
ACVR1B	RPTN	0.259	1
ACVR1B	RBBP7	0.259	1
ACVR1B	HLA-A	0.259	1
RPTN	KDM6A	0.259	1
ST3GAL6	Amp_8p11.21	0.259	1
GRB2	Amp_13q12.2	0.259	1
DIP2B	Del_1p13.2	0.259	1
VCX2	Amp_8p11.21	0.259	1
RBBP7	Del_16q23.1	0.259	1
20q-Amp	6p-Amp	0.259	1
20q-Amp	Amp_15q26.1	0.259	1
7q-Amp	Del_21q21.1	0.259	1
Amp_13q12.13	Del_5q21.2	0.259	1
Amp_13q12.2	Del_2q22.1	0.259	1
Del_8q11.1	Del_16q23.1	0.259	1
Del_10q23.31	Del_12p13.1	0.259	1
TXNDC2	PRKDC	0.26	1
ACVR1B	GMNN	0.26	1
PRKDC	Del_6p25.3	0.26	1
ATXN3L	Del_5q12.1	0.26	1
GMNN	KDM6A	0.26	1
12p-Amp	13q-Amp	0.26	1
Amp_8p11.21	Del_19p13.3	0.26	1
Amp_20p12.1	Del_5q22.2	0.26	1
TP53	Del_10q23.31	0.261	1
SOX9	IDH1	0.261	1
MLH1	7q-Amp	0.261	1
PLAGL2	Amp_8p11.23	0.261	1
VCX2	14q-Del	0.261	1
SMAD4	PTGDR	0.261	1
8p-Del	Del_10q21.1	0.261	1
TXNDC2	NEXN	0.262	1
ACVR1B	ATM	0.262	1
OR4D10	Amp_8p11.21	0.262	1
OR4D10	Del_4p16.1	0.262	1
RHOA	FAM9A	0.262	1
FAM9A	IFT57	0.262	1
FAM9A	ZNF486	0.262	1
THOC7	IQCD	0.262	1
NF1	Amp_8q24.21	0.262	1
ATXN3L	Del_6p25.3	0.262	1
ATXN3L	Del_19p13.3	0.262	1
TPRKB	8p-Amp	0.262	1
IQCD	GRB2	0.262	1
IFT57	RSPH3	0.262	1
RSPH3	ZNF486	0.262	1
MPHOSPH10	8p-Amp	0.262	1
L1TD1	Del_6p25.3	0.262	1
BMPR2	8p-Amp	0.262	1
CDK12	16q-Amp	0.262	1
7q-Amp	Del_6p25.3	0.262	1
Amp_19q12	Del_19p13.3	0.262	1
Del_3q26.31	Del_6q26	0.262	1
TXNDC2	ERBB2	0.263	1
CDH1	NR1H3	0.263	1
CDH1	PCBP1	0.263	1
RHOA	Del_1p33	0.263	1
Amp_1q31.1	Del_6q26	0.263	1
Amp_1q31.1	Del_19p13.3	0.263	1
Amp_17q24.1	Del_19p13.3	0.263	1
ARID1A	FBXW7	0.264	1
TP53	NEXN	0.264	1
SOX9	FMN2	0.264	1
FMN2	Amp_10q22.3	0.264	1
OR4D10	PRPS1	0.264	1
NF2	SLC26A8	0.264	1
EGR1	PLEKHF2	0.264	1
PLEKHF2	VCX2	0.264	1
RLIM	6p-Amp	0.264	1
C2orf29	Del_4q35.1	0.264	1
DDX26B	PRPS1	0.264	1
13q-Amp	Del_1p33	0.264	1
1p-Del	Amp_15q26.1	0.264	1
Amp_13q12.13	Del_10q25.2	0.264	1
Amp_13q22.1	Del_2q22.1	0.264	1
Del_6p25.3	Del_18q12.2	0.264	1
SOX9	12q-Amp	0.265	1
TXNDC2	PLAGL2	0.265	1
TXNDC2	21q-Del	0.265	1
GGT1	FBXW7	0.265	1
FAM9A	Del_3p14.2	0.265	1
NF1	ST3GAL6	0.265	1
CHUK	ZBTB20	0.265	1
RSPH3	Del_3p14.2	0.265	1
12q-Amp	Del_16q23.1	0.265	1
21q-Del	Del_6p25.3	0.265	1
Del_2p12	Del_6q26	0.265	1
Del_2p12	Del_19p13.3	0.265	1
Del_5q21.2	Del_6p25.3	0.265	1
MLH1	8p-Del	0.266	1
VCX2	SMAD4	0.266	1
SMAD4	BIRC3	0.266	1
SMAD4	7q-Amp	0.266	1
Amp_1q31.1	Del_15q11.2	0.266	1
Amp_20p11.21	Del_7q31.1	0.266	1
CDH1	Amp_2q33.1	0.267	1
NF1	Del_5q21.2	0.267	1
SELPLG	ASXL1	0.268	1
ASXL1	ALDH1A3	0.268	1
6p-Amp	Del_5q22.2	0.268	1
17p-Del	Amp_20p12.1	0.268	1
Amp_8q24.21	Del_10q23.31	0.268	1
FAM123B	SMAD4	0.269	1
WNT1	ZBTB20	0.269	1
WNT1	MAP4K3	0.269	1
FBXW7	L1TD1	0.269	1
FBXW7	NEXN	0.269	1
ALG12	IDH1	0.269	1
C14orf184	IDH1	0.269	1
20p-Amp	Del_15q22.33	0.269	1
Amp_17q24.1	Del_21q11.2	0.269	1
WNT1	PRKDC	0.27	1
THOC7	Amp_8p11.23	0.27	1
GRB2	Amp_8p11.23	0.27	1
18p-Del	Del_3p14.2	0.27	1
Amp_2q33.1	Del_18q12.2	0.27	1
Amp_8p11.23	Del_2q22.1	0.27	1
Amp_20p11.21	Del_3p14.2	0.27	1
Del_6p25.3	Del_21q11.2	0.27	1
APC	Del_10q23.31	0.271	1
MGA	Amp_8p11.23	0.271	1
8q-Amp	Del_4q35.1	0.271	1
Amp_8p11.23	Del_5q12.1	0.271	1
CRIPAK	HLA-A	0.272	1
ROS1	12q-Amp	0.272	1
CTNNB1	Amp_6p21.1	0.272	1
8p-Amp	Del_18q21.2	0.272	1
15q-Del	Amp_10q22.3	0.272	1
Amp_2q33.1	Del_3p14.2	0.272	1
TP53	Amp_6p21.1	0.273	1
ACVR1B	ALPK2	0.273	1
GGT1	DCLK2	0.273	1
SELPLG	Del_15q22.33	0.273	1
MAPK6	BCORL1	0.273	1
RPTN	PTCH1	0.273	1
TPRKB	P2RY13	0.273	1
TPRKB	DCLK2	0.273	1
TPRKB	GPATCH8	0.273	1
TPRKB	16q-Amp	0.273	1
P2RY13	HIST1H1T	0.273	1
NLRC4	C2orf29	0.273	1
FYN	HIST1H1T	0.273	1
ALDH1A3	SLC12A6	0.273	1
BIRC3	HIST1H1T	0.273	1
12p-Amp	17q-Amp	0.273	1
20p-Del	Del_10q23.31	0.273	1
Del_15q22.33	Del_16p13.3	0.273	1
FAM123B	PCBP1	0.274	1
ROS1	PRPS1	0.274	1
ROS1	Del_7q31.1	0.274	1
FYN	20p-Del	0.274	1
APC	L1TD1	0.275	1
APC	5q-Del	0.275	1
APC	Amp_19q12	0.275	1
PLAGL2	Amp_5p12	0.275	1
Amp_11p15.5	Amp_13q12.13	0.275	1
Amp_15q26.1	Del_18q12.2	0.275	1
Del_12p13.1	Del_15q15.2	0.275	1
TP53	HIST1H1T	0.276	1
BCOR	GMNN	0.276	1
NF2	CDK12	0.276	1
DIP2B	GMNN	0.276	1
RB1	Del_5q22.2	0.276	1
SELPLG	2p-Amp	0.277	1
SELPLG	2q-Amp	0.277	1
SELPLG	Amp_15q26.1	0.277	1
MAPK6	6p-Amp	0.277	1
C2orf29	6p-Amp	0.277	1
SLC26A8	2p-Amp	0.277	1
SLC26A8	2q-Amp	0.277	1
ALDH1A3	6p-Amp	0.277	1
8q-Amp	Del_2q22.1	0.277	1
Amp_1q31.1	Amp_17q24.1	0.277	1
Amp_20q13.12	Del_3p26.3	0.277	1
Del_1p33	Del_10q25.2	0.277	1
ZFP36L2	PRPS1	0.278	1
B2M	PTGDR	0.278	1
RPTN	PRPS1	0.278	1
VCX2	Del_18q12.2	0.278	1
RBBP7	PTGDR	0.278	1
HLA-A	PTGDR	0.278	1
GMPS	PRPS1	0.278	1
GMPS	Del_7q31.1	0.278	1
TXNDC2	Del_18p11.31	0.279	1
THOC7	MVK	0.279	1
THOC7	Amp_10q22.3	0.279	1
BCL9	PIK3R1	0.279	1
GRB2	Amp_10q22.3	0.279	1
RSPH3	Amp_10q22.3	0.279	1
ROS1	Amp_12p13.33	0.279	1
SMAD4	Del_22q13.32	0.279	1
PTGDR	Amp_13q12.2	0.279	1
20p-Amp	Del_21q11.2	0.279	1
6p-Amp	Amp_20q11.21	0.279	1
8p-Amp	Amp_13q22.1	0.279	1
Amp_10q22.3	Del_2q22.1	0.279	1
Amp_15q26.1	Amp_20q11.21	0.279	1
Del_6q26	Del_18p11.31	0.279	1
SOX9	12p-Amp	0.28	1
SMAD2	C14orf184	0.28	1
WNT1	Del_12p13.1	0.28	1
12q-Amp	Amp_11p15.5	0.28	1
17p-Del	Del_2p12	0.28	1
Amp_5p12	Del_18q22.1	0.28	1
RHOA	PTCH1	0.281	1
RHOA	RB1	0.281	1
RHOA	Del_22q13.32	0.281	1
EGR1	12p-Amp	0.281	1
ST3GAL6	12p-Amp	0.281	1
PLEKHF2	Amp_11p15.5	0.281	1
PRRG1	Amp_1q31.1	0.281	1
RLIM	KDM6A	0.281	1
MPHOSPH10	KDM6A	0.281	1
VCX2	Del_1p13.2	0.281	1
MAP4K3	Del_6p25.3	0.281	1
17q-Amp	Del_6q26	0.281	1
15q-Del	Amp_15q26.1	0.281	1
1p-Del	Del_16q23.1	0.281	1
Amp_1q31.1	Amp_10q22.3	0.281	1
Amp_10q22.3	Del_21q21.1	0.281	1
Amp_12p13.33	Amp_15q26.1	0.281	1
RHOA	EGR1	0.282	1
EGR1	ZNF486	0.282	1
ST3GAL6	IQCD	0.282	1
ST3GAL6	IFT57	0.282	1
SMAD4	Del_5q21.2	0.282	1
RB1	GMNN	0.282	1
20p-Amp	15q-Del	0.282	1
8p-Amp	Amp_1q31.1	0.282	1
14q-Del	Del_17q24.3	0.282	1
Del_3p26.3	Del_10q23.31	0.282	1
ARID1A	Amp_8p11.23	0.283	1
ACVR1B	CTNNB1	0.283	1
SMAD2	CHUK	0.283	1
C11orf30	Del_12p13.1	0.283	1
RSPH3	Amp_17q12	0.283	1
CTNNB1	Del_16q23.1	0.283	1
Amp_20q12	Del_2q22.1	0.283	1
Del_3p26.3	Del_12p13.1	0.283	1
FAM123B	MLH1	0.284	1
SOX9	CDH1	0.284	1
RPTN	Del_5q21.2	0.284	1
BCL9	PLAGL2	0.284	1
NLRC4	PLAGL2	0.284	1
PIK3R1	RLIM	0.284	1
SETD2	Del_3q26.31	0.284	1
GMNN	9p-Amp	0.284	1
8q-Amp	Del_15q11.2	0.284	1
Amp_1q31.1	Amp_5p12	0.284	1
Amp_5p12	Amp_17q24.1	0.284	1
Del_12p13.1	Del_15q21.1	0.284	1
B2M	DIP2B	0.286	1
BCOR	RBPJ	0.286	1
BCOR	RBBP7	0.286	1
FMN2	Del_1p13.2	0.286	1
EGR1	PTEN	0.286	1
PRKDC	12q-Amp	0.286	1
ST3GAL6	PTEN	0.286	1
DIP2B	RBPJ	0.286	1
VCX2	Del_18p11.31	0.286	1
RBPJ	LARP4B	0.286	1
RBBP7	Del_17q24.3	0.286	1
GMNN	Del_18p11.31	0.286	1
16p-Amp	Del_17q24.3	0.286	1
20q-Amp	Del_3p26.3	0.286	1
1p-Del	Amp_13q22.1	0.286	1
RNF43	KDM6A	0.287	1
RNF43	Del_16q23.1	0.287	1
20p-Amp	Del_10q23.31	0.287	1
Amp_13q12.2	Del_10q23.31	0.287	1
FBXW7	GMPS	0.288	1
PTCH1	8p-Amp	0.288	1
12p-Amp	Amp_20q13.12	0.288	1
8p-Amp	Del_17p12	0.288	1
BCOR	Del_3p14.2	0.289	1
MAPK6	Amp_16p11.2	0.289	1
TPRKB	DDX26B	0.289	1
DDX26B	HIST1H1T	0.289	1
NEXN	6p-Amp	0.289	1
NEXN	Amp_15q26.1	0.289	1
2p-Amp	Del_3q26.31	0.289	1
6p-Amp	Amp_2q33.1	0.289	1
6p-Amp	Del_3q26.31	0.289	1
ZFP36L2	Del_15q15.2	0.29	1
CDH1	ERBB2	0.29	1
THOC7	Del_15q11.2	0.29	1
Del_2q22.1	Del_15q11.2	0.29	1
SELPLG	8p-Amp	0.291	1
EGR1	MGA	0.291	1
CHUK	ALG12	0.291	1
CHUK	C14orf184	0.291	1
VCX2	Del_5q12.1	0.291	1
C14orf184	Amp_6p21.1	0.291	1
ALDH1A3	8p-Amp	0.291	1
Amp_12p13.33	Del_1p36.11	0.291	1
THOC7	4p-Del	0.292	1
RLIM	PRPS1	0.292	1
MPHOSPH10	PTGDR	0.292	1
MPHOSPH10	Del_7q31.1	0.292	1
CDK12	GMNN	0.292	1
PTGDR	1p-Del	0.292	1
12q-Amp	Amp_13q12.13	0.292	1
12q-Amp	Amp_20q13.12	0.292	1
9p-Amp	Amp_13q12.13	0.292	1
APC	IFT57	0.293	1
GRB2	Amp_13q12.13	0.293	1
18q-Del	Del_16p13.3	0.293	1
Amp_16p11.2	Del_4q22.1	0.293	1
ATXN3L	BCORL1	0.294	1
ATXN3L	SLC12A6	0.294	1
BCORL1	NEXN	0.294	1
7p-Amp	Del_21q21.1	0.294	1
Amp_16p11.2	Del_2p12	0.294	1
ZFP36L2	22q-Del	0.295	1
RBBP7	Del_4p16.1	0.295	1
16p-Amp	22q-Del	0.295	1
20p-Amp	8p-Del	0.295	1
Amp_1q31.1	Del_1p33	0.295	1
Del_5q12.1	Del_10q21.1	0.295	1
CRIPAK	RLIM	0.296	1
CRIPAK	MPHOSPH10	0.296	1
RNF43	SMAD4	0.296	1
STARD3NL	GRB2	0.296	1
FAM9A	NR1H3	0.296	1
FAM9A	DCLK2	0.296	1
FAM9A	FYN	0.296	1
P2RY13	RSPH3	0.296	1
P2RY13	Del_2q22.1	0.296	1
NR1H3	RSPH3	0.296	1
ALPK2	Del_3q26.31	0.296	1
ASXL1	NEXN	0.296	1
ASXL1	5q-Del	0.296	1
GRB2	PCBP1	0.296	1
GRB2	DCLK2	0.296	1
GRB2	FYN	0.296	1
GRB2	BIRC3	0.296	1
GRB2	16q-Amp	0.296	1
RSPH3	GPATCH8	0.296	1
RSPH3	BIRC3	0.296	1
GPATCH8	Del_2q22.1	0.296	1
16q-Amp	Del_2q22.1	0.296	1
5q-Del	Amp_17q12	0.296	1
IQCD	Del_21q11.2	0.297	1
8q-Amp	Del_15q22.33	0.297	1
15q-Del	Del_16q23.1	0.297	1
ZFP36L2	Del_15q21.1	0.298	1
B2M	Del_15q21.1	0.298	1
SMAD2	Amp_11p15.5	0.298	1
STARD3NL	BMPR2	0.298	1
STARD3NL	Del_10q25.2	0.298	1
NF2	L1TD1	0.298	1
NF2	5q-Del	0.298	1
NF1	Amp_8p11.21	0.298	1
ZBTB20	Del_3p14.2	0.298	1
BMPR2	FYN	0.298	1
17q-Amp	Amp_5p12	0.298	1
17q-Amp	Del_3p14.2	0.298	1
20p-Amp	Del_1p36.11	0.298	1
7q-Amp	Del_21q11.2	0.298	1
9p-Amp	Amp_20q11.21	0.298	1
20p-Del	Amp_8p11.23	0.298	1
4q-Del	Amp_11p15.5	0.298	1
Amp_6p21.1	Del_18q21.2	0.298	1
Amp_8p11.23	Del_5q22.2	0.298	1
Amp_8q24.21	Amp_15q26.1	0.298	1
Amp_11p15.5	Del_12p13.1	0.298	1
Amp_19q12	Del_4q35.1	0.298	1
FAM123B	BCOR	0.3	1
ZFP36L2	12q-Amp	0.3	1
ZFP36L2	Del_10q21.1	0.3	1
TXNDC2	SMAD2	0.3	1
TXNDC2	Del_12p13.1	0.3	1
MLH1	DIP2B	0.3	1
SMAD2	Del_19p13.3	0.3	1
GGT1	CTNNB1	0.3	1
RBPJ	12q-Amp	0.3	1
RBPJ	9p-Amp	0.3	1
GMNN	Del_17p12	0.3	1
Amp_13q12.2	Del_3p14.2	0.3	1
CRIPAK	CDK12	0.301	1
EGR1	PRRG1	0.301	1
MVK	PLEKHF2	0.301	1
PLEKHF2	PRRG1	0.301	1
PRRG1	VCX2	0.301	1
VCX2	Amp_10q22.3	0.301	1
Amp_20q13.12	Del_8q11.1	0.301	1
TXNDC2	ALG12	0.302	1
TXNDC2	C14orf184	0.302	1
BCOR	12q-Amp	0.302	1
BCOR	9p-Amp	0.302	1
FMN2	STARD3NL	0.302	1
FMN2	NR1H3	0.302	1
FMN2	BIRC3	0.302	1
FMN2	16q-Amp	0.302	1
ZBTB20	Amp_15q26.1	0.302	1
ALPK2	8p-Amp	0.302	1
DIP2B	12q-Amp	0.302	1
DIP2B	Del_10q21.1	0.302	1
IFT57	ZNF486	0.302	1
C14orf184	Del_6p25.3	0.302	1
C14orf184	Del_6q26	0.302	1
LARP4B	12q-Amp	0.302	1
13q-Amp	Amp_2q33.1	0.302	1
17q-Amp	6p-Amp	0.302	1
17q-Amp	Amp_15q26.1	0.302	1
Del_16p13.3	Del_21q11.2	0.302	1
ACVR1B	PLAGL2	0.303	1
GGT1	21q-Del	0.303	1
HIST1H1T	21q-Del	0.303	1
22q-Del	Amp_5p12	0.303	1
Amp_5p12	Del_4p16.1	0.303	1
FAM123B	PTGDR	0.304	1
ZFP36L2	TPRKB	0.304	1
B2M	HIST1H1T	0.304	1
ACVR1B	MAPK6	0.304	1
ACVR1B	FKBP9	0.304	1
BCOR	SETD2	0.304	1
GGT1	RBPJ	0.304	1
GGT1	16p-Amp	0.304	1
MAPK6	KDM6A	0.304	1
RPTN	HIST1H1T	0.304	1
TPRKB	RBPJ	0.304	1
TPRKB	GMPS	0.304	1
RBPJ	HIST1H1T	0.304	1
SLC26A8	Del_16q23.1	0.304	1
RBBP7	HIST1H1T	0.304	1
HIST1H1T	Del_8q11.1	0.304	1
6p-Amp	Amp_20q12	0.304	1
Amp_15q26.1	Amp_20q12	0.304	1
APC	PLAGL2	0.305	1
SOX9	RHOA	0.305	1
VCX2	Del_15q15.2	0.305	1
Amp_20p12.1	Del_19p13.3	0.305	1
ERBB2	NLRC4	0.306	1
C2orf29	PRPS1	0.306	1
SLC26A8	Del_7q31.1	0.306	1
FKBP9	PRPS1	0.306	1
ALDH1A3	Del_7q31.1	0.306	1
PTGDR	Del_16p13.3	0.306	1
Del_7q31.1	Del_16p13.3	0.306	1
ZFP36L2	Amp_8p11.23	0.307	1
VCX2	Del_17p12	0.307	1
16p-Amp	Amp_8p11.23	0.307	1
20p-Amp	Amp_15q26.1	0.307	1
Amp_13q12.13	Del_5q22.2	0.307	1
ATXN3L	Del_15q22.33	0.308	1
FAM123B	Del_15q22.33	0.309	1
CTNNB1	Del_6p25.3	0.309	1
CTNNB1	Del_6q26	0.309	1
21q-Del	Amp_11p15.5	0.309	1
APC	SELPLG	0.31	1
APC	Del_15q21.1	0.31	1
FAM123B	DDX26B	0.31	1
ERBB2	P2RY13	0.31	1
ERBB2	BIRC3	0.31	1
ERBB2	16q-Amp	0.31	1
NR1H3	Amp_1q31.1	0.31	1
DIP2B	1p-Del	0.31	1
16q-Amp	Amp_1q31.1	0.31	1
8p-Del	Amp_8p11.23	0.31	1
Amp_6p21.1	Del_5q23.3	0.31	1
Amp_16p11.2	Del_3q26.31	0.31	1
FMN2	ERBB2	0.311	1
GGT1	22q-Del	0.311	1
GGT1	Del_4p16.1	0.311	1
NR1H3	Amp_12p13.33	0.311	1
VCX2	17p-Del	0.311	1
SETD2	IDH1	0.311	1
PTGDR	Amp_13q12.13	0.311	1
CTNNB1	Del_5q21.2	0.311	1
12q-Amp	Del_3p14.2	0.311	1
16q-Amp	15q-Del	0.311	1
8p-Amp	17p-Del	0.311	1
14q-Del	Del_16p13.3	0.311	1
CRIPAK	PLAGL2	0.312	1
VCX2	Del_14q11.2	0.312	1
VCX2	Del_15q21.1	0.312	1
20p-Amp	Del_5q21.2	0.312	1
WNT1	Amp_5p12	0.313	1
OR4D10	FAM9A	0.313	1
OR4D10	THOC7	0.313	1
OR4D10	RSPH3	0.313	1
ALG12	Amp_5p12	0.313	1
GRB2	DDX26B	0.313	1
SMAD4	Del_12p13.1	0.313	1
KDM6A	Amp_8p11.23	0.313	1
8q-Amp	Amp_15q26.1	0.313	1
TP53	FMN2	0.314	1
SMAD2	2q-Amp	0.314	1
SMAD2	6p-Amp	0.314	1
8p-Del	Amp_11p15.5	0.314	1
Amp_8p11.21	Del_1p36.11	0.314	1
Amp_15q26.1	Del_15q22.33	0.314	1
SOX9	Del_3p14.2	0.315	1
IQCD	12p-Amp	0.315	1
SMAD4	Amp_8p11.23	0.315	1
SLC12A6	IDH1	0.315	1
ZNF486	Amp_8p11.21	0.315	1
Del_3p14.2	Del_5q23.3	0.315	1
NF2	Del_4q35.1	0.316	1
NF1	12p-Amp	0.316	1
MGA	12p-Amp	0.316	1
RLIM	Del_5q21.2	0.316	1
SMAD4	22q-Del	0.316	1
Amp_2q33.1	Del_8p22	0.316	1
Amp_12p13.33	Del_21q21.1	0.316	1
NF2	Amp_16p11.2	0.317	1
GMNN	18p-Del	0.317	1
Amp_10q22.3	Amp_20p12.1	0.317	1
APC	Amp_5p12	0.318	1
CRIPAK	CTNNB1	0.318	1
ZFP36L2	NF1	0.318	1
SMAD2	Amp_5p12	0.318	1
SELPLG	7p-Amp	0.318	1
NF1	16p-Amp	0.318	1
PRPS1	Del_5q22.2	0.318	1
20p-Amp	Del_21q21.1	0.318	1
20q-Amp	5q-Del	0.318	1
CRIPAK	SLC26A8	0.319	1
CRIPAK	ALDH1A3	0.319	1
CRIPAK	Del_16p13.3	0.319	1
GGT1	ROS1	0.319	1
GGT1	1p-Del	0.319	1
STARD3NL	ST3GAL6	0.319	1
STARD3NL	PLEKHF2	0.319	1
EGR1	NR1H3	0.319	1
EGR1	PCBP1	0.319	1
EGR1	DCLK2	0.319	1
EGR1	FYN	0.319	1
EGR1	GPATCH8	0.319	1
TPRKB	RLIM	0.319	1
ST3GAL6	PCBP1	0.319	1
ST3GAL6	FYN	0.319	1
PLEKHF2	DCLK2	0.319	1
PLEKHF2	FYN	0.319	1
PLEKHF2	BIRC3	0.319	1
PIK3R1	Del_2q22.1	0.319	1
ROS1	HIST1H1T	0.319	1
VCX2	GPATCH8	0.319	1
VCX2	Amp_8p11.23	0.319	1
L1TD1	PRPS1	0.319	1
L1TD1	Del_7q31.1	0.319	1
PRPS1	5q-Del	0.319	1
PRPS1	Amp_19q12	0.319	1
PTGDR	Amp_19q12	0.319	1
HIST1H1T	1p-Del	0.319	1
CTNNB1	7q-Amp	0.319	1
Amp_17q12	Del_17q24.3	0.319	1
TXNDC2	CHUK	0.32	1
EGR1	ASXL1	0.32	1
SMAD4	FKBP9	0.32	1
ATM	Del_7q31.1	0.32	1
8p-Amp	Del_3q26.31	0.32	1
Amp_8q24.21	Del_19p13.3	0.32	1
BCOR	PLAGL2	0.321	1
RHOA	NF1	0.321	1
PLAGL2	DIP2B	0.321	1
C2orf29	8p-Del	0.321	1
APC	Del_10q21.1	0.322	1
FAM123B	Del_5q22.2	0.322	1
STARD3NL	Del_1p33	0.322	1
RHOA	PRRG1	0.322	1
RHOA	Amp_10q22.3	0.322	1
IQCD	Amp_10q22.3	0.322	1
PRRG1	IFT57	0.322	1
IFT57	Amp_10q22.3	0.322	1
ZNF486	Amp_10q22.3	0.322	1
17p-Del	Amp_16p11.2	0.322	1
20p-Del	4q-Del	0.322	1
Amp_20q11.21	Del_3p26.3	0.322	1
APC	MGA	0.323	1
WNT1	BCL9	0.323	1
WNT1	NLRC4	0.323	1
WNT1	SLC12A6	0.323	1
ALG12	NLRC4	0.323	1
ALG12	SLC12A6	0.323	1
C14orf184	BCORL1	0.323	1
GMNN	Amp_17q24.1	0.323	1
MGA	Amp_12p13.33	0.324	1
ASXL1	MAP4K3	0.324	1
GRB2	7q-Amp	0.324	1
RLIM	12q-Amp	0.324	1
MPHOSPH10	9p-Amp	0.324	1
IDH1	Amp_17q12	0.324	1
8p-Amp	Del_18q12.2	0.324	1
1p-Del	Del_10q21.1	0.324	1
Amp_6p21.1	Del_1p13.2	0.324	1
TP53	Del_12p13.1	0.325	1
Amp_13q12.13	Del_5q12.1	0.325	1
Del_3p14.2	Del_12p13.1	0.325	1
ACVR1B	NEXN	0.326	1
ACVR1B	Amp_2q33.1	0.326	1
MLH1	12q-Amp	0.326	1
FMN2	PRPS1	0.326	1
RHOA	MGA	0.326	1
CHUK	6p-Amp	0.326	1
ATXN3L	KDM6A	0.326	1
C11orf30	2p-Amp	0.326	1
C11orf30	2q-Amp	0.326	1
ZNF486	Del_5q12.1	0.326	1
5q-Del	Del_16q23.1	0.326	1
Amp_2q33.1	Del_16q23.1	0.326	1
Amp_15q26.1	Del_3p26.3	0.326	1
Amp_15q26.1	Del_18q22.1	0.326	1
Amp_12p13.33	Del_18q21.2	0.327	1
ACVR1B	PIK3R1	0.328	1
PRKDC	ATXN3L	0.328	1
PRKDC	6p-Amp	0.328	1
PTCH1	Amp_8q24.21	0.328	1
PIK3R1	Del_16q23.1	0.328	1
SMAD4	BMPR2	0.328	1
7p-Amp	4q-Del	0.328	1
8q-Amp	Amp_11p15.5	0.328	1
ZFP36L2	GRB2	0.329	1
ZFP36L2	Del_2q22.1	0.329	1
FAM9A	RPTN	0.329	1
RPTN	THOC7	0.329	1
RPTN	RSPH3	0.329	1
THOC7	RBBP7	0.329	1
THOC7	GMPS	0.329	1
THOC7	16p-Amp	0.329	1
THOC7	Del_8q11.1	0.329	1
GRB2	HLA-A	0.329	1
PCBP1	Del_4q22.1	0.329	1
RSPH3	RBBP7	0.329	1
RSPH3	GMPS	0.329	1
RBPJ	Del_2q22.1	0.329	1
CTNNB1	Del_10q23.31	0.329	1
16p-Amp	Del_2q22.1	0.329	1
RNF43	PLEKHF2	0.33	1
TP53	Amp_5p12	0.33	1
PLAGL2	12q-Amp	0.33	1
12q-Amp	Del_2p12	0.33	1
Amp_6p21.1	Del_5q22.2	0.33	1
8q-Amp	Del_3p26.3	0.331	1
Amp_1q31.1	Del_10q23.31	0.331	1
Amp_17q24.1	Del_10q23.31	0.331	1
FBXW7	ASXL1	0.332	1
ASXL1	Del_15q21.1	0.332	1
Del_10q25.2	Del_16q23.1	0.332	1
ZFP36L2	Del_15q11.2	0.333	1
SMAD4	Del_5q22.2	0.333	1
PTEN	16q-Amp	0.333	1
PRPS1	IDH1	0.333	1
PRPS1	Amp_12p13.33	0.333	1
CTNNB1	Del_3p14.2	0.333	1
17q-Amp	Del_7q31.1	0.333	1
BCOR	SLC26A8	0.334	1
BCOR	Del_16p13.3	0.334	1
GGT1	SLC26A8	0.334	1
GGT1	Del_16p13.3	0.334	1
SELPLG	TPRKB	0.334	1
SELPLG	LARP4B	0.334	1
SELPLG	HIST1H1T	0.334	1
MAPK6	HIST1H1T	0.334	1
RHOA	SMAD4	0.334	1
TPRKB	SLC26A8	0.334	1
TPRKB	ALDH1A3	0.334	1
TPRKB	Del_16p13.3	0.334	1
PTCH1	Amp_10q22.3	0.334	1
DIP2B	C2orf29	0.334	1
VCX2	18p-Del	0.334	1
VCX2	Amp_20p11.21	0.334	1
C2orf29	LARP4B	0.334	1
RB1	Amp_10q22.3	0.334	1
FKBP9	HIST1H1T	0.334	1
C14orf184	Amp_16p11.2	0.334	1
HIST1H1T	Del_16p13.3	0.334	1
8p-Amp	18q-Del	0.334	1
Del_16p13.3	Del_17q24.3	0.334	1
SOX9	TXNDC2	0.335	1
FBXW7	RSPH3	0.335	1
Amp_20q12	Del_10q23.31	0.335	1
FAM123B	TXNDC2	0.336	1
SMAD2	NLRC4	0.336	1
OR4D10	PLEKHF2	0.336	1
OR4D10	VCX2	0.336	1
BCL9	Del_12p13.1	0.336	1
IQCD	Del_3p14.2	0.336	1
VCX2	DDX26B	0.336	1
CTNNB1	7p-Amp	0.336	1
20p-Amp	Del_6p25.3	0.336	1
Del_6p25.3	Del_8p23.2	0.336	1
TXNDC2	Amp_15q26.1	0.337	1
6p-Amp	Del_19p13.3	0.337	1
Amp_8q24.21	Del_2q22.1	0.337	1
Amp_15q26.1	Del_6q26	0.337	1
Amp_15q26.1	Del_19p13.3	0.337	1
APC	ST3GAL6	0.338	1
TP53	9p-Amp	0.338	1
SMAD2	SETD2	0.338	1
NF2	Del_5q23.3	0.338	1
PRRG1	Del_5q23.3	0.338	1
L1TD1	CTNNB1	0.338	1
CTNNB1	Amp_19q12	0.338	1
20p-Del	Del_17q24.3	0.338	1
Amp_5p12	Amp_6p21.1	0.338	1
Del_3p14.2	Del_15q11.2	0.338	1
Del_3q26.31	Del_21q11.2	0.338	1
TXNDC2	TOP2B	0.339	1
RLIM	CDK12	0.339	1
BCORL1	Amp_8p11.21	0.339	1
EGR1	8p-Amp	0.34	1
Amp_15q26.1	Del_18q21.2	0.34	1
STARD3NL	IQCD	0.341	1
STARD3NL	ZNF486	0.341	1
SELPLG	Amp_8q24.21	0.341	1
RHOA	P2RY13	0.341	1
RHOA	NR1H3	0.341	1
RHOA	PCBP1	0.341	1
RHOA	FYN	0.341	1
RHOA	GPATCH8	0.341	1
FAM9A	Amp_20p12.1	0.341	1
P2RY13	ZNF486	0.341	1
ST3GAL6	8q-Amp	0.341	1
IQCD	NR1H3	0.341	1
IQCD	PCBP1	0.341	1
IQCD	DCLK2	0.341	1
NR1H3	ZNF486	0.341	1
PCBP1	ZNF486	0.341	1
VCX2	Del_18q22.1	0.341	1
DCLK2	ZNF486	0.341	1
BIRC3	ZNF486	0.341	1
ZNF486	16q-Amp	0.341	1
2p-Amp	14q-Del	0.341	1
2q-Amp	14q-Del	0.341	1
Amp_10q22.3	Del_21q11.2	0.341	1
Amp_16p11.2	Del_22q13.32	0.341	1
ARID1A	PLEKHF2	0.342	1
ARID1A	VCX2	0.342	1
12q-Amp	Amp_17q12	0.342	1
NR1H3	ATM	0.343	1
ACVR1B	ALG12	0.344	1
WNT1	Del_16q23.1	0.344	1
PIK3R1	5q-Del	0.344	1
C14orf184	KDM6A	0.344	1
6p-Amp	Amp_20q13.12	0.344	1
8p-Amp	Amp_13q12.13	0.344	1
Amp_15q26.1	Amp_20q13.12	0.344	1
Del_6p25.3	Del_15q15.2	0.344	1
FAM9A	RLIM	0.345	1
ALG12	SMAD4	0.345	1
GRB2	1p-Del	0.345	1
GRB2	Del_5q21.2	0.345	1
RSPH3	MPHOSPH10	0.345	1
1p-Del	Del_2q22.1	0.345	1
Amp_17q12	Amp_20p12.1	0.345	1
TP53	ASXL1	0.346	1
ZFP36L2	MLH1	0.346	1
ACVR1B	NF2	0.346	1
MLH1	GMPS	0.346	1
FYN	Del_10q23.31	0.346	1
8p-Amp	Del_18q22.1	0.346	1
APC	Del_15q11.2	0.347	1
SOX9	PTCH1	0.347	1
STARD3NL	Del_4q35.1	0.347	1
NF2	NR1H3	0.347	1
RHOA	SETD2	0.347	1
SETD2	ZNF486	0.347	1
7q-Amp	4p-Del	0.347	1
APC	RLIM	0.348	1
TP53	PRKDC	0.348	1
ACVR1B	17q-Amp	0.348	1
GGT1	ATXN3L	0.348	1
GGT1	5q-Del	0.348	1
GGT1	Amp_2q33.1	0.348	1
GGT1	Amp_19q12	0.348	1
ATXN3L	14q-Del	0.348	1
TPRKB	L1TD1	0.348	1
TPRKB	NEXN	0.348	1
TPRKB	Del_3q26.31	0.348	1
L1TD1	HIST1H1T	0.348	1
NEXN	HIST1H1T	0.348	1
IDH1	KDM6A	0.348	1
13q-Amp	9p-Amp	0.348	1
16q-Amp	8p-Del	0.348	1
20p-Del	Del_2p12	0.348	1
Del_5q21.2	Del_16p13.3	0.348	1
TXNDC2	4q-Del	0.349	1
TXNDC2	Amp_11p15.5	0.349	1
MAPK6	12q-Amp	0.349	1
THOC7	20p-Amp	0.349	1
ERBB2	Del_16q23.1	0.349	1
SLC26A8	12q-Amp	0.349	1
TOP2B	12p-Amp	0.349	1
FKBP9	Del_10q21.1	0.349	1
IDH1	8p-Amp	0.349	1
12p-Amp	Del_6q26	0.349	1
12q-Amp	Del_16p13.3	0.349	1
2p-Amp	Amp_5p12	0.349	1
2q-Amp	Amp_5p12	0.349	1
8p-Amp	Del_17q24.3	0.349	1
4q-Del	Amp_10q22.3	0.349	1
4q-Del	Del_6p25.3	0.349	1
Amp_5p12	Amp_15q26.1	0.349	1
Amp_11p15.5	Del_6q26	0.349	1
Amp_11p15.5	Del_19p13.3	0.349	1
Del_1p13.2	Del_6p25.3	0.349	1
Del_2q22.1	Del_8p23.2	0.349	1
Del_10q21.1	Del_16p13.3	0.349	1
FAM123B	HIST1H1T	0.351	1
SOX9	ALPK2	0.351	1
MLH1	GGT1	0.351	1
GGT1	PTCH1	0.351	1
C11orf30	Del_3p14.2	0.351	1
VCX2	Amp_13q12.2	0.351	1
Amp_17q12	Del_12p13.1	0.351	1
Amp_20q11.21	Del_10q25.2	0.351	1
APC	TOP2B	0.352	1
APC	Del_6p25.3	0.352	1
ATM	IDH1	0.352	1
CTNNB1	Del_8p22	0.352	1
7q-Amp	4q-Del	0.352	1
7q-Amp	Del_1p13.2	0.352	1
CRIPAK	Del_10q25.2	0.353	1
ZFP36L2	ST3GAL6	0.353	1
B2M	ST3GAL6	0.353	1
BCOR	CTNNB1	0.353	1
EGR1	GMPS	0.353	1
RPTN	VCX2	0.353	1
ST3GAL6	HLA-A	0.353	1
PLEKHF2	GMPS	0.353	1
VCX2	HLA-A	0.353	1
ATM	Amp_8q24.21	0.353	1
8p-Amp	Del_1p36.11	0.353	1
15q-Del	Amp_6p21.1	0.353	1
Amp_16p11.2	Del_12p13.1	0.353	1
Amp_20q11.21	Del_3q26.31	0.353	1
CRIPAK	WNT1	0.354	1
CRIPAK	ALG12	0.354	1
THOC7	Del_4p16.1	0.354	1
RBBP7	Del_10q25.2	0.354	1
7p-Amp	Del_10q25.2	0.354	1
20q-Amp	Del_8q11.1	0.355	1
Del_6q26	Del_14q11.2	0.355	1
Del_14q11.2	Del_19p13.3	0.355	1
APC	Del_21q11.2	0.356	1
CHUK	BCORL1	0.356	1
BCL9	SMAD4	0.356	1
ATM	Amp_12p13.33	0.356	1
RNF43	12q-Amp	0.357	1
NR1H3	CREBBP	0.357	1
ASXL1	ZNF486	0.357	1
PCBP1	CREBBP	0.357	1
16q-Amp	Del_15q22.33	0.357	1
CDH1	ALG12	0.358	1
BCOR	Del_3q26.31	0.358	1
CHUK	PRPS1	0.358	1
C11orf30	PTGDR	0.358	1
DIP2B	Del_3q26.31	0.358	1
VCX2	Del_18q21.2	0.358	1
TOP2B	Amp_5p12	0.358	1
LARP4B	NEXN	0.358	1
LARP4B	Del_3q26.31	0.358	1
22q-Del	Amp_16p11.2	0.358	1
Amp_6p21.1	Del_7q31.1	0.358	1
ARID1A	Del_4q35.1	0.359	1
OR4D10	IQCD	0.359	1
RHOA	DDX26B	0.359	1
EGR1	PIK3R1	0.359	1
CTNNB1	Del_2q22.1	0.359	1
8q-Amp	Del_10q23.31	0.359	1
Amp_1q31.1	Del_8p22	0.359	1
Amp_13q22.1	Del_16p13.3	0.359	1
Amp_20p11.21	Del_8q11.1	0.359	1
Del_15q22.33	Del_16q23.1	0.359	1
FAM123B	Amp_12p13.33	0.36	1
MLH1	Amp_12p13.33	0.36	1
ASXL1	Del_5q22.2	0.36	1
NLRC4	2p-Amp	0.36	1
NLRC4	6p-Amp	0.36	1
BCORL1	2p-Amp	0.36	1
BCORL1	6p-Amp	0.36	1
BCORL1	Amp_15q26.1	0.36	1
ATM	Amp_1q31.1	0.36	1
Amp_10q22.3	Del_5q12.1	0.36	1
TP53	FBXW7	0.361	1
MAPK6	RSPH3	0.361	1
THOC7	FKBP9	0.361	1
THOC7	ALDH1A3	0.361	1
GRB2	SLC26A8	0.361	1
RSPH3	SLC26A8	0.361	1
RSPH3	ALDH1A3	0.361	1
VCX2	20q-Amp	0.361	1
C2orf29	Del_2q22.1	0.361	1
FKBP9	Del_2q22.1	0.361	1
21q-Del	Amp_1q31.1	0.361	1
21q-Del	Amp_17q24.1	0.361	1
Amp_8q24.21	Del_1p36.11	0.361	1
Del_2q22.1	Del_16p13.3	0.361	1
GGT1	ZBTB20	0.362	1
GGT1	IDH1	0.362	1
GGT1	17q-Amp	0.362	1
STARD3NL	Amp_10q22.3	0.362	1
TPRKB	ZBTB20	0.362	1
TPRKB	MAP4K3	0.362	1
MVK	FYN	0.362	1
MVK	BIRC3	0.362	1
P2RY13	PRRG1	0.362	1
PRRG1	PCBP1	0.362	1
PRRG1	DCLK2	0.362	1
PRRG1	BIRC3	0.362	1
HIST1H1T	IDH1	0.362	1
APC	7q-Amp	0.363	1
NF2	Del_7q31.1	0.363	1
MGA	Del_6p25.3	0.363	1
PRPS1	Del_4q35.1	0.363	1
2p-Amp	Del_18p11.31	0.363	1
2q-Amp	Del_18p11.31	0.363	1
Amp_11p15.5	Del_4q35.1	0.363	1
Amp_20q13.12	Del_10q25.2	0.363	1
Del_5q21.2	Del_14q11.2	0.363	1
BCOR	ALG12	0.364	1
SELPLG	CDK12	0.364	1
MAPK6	CDK12	0.364	1
ALG12	DIP2B	0.364	1
DIP2B	C14orf184	0.364	1
C2orf29	CDK12	0.364	1
C14orf184	LARP4B	0.364	1
ALDH1A3	CDK12	0.364	1
12q-Amp	Amp_13q12.2	0.364	1
Amp_11p15.5	Del_10q25.2	0.364	1
APC	FAM123B	0.365	1
APC	MLH1	0.365	1
CRIPAK	MAP4K3	0.365	1
TP53	PLEKHF2	0.365	1
SELPLG	RB1	0.365	1
PTCH1	Del_16p13.3	0.365	1
4p-Del	Del_12p13.1	0.365	1
TXNDC2	Amp_8p11.23	0.366	1
STARD3NL	Del_22q13.32	0.366	1
C11orf30	SMAD4	0.366	1
DIP2B	Del_21q21.1	0.366	1
KDM6A	Del_1p33	0.366	1
20p-Amp	Del_15q21.1	0.366	1
Amp_8q24.21	Amp_10q22.3	0.366	1
Amp_20p12.1	Del_14q11.2	0.366	1
FAM123B	Del_15q21.1	0.367	1
ERBB2	HLA-A	0.367	1
ERBB2	GMPS	0.367	1
8q-Amp	4p-Del	0.367	1
Amp_1q31.1	Del_5q23.3	0.367	1
Amp_1q31.1	Del_8q11.1	0.367	1
Amp_17q24.1	Del_8q11.1	0.367	1
ATXN3L	7p-Amp	0.369	1
ZNF486	Amp_8p11.23	0.369	1
SOX9	DCLK2	0.37	1
ACVR1B	Del_12p13.1	0.37	1
SMAD2	KDM6A	0.37	1
SELPLG	Del_15q15.2	0.37	1
PLEKHF2	RLIM	0.37	1
RLIM	VCX2	0.37	1
VCX2	1p-Del	0.37	1
BIRC3	Del_5q23.3	0.37	1
TXNDC2	PRPS1	0.371	1
TXNDC2	PTGDR	0.371	1
TXNDC2	Del_7q31.1	0.371	1
MVK	Amp_8p11.21	0.371	1
C11orf30	PTEN	0.371	1
SMAD4	Amp_1q31.1	0.371	1
TOP2B	PRPS1	0.371	1
SETD2	Amp_12p13.33	0.371	1
PRPS1	Del_6p25.3	0.371	1
18q-Del	Amp_2q33.1	0.371	1
Amp_8p11.21	Amp_10q22.3	0.371	1
Del_6p25.3	Del_7q31.1	0.371	1
ASXL1	Amp_11p15.5	0.372	1
ROS1	C2orf29	0.372	1
12p-Amp	Amp_17q12	0.372	1
20p-Amp	Del_17q24.3	0.372	1
Amp_13q12.2	Del_6q26	0.372	1
Amp_17q12	Del_1p13.2	0.372	1
Del_16q23.1	Del_22q13.32	0.372	1
APC	GMNN	0.373	1
APC	4p-Del	0.373	1
TP53	STARD3NL	0.373	1
TP53	GPATCH8	0.373	1
L1TD1	12q-Amp	0.373	1
CTNNB1	Del_8p23.2	0.373	1
Del_3q26.31	Del_10q21.1	0.373	1
WNT1	9p-Amp	0.374	1
PIK3R1	IDH1	0.374	1
C14orf184	9p-Amp	0.374	1
12q-Amp	Amp_13q22.1	0.374	1
9p-Amp	Amp_13q22.1	0.374	1
8p-Del	Del_3p14.2	0.374	1
CRIPAK	Amp_20p12.1	0.375	1
MLH1	7p-Amp	0.375	1
PRKDC	NR1H3	0.375	1
PRKDC	PCBP1	0.375	1
C14orf184	7q-Amp	0.375	1
SMAD2	HIST1H1T	0.376	1
FAM9A	NEXN	0.376	1
FAM9A	Amp_2q33.1	0.376	1
THOC7	ATXN3L	0.376	1
THOC7	L1TD1	0.376	1
THOC7	Del_3q26.31	0.376	1
ATXN3L	Del_2q22.1	0.376	1
BCL9	Del_6p25.3	0.376	1
GRB2	Amp_19q12	0.376	1
GRB2	Del_3q26.31	0.376	1
NLRC4	Del_6p25.3	0.376	1
RSPH3	Amp_2q33.1	0.376	1
RSPH3	Del_3q26.31	0.376	1
L1TD1	Del_2q22.1	0.376	1
BCORL1	Del_6p25.3	0.376	1
5q-Del	Del_2q22.1	0.376	1
Amp_2q33.1	Del_2q22.1	0.376	1
Amp_13q12.13	Del_3p14.2	0.376	1
Amp_19q12	Del_2q22.1	0.376	1
ZFP36L2	FMN2	0.377	1
ZFP36L2	IQCD	0.377	1
ZFP36L2	7q-Amp	0.377	1
B2M	ZNF486	0.377	1
FMN2	16p-Amp	0.377	1
RHOA	RBPJ	0.377	1
RPTN	IQCD	0.377	1
RPTN	IFT57	0.377	1
IQCD	HLA-A	0.377	1
RBPJ	ZNF486	0.377	1
HLA-A	ZNF486	0.377	1
GMPS	ZNF486	0.377	1
ZNF486	16p-Amp	0.377	1
7p-Amp	Del_6q26	0.377	1
7p-Amp	Del_19p13.3	0.377	1
TP53	RLIM	0.378	1
SMAD2	8p-Amp	0.378	1
ZNF486	8p-Amp	0.378	1
13q-Amp	Amp_11p15.5	0.378	1
8p-Amp	Amp_13q12.2	0.378	1
8p-Amp	Del_12p13.1	0.378	1
FAM123B	Del_21q21.1	0.379	1
ALPK2	Amp_6p21.1	0.379	1
ASXL1	Amp_6p21.1	0.379	1
PIK3R1	Del_17q24.3	0.379	1
CREBBP	12p-Amp	0.379	1
TXNDC2	Amp_13q22.1	0.38	1
PIK3R1	Del_10q23.31	0.38	1
RB1	12p-Amp	0.38	1
Amp_13q22.1	Del_6q26	0.38	1
APC	Del_10q25.2	0.381	1
B2M	Del_1p33	0.381	1
BCOR	IDH1	0.381	1
FMN2	Del_5q22.2	0.381	1
OR4D10	MVK	0.381	1
ATXN3L	21q-Del	0.381	1
MAP4K3	Del_17q24.3	0.381	1
CDK12	4p-Del	0.381	1
17q-Amp	Del_17q24.3	0.381	1
1p-Del	Del_10q25.2	0.381	1
21q-Del	Del_3q26.31	0.381	1
FAM123B	RLIM	0.382	1
STARD3NL	NR1H3	0.382	1
STARD3NL	PCBP1	0.382	1
STARD3NL	DCLK2	0.382	1
STARD3NL	GPATCH8	0.382	1
STARD3NL	4q-Del	0.382	1
STARD3NL	Amp_11p15.5	0.382	1
P2RY13	FYN	0.382	1
P2RY13	BIRC3	0.382	1
PCBP1	DCLK2	0.382	1
PCBP1	FYN	0.382	1
DCLK2	12p-Amp	0.382	1
DCLK2	16q-Amp	0.382	1
BIRC3	16q-Amp	0.382	1
16q-Amp	4q-Del	0.382	1
2p-Amp	Del_17p12	0.382	1
2q-Amp	Del_17p12	0.382	1
Amp_15q26.1	Del_17p12	0.382	1
APC	Del_21q21.1	0.383	1
PRPS1	Amp_5p12	0.383	1
TP53	Del_6p25.3	0.384	1
SOX9	SLC12A6	0.384	1
CDH1	Del_5q22.2	0.384	1
WNT1	CDK12	0.384	1
HIST1H1T	15q-Del	0.384	1
Amp_12p13.33	Del_8p23.2	0.384	1
TXNDC2	Amp_12p13.33	0.385	1
12p-Amp	Amp_17q24.1	0.385	1
22q-Del	Del_16q23.1	0.385	1
4q-Del	Amp_1q31.1	0.385	1
Amp_1q31.1	Del_1p13.2	0.385	1
Amp_12p13.33	Del_19p13.3	0.385	1
FAM123B	Del_5q23.3	0.386	1
SELPLG	PLEKHF2	0.386	1
EGR1	ALDH1A3	0.386	1
NF1	7q-Amp	0.386	1
PLEKHF2	C2orf29	0.386	1
PLEKHF2	SLC26A8	0.386	1
PLEKHF2	FKBP9	0.386	1
VCX2	C2orf29	0.386	1
VCX2	FKBP9	0.386	1
APC	THOC7	0.387	1
APC	GRB2	0.387	1
CRIPAK	SMAD2	0.387	1
TP53	20p-Del	0.387	1
BCOR	8p-Del	0.387	1
EGR1	21q-Del	0.387	1
PLEKHF2	21q-Del	0.387	1
ROS1	Del_3p14.2	0.387	1
21q-Del	Amp_13q12.2	0.387	1
P2RY13	PTCH1	0.388	1
PTCH1	16q-Amp	0.388	1
GRB2	13q-Amp	0.388	1
SMAD4	7p-Amp	0.388	1
RB1	DCLK2	0.388	1
ATM	7p-Amp	0.388	1
GMNN	18q-Del	0.388	1
CTNNB1	9p-Amp	0.388	1
13q-Amp	Del_2q22.1	0.388	1
16p-Amp	15q-Del	0.388	1
APC	ZFP36L2	0.389	1
APC	RBPJ	0.389	1
APC	HLA-A	0.389	1
APC	Del_8q11.1	0.389	1
ATXN3L	CDK12	0.389	1
VCX2	Amp_20q11.21	0.389	1
RBPJ	Amp_8q24.21	0.389	1
PTEN	Amp_1q31.1	0.389	1
SETD2	GMNN	0.389	1
CDK12	Del_3q26.31	0.389	1
CTNNB1	Del_21q11.2	0.389	1
Amp_8q24.21	Del_8q11.1	0.389	1
CRIPAK	CREBBP	0.39	1
NF1	Amp_16p11.2	0.39	1
TPRKB	C11orf30	0.39	1
TPRKB	Amp_6p21.1	0.39	1
ALDH1A3	Amp_8p11.23	0.39	1
CTNNB1	Del_5q22.2	0.39	1
FAM9A	MAP4K3	0.391	1
FAM9A	IDH1	0.391	1
THOC7	ZBTB20	0.391	1
THOC7	MAP4K3	0.391	1
THOC7	IDH1	0.391	1
MGA	SMAD4	0.391	1
ZBTB20	RSPH3	0.391	1
PIK3R1	Del_4q35.1	0.391	1
RSPH3	17q-Amp	0.391	1
VCX2	Amp_13q12.13	0.391	1
MAP4K3	Del_2q22.1	0.391	1
PRPS1	8q-Amp	0.391	1
PTGDR	7p-Amp	0.391	1
8p-Del	Del_21q21.1	0.391	1
TXNDC2	SETD2	0.392	1
ACVR1B	C11orf30	0.392	1
BCOR	ERBB2	0.392	1
CHUK	KDM6A	0.392	1
ERBB2	DIP2B	0.392	1
HIST1H1T	Del_21q21.1	0.392	1
Amp_1q31.1	Del_17q24.3	0.392	1
Amp_6p21.1	Del_16q23.1	0.392	1
Amp_17q12	Del_5q12.1	0.392	1
Del_3p26.3	Del_16q23.1	0.392	1
Del_7q31.1	Del_21q11.2	0.392	1
MVK	ASXL1	0.393	1
ERBB2	ROS1	0.393	1
C14orf184	20p-Del	0.393	1
NEXN	22q-Del	0.393	1
8q-Amp	Amp_1q31.1	0.393	1
TXNDC2	13q-Amp	0.394	1
MGA	NR1H3	0.394	1
MGA	16q-Amp	0.394	1
IQCD	RLIM	0.394	1
ASXL1	Del_5q21.2	0.394	1
PLAGL2	Amp_8p11.21	0.394	1
RLIM	ZNF486	0.394	1
CREBBP	Amp_12p13.33	0.394	1
7q-Amp	Del_4p16.1	0.394	1
21q-Del	Amp_17q12	0.394	1
Amp_8p11.23	Amp_15q26.1	0.394	1
Amp_8p11.21	Del_2p12	0.394	1
Amp_12p13.33	Amp_17q12	0.394	1
TXNDC2	Amp_16p11.2	0.395	1
12q-Amp	Del_10q25.2	0.395	1
1p-Del	Amp_17q24.1	0.395	1
Amp_12p13.33	Amp_20q12	0.395	1
MLH1	SLC12A6	0.396	1
BCL9	PRPS1	0.396	1
BCL9	PTGDR	0.396	1
BCL9	Del_7q31.1	0.396	1
ALPK2	GMNN	0.396	1
ASXL1	GMNN	0.396	1
SLC12A6	PRPS1	0.396	1
VCX2	Del_4p16.1	0.397	1
MAP4K3	Del_10q21.1	0.397	1
IDH1	12q-Amp	0.397	1
12q-Amp	17q-Amp	0.397	1
FAM123B	FAM9A	0.398	1
FAM123B	GRB2	0.398	1
FAM123B	Del_2q22.1	0.398	1
ZFP36L2	Del_21q21.1	0.398	1
MLH1	GRB2	0.398	1
MLH1	RSPH3	0.398	1
IQCD	PIK3R1	0.398	1
8q-Amp	Del_3p14.2	0.398	1
Del_6p25.3	Del_21q21.1	0.398	1
SELPLG	FBXW7	0.399	1
RPTN	MVK	0.399	1
FBXW7	SLC26A8	0.399	1
MVK	Del_8q11.1	0.399	1
PRRG1	GMPS	0.399	1
PRRG1	Del_8q11.1	0.399	1
ROS1	Del_16q23.1	0.399	1
RBBP7	Amp_10q22.3	0.399	1
SLC12A6	12p-Amp	0.399	1
16p-Amp	Amp_10q22.3	0.399	1
Del_3p14.2	Del_10q25.2	0.399	1
Del_10q23.31	Del_16q23.1	0.399	1
GGT1	Del_4q22.1	0.4	1
Amp_11p15.5	Del_8p22	0.4	1
ERBB2	Del_8p23.2	0.401	1
Amp_10q22.3	Del_15q15.2	0.401	1
Amp_20q11.21	Del_10q23.31	0.401	1
SOX9	OR4D10	0.402	1
SOX9	DDX26B	0.402	1
STARD3NL	DDX26B	0.402	1
OR4D10	P2RY13	0.402	1
OR4D10	NR1H3	0.402	1
OR4D10	16q-Amp	0.402	1
ATXN3L	PLEKHF2	0.402	1
PLEKHF2	L1TD1	0.402	1
PLEKHF2	NEXN	0.402	1
VCX2	5q-Del	0.402	1
VCX2	Amp_2q33.1	0.402	1
VCX2	Amp_19q12	0.402	1
DDX26B	FYN	0.402	1
DDX26B	BIRC3	0.402	1
Amp_8q24.21	Del_4q35.1	0.402	1
CRIPAK	Del_22q13.32	0.403	1
RNF43	GMNN	0.403	1
TXNDC2	HIST1H1T	0.403	1
TPRKB	TOP2B	0.403	1
TPRKB	Del_6p25.3	0.403	1
ERBB2	Del_5q12.1	0.403	1
TOP2B	HIST1H1T	0.403	1
SLC12A6	Del_1p36.11	0.403	1
HIST1H1T	Del_6p25.3	0.403	1
Amp_6p21.1	Del_17p12	0.403	1
BCOR	SMAD2	0.404	1
SMAD2	Del_17q24.3	0.404	1
DIP2B	6p-Amp	0.404	1
PIK3R1	12q-Amp	0.404	1
RLIM	Del_5q22.2	0.404	1
MPHOSPH10	Del_5q22.2	0.404	1
SMAD4	Del_15q11.2	0.404	1
20p-Del	Amp_2q33.1	0.404	1
4p-Del	Amp_10q22.3	0.404	1
5q-Del	Amp_20p11.21	0.404	1
FAM123B	FBXW7	0.405	1
SMAD2	FAM9A	0.405	1
ATXN3L	ROS1	0.405	1
RSPH3	Del_12p13.1	0.405	1
DCLK2	Del_3p14.2	0.405	1
Del_1p36.11	Del_3p14.2	0.405	1
FBXW7	VCX2	0.406	1
2p-Amp	18p-Del	0.406	1
2q-Amp	18p-Del	0.406	1
Amp_15q26.1	Amp_20p11.21	0.406	1
ZFP36L2	Del_10q23.31	0.407	1
BCOR	NF2	0.407	1
RPTN	Del_10q23.31	0.407	1
DIP2B	Del_4q35.1	0.407	1
RBBP7	Del_10q23.31	0.407	1
17p-Del	Amp_12p13.33	0.407	1
Amp_17q12	Del_6q26	0.407	1
SELPLG	BMPR2	0.408	1
PRPS1	Del_8p23.2	0.408	1
13q-Amp	Del_16p13.3	0.408	1
16p-Amp	Del_4q22.1	0.408	1
Del_10q25.2	Del_16p13.3	0.408	1
ATM	12q-Amp	0.409	1
8p-Amp	Amp_11p15.5	0.409	1
PRKDC	12p-Amp	0.41	1
ATXN3L	Del_15q15.2	0.41	1
DIP2B	Del_1p33	0.41	1
GMNN	8p-Amp	0.41	1
Amp_2q33.1	Del_15q15.2	0.41	1
Amp_10q22.3	Del_15q21.1	0.41	1
SELPLG	RHOA	0.411	1
MAPK6	IFT57	0.411	1
RHOA	FKBP9	0.411	1
RHOA	ALDH1A3	0.411	1
IQCD	SLC26A8	0.411	1
IFT57	Del_16p13.3	0.411	1
C2orf29	ZNF486	0.411	1
8q-Amp	8p-Del	0.411	1
Amp_20q12	Del_10q25.2	0.411	1
ALG12	BMPR2	0.412	1
ALG12	Del_10q25.2	0.412	1
PTCH1	5q-Del	0.412	1
C14orf184	BMPR2	0.412	1
Amp_6p21.1	Del_15q22.33	0.412	1
TXNDC2	ACVR1B	0.413	1
12q-Amp	Amp_17q24.1	0.413	1
9p-Amp	Amp_1q31.1	0.413	1
Amp_15q26.1	Del_15q11.2	0.413	1
Amp_17q12	Del_3p14.2	0.413	1
Amp_20p12.1	Del_1p36.11	0.413	1
ZFP36L2	7p-Amp	0.414	1
CHUK	7q-Amp	0.414	1
20q-Amp	Del_7q31.1	0.414	1
7q-Amp	Del_3p26.3	0.414	1
SOX9	PLAGL2	0.415	1
CTNNB1	Del_4q35.1	0.415	1
2q-Amp	9p-Amp	0.415	1
8p-Amp	Amp_10q22.3	0.415	1
14q-Del	Amp_8p11.23	0.415	1
Del_2p12	Del_5q23.3	0.415	1
GGT1	Del_4q35.1	0.416	1
NF2	TPRKB	0.416	1
THOC7	Del_18p11.31	0.416	1
BCL9	BCORL1	0.416	1
RSPH3	Del_5q22.2	0.416	1
FAM123B	SELPLG	0.417	1
FAM123B	Del_16p13.3	0.417	1
MLH1	ALDH1A3	0.417	1
MVK	MPHOSPH10	0.417	1
PRRG1	MPHOSPH10	0.417	1
MPHOSPH10	Amp_10q22.3	0.417	1
NF1	Del_16p13.3	0.418	1
NLRC4	8p-Del	0.418	1
CDK12	Del_15q15.2	0.418	1
Amp_12p13.33	Amp_20q11.21	0.418	1
APC	ACVR1B	0.419	1
ARID1A	SELPLG	0.419	1
TP53	CREBBP	0.419	1
SELPLG	Del_15q11.2	0.419	1
FAM9A	CHUK	0.419	1
THOC7	CHUK	0.419	1
CHUK	GRB2	0.419	1
GRB2	Amp_6p21.1	0.419	1
RSPH3	Amp_6p21.1	0.419	1
SMAD4	4p-Del	0.419	1
PRPS1	Del_16q23.1	0.419	1
PTGDR	KDM6A	0.419	1
PTGDR	Del_16q23.1	0.419	1
Amp_6p21.1	Del_2q22.1	0.419	1
ZBTB20	8q-Amp	0.42	1
SMAD4	TOP2B	0.42	1
SMAD4	Del_6p25.3	0.42	1
IDH1	7p-Amp	0.42	1
RNF43	TXNDC2	0.421	1
ZFP36L2	P2RY13	0.421	1
ZFP36L2	DCLK2	0.421	1
ZFP36L2	FYN	0.421	1
B2M	STARD3NL	0.421	1
B2M	PCBP1	0.421	1
B2M	DCLK2	0.421	1
TXNDC2	4p-Del	0.421	1
SMAD2	12q-Amp	0.421	1
STARD3NL	RBPJ	0.421	1
STARD3NL	Del_8q11.1	0.421	1
RPTN	FYN	0.421	1
RPTN	BIRC3	0.421	1
THOC7	SMAD4	0.421	1
ATXN3L	Del_14q11.2	0.421	1
ATXN3L	Del_15q21.1	0.421	1
NR1H3	RBPJ	0.421	1
NR1H3	HLA-A	0.421	1
PCBP1	RBPJ	0.421	1
PCBP1	GMPS	0.421	1
RBPJ	DCLK2	0.421	1
DCLK2	16p-Amp	0.421	1
NEXN	Del_14q11.2	0.421	1
BIRC3	16p-Amp	0.421	1
CTNNB1	4p-Del	0.421	1
8p-Amp	20p-Del	0.421	1
Amp_2q33.1	Del_15q21.1	0.421	1
Amp_20p11.21	Del_17q24.3	0.421	1
Del_10q21.1	Del_12p13.1	0.421	1
OR4D10	DDX26B	0.422	1
C14orf184	8p-Del	0.422	1
GMNN	Del_18q12.2	0.422	1
CTNNB1	Del_1p13.2	0.422	1
PLAGL2	12p-Amp	0.423	1
PIK3R1	GMNN	0.423	1
C2orf29	Amp_17q24.1	0.423	1
13q-Amp	Del_10q25.2	0.423	1
7q-Amp	1p-Del	0.423	1
FMN2	FAM9A	0.424	1
FMN2	GRB2	0.424	1
CHUK	Del_22q13.32	0.424	1
PIK3R1	Del_5q23.3	0.424	1
VCX2	Amp_20q12	0.424	1
CDK12	Del_21q21.1	0.424	1
SELPLG	Amp_20q11.21	0.425	1
DIP2B	21q-Del	0.425	1
MPHOSPH10	Amp_12p13.33	0.425	1
20p-Amp	21q-Del	0.425	1
15q-Del	1p-Del	0.425	1
APC	8q-Amp	0.426	1
CDH1	2p-Amp	0.426	1
CDH1	2q-Amp	0.426	1
20p-Amp	Del_1p13.2	0.426	1
ATXN3L	Amp_13q12.2	0.427	1
ATXN3L	IFT57	0.428	1
IQCD	5q-Del	0.428	1
IQCD	Del_3q26.31	0.428	1
IQCD	Del_5q21.2	0.428	1
ALPK2	PCBP1	0.428	1
ASXL1	DCLK2	0.428	1
IFT57	NEXN	0.428	1
IFT57	Amp_2q33.1	0.428	1
FYN	Amp_17q12	0.428	1
ZNF486	5q-Del	0.428	1
ZNF486	Amp_2q33.1	0.428	1
ZNF486	Del_3q26.31	0.428	1
14q-Del	Del_10q25.2	0.428	1
ZFP36L2	Del_4q35.1	0.429	1
GGT1	BCORL1	0.429	1
TPRKB	BCL9	0.429	1
TPRKB	SLC12A6	0.429	1
NLRC4	HIST1H1T	0.429	1
BCORL1	HIST1H1T	0.429	1
IDH1	20p-Del	0.429	1
17q-Amp	20p-Del	0.429	1
8p-Del	Amp_17q24.1	0.429	1
Amp_17q12	Del_4q22.1	0.429	1
ARID1A	Del_5q21.2	0.43	1
CHUK	Amp_20p12.1	0.43	1
C14orf184	Del_1p33	0.43	1
BCORL1	Del_3p14.2	0.43	1
CREBBP	Del_3p14.2	0.43	1
Amp_13q12.13	Del_6q26	0.43	1
Amp_20q13.12	Del_10q23.31	0.43	1
Del_3p14.2	Del_15q22.33	0.43	1
CRIPAK	TXNDC2	0.431	1
CRIPAK	PRPS1	0.431	1
CRIPAK	PTGDR	0.431	1
CDK12	Del_15q21.1	0.431	1
Del_2p12	Del_5q12.1	0.431	1
SOX9	KDM6A	0.432	1
SOX9	Del_16q23.1	0.432	1
18q-Del	Amp_6p21.1	0.432	1
Amp_1q31.1	Amp_20q11.21	0.432	1
Del_5q23.3	Del_16q23.1	0.432	1
SOX9	ZFP36L2	0.433	1
SOX9	RPTN	0.433	1
SOX9	GMPS	0.433	1
TXNDC2	FAM9A	0.433	1
TXNDC2	THOC7	0.433	1
TXNDC2	GRB2	0.433	1
SMAD2	PLEKHF2	0.433	1
FAM9A	TOP2B	0.433	1
RPTN	Del_5q23.3	0.433	1
RSPH3	TOP2B	0.433	1
SMAD4	Del_8p22	0.433	1
RB1	Del_5q21.2	0.433	1
16p-Amp	Del_5q23.3	0.433	1
15q-Del	Del_2q22.1	0.433	1
Del_5q23.3	Del_8q11.1	0.433	1
APC	DDX26B	0.434	1
MLH1	MGA	0.434	1
FBXW7	DDX26B	0.434	1
ALPK2	Amp_5p12	0.434	1
DIP2B	Del_22q13.32	0.434	1
9p-Amp	Del_17p12	0.434	1
Amp_5p12	Amp_17q12	0.434	1
Amp_5p12	Del_16q23.1	0.434	1
SELPLG	PRRG1	0.435	1
SELPLG	Amp_10q22.3	0.435	1
MVK	C2orf29	0.435	1
ERBB2	CDK12	0.435	1
PRRG1	C2orf29	0.435	1
C2orf29	Amp_10q22.3	0.435	1
2p-Amp	20p-Del	0.435	1
2q-Amp	20p-Del	0.435	1
20p-Del	Amp_15q26.1	0.435	1
Amp_10q22.3	Del_16p13.3	0.435	1
Amp_19q12	Del_10q25.2	0.435	1
Del_3q26.31	Del_10q25.2	0.435	1
ZBTB20	SMAD4	0.436	1
SMAD4	MAP4K3	0.436	1
SMAD4	IDH1	0.436	1
7p-Amp	21q-Del	0.436	1
17p-Del	Amp_6p21.1	0.436	1
Amp_8p11.23	Del_4q35.1	0.436	1
SELPLG	Del_1p33	0.437	1
NF2	Del_10q21.1	0.437	1
PTCH1	8q-Amp	0.437	1
CDK12	Del_12p13.1	0.437	1
8q-Amp	Del_1p36.11	0.437	1
8q-Amp	Del_4q22.1	0.437	1
1p-Del	Del_10q23.31	0.437	1
FAM123B	Del_15q11.2	0.438	1
20q-Amp	Del_10q25.2	0.438	1
Amp_10q22.3	Del_8p22	0.438	1
CDH1	SLC26A8	0.439	1
GGT1	PRKDC	0.439	1
PRKDC	HIST1H1T	0.439	1
THOC7	Del_17p12	0.439	1
FBXW7	Amp_16p11.2	0.439	1
RBPJ	CREBBP	0.439	1
16p-Amp	Del_15q22.33	0.439	1
Amp_8p11.23	Del_14q11.2	0.439	1
Amp_20q11.21	Del_7q31.1	0.439	1
RNF43	PCBP1	0.44	1
STARD3NL	RLIM	0.44	1
STARD3NL	1p-Del	0.44	1
STARD3NL	4p-Del	0.44	1
MGA	Amp_16p11.2	0.44	1
DIP2B	22q-Del	0.44	1
PCBP1	RLIM	0.44	1
RLIM	BIRC3	0.44	1
MPHOSPH10	BIRC3	0.44	1
DCLK2	4p-Del	0.44	1
BIRC3	4p-Del	0.44	1
CTNNB1	Del_15q22.33	0.44	1
GGT1	Amp_16p11.2	0.441	1
APC	HIST1H1T	0.442	1
BCOR	PTGDR	0.442	1
OR4D10	16p-Amp	0.442	1
DIP2B	Del_7q31.1	0.442	1
DDX26B	GMPS	0.442	1
LARP4B	Del_7q31.1	0.442	1
8p-Del	Del_5q22.2	0.442	1
Amp_20q13.12	Del_3p14.2	0.442	1
Del_7q31.1	Del_17q24.3	0.442	1
GMNN	21q-Del	0.443	1
Amp_5p12	Del_4q22.1	0.443	1
TP53	HLA-A	0.444	1
TP53	16p-Amp	0.444	1
TP53	Del_8q11.1	0.444	1
FAM123B	EGR1	0.444	1
FAM123B	PLEKHF2	0.444	1
MLH1	VCX2	0.444	1
MLH1	Del_8p23.2	0.444	1
RHOA	MAP4K3	0.444	1
RHOA	IDH1	0.444	1
ZBTB20	IFT57	0.444	1
IQCD	17q-Amp	0.444	1
C11orf30	12q-Amp	0.444	1
IFT57	IDH1	0.444	1
CDK12	Amp_8p11.23	0.444	1
IDH1	ZNF486	0.444	1
Del_5q21.2	Del_12p13.1	0.444	1
TP53	6p-Amp	0.445	1
TP53	Amp_10q22.3	0.445	1
TP53	Amp_15q26.1	0.445	1
PTGDR	13q-Amp	0.445	1
18p-Del	Amp_6p21.1	0.445	1
Amp_6p21.1	Amp_20p11.21	0.445	1
TP53	RSPH3	0.446	1
ZFP36L2	12p-Amp	0.446	1
ZFP36L2	Amp_11p15.5	0.446	1
TXNDC2	CREBBP	0.446	1
SELPLG	Del_18p11.31	0.446	1
RPTN	Amp_11p15.5	0.446	1
RBPJ	12p-Amp	0.446	1
RBBP7	Amp_11p15.5	0.446	1
RBBP7	Del_1p13.2	0.446	1
17p-Del	Amp_11p15.5	0.446	1
Del_16p13.3	Del_18p11.31	0.446	1
FAM9A	Amp_5p12	0.447	1
PIK3R1	12p-Amp	0.447	1
HIST1H1T	Del_21q11.2	0.447	1
4q-Del	Amp_8p11.21	0.447	1
Amp_6p21.1	Del_21q11.2	0.447	1
ZFP36L2	8p-Del	0.448	1
EGR1	Del_3p26.3	0.448	1
RPTN	8p-Del	0.448	1
VCX2	Amp_6p21.1	0.448	1
VCX2	Del_3p26.3	0.448	1
C14orf184	Del_10q23.31	0.448	1
CTNNB1	21q-Del	0.448	1
Del_1p13.2	Del_10q23.31	0.448	1
ZFP36L2	Del_22q13.32	0.449	1
TXNDC2	BCOR	0.449	1
TXNDC2	DIP2B	0.449	1
ACVR1B	12p-Amp	0.449	1
BCOR	Del_6p25.3	0.449	1
BCOR	Del_19p13.3	0.449	1
THOC7	Amp_8p11.21	0.449	1
NF1	Del_6p25.3	0.449	1
GRB2	Amp_8p11.21	0.449	1
LARP4B	Del_6p25.3	0.449	1
SLC12A6	Amp_12p13.33	0.449	1
16p-Amp	Del_22q13.32	0.449	1
ARID1A	12q-Amp	0.45	1
ATXN3L	ERBB2	0.45	1
ALG12	PTCH1	0.45	1
9p-Amp	Del_15q11.2	0.45	1
Amp_1q31.1	Del_3q26.31	0.45	1
Del_2q22.1	Del_4q22.1	0.45	1
FMN2	MAPK6	0.451	1
STARD3NL	8p-Amp	0.451	1
P2RY13	8p-Amp	0.451	1
NR1H3	8p-Amp	0.451	1
RB1	Amp_12p13.33	0.451	1
DCLK2	8p-Amp	0.451	1
GPATCH8	8p-Amp	0.451	1
12q-Amp	21q-Del	0.451	1
9p-Amp	Del_5q21.2	0.451	1
9p-Amp	Del_15q22.33	0.451	1
Amp_8p11.23	Del_3p14.2	0.451	1
FAM123B	Amp_19q12	0.452	1
MLH1	L1TD1	0.452	1
MLH1	Amp_19q12	0.452	1
ATXN3L	Amp_10q22.3	0.452	1
MVK	NEXN	0.452	1
NEXN	Amp_10q22.3	0.452	1
20p-Amp	Del_1p33	0.452	1
CRIPAK	Amp_5p12	0.453	1
PRPS1	12q-Amp	0.453	1
PTGDR	Del_10q21.1	0.453	1
Amp_12p13.33	Del_21q11.2	0.453	1
Amp_20p12.1	Del_21q11.2	0.453	1
ASXL1	PLAGL2	0.454	1
HIST1H1T	Del_16q23.1	0.454	1
7q-Amp	Del_19p13.3	0.454	1
ACVR1B	BCORL1	0.455	1
FBXW7	Del_3q26.31	0.455	1
BMPR2	6p-Amp	0.455	1
BCORL1	KDM6A	0.455	1
BCORL1	Del_16q23.1	0.455	1
SLC12A6	KDM6A	0.455	1
SLC12A6	Del_16q23.1	0.455	1
PRPS1	Amp_20p12.1	0.455	1
PTGDR	Amp_20p12.1	0.455	1
HIST1H1T	14q-Del	0.455	1
2q-Amp	Del_10q25.2	0.455	1
CRIPAK	SOX9	0.456	1
CRIPAK	Del_5q23.3	0.456	1
FAM123B	KDM6A	0.456	1
THOC7	NF1	0.456	1
PRPS1	Amp_8p11.23	0.456	1
PRPS1	Del_8p22	0.456	1
PTGDR	Amp_8p11.23	0.456	1
Del_7q31.1	Del_8p22	0.456	1
FAM123B	Amp_1q31.1	0.457	1
MLH1	Del_8p22	0.457	1
ERBB2	ASXL1	0.457	1
SMAD4	Del_16q23.1	0.457	1
20q-Amp	Del_2q22.1	0.457	1
FAM123B	Del_3p14.2	0.458	1
ZFP36L2	Del_5q12.1	0.458	1
MLH1	Del_15q22.33	0.458	1
STARD3NL	SELPLG	0.458	1
STARD3NL	MAPK6	0.458	1
SELPLG	PCBP1	0.458	1
SELPLG	BIRC3	0.458	1
SELPLG	16q-Amp	0.458	1
MAPK6	NR1H3	0.458	1
MAPK6	DCLK2	0.458	1
MAPK6	FYN	0.458	1
RPTN	MGA	0.458	1
RPTN	Del_5q12.1	0.458	1
NR1H3	SLC26A8	0.458	1
PCBP1	C2orf29	0.458	1
PCBP1	SLC26A8	0.458	1
PCBP1	FKBP9	0.458	1
PCBP1	ALDH1A3	0.458	1
PCBP1	20p-Amp	0.458	1
ALDH1A3	BIRC3	0.458	1
16p-Amp	Del_5q12.1	0.458	1
16q-Amp	Del_16p13.3	0.458	1
8p-Del	Amp_16p11.2	0.458	1
Amp_8p11.21	Del_3q26.31	0.458	1
ZFP36L2	PRKDC	0.459	1
SMAD2	IQCD	0.459	1
SMAD2	IFT57	0.459	1
PLAGL2	8q-Amp	0.459	1
RB1	IDH1	0.459	1
7p-Amp	Del_2p12	0.459	1
17p-Del	Amp_17q24.1	0.459	1
THOC7	BCORL1	0.46	1
SLC12A6	Del_2q22.1	0.46	1
CDH1	Amp_10q22.3	0.461	1
CHUK	CDK12	0.461	1
DIP2B	Del_21q11.2	0.461	1
TXNDC2	ST3GAL6	0.462	1
EGR1	Del_6p25.3	0.462	1
PLEKHF2	TOP2B	0.462	1
PLEKHF2	Del_19p13.3	0.462	1
VCX2	TOP2B	0.462	1
SETD2	Del_1p33	0.462	1
Amp_2q33.1	Del_15q11.2	0.462	1
Amp_16p11.2	Del_14q11.2	0.462	1
Del_3q26.31	Del_15q11.2	0.462	1
ZFP36L2	B2M	0.463	1
ZFP36L2	RPTN	0.463	1
ZFP36L2	RBBP7	0.463	1
ZFP36L2	Del_8q11.1	0.463	1
RPTN	HLA-A	0.463	1
RPTN	GMPS	0.463	1
RLIM	Del_5q23.3	0.463	1
C2orf29	15q-Del	0.463	1
SLC26A8	Amp_12p13.33	0.463	1
8p-Amp	Amp_5p12	0.463	1
15q-Del	Del_16p13.3	0.463	1
Amp_17q12	Del_4q35.1	0.463	1
CDH1	Del_5q21.2	0.464	1
ATXN3L	Del_1p33	0.464	1
L1TD1	Del_1p33	0.464	1
CDK12	PRPS1	0.464	1
CDK12	Del_7q31.1	0.464	1
20q-Amp	Del_3p14.2	0.464	1
5q-Del	Amp_20p12.1	0.464	1
SOX9	WNT1	0.465	1
NF2	Del_10q23.31	0.465	1
MGA	Del_16q23.1	0.465	1
12p-Amp	8p-Del	0.465	1
6p-Amp	Amp_17q24.1	0.465	1
21q-Del	Amp_20p12.1	0.465	1
Amp_20q12	Del_3p14.2	0.465	1
APC	IDH1	0.466	1
APC	17q-Amp	0.466	1
CRIPAK	GGT1	0.466	1
CRIPAK	TPRKB	0.466	1
STARD3NL	Amp_8p11.23	0.466	1
P2RY13	Amp_8p11.23	0.466	1
GPATCH8	Amp_8p11.23	0.466	1
TXNDC2	9p-Amp	0.467	1
NF2	GRB2	0.467	1
NF2	RSPH3	0.467	1
NF2	Del_2q22.1	0.467	1
20p-Del	Del_4q22.1	0.467	1
THOC7	18p-Del	0.468	1
MVK	8q-Amp	0.468	1
MVK	21q-Del	0.468	1
PRRG1	8q-Amp	0.468	1
PRRG1	Del_5q21.2	0.468	1
8q-Amp	Amp_10q22.3	0.468	1
PIK3R1	7p-Amp	0.469	1
GMNN	Del_18q22.1	0.469	1
CTNNB1	Del_21q21.1	0.469	1
17q-Amp	Amp_10q22.3	0.469	1
8p-Amp	Del_10q25.2	0.469	1
SELPLG	Amp_20q12	0.47	1
ASXL1	8q-Amp	0.47	1
CTNNB1	1p-Del	0.47	1
7p-Amp	Del_1p13.2	0.47	1
8q-Amp	Del_12p13.1	0.47	1
Amp_13q12.2	Del_2p12	0.47	1
FAM123B	RB1	0.471	1
ZFP36L2	Del_3p14.2	0.471	1
B2M	Del_3p14.2	0.471	1
BCOR	Amp_5p12	0.471	1
RPTN	Del_3p14.2	0.471	1
ZBTB20	Amp_8p11.23	0.471	1
HLA-A	Del_3p14.2	0.471	1
BCORL1	8q-Amp	0.471	1
MAP4K3	Amp_8p11.23	0.471	1
IDH1	Amp_8p11.23	0.471	1
Amp_8q24.21	Del_10q25.2	0.471	1
Amp_20q12	Del_7q31.1	0.471	1
RHOA	CTNNB1	0.473	1
THOC7	Amp_16p11.2	0.473	1
IQCD	CTNNB1	0.473	1
PCBP1	PIK3R1	0.473	1
ZNF486	CTNNB1	0.473	1
Amp_16p11.2	Del_2q22.1	0.473	1
CRIPAK	NLRC4	0.474	1
OR4D10	4p-Del	0.474	1
ALG12	12p-Amp	0.474	1
ALG12	Amp_8q24.21	0.474	1
SMAD4	DCLK2	0.474	1
C14orf184	12p-Amp	0.474	1
Amp_6p21.1	Del_5q21.2	0.474	1
Amp_13q22.1	Del_2p12	0.474	1
RNF43	ERBB2	0.475	1
CDH1	12q-Amp	0.475	1
RHOA	CHUK	0.475	1
RHOA	C11orf30	0.475	1
RHOA	Del_3p26.3	0.475	1
THOC7	CREBBP	0.475	1
CHUK	IFT57	0.475	1
CHUK	ZNF486	0.475	1
ASXL1	Del_15q15.2	0.475	1
IFT57	Amp_6p21.1	0.475	1
SLC12A6	Del_4q22.1	0.475	1
Amp_15q26.1	Del_1p33	0.475	1
Del_2q22.1	Del_15q22.33	0.475	1
STARD3NL	ATXN3L	0.476	1
STARD3NL	NEXN	0.476	1
EGR1	PTCH1	0.476	1
EGR1	Amp_5p12	0.476	1
ATXN3L	P2RY13	0.476	1
ATXN3L	NR1H3	0.476	1
ZBTB20	ERBB2	0.476	1
P2RY13	NEXN	0.476	1
P2RY13	Del_3q26.31	0.476	1
ST3GAL6	Amp_5p12	0.476	1
NR1H3	NEXN	0.476	1
PCBP1	L1TD1	0.476	1
RLIM	12p-Amp	0.476	1
RLIM	Del_8p23.2	0.476	1
VCX2	RB1	0.476	1
DCLK2	Amp_2q33.1	0.476	1
DCLK2	Amp_19q12	0.476	1
GPATCH8	NEXN	0.476	1
GPATCH8	Amp_19q12	0.476	1
GPATCH8	Del_3q26.31	0.476	1
ATM	Amp_2q33.1	0.476	1
16q-Amp	5q-Del	0.476	1
17q-Amp	Amp_1q31.1	0.476	1
20p-Amp	1p-Del	0.476	1
Del_3q26.31	Del_5q22.2	0.476	1
Del_16p13.3	Del_17p12	0.476	1
TPRKB	DIP2B	0.477	1
DIP2B	HIST1H1T	0.477	1
CTNNB1	2p-Amp	0.477	1
CTNNB1	6p-Amp	0.477	1
CTNNB1	Amp_15q26.1	0.477	1
21q-Del	Amp_13q12.13	0.477	1
IDH1	Amp_20p11.21	0.478	1
20p-Del	Amp_6p21.1	0.478	1
20p-Del	Del_3p26.3	0.478	1
Amp_10q22.3	Del_4p16.1	0.478	1
18q-Del	Del_3p14.2	0.479	1
CDH1	8p-Amp	0.48	1
SELPLG	DDX26B	0.48	1
OR4D10	C2orf29	0.48	1
OR4D10	ALDH1A3	0.48	1
OR4D10	Del_16p13.3	0.48	1
ST3GAL6	Amp_12p13.33	0.48	1
PLEKHF2	Amp_12p13.33	0.48	1
VCX2	Amp_12p13.33	0.48	1
GMNN	Del_18q21.2	0.48	1
APC	P2RY13	0.481	1
FAM123B	GMNN	0.481	1
ATXN3L	Amp_13q12.13	0.481	1
MGA	Amp_8p11.21	0.481	1
ATM	16p-Amp	0.481	1
7q-Amp	Del_14q11.2	0.481	1
Amp_17q12	Del_15q22.33	0.481	1
CDH1	L1TD1	0.482	1
WNT1	MGA	0.482	1
RPTN	MPHOSPH10	0.482	1
MGA	ALG12	0.482	1
MGA	C14orf184	0.482	1
RLIM	RBBP7	0.482	1
RLIM	GMPS	0.482	1
RLIM	Del_8q11.1	0.482	1
ROS1	Del_10q21.1	0.482	1
MPHOSPH10	RBPJ	0.482	1
RBPJ	1p-Del	0.482	1
Amp_20p12.1	Del_6p25.3	0.482	1
ZFP36L2	SETD2	0.483	1
RSPH3	Del_22q13.32	0.483	1
KDM6A	Del_5q22.2	0.483	1
Amp_10q22.3	Del_17p12	0.483	1
PTCH1	12q-Amp	0.484	1
PTCH1	9p-Amp	0.484	1
PLAGL2	PIK3R1	0.484	1
Amp_1q31.1	Amp_20p11.21	0.484	1
SMAD2	PRRG1	0.485	1
OR4D10	Del_1p36.11	0.485	1
PRRG1	Del_12p13.1	0.485	1
Amp_10q22.3	Del_12p13.1	0.485	1
Amp_20p11.21	Del_5q23.3	0.485	1
Amp_20q11.21	Del_2q22.1	0.485	1
APC	Del_5q12.1	0.486	1
FAM123B	IDH1	0.486	1
ACVR1B	FAM9A	0.486	1
SMAD2	BMPR2	0.486	1
SMAD2	Del_10q25.2	0.486	1
FAM9A	KDM6A	0.486	1
FAM9A	Del_16q23.1	0.486	1
THOC7	Amp_13q12.2	0.486	1
THOC7	Del_16q23.1	0.486	1
GRB2	KDM6A	0.486	1
RSPH3	KDM6A	0.486	1
7q-Amp	Amp_10q22.3	0.486	1
Amp_1q31.1	Del_18q22.1	0.486	1
Amp_8q24.21	Del_6p25.3	0.486	1
Del_2q22.1	Del_16q23.1	0.486	1
Del_3p14.2	Del_10q23.31	0.486	1
FMN2	5q-Del	0.487	1
NF1	7p-Amp	0.487	1
Amp_13q12.13	Del_10q23.31	0.487	1
SMAD4	Del_15q21.1	0.488	1
RHOA	Amp_13q12.13	0.489	1
EGR1	Del_21q21.1	0.489	1
MGA	RLIM	0.489	1
TPRKB	12q-Amp	0.489	1
TPRKB	9p-Amp	0.489	1
PLEKHF2	Del_21q21.1	0.489	1
RLIM	Del_5q12.1	0.489	1
12p-Amp	Del_5q23.3	0.489	1
Amp_5p12	Del_10q21.1	0.489	1
TXNDC2	IQCD	0.49	1
EGR1	BCL9	0.49	1
EGR1	NLRC4	0.49	1
RPTN	Del_18p11.31	0.49	1
BCL9	PLEKHF2	0.49	1
BCL9	VCX2	0.49	1
VCX2	SLC12A6	0.49	1
SLC12A6	8p-Amp	0.49	1
ZNF486	Del_6p25.3	0.49	1
ZNF486	Del_19p13.3	0.49	1
CDH1	Del_7q31.1	0.491	1
ALG12	Del_3p14.2	0.491	1
SMAD4	Amp_8p11.21	0.491	1
C14orf184	Del_3p14.2	0.491	1
IDH1	Del_1p33	0.491	1
Amp_17q12	Del_14q11.2	0.491	1
APC	Del_4p16.1	0.492	1
GRB2	Amp_13q22.1	0.492	1
PIK3R1	Amp_5p12	0.492	1
PTEN	7p-Amp	0.492	1
SLC12A6	Del_17q24.3	0.492	1
SOX9	FKBP9	0.493	1
GGT1	Del_1p36.11	0.493	1
ZBTB20	PCBP1	0.493	1
ZBTB20	GPATCH8	0.493	1
ZBTB20	16q-Amp	0.493	1
P2RY13	IDH1	0.493	1
P2RY13	17q-Amp	0.493	1
NR1H3	MAP4K3	0.493	1
PCBP1	IDH1	0.493	1
RB1	Amp_1q31.1	0.493	1
DCLK2	IDH1	0.493	1
FYN	MAP4K3	0.493	1
16q-Amp	Del_15q11.2	0.493	1
Amp_19q12	Del_10q23.31	0.493	1
TP53	KDM6A	0.494	1
FAM123B	Del_15q15.2	0.494	1
MLH1	Del_15q15.2	0.494	1
FBXW7	Del_8q11.1	0.494	1
SMAD4	8p-Del	0.494	1
14q-Del	Del_6p25.3	0.494	1
ACVR1B	Del_16q23.1	0.495	1
ASXL1	GMPS	0.495	1
CTNNB1	Del_4q22.1	0.495	1
Amp_11p15.5	Del_21q21.1	0.495	1
Amp_17q12	Del_8q11.1	0.495	1
ERBB2	7q-Amp	0.496	1
BMPR2	PRPS1	0.496	1
12q-Amp	13q-Amp	0.496	1
20p-Del	Del_4q35.1	0.496	1
ACVR1B	SETD2	0.497	1
BCOR	12p-Amp	0.497	1
RLIM	8p-Del	0.497	1
VCX2	Del_4q22.1	0.497	1
LARP4B	12p-Amp	0.497	1
SETD2	Del_16q23.1	0.497	1
8p-Del	Del_5q21.2	0.497	1
8p-Del	Del_16q23.1	0.497	1
Del_14q11.2	Del_16q23.1	0.497	1
APC	Del_1p33	0.498	1
ARID1A	Del_3p14.2	0.498	1
OR4D10	Amp_19q12	0.498	1
OR4D10	Del_3q26.31	0.498	1
DDX26B	L1TD1	0.498	1
Amp_17q12	Del_22q13.32	0.498	1
FMN2	GMNN	0.499	1
ATXN3L	15q-Del	0.499	1
ALG12	SETD2	0.499	1
PIK3R1	22q-Del	0.499	1
C14orf184	SETD2	0.499	1
15q-Del	Amp_2q33.1	0.499	1
15q-Del	Del_3q26.31	0.499	1
18q-Del	Amp_15q26.1	0.499	1
5q-Del	Amp_12p13.33	0.499	1
GGT1	CDK12	0.5	1
CDK12	HIST1H1T	0.5	1
Amp_16p11.2	Del_17p12	0.5	1
ZFP36L2	MAPK6	0.501	1
ZFP36L2	SLC26A8	0.501	1
ZFP36L2	FKBP9	0.501	1
B2M	C2orf29	0.501	1
TXNDC2	20p-Del	0.501	1
SELPLG	RPTN	0.501	1
RPTN	C2orf29	0.501	1
ERBB2	Del_12p13.1	0.501	1
PRRG1	Amp_6p21.1	0.501	1
C2orf29	Del_8q11.1	0.501	1
RBPJ	ALDH1A3	0.501	1
ALDH1A3	Del_8q11.1	0.501	1
GMPS	Del_16p13.3	0.501	1
16p-Amp	Del_16p13.3	0.501	1
Amp_1q31.1	Del_12p13.1	0.501	1
Amp_10q22.3	Del_3p26.3	0.501	1
Amp_17q24.1	Del_12p13.1	0.501	1
APC	PTGDR	0.502	1
APC	Del_7q31.1	0.502	1
ZFP36L2	Amp_20p12.1	0.502	1
RLIM	MPHOSPH10	0.502	1
RLIM	1p-Del	0.502	1
MPHOSPH10	Del_3p14.2	0.502	1
GMPS	Amp_20p12.1	0.502	1
ARID1A	17q-Amp	0.503	1
PLEKHF2	Amp_16p11.2	0.503	1
ATM	6p-Amp	0.503	1
9p-Amp	Del_5q23.3	0.503	1
Amp_12p13.33	Del_5q12.1	0.503	1
TXNDC2	20p-Amp	0.504	1
SMAD2	RB1	0.504	1
RHOA	Amp_5p12	0.504	1
PTCH1	Del_12p13.1	0.504	1
RB1	Del_12p13.1	0.504	1
TOP2B	21q-Del	0.504	1
ZNF486	Amp_5p12	0.504	1
20p-Amp	Del_19p13.3	0.504	1
PLAGL2	21q-Del	0.505	1
PLAGL2	Del_5q21.2	0.505	1
HIST1H1T	Del_8p23.2	0.505	1
GMNN	15q-Del	0.505	1
Amp_20p12.1	Del_5q12.1	0.505	1
Del_2p12	Del_5q21.2	0.505	1
CRIPAK	Del_3p14.2	0.506	1
SELPLG	Amp_11p15.5	0.506	1
SELPLG	Del_1p13.2	0.506	1
NF2	C2orf29	0.506	1
NF2	FKBP9	0.506	1
NF2	Del_16p13.3	0.506	1
MAPK6	12p-Amp	0.506	1
ZBTB20	Amp_8p11.21	0.506	1
ERBB2	PRPS1	0.506	1
ERBB2	PTGDR	0.506	1
P2RY13	Del_5q21.2	0.506	1
IQCD	Del_5q22.2	0.506	1
C2orf29	Amp_11p15.5	0.506	1
C2orf29	Del_1p13.2	0.506	1
SLC26A8	12p-Amp	0.506	1
FYN	21q-Del	0.506	1
BIRC3	Del_5q21.2	0.506	1
IDH1	Amp_8p11.21	0.506	1
Amp_1q31.1	Del_7q31.1	0.506	1
Amp_6p21.1	Del_18q12.2	0.506	1
Amp_8q24.21	Del_17q24.3	0.506	1
Amp_17q24.1	Del_7q31.1	0.506	1
THOC7	14q-Del	0.507	1
ALPK2	C14orf184	0.507	1
ASXL1	ALG12	0.507	1
PTEN	7q-Amp	0.507	1
C14orf184	Amp_17q12	0.507	1
APC	NEXN	0.508	1
APC	Del_3q26.31	0.508	1
FMN2	Amp_8p11.21	0.508	1
FBXW7	PLAGL2	0.508	1
FBXW7	Del_2p12	0.508	1
ATM	Del_5q22.2	0.508	1
HIST1H1T	Del_14q11.2	0.508	1
TP53	MAPK6	0.509	1
TP53	Del_16p13.3	0.509	1
SMAD2	STARD3NL	0.509	1
SMAD2	NR1H3	0.509	1
SMAD2	FYN	0.509	1
SMAD2	GPATCH8	0.509	1
SMAD2	16q-Amp	0.509	1
NR1H3	Del_12p13.1	0.509	1
GPATCH8	Del_12p13.1	0.509	1
BIRC3	Del_12p13.1	0.509	1
CHUK	Del_10q25.2	0.51	1
ATXN3L	Del_21q21.1	0.51	1
12p-Amp	Amp_11p15.5	0.51	1
Amp_6p21.1	Del_10q25.2	0.51	1
Del_3q26.31	Del_21q21.1	0.51	1
ACVR1B	Amp_12p13.33	0.511	1
BCOR	THOC7	0.511	1
BCOR	GRB2	0.511	1
BCOR	Del_2q22.1	0.511	1
SMAD2	Amp_8p11.23	0.511	1
FMN2	Del_3p14.2	0.511	1
THOC7	Del_17q24.3	0.511	1
BCL9	12q-Amp	0.511	1
GRB2	LARP4B	0.511	1
DIP2B	RSPH3	0.511	1
RSPH3	Del_17q24.3	0.511	1
SLC12A6	12q-Amp	0.511	1
GMNN	Del_21q21.1	0.511	1
Amp_11p15.5	Del_4q22.1	0.511	1
Amp_12p13.33	Del_16q23.1	0.511	1
ARID1A	TP53	0.512	1
SOX9	2p-Amp	0.512	1
SOX9	2q-Amp	0.512	1
ACVR1B	Amp_17q12	0.512	1
6p-Amp	Del_5q23.3	0.512	1
Amp_20p11.21	Del_10q23.31	0.512	1
FAM123B	Del_17q24.3	0.513	1
MLH1	Del_15q21.1	0.513	1
BCOR	Amp_16p11.2	0.513	1
EGR1	Amp_8p11.21	0.513	1
NF1	Del_10q23.31	0.513	1
7q-Amp	21q-Del	0.514	1
CRIPAK	KDM6A	0.515	1
RNF43	C14orf184	0.515	1
SELPLG	Amp_20p11.21	0.515	1
OR4D10	ZBTB20	0.515	1
NF2	VCX2	0.515	1
PLEKHF2	Del_4q35.1	0.515	1
SMAD4	SLC26A8	0.515	1
SETD2	1p-Del	0.515	1
Amp_20p11.21	Del_16p13.3	0.515	1
APC	4q-Del	0.516	1
FAM123B	Del_21q11.2	0.516	1
TXNDC2	MVK	0.516	1
TXNDC2	PRRG1	0.516	1
STARD3NL	Del_4p16.1	0.516	1
NF1	17q-Amp	0.516	1
TOP2B	Amp_10q22.3	0.516	1
BIRC3	Del_4p16.1	0.516	1
16q-Amp	22q-Del	0.516	1
9p-Amp	Del_8p22	0.516	1
18p-Del	Amp_10q22.3	0.516	1
Amp_10q22.3	Del_6p25.3	0.516	1
ACVR1B	PLEKHF2	0.517	1
ST3GAL6	KDM6A	0.517	1
ST3GAL6	Del_16q23.1	0.517	1
PLEKHF2	Del_16q23.1	0.517	1
VCX2	KDM6A	0.517	1
C2orf29	Del_15q22.33	0.517	1
SMAD4	15q-Del	0.517	1
C14orf184	13q-Amp	0.517	1
8p-Amp	Amp_16p11.2	0.517	1
SOX9	NF2	0.518	1
RHOA	BCORL1	0.518	1
BCL9	IFT57	0.518	1
IQCD	BCORL1	0.518	1
PTEN	Amp_19q12	0.518	1
HIST1H1T	Del_18q12.2	0.518	1
Amp_20q13.12	Del_7q31.1	0.518	1
Del_3q26.31	Del_18p11.31	0.518	1
Del_4p16.1	Del_6p25.3	0.518	1
APC	21q-Del	0.519	1
MLH1	SMAD2	0.519	1
MLH1	15q-Del	0.519	1
MGA	Del_16p13.3	0.519	1
C2orf29	Del_5q12.1	0.519	1
RBBP7	8p-Amp	0.519	1
GMPS	8p-Amp	0.519	1
PRPS1	Amp_20p11.21	0.519	1
16p-Amp	8p-Amp	0.519	1
8p-Amp	Del_8q11.1	0.519	1
18p-Del	Del_7q31.1	0.519	1
ZFP36L2	L1TD1	0.52	1
ZFP36L2	NEXN	0.52	1
ZFP36L2	Amp_2q33.1	0.52	1
B2M	Amp_2q33.1	0.52	1
OR4D10	Amp_8q24.21	0.52	1
RPTN	5q-Del	0.52	1
RPTN	Amp_19q12	0.52	1
NF1	PLEKHF2	0.52	1
ATXN3L	RBPJ	0.52	1
ATXN3L	GMPS	0.52	1
ATXN3L	Del_8q11.1	0.52	1
ERBB2	Amp_12p13.33	0.52	1
RLIM	14q-Del	0.52	1
RBPJ	Amp_2q33.1	0.52	1
HLA-A	NEXN	0.52	1
HLA-A	Del_3q26.31	0.52	1
16p-Amp	5q-Del	0.52	1
6p-Amp	4q-Del	0.52	1
6p-Amp	Amp_11p15.5	0.52	1
7p-Amp	Del_3p26.3	0.52	1
9p-Amp	Amp_11p15.5	0.52	1
4q-Del	Amp_15q26.1	0.52	1
Amp_15q26.1	Del_1p13.2	0.52	1
Amp_19q12	Del_8q11.1	0.52	1
NF2	Amp_8p11.21	0.521	1
20q-Amp	Del_12p13.1	0.521	1
18q-Del	Amp_12p13.33	0.521	1
Amp_8p11.21	Del_4q35.1	0.521	1
WNT1	8p-Amp	0.522	1
SELPLG	MPHOSPH10	0.522	1
RLIM	SLC26A8	0.522	1
RLIM	FKBP9	0.522	1
RLIM	Del_16p13.3	0.522	1
ALDH1A3	1p-Del	0.522	1
CREBBP	Del_22q13.32	0.522	1
Amp_20q11.21	Del_3p14.2	0.522	1
FAM9A	9p-Amp	0.523	1
FAM9A	Del_10q21.1	0.523	1
THOC7	Del_10q21.1	0.523	1
NF1	Amp_8p11.23	0.523	1
GRB2	9p-Amp	0.523	1
RSPH3	9p-Amp	0.523	1
RSPH3	Del_10q21.1	0.523	1
VCX2	Del_15q22.33	0.523	1
9p-Amp	Del_2q22.1	0.523	1
TP53	IFT57	0.524	1
SELPLG	8q-Amp	0.524	1
RHOA	Amp_12p13.33	0.524	1
IQCD	Amp_12p13.33	0.524	1
C2orf29	7p-Amp	0.524	1
20p-Del	Amp_5p12	0.524	1
STARD3NL	C11orf30	0.525	1
STARD3NL	Amp_6p21.1	0.525	1
STARD3NL	Del_3p26.3	0.525	1
CHUK	P2RY13	0.525	1
CHUK	GPATCH8	0.525	1
P2RY13	Del_3p26.3	0.525	1
NR1H3	Amp_6p21.1	0.525	1
C11orf30	PCBP1	0.525	1
PCBP1	Del_3p26.3	0.525	1
FYN	Amp_6p21.1	0.525	1
FYN	Del_3p26.3	0.525	1
BIRC3	Del_3p26.3	0.525	1
16q-Amp	Del_3p26.3	0.525	1
9p-Amp	17p-Del	0.525	1
THOC7	Amp_13q12.13	0.526	1
PTCH1	2q-Amp	0.526	1
RB1	6p-Amp	0.526	1
Amp_1q31.1	Del_3p26.3	0.526	1
Amp_13q12.13	Del_2q22.1	0.526	1
Amp_6p21.1	Del_15q15.2	0.527	1
FAM123B	Amp_10q22.3	0.528	1
NF2	GMNN	0.528	1
FBXW7	HIST1H1T	0.528	1
PTCH1	Del_5q22.2	0.528	1
15q-Del	Del_3p14.2	0.528	1
Amp_12p13.33	Del_3p14.2	0.528	1
CRIPAK	VCX2	0.529	1
STARD3NL	8q-Amp	0.529	1
SMAD4	Del_7q31.1	0.529	1
CTNNB1	Del_10q25.2	0.529	1
2p-Amp	Del_5q12.1	0.529	1
2q-Amp	Del_5q12.1	0.529	1
14q-Del	Amp_5p12	0.529	1
Amp_15q26.1	Del_5q12.1	0.529	1
Amp_17q24.1	Del_1p36.11	0.529	1
CREBBP	8p-Amp	0.53	1
Amp_10q22.3	Amp_20q13.12	0.53	1
Del_3q26.31	Del_18q22.1	0.53	1
APC	MVK	0.531	1
APC	Amp_17q24.1	0.531	1
CRIPAK	Del_14q11.2	0.531	1
PRRG1	Amp_5p12	0.531	1
ROS1	Del_6p25.3	0.531	1
Amp_17q12	Del_21q11.2	0.531	1
Amp_20p11.21	Del_1p36.11	0.531	1
VCX2	Del_22q13.32	0.532	1
C2orf29	Del_3p14.2	0.532	1
DDX26B	Del_12p13.1	0.532	1
SLC26A8	Del_3p14.2	0.532	1
FKBP9	Del_3p14.2	0.532	1
ZNF486	Amp_16p11.2	0.532	1
CDH1	Del_4q35.1	0.533	1
GGT1	Del_10q25.2	0.533	1
IQCD	Del_21q21.1	0.533	1
IFT57	Del_21q21.1	0.533	1
21q-Del	Amp_5p12	0.533	1
Amp_16p11.2	Del_4q35.1	0.533	1
RNF43	Amp_8p11.23	0.534	1
TP53	GGT1	0.534	1
FAM123B	Del_10q23.31	0.534	1
SOX9	CREBBP	0.534	1
ACVR1B	DIP2B	0.534	1
MLH1	Del_10q23.31	0.534	1
OR4D10	Del_8p23.2	0.534	1
BMPR2	Del_6p25.3	0.534	1
IDH1	Amp_12p13.33	0.534	1
GMNN	Del_15q22.33	0.534	1
17q-Amp	Amp_12p13.33	0.534	1
Del_16q23.1	Del_17q24.3	0.534	1
ZFP36L2	Amp_8p11.21	0.535	1
RBPJ	Amp_8p11.21	0.535	1
PRPS1	Amp_13q12.2	0.535	1
12p-Amp	5q-Del	0.535	1
4q-Del	Amp_2q33.1	0.535	1
Amp_17q24.1	Del_21q21.1	0.535	1
DCLK2	7q-Amp	0.536	1
CRIPAK	ASXL1	0.537	1
ZFP36L2	IDH1	0.537	1
SELPLG	Amp_13q12.2	0.537	1
RPTN	IDH1	0.537	1
THOC7	7p-Amp	0.537	1
THOC7	8q-Amp	0.537	1
GRB2	7p-Amp	0.537	1
GRB2	8q-Amp	0.537	1
RSPH3	8q-Amp	0.537	1
ROS1	12p-Amp	0.537	1
RBPJ	17q-Amp	0.537	1
RBBP7	IDH1	0.537	1
HLA-A	MAP4K3	0.537	1
IDH1	Del_8q11.1	0.537	1
15q-Del	Amp_8p11.21	0.537	1
Amp_8q24.21	Amp_11p15.5	0.537	1
TP53	ATM	0.538	1
B2M	Del_15q15.2	0.538	1
PRKDC	C2orf29	0.538	1
PRKDC	20p-Del	0.538	1
RPTN	Del_15q15.2	0.538	1
ALG12	PIK3R1	0.538	1
PIK3R1	C14orf184	0.538	1
16p-Amp	Del_15q15.2	0.538	1
2p-Amp	Del_3p14.2	0.538	1
6p-Amp	Del_3p14.2	0.538	1
Amp_6p21.1	Del_15q21.1	0.538	1
Amp_15q26.1	Del_3p14.2	0.538	1
Amp_20p11.21	Del_1p13.2	0.538	1
TXNDC2	8p-Del	0.539	1
TXNDC2	Amp_13q12.2	0.539	1
SELPLG	Amp_20q13.12	0.539	1
Del_1p36.11	Del_17q24.3	0.539	1
ARID1A	OR4D10	0.54	1
CRIPAK	15q-Del	0.54	1
PRKDC	PLEKHF2	0.54	1
ATXN3L	1p-Del	0.54	1
RLIM	L1TD1	0.54	1
RLIM	5q-Del	0.54	1
RLIM	Amp_19q12	0.54	1
RLIM	Del_3q26.31	0.54	1
MPHOSPH10	NEXN	0.54	1
MPHOSPH10	Amp_19q12	0.54	1
L1TD1	1p-Del	0.54	1
BMPR2	Amp_8p11.23	0.54	1
PTGDR	Amp_13q22.1	0.54	1
7q-Amp	Del_4q22.1	0.54	1
1p-Del	Amp_19q12	0.54	1
Amp_13q22.1	Del_7q31.1	0.54	1
FAM123B	12q-Amp	0.541	1
TXNDC2	STARD3NL	0.541	1
TXNDC2	DCLK2	0.541	1
STARD3NL	Del_19p13.3	0.541	1
SELPLG	C2orf29	0.541	1
SELPLG	ALDH1A3	0.541	1
SELPLG	Del_16p13.3	0.541	1
MAPK6	C2orf29	0.541	1
MAPK6	Del_16p13.3	0.541	1
P2RY13	TOP2B	0.541	1
P2RY13	Del_19p13.3	0.541	1
NR1H3	Del_6p25.3	0.541	1
PCBP1	TOP2B	0.541	1
PCBP1	Del_6p25.3	0.541	1
PCBP1	Del_6q26	0.541	1
C2orf29	SLC26A8	0.541	1
C2orf29	Del_16p13.3	0.541	1
TOP2B	16q-Amp	0.541	1
DCLK2	Del_6p25.3	0.541	1
FKBP9	Del_16p13.3	0.541	1
ALDH1A3	Del_16p13.3	0.541	1
BIRC3	Del_6p25.3	0.541	1
Amp_6p21.1	Del_1p33	0.541	1
Amp_17q12	Del_5q22.2	0.541	1
BCOR	PLEKHF2	0.542	1
VCX2	LARP4B	0.542	1
DDX26B	21q-Del	0.542	1
CDK12	12p-Amp	0.542	1
Amp_10q22.3	Amp_13q22.1	0.542	1
ACVR1B	8p-Amp	0.543	1
GGT1	Amp_17q24.1	0.543	1
RPTN	PIK3R1	0.543	1
ATXN3L	Del_4q35.1	0.543	1
TPRKB	ERBB2	0.543	1
RLIM	Del_8p22	0.543	1
HIST1H1T	Amp_1q31.1	0.543	1
HIST1H1T	Amp_17q24.1	0.543	1
Amp_2q33.1	Del_4q35.1	0.543	1
Amp_6p21.1	Del_18p11.31	0.543	1
Amp_8q24.21	Del_4q22.1	0.543	1
Del_5q22.2	Del_12p13.1	0.543	1
TP53	CDH1	0.544	1
NF2	4q-Del	0.544	1
FAM123B	PLAGL2	0.545	1
ACVR1B	IFT57	0.545	1
RHOA	Del_16q23.1	0.545	1
PRKDC	GMNN	0.545	1
IQCD	Del_16q23.1	0.545	1
PRRG1	BCORL1	0.545	1
BCORL1	Amp_10q22.3	0.545	1
THOC7	20p-Del	0.546	1
BCL9	20p-Del	0.546	1
NLRC4	20p-Del	0.546	1
PIK3R1	Amp_16p11.2	0.546	1
SETD2	6p-Amp	0.546	1
APC	SOX9	0.547	1
APC	DIP2B	0.547	1
TXNDC2	Amp_20q13.12	0.547	1
RPTN	Del_15q21.1	0.547	1
16p-Amp	Del_15q21.1	0.547	1
Del_8q11.1	Del_14q11.2	0.547	1
MGA	Del_3q26.31	0.548	1
PRRG1	Del_5q22.2	0.548	1
MAP4K3	Del_5q23.3	0.548	1
17p-Del	Amp_5p12	0.548	1
EGR1	Del_21q11.2	0.549	1
PLEKHF2	Del_21q11.2	0.549	1
VCX2	Del_21q11.2	0.549	1
C2orf29	Del_21q11.2	0.549	1
C14orf184	7p-Amp	0.549	1
TP53	Amp_16p11.2	0.55	1
TXNDC2	Amp_1q31.1	0.55	1
ERBB2	TOP2B	0.55	1
ERBB2	7p-Amp	0.55	1
ERBB2	Del_6q26	0.55	1
TOP2B	Amp_1q31.1	0.55	1
CDK12	Amp_16p11.2	0.55	1
Amp_1q31.1	Del_6p25.3	0.55	1
Amp_17q24.1	Del_4q22.1	0.55	1
APC	C2orf29	0.551	1
APC	Del_16p13.3	0.551	1
FAM123B	Amp_6p21.1	0.551	1
MLH1	8p-Amp	0.551	1
SMAD4	Amp_13q12.2	0.551	1
GMNN	Del_21q11.2	0.551	1
APC	8p-Del	0.552	1
ACVR1B	Del_10q21.1	0.552	1
BCOR	Del_15q15.2	0.552	1
BMPR2	21q-Del	0.552	1
ATM	Amp_8p11.21	0.552	1
KDM6A	Del_10q21.1	0.552	1
7p-Amp	Del_1p36.11	0.552	1
9p-Amp	Del_16q23.1	0.552	1
Amp_19q12	Del_18q21.2	0.552	1
Del_1p36.11	Del_19p13.3	0.552	1
CRIPAK	DIP2B	0.553	1
CRIPAK	LARP4B	0.553	1
CRIPAK	4p-Del	0.553	1
NF1	Del_10q21.1	0.553	1
RB1	Del_16q23.1	0.553	1
Amp_12p13.33	Amp_20p12.1	0.553	1
SOX9	PRPS1	0.554	1
SMAD2	RPTN	0.554	1
SMAD2	RBPJ	0.554	1
SMAD2	16p-Amp	0.554	1
GGT1	Del_1p33	0.554	1
EGR1	Del_10q21.1	0.554	1
RPTN	Del_12p13.1	0.554	1
PLEKHF2	9p-Amp	0.554	1
PLEKHF2	Del_10q21.1	0.554	1
PIK3R1	4p-Del	0.554	1
VCX2	Del_10q21.1	0.554	1
HLA-A	Del_12p13.1	0.554	1
PRPS1	Del_5q23.3	0.554	1
PTGDR	Del_5q23.3	0.554	1
CTNNB1	Del_15q11.2	0.554	1
16p-Amp	Del_12p13.1	0.554	1
Amp_17q12	Del_15q11.2	0.554	1
Del_3q26.31	Del_15q22.33	0.554	1
Del_5q23.3	Del_7q31.1	0.554	1
RPTN	18p-Del	0.555	1
RPTN	Amp_20p11.21	0.555	1
ALPK2	6p-Amp	0.555	1
ASXL1	6p-Amp	0.555	1
Amp_8p11.21	Amp_15q26.1	0.555	1
GPATCH8	Amp_5p12	0.556	1
BIRC3	Amp_5p12	0.556	1
HIST1H1T	Del_8p22	0.556	1
IDH1	Del_4q22.1	0.556	1
GMNN	14q-Del	0.556	1
17q-Amp	Del_4q22.1	0.556	1
Amp_1q31.1	Amp_8p11.21	0.556	1
Amp_8p11.23	Del_8q11.1	0.556	1
Amp_13q22.1	Del_10q23.31	0.556	1
APC	FBXW7	0.557	1
BMPR2	Amp_5p12	0.557	1
CRIPAK	RHOA	0.558	1
CRIPAK	IQCD	0.558	1
CRIPAK	IFT57	0.558	1
SELPLG	Amp_17q12	0.558	1
ALPK2	Del_16p13.3	0.558	1
ASXL1	C2orf29	0.558	1
RLIM	MAP4K3	0.558	1
RLIM	IDH1	0.558	1
PTEN	Amp_12p13.33	0.558	1
Del_2p12	Del_5q22.2	0.558	1
PRRG1	Amp_16p11.2	0.559	1
APC	CREBBP	0.56	1
WNT1	21q-Del	0.56	1
SELPLG	L1TD1	0.56	1
SELPLG	5q-Del	0.56	1
SELPLG	Amp_2q33.1	0.56	1
SELPLG	Amp_19q12	0.56	1
SELPLG	Del_3q26.31	0.56	1
RHOA	Del_4q35.1	0.56	1
ATXN3L	SLC26A8	0.56	1
ATXN3L	CTNNB1	0.56	1
ATXN3L	Del_16p13.3	0.56	1
C2orf29	Del_3q26.31	0.56	1
SLC26A8	Amp_19q12	0.56	1
FKBP9	Del_3q26.31	0.56	1
C14orf184	Del_5q21.2	0.56	1
CTNNB1	5q-Del	0.56	1
Amp_2q33.1	Del_16p13.3	0.56	1
Amp_19q12	Del_16p13.3	0.56	1
NF1	Amp_15q26.1	0.561	1
L1TD1	Del_3p14.2	0.561	1
BCORL1	Del_5q21.2	0.561	1
KDM6A	8q-Amp	0.561	1
5q-Del	Del_3p14.2	0.561	1
Amp_19q12	Del_3p14.2	0.561	1
Amp_20q11.21	Del_12p13.1	0.561	1
THOC7	Del_14q11.2	0.562	1
THOC7	Del_15q21.1	0.562	1
ASXL1	LARP4B	0.562	1
DIP2B	Amp_17q12	0.562	1
ROS1	Del_5q22.2	0.562	1
MAP4K3	Amp_11p15.5	0.562	1
IDH1	12p-Amp	0.562	1
IDH1	4q-Del	0.562	1
IDH1	Del_1p13.2	0.562	1
7q-Amp	Del_1p36.11	0.562	1
Del_2q22.1	Del_15q21.1	0.562	1
TXNDC2	Del_15q15.2	0.563	1
PRPS1	12p-Amp	0.563	1
PRPS1	8p-Del	0.563	1
PRPS1	Del_1p13.2	0.563	1
PTGDR	8p-Del	0.563	1
PTGDR	Del_1p13.2	0.563	1
6p-Amp	4p-Del	0.563	1
CDH1	Del_12p13.1	0.564	1
BCOR	Del_15q21.1	0.564	1
OR4D10	Del_19p13.3	0.564	1
PLEKHF2	Amp_20p11.21	0.564	1
DDX26B	Del_6p25.3	0.564	1
SMAD4	Del_15q15.2	0.564	1
NEXN	Del_22q13.32	0.565	1
4q-Del	Amp_8p11.23	0.565	1
SOX9	PRKDC	0.566	1
SOX9	ASXL1	0.566	1
RHOA	13q-Amp	0.566	1
VCX2	CDK12	0.566	1
Amp_10q22.3	Amp_12p13.33	0.566	1
Amp_17q12	Del_5q23.3	0.566	1
APC	Amp_15q26.1	0.567	1
FAM123B	NR1H3	0.567	1
MLH1	PCBP1	0.567	1
MLH1	16q-Amp	0.567	1
C14orf184	22q-Del	0.567	1
8q-Amp	Del_6q26	0.567	1
15q-Del	Del_12p13.1	0.567	1
APC	TXNDC2	0.568	1
THOC7	BMPR2	0.568	1
THOC7	Del_10q25.2	0.568	1
NF1	Amp_1q31.1	0.568	1
RSPH3	Del_10q25.2	0.568	1
ROS1	7q-Amp	0.568	1
SETD2	12p-Amp	0.568	1
CDH1	Del_16q23.1	0.569	1
BCOR	Amp_12p13.33	0.569	1
MGA	Del_4q35.1	0.569	1
SETD2	12q-Amp	0.569	1
Amp_12p13.33	Del_17q24.3	0.569	1
ACVR1B	CDK12	0.57	1
SELPLG	4p-Del	0.57	1
FBXW7	BCL9	0.57	1
ERBB2	Amp_8p11.23	0.57	1
NR1H3	SLC12A6	0.57	1
NLRC4	PCBP1	0.57	1
RLIM	Del_1p36.11	0.57	1
DCLK2	BCORL1	0.57	1
CDK12	Del_16q23.1	0.57	1
9p-Amp	Del_5q22.2	0.57	1
Amp_1q31.1	Amp_8p11.23	0.57	1
ZFP36L2	CHUK	0.571	1
B2M	Del_3p26.3	0.571	1
SMAD2	Amp_20p12.1	0.571	1
RPTN	C11orf30	0.571	1
RPTN	Del_3p26.3	0.571	1
CHUK	RBPJ	0.571	1
CHUK	GMPS	0.571	1
CHUK	Del_10q23.31	0.571	1
PTCH1	Amp_8p11.21	0.571	1
PLAGL2	Amp_12p13.33	0.571	1
SMAD4	ZNF486	0.571	1
RBBP7	Del_3p26.3	0.571	1
PRPS1	Amp_13q12.13	0.571	1
Amp_20p12.1	Del_12p13.1	0.571	1
Del_3p26.3	Del_8q11.1	0.571	1
ACVR1B	PRRG1	0.572	1
ACVR1B	Amp_10q22.3	0.572	1
MVK	Del_16q23.1	0.572	1
PRPS1	Del_5q12.1	0.572	1
HIST1H1T	7q-Amp	0.572	1
Amp_10q22.3	Del_16q23.1	0.572	1
Amp_11p15.5	Amp_13q12.2	0.572	1
Amp_20p12.1	Del_5q23.3	0.572	1
Amp_20q13.12	Del_2q22.1	0.572	1
Del_5q12.1	Del_7q31.1	0.572	1
GGT1	Del_10q23.31	0.573	1
SMAD4	L1TD1	0.573	1
SMAD4	5q-Del	0.573	1
SMAD4	Amp_19q12	0.573	1
TXNDC2	Del_14q11.2	0.574	1
TXNDC2	Del_15q21.1	0.574	1
ERBB2	Del_10q23.31	0.574	1
ALG12	ROS1	0.574	1
ROS1	C14orf184	0.574	1
Amp_8q24.21	Del_15q11.2	0.574	1
Amp_20q13.12	Del_2p12	0.574	1
Del_6p25.3	Del_14q11.2	0.574	1
SMAD2	RLIM	0.575	1
SMAD2	MPHOSPH10	0.575	1
SELPLG	20q-Amp	0.575	1
ASXL1	15q-Del	0.575	1
PTCH1	Del_5q21.2	0.575	1
15q-Del	Amp_17q12	0.575	1
1p-Del	Del_12p13.1	0.575	1
ZFP36L2	21q-Del	0.576	1
ZFP36L2	Del_5q21.2	0.576	1
B2M	21q-Del	0.576	1
NF2	Amp_8p11.23	0.576	1
MVK	Del_21q21.1	0.576	1
CDK12	Del_3p14.2	0.576	1
Del_5q21.2	Del_8q11.1	0.576	1
PLAGL2	Del_21q21.1	0.577	1
DIP2B	4p-Del	0.577	1
LARP4B	Amp_8p11.23	0.577	1
Amp_8p11.23	Del_17q24.3	0.577	1
SELPLG	MAP4K3	0.578	1
MAPK6	IDH1	0.578	1
FAM9A	ERBB2	0.578	1
THOC7	Amp_1q31.1	0.578	1
ZBTB20	C2orf29	0.578	1
ERBB2	GRB2	0.578	1
C2orf29	MAP4K3	0.578	1
SLC26A8	IDH1	0.578	1
SLC26A8	17q-Amp	0.578	1
FKBP9	IDH1	0.578	1
ALDH1A3	MAP4K3	0.578	1
BIRC3	CTNNB1	0.578	1
GMNN	Amp_8q24.21	0.578	1
CTNNB1	16q-Amp	0.578	1
Amp_1q31.1	Del_2q22.1	0.578	1
ATXN3L	5q-Del	0.579	1
SLC12A6	Del_10q25.2	0.579	1
NEXN	5q-Del	0.579	1
17q-Amp	Del_4q35.1	0.579	1
5q-Del	Del_3q26.31	0.579	1
Amp_2q33.1	Del_3q26.31	0.579	1
CRIPAK	Del_15q11.2	0.58	1
NF2	Amp_17q24.1	0.58	1
ERBB2	Del_4q35.1	0.58	1
ALPK2	Amp_8p11.21	0.58	1
Amp_17q24.1	Del_4q35.1	0.58	1
Amp_20q12	Del_3q26.31	0.58	1
TXNDC2	Del_8p22	0.581	1
FBXW7	Amp_8p11.21	0.581	1
ROS1	Del_5q21.2	0.581	1
Amp_6p21.1	Del_15q11.2	0.581	1
APC	RHOA	0.582	1
APC	IQCD	0.582	1
FAM123B	Del_6q26	0.582	1
SLC26A8	8p-Amp	0.582	1
C14orf184	18p-Del	0.582	1
C14orf184	Amp_20p11.21	0.582	1
8p-Amp	Del_16p13.3	0.582	1
APC	CRIPAK	0.583	1
RHOA	12q-Amp	0.583	1
RHOA	Del_10q21.1	0.583	1
THOC7	Amp_8q24.21	0.583	1
IQCD	12q-Amp	0.583	1
PTCH1	Amp_12p13.33	0.583	1
GRB2	Amp_8q24.21	0.583	1
RSPH3	Amp_8q24.21	0.583	1
HIST1H1T	Del_18q22.1	0.583	1
ZNF486	12q-Amp	0.583	1
ZNF486	9p-Amp	0.583	1
B2M	Del_15q11.2	0.584	1
MLH1	Del_15q11.2	0.584	1
FMN2	12q-Amp	0.584	1
STARD3NL	Amp_16p11.2	0.584	1
DCLK2	Amp_16p11.2	0.584	1
BIRC3	Amp_16p11.2	0.584	1
CTNNB1	4q-Del	0.584	1
16p-Amp	Del_15q11.2	0.584	1
9p-Amp	Del_15q15.2	0.584	1
TP53	ROS1	0.585	1
ASXL1	9p-Amp	0.585	1
ASXL1	Del_10q21.1	0.585	1
MPHOSPH10	Amp_8p11.21	0.585	1
8p-Amp	18p-Del	0.585	1
Amp_8p11.23	Del_6p25.3	0.585	1
Amp_8p11.23	Del_6q26	0.585	1
Amp_10q22.3	Del_4q22.1	0.585	1
Amp_17q12	Del_10q21.1	0.585	1
Amp_20p12.1	Del_21q21.1	0.585	1
CRIPAK	PRRG1	0.586	1
CRIPAK	Amp_10q22.3	0.586	1
SOX9	SMAD4	0.586	1
TXNDC2	Amp_20q11.21	0.586	1
OR4D10	7p-Amp	0.586	1
RHOA	PRKDC	0.586	1
PRKDC	Amp_12p13.33	0.586	1
GMNN	20p-Amp	0.586	1
GMNN	Del_8p23.2	0.586	1
Amp_8q24.21	Del_22q13.32	0.586	1
Amp_19q12	Del_21q11.2	0.586	1
CRIPAK	17p-Del	0.587	1
ZFP36L2	Del_6p25.3	0.587	1
ZFP36L2	Del_6q26	0.587	1
ZFP36L2	Del_19p13.3	0.587	1
TXNDC2	RBPJ	0.587	1
TXNDC2	RBBP7	0.587	1
TXNDC2	16p-Amp	0.587	1
STARD3NL	Del_5q22.2	0.587	1
RPTN	TOP2B	0.587	1
ATXN3L	ASXL1	0.587	1
ASXL1	L1TD1	0.587	1
ASXL1	4q-Del	0.587	1
ASXL1	Amp_19q12	0.587	1
ASXL1	Del_3q26.31	0.587	1
RBBP7	22q-Del	0.587	1
RBBP7	Del_6p25.3	0.587	1
RBBP7	Del_6q26	0.587	1
TOP2B	16p-Amp	0.587	1
HLA-A	22q-Del	0.587	1
GPATCH8	Del_5q22.2	0.587	1
NEXN	Amp_17q12	0.587	1
16p-Amp	Del_6q26	0.587	1
4q-Del	Amp_17q12	0.587	1
Del_6p25.3	Del_8q11.1	0.587	1
GMNN	Del_15q15.2	0.588	1
18p-Del	Del_3q26.31	0.588	1
SMAD2	12p-Amp	0.589	1
SELPLG	Amp_13q12.13	0.589	1
ATXN3L	8p-Del	0.589	1
ALPK2	21q-Del	0.589	1
GRB2	Del_1p33	0.589	1
RLIM	Del_14q11.2	0.589	1
MAP4K3	Del_3p14.2	0.589	1
NEXN	8p-Del	0.589	1
IDH1	Del_3p14.2	0.589	1
8p-Del	Amp_2q33.1	0.589	1
Del_1p33	Del_2q22.1	0.589	1
APC	SETD2	0.59	1
RB1	Del_6p25.3	0.59	1
17q-Amp	Del_15q22.33	0.59	1
2p-Amp	Del_8p23.2	0.59	1
2q-Amp	Del_8p23.2	0.59	1
6p-Amp	Del_8p23.2	0.59	1
ARID1A	GRB2	0.591	1
GRB2	Del_15q11.2	0.591	1
DIP2B	9p-Amp	0.591	1
14q-Del	Amp_8q24.21	0.591	1
ERBB2	22q-Del	0.592	1
ERBB2	Del_4p16.1	0.592	1
22q-Del	Amp_1q31.1	0.592	1
22q-Del	Amp_17q24.1	0.592	1
Amp_17q12	Del_21q21.1	0.592	1
SOX9	GGT1	0.593	1
SOX9	TPRKB	0.593	1
SOX9	HIST1H1T	0.593	1
GMNN	Del_14q11.2	0.593	1
GMNN	Del_15q21.1	0.593	1
Del_1p33	Del_10q23.31	0.593	1
SMAD2	7q-Amp	0.594	1
PTCH1	Del_7q31.1	0.594	1
IFT57	Del_21q11.2	0.594	1
HIST1H1T	Del_17p12	0.594	1
SMAD2	C2orf29	0.595	1
SELPLG	Del_12p13.1	0.595	1
FAM9A	20p-Amp	0.595	1
IQCD	CDK12	0.595	1
NLRC4	Amp_1q31.1	0.595	1
PIK3R1	Del_22q13.32	0.595	1
C14orf184	Amp_13q12.2	0.595	1
12p-Amp	Del_18q12.2	0.595	1
20p-Amp	Del_2q22.1	0.595	1
APC	1p-Del	0.596	1
SMAD2	ATM	0.596	1
FMN2	DCLK2	0.596	1
FMN2	FYN	0.596	1
PTCH1	Del_10q23.31	0.596	1
TOP2B	Del_10q23.31	0.596	1
NEXN	14q-Del	0.596	1
ATM	Del_12p13.1	0.596	1
9p-Amp	Del_15q21.1	0.596	1
OR4D10	Del_8p22	0.597	1
EGR1	Del_1p36.11	0.597	1
ATXN3L	IDH1	0.597	1
IQCD	PTEN	0.597	1
PLEKHF2	Del_1p36.11	0.597	1
MAP4K3	Amp_2q33.1	0.597	1
MAP4K3	Del_3q26.31	0.597	1
Amp_12p13.33	Del_10q23.31	0.597	1
TXNDC2	Amp_13q12.13	0.598	1
ACVR1B	P2RY13	0.598	1
ACVR1B	DCLK2	0.598	1
ACVR1B	GPATCH8	0.598	1
STARD3NL	KDM6A	0.598	1
ASXL1	PRPS1	0.598	1
ASXL1	Del_7q31.1	0.598	1
PCBP1	KDM6A	0.598	1
RLIM	Amp_8p11.23	0.598	1
ROS1	RBPJ	0.598	1
MPHOSPH10	Amp_8p11.23	0.598	1
DCLK2	KDM6A	0.598	1
PTEN	8p-Amp	0.598	1
LARP4B	Amp_10q22.3	0.598	1
GPATCH8	Del_16q23.1	0.598	1
PRPS1	Amp_17q12	0.598	1
BIRC3	Del_16q23.1	0.598	1
HIST1H1T	Del_18q21.2	0.598	1
GMNN	Amp_8p11.23	0.598	1
Amp_10q22.3	Del_17q24.3	0.598	1
Amp_17q12	Del_7q31.1	0.598	1
SELPLG	13q-Amp	0.599	1
C11orf30	Amp_12p13.33	0.599	1
CTNNB1	Amp_8p11.21	0.599	1
Amp_12p13.33	Del_3p26.3	0.599	1
SOX9	CHUK	0.6	1
PRRG1	Del_8p23.2	0.6	1
PCBP1	Amp_20p11.21	0.6	1
VCX2	BMPR2	0.6	1
DCLK2	Amp_20p11.21	0.6	1
C14orf184	Amp_13q22.1	0.6	1
20p-Amp	Amp_10q22.3	0.6	1
ERBB2	8p-Del	0.601	1
FAM123B	C14orf184	0.602	1
ZFP36L2	Amp_5p12	0.602	1
GGT1	Del_1p13.2	0.602	1
NF2	Amp_10q22.3	0.602	1
TPRKB	12p-Amp	0.602	1
PLEKHF2	8q-Amp	0.602	1
RBPJ	Amp_5p12	0.602	1
HLA-A	Amp_5p12	0.602	1
HIST1H1T	4q-Del	0.602	1
HIST1H1T	Amp_11p15.5	0.602	1
Amp_5p12	Del_8q11.1	0.602	1
FMN2	Amp_8p11.23	0.603	1
FBXW7	PCBP1	0.603	1
FBXW7	16q-Amp	0.603	1
SMAD4	Del_10q21.1	0.603	1
IDH1	CTNNB1	0.603	1
CTNNB1	17q-Amp	0.603	1
ALG12	Amp_20p12.1	0.604	1
PTEN	8p-Del	0.604	1
CTNNB1	8p-Amp	0.604	1
13q-Amp	Del_3p14.2	0.604	1
RNF43	12p-Amp	0.605	1
MLH1	12p-Amp	0.605	1
MLH1	Amp_11p15.5	0.605	1
12p-Amp	4p-Del	0.605	1
CRIPAK	Del_15q22.33	0.606	1
ZFP36L2	20p-Amp	0.606	1
CDH1	RSPH3	0.606	1
P2RY13	Amp_12p13.33	0.606	1
RSPH3	Amp_20p12.1	0.606	1
PTEN	Del_6p25.3	0.606	1
20p-Amp	Del_5q12.1	0.606	1
Del_5q22.2	Del_6p25.3	0.606	1
FBXW7	Del_16p13.3	0.607	1
ERBB2	17p-Del	0.607	1
ASXL1	22q-Del	0.607	1
IFT57	20p-Del	0.607	1
PTEN	Amp_8q24.21	0.607	1
SETD2	Del_3p14.2	0.607	1
KDM6A	Amp_8p11.21	0.607	1
12p-Amp	Del_21q11.2	0.607	1
22q-Del	Amp_17q12	0.607	1
APC	C11orf30	0.608	1
ARID1A	8p-Amp	0.608	1
TP53	BCORL1	0.608	1
TXNDC2	RLIM	0.608	1
OR4D10	Amp_16p11.2	0.608	1
RLIM	Del_19p13.3	0.608	1
MPHOSPH10	Del_6p25.3	0.608	1
9p-Amp	8p-Del	0.608	1
THOC7	Del_10q23.31	0.609	1
ERBB2	Del_22q13.32	0.609	1
ASXL1	Del_4q22.1	0.609	1
Amp_5p12	Del_14q11.2	0.609	1
Amp_15q26.1	Del_5q21.2	0.609	1
Amp_17q24.1	Del_22q13.32	0.609	1
Amp_20q12	Del_12p13.1	0.609	1
ARID1A	Amp_17q24.1	0.61	1
SOX9	ERBB2	0.61	1
EGR1	ERBB2	0.61	1
ST3GAL6	Amp_1q31.1	0.61	1
FYN	Amp_20p12.1	0.61	1
9p-Amp	Del_10q21.1	0.61	1
Amp_17q24.1	Del_15q11.2	0.61	1
CRIPAK	P2RY13	0.611	1
CRIPAK	PCBP1	0.611	1
CRIPAK	DCLK2	0.611	1
GGT1	Del_5q12.1	0.611	1
PRKDC	17q-Amp	0.611	1
ATXN3L	20p-Amp	0.611	1
ATXN3L	Del_8p23.2	0.611	1
MVK	12q-Amp	0.611	1
MVK	9p-Amp	0.611	1
PRRG1	9p-Amp	0.611	1
NEXN	Del_8p23.2	0.611	1
CREBBP	Amp_10q22.3	0.611	1
12q-Amp	Amp_10q22.3	0.611	1
12q-Amp	Del_21q21.1	0.611	1
Amp_10q22.3	Del_10q21.1	0.611	1
RNF43	Amp_8p11.21	0.612	1
SELPLG	CHUK	0.612	1
FBXW7	Del_3p26.3	0.612	1
CHUK	Del_16p13.3	0.612	1
C11orf30	C2orf29	0.612	1
C2orf29	Amp_6p21.1	0.612	1
ALDH1A3	Amp_6p21.1	0.612	1
7q-Amp	8p-Del	0.612	1
BCOR	Del_15q11.2	0.613	1
GMNN	13q-Amp	0.613	1
ASXL1	IDH1	0.614	1
C11orf30	12p-Amp	0.614	1
PRPS1	8p-Amp	0.614	1
ATM	8p-Amp	0.614	1
7p-Amp	Del_21q11.2	0.614	1
ACVR1B	21q-Del	0.615	1
SMAD2	Amp_2q33.1	0.615	1
SMAD2	Amp_19q12	0.615	1
ATXN3L	Del_12p13.1	0.615	1
ALG12	Del_5q22.2	0.615	1
C14orf184	Del_5q22.2	0.615	1
FYN	Del_21q21.1	0.615	1
NEXN	Del_12p13.1	0.615	1
BIRC3	Del_21q21.1	0.615	1
16q-Amp	Del_21q21.1	0.615	1
Amp_20p12.1	Del_16p13.3	0.615	1
Del_5q21.2	Del_16q23.1	0.615	1
CDH1	7q-Amp	0.616	1
ZBTB20	IDH1	0.616	1
IDH1	17q-Amp	0.616	1
6p-Amp	22q-Del	0.616	1
6p-Amp	Del_4p16.1	0.616	1
8p-Amp	Del_10q21.1	0.616	1
Amp_15q26.1	Del_4p16.1	0.616	1
ZFP36L2	BCL9	0.617	1
TXNDC2	Del_15q11.2	0.617	1
RPTN	BCORL1	0.617	1
BCL9	RBPJ	0.617	1
BCORL1	16p-Amp	0.617	1
Del_6p25.3	Del_15q11.2	0.617	1
FMN2	Del_19p13.3	0.618	1
NF1	Del_16q23.1	0.618	1
ATXN3L	Amp_13q22.1	0.618	1
PLAGL2	Del_21q11.2	0.618	1
Amp_19q12	Del_18q12.2	0.618	1
Del_3q26.31	Del_18q12.2	0.618	1
APC	Del_3p14.2	0.619	1
FAM123B	CDH1	0.619	1
EGR1	Amp_8p11.23	0.619	1
PLEKHF2	Amp_8p11.23	0.619	1
C2orf29	Del_15q15.2	0.619	1
GGT1	Amp_20p11.21	0.62	1
RLIM	22q-Del	0.62	1
HIST1H1T	Del_3p14.2	0.62	1
GMNN	Del_8p22	0.62	1
ACVR1B	BMPR2	0.621	1
PLEKHF2	Del_1p33	0.621	1
VCX2	Del_1p33	0.621	1
CTNNB1	22q-Del	0.621	1
KDM6A	Del_10q25.2	0.621	1
17q-Amp	Del_21q11.2	0.621	1
8p-Amp	15q-Del	0.621	1
OR4D10	Del_16q23.1	0.622	1
CHUK	Del_4q22.1	0.622	1
FBXW7	8q-Amp	0.623	1
PRRG1	CDK12	0.623	1
MPHOSPH10	Amp_5p12	0.623	1
SMAD4	20p-Amp	0.623	1
SMAD4	Del_8p23.2	0.623	1
CREBBP	Del_12p13.1	0.623	1
CTNNB1	Amp_16p11.2	0.623	1
Del_12p13.1	Del_15q22.33	0.623	1
SOX9	TOP2B	0.624	1
BCOR	P2RY13	0.624	1
BCOR	DCLK2	0.624	1
BCOR	GPATCH8	0.624	1
BCOR	16q-Amp	0.624	1
GGT1	8p-Del	0.624	1
STARD3NL	Del_4q22.1	0.624	1
STARD3NL	Del_17q24.3	0.624	1
TPRKB	8p-Del	0.624	1
NR1H3	DIP2B	0.624	1
NR1H3	LARP4B	0.624	1
NR1H3	Del_17q24.3	0.624	1
DIP2B	PCBP1	0.624	1
DIP2B	GPATCH8	0.624	1
DIP2B	16q-Amp	0.624	1
PCBP1	Del_17q24.3	0.624	1
ROS1	6p-Amp	0.624	1
RBPJ	Amp_13q12.13	0.624	1
PTEN	Amp_16p11.2	0.624	1
LARP4B	16q-Amp	0.624	1
MAP4K3	8q-Amp	0.624	1
CDK12	15q-Del	0.624	1
CDK12	Amp_12p13.33	0.624	1
PRPS1	Amp_8p11.21	0.624	1
PTGDR	Amp_8p11.21	0.624	1
BIRC3	Del_4q22.1	0.624	1
BIRC3	Del_17q24.3	0.624	1
IDH1	8q-Amp	0.624	1
12q-Amp	Del_4q22.1	0.624	1
Del_5q23.3	Del_6p25.3	0.624	1
ACVR1B	SMAD4	0.625	1
15q-Del	Amp_8p11.23	0.625	1
THOC7	7q-Amp	0.626	1
RSPH3	7q-Amp	0.626	1
C14orf184	Amp_13q12.13	0.626	1
ASXL1	Del_1p36.11	0.627	1
ALG12	Amp_12p13.33	0.627	1
PRRG1	Amp_8p11.21	0.627	1
SOX9	THOC7	0.628	1
TXNDC2	C2orf29	0.628	1
TXNDC2	ALDH1A3	0.628	1
TXNDC2	Del_16p13.3	0.628	1
SELPLG	Del_6p25.3	0.628	1
SELPLG	Del_15q21.1	0.628	1
FAM9A	Del_5q23.3	0.628	1
THOC7	Del_5q23.3	0.628	1
GRB2	Del_5q23.3	0.628	1
RSPH3	Del_5q23.3	0.628	1
C2orf29	TOP2B	0.628	1
C2orf29	Del_6p25.3	0.628	1
C2orf29	Del_6q26	0.628	1
C2orf29	Del_15q21.1	0.628	1
C2orf29	Del_19p13.3	0.628	1
SLC26A8	Del_6p25.3	0.628	1
ALDH1A3	Del_6p25.3	0.628	1
ALDH1A3	Del_6q26	0.628	1
CDK12	12q-Amp	0.628	1
7q-Amp	Del_8q11.1	0.628	1
CREBBP	Del_4q35.1	0.629	1
13q-Amp	Del_10q23.31	0.629	1
TXNDC2	15q-Del	0.63	1
NF1	Del_7q31.1	0.63	1
ALPK2	20p-Del	0.63	1
PIK3R1	Del_5q22.2	0.63	1
TOP2B	Amp_12p13.33	0.63	1
ATM	12p-Amp	0.63	1
20p-Del	Amp_17q12	0.63	1
RPTN	Amp_16p11.2	0.631	1
CHUK	ATXN3L	0.631	1
CHUK	Amp_19q12	0.631	1
CHUK	Del_3q26.31	0.631	1
ROS1	Del_1p33	0.631	1
RBPJ	Amp_16p11.2	0.631	1
RBBP7	Amp_16p11.2	0.631	1
SETD2	Del_15q21.1	0.631	1
NEXN	Amp_6p21.1	0.631	1
4p-Del	Amp_8q24.21	0.631	1
5q-Del	Amp_6p21.1	0.631	1
5q-Del	Del_3p26.3	0.631	1
Amp_2q33.1	Del_3p26.3	0.631	1
Amp_16p11.2	Del_8q11.1	0.631	1
ARID1A	Del_5q22.2	0.632	1
ARID1A	Del_14q11.2	0.632	1
C2orf29	Amp_8p11.21	0.632	1
PTEN	GMNN	0.632	1
ALDH1A3	Amp_8p11.21	0.632	1
Amp_8p11.21	Del_16p13.3	0.632	1
SMAD2	17q-Amp	0.633	1
PTCH1	NEXN	0.633	1
PTCH1	Amp_2q33.1	0.633	1
PTCH1	Amp_19q12	0.633	1
PTCH1	Del_3q26.31	0.633	1
ROS1	Del_15q11.2	0.633	1
MAP4K3	Del_12p13.1	0.633	1
2p-Amp	Del_8p22	0.633	1
2q-Amp	Del_8p22	0.633	1
6p-Amp	Del_8p22	0.633	1
WNT1	Del_21q21.1	0.634	1
THOC7	13q-Amp	0.634	1
NF1	Amp_10q22.3	0.634	1
CRIPAK	DDX26B	0.635	1
PIK3R1	Amp_2q33.1	0.635	1
GMNN	20q-Amp	0.635	1
TXNDC2	Amp_20q12	0.636	1
HIST1H1T	Amp_13q12.2	0.636	1
ACVR1B	ERBB2	0.637	1
ACVR1B	Amp_1q31.1	0.637	1
ACVR1B	Amp_17q24.1	0.637	1
CDH1	Amp_11p15.5	0.637	1
GGT1	ALPK2	0.637	1
SELPLG	Amp_8p11.23	0.637	1
MAPK6	Amp_8p11.23	0.637	1
FAM9A	Amp_11p15.5	0.637	1
MVK	Del_21q11.2	0.637	1
ERBB2	KDM6A	0.637	1
P2RY13	12q-Amp	0.637	1
NR1H3	9p-Amp	0.637	1
GRB2	Del_1p13.2	0.637	1
PCBP1	12q-Amp	0.637	1
PCBP1	Del_10q21.1	0.637	1
C2orf29	Amp_8p11.23	0.637	1
DCLK2	Del_10q21.1	0.637	1
FYN	12q-Amp	0.637	1
FYN	Del_10q21.1	0.637	1
GPATCH8	12q-Amp	0.637	1
BIRC3	12q-Amp	0.637	1
GMNN	7q-Amp	0.637	1
KDM6A	Amp_1q31.1	0.637	1
16q-Amp	9p-Amp	0.637	1
17p-Del	Amp_2q33.1	0.637	1
Amp_11p15.5	Del_2q22.1	0.637	1
Amp_17q24.1	Del_16q23.1	0.637	1
CRIPAK	7q-Amp	0.638	1
TXNDC2	Amp_8p11.21	0.638	1
CDH1	Del_19p13.3	0.638	1
ERBB2	Del_8p22	0.638	1
12p-Amp	Del_19p13.3	0.638	1
20p-Amp	Del_5q22.2	0.638	1
Amp_11p15.5	Del_6p25.3	0.638	1
Del_1p13.2	Del_19p13.3	0.638	1
FAM123B	ZFP36L2	0.639	1
FAM123B	Del_8q11.1	0.639	1
MLH1	16p-Amp	0.639	1
MLH1	Del_8q11.1	0.639	1
SELPLG	21q-Del	0.639	1
NF2	Del_5q22.2	0.639	1
C2orf29	21q-Del	0.639	1
SMAD4	Amp_20p11.21	0.639	1
MAP4K3	8p-Amp	0.639	1
APC	B2M	0.64	1
APC	RPTN	0.64	1
APC	16p-Amp	0.64	1
CRIPAK	21q-Del	0.64	1
ZFP36L2	8q-Amp	0.64	1
CDH1	22q-Del	0.64	1
RHOA	Amp_1q31.1	0.64	1
CHUK	Del_3p14.2	0.64	1
ERBB2	IFT57	0.64	1
IQCD	Amp_17q24.1	0.64	1
RB1	BIRC3	0.64	1
ZNF486	Amp_1q31.1	0.64	1
8q-Amp	Del_8q11.1	0.64	1
21q-Del	8p-Del	0.64	1
TXNDC2	Del_21q21.1	0.641	1
SMAD2	ASXL1	0.641	1
SMAD2	Amp_17q12	0.641	1
EGR1	Del_10q23.31	0.641	1
PLEKHF2	Del_10q23.31	0.641	1
ALPK2	Del_12p13.1	0.641	1
NLRC4	Del_10q23.31	0.641	1
PIK3R1	17p-Del	0.641	1
RB1	7p-Amp	0.641	1
TOP2B	Del_21q21.1	0.641	1
Amp_20p12.1	Del_10q23.31	0.641	1
OR4D10	Amp_12p13.33	0.642	1
NF2	PCBP1	0.642	1
NF2	BIRC3	0.642	1
NF2	16q-Amp	0.642	1
PRKDC	Amp_8p11.23	0.642	1
NR1H3	Del_4q35.1	0.642	1
7q-Amp	Del_10q25.2	0.643	1
FAM123B	Del_10q25.2	0.644	1
MAPK6	Amp_5p12	0.644	1
MGA	ERBB2	0.644	1
MGA	Amp_1q31.1	0.644	1
ALDH1A3	Amp_5p12	0.644	1
13q-Amp	Amp_10q22.3	0.644	1
Amp_1q31.1	Del_5q12.1	0.644	1
SOX9	Amp_12p13.33	0.645	1
ZFP36L2	Del_16q23.1	0.645	1
RPTN	Del_16q23.1	0.645	1
HLA-A	Del_16q23.1	0.645	1
HIST1H1T	4p-Del	0.645	1
20p-Del	4p-Del	0.645	1
Amp_12p13.33	Del_5q23.3	0.645	1
THOC7	MGA	0.646	1
THOC7	Del_5q12.1	0.646	1
RSPH3	Del_5q12.1	0.646	1
Amp_19q12	Del_1p36.11	0.646	1
Del_1p36.11	Del_3q26.31	0.646	1
BCOR	Del_22q13.32	0.647	1
RHOA	ATM	0.647	1
PTEN	2p-Amp	0.647	1
PTEN	6p-Amp	0.647	1
Amp_15q26.1	Del_18p11.31	0.647	1
TXNDC2	ATXN3L	0.648	1
TXNDC2	L1TD1	0.648	1
TXNDC2	Amp_19q12	0.648	1
BCOR	OR4D10	0.648	1
ATXN3L	Del_6q26	0.648	1
L1TD1	Del_6q26	0.648	1
TOP2B	5q-Del	0.648	1
TOP2B	Amp_2q33.1	0.648	1
TOP2B	Del_3q26.31	0.648	1
NEXN	Del_19p13.3	0.648	1
5q-Del	Del_6p25.3	0.648	1
5q-Del	Del_6q26	0.648	1
Amp_2q33.1	Del_6q26	0.648	1
Amp_2q33.1	Del_19p13.3	0.648	1
Amp_19q12	Del_6p25.3	0.648	1
Amp_20q13.12	Del_3q26.31	0.648	1
PCBP1	CDK12	0.649	1
SELPLG	22q-Del	0.65	1
SELPLG	Del_4p16.1	0.65	1
NF2	12q-Amp	0.65	1
CHUK	MAP4K3	0.65	1
C11orf30	17q-Amp	0.65	1
FYN	Del_15q22.33	0.65	1
IDH1	Del_3p26.3	0.65	1
17q-Amp	Del_3p26.3	0.65	1
9p-Amp	Del_4q35.1	0.65	1
FAM123B	6p-Amp	0.651	1
CDH1	Del_15q15.2	0.651	1
MLH1	2p-Amp	0.651	1
MLH1	2q-Amp	0.651	1
MLH1	6p-Amp	0.651	1
SMAD2	PTEN	0.651	1
RLIM	Amp_13q12.2	0.651	1
DDX26B	Del_21q21.1	0.651	1
PTEN	Del_12p13.1	0.651	1
ATM	Del_3p26.3	0.651	1
Amp_1q31.1	Del_18q21.2	0.651	1
TXNDC2	Del_4q22.1	0.652	1
MGA	8q-Amp	0.652	1
RLIM	Amp_16p11.2	0.652	1
MPHOSPH10	Amp_16p11.2	0.652	1
C14orf184	Del_4q35.1	0.652	1
Amp_5p12	Del_15q11.2	0.652	1
CRIPAK	22q-Del	0.653	1
CRIPAK	Del_4p16.1	0.653	1
RNF43	SMAD2	0.653	1
FMN2	12p-Amp	0.653	1
SETD2	Amp_6p21.1	0.653	1
SLC12A6	Amp_8p11.23	0.653	1
PRPS1	21q-Del	0.653	1
PRPS1	Del_5q21.2	0.653	1
HIST1H1T	8p-Amp	0.653	1
GMNN	Amp_20q11.21	0.653	1
APC	Amp_16p11.2	0.654	1
RBPJ	13q-Amp	0.654	1
HIST1H1T	17p-Del	0.654	1
CDH1	7p-Amp	0.655	1
GGT1	RB1	0.655	1
GRB2	Del_3p14.2	0.655	1
NLRC4	7p-Amp	0.655	1
Del_2q22.1	Del_3p14.2	0.655	1
Del_3q26.31	Del_15q15.2	0.655	1
SMAD4	Amp_8q24.21	0.656	1
SETD2	Del_10q25.2	0.656	1
Del_16q23.1	Del_18q22.1	0.656	1
CRIPAK	ERBB2	0.657	1
RHOA	Del_15q21.1	0.657	1
ASXL1	Del_15q22.33	0.657	1
PRRG1	Del_8p22	0.657	1
PIK3R1	4q-Del	0.657	1
RLIM	Amp_8q24.21	0.657	1
RLIM	Amp_13q22.1	0.657	1
ZNF486	Del_14q11.2	0.657	1
CREBBP	Del_5q22.2	0.657	1
Amp_8q24.21	Del_6q26	0.657	1
CRIPAK	RPTN	0.658	1
CRIPAK	RBBP7	0.658	1
CRIPAK	GMPS	0.658	1
SELPLG	BCL9	0.658	1
FBXW7	Amp_2q33.1	0.658	1
BCL9	C2orf29	0.658	1
NLRC4	Del_16p13.3	0.658	1
C2orf29	BCORL1	0.658	1
C2orf29	SLC12A6	0.658	1
16p-Amp	Del_5q22.2	0.658	1
Amp_8p11.21	Del_10q23.31	0.658	1
Del_5q22.2	Del_8q11.1	0.658	1
NR1H3	Del_22q13.32	0.659	1
PTCH1	Del_5q23.3	0.659	1
PIK3R1	Del_15q11.2	0.659	1
BIRC3	Del_22q13.32	0.659	1
16q-Amp	Del_22q13.32	0.659	1
15q-Del	Amp_5p12	0.659	1
SOX9	EGR1	0.66	1
SOX9	ST3GAL6	0.66	1
SOX9	PLEKHF2	0.66	1
RPTN	17p-Del	0.66	1
THOC7	CTNNB1	0.66	1
DIP2B	Del_10q25.2	0.66	1
RSPH3	CTNNB1	0.66	1
VCX2	Del_5q23.3	0.66	1
LARP4B	Del_10q25.2	0.66	1
PTGDR	22q-Del	0.66	1
PTGDR	Del_4p16.1	0.66	1
22q-Del	Del_7q31.1	0.66	1
Amp_1q31.1	Del_3p14.2	0.66	1
Del_2p12	Del_14q11.2	0.66	1
Del_7q31.1	Del_18q12.2	0.66	1
APC	CDK12	0.661	1
OR4D10	12q-Amp	0.661	1
DDX26B	9p-Amp	0.661	1
DDX26B	Del_10q21.1	0.661	1
PTEN	8q-Amp	0.661	1
PTEN	Del_2q22.1	0.661	1
ZNF486	8q-Amp	0.661	1
12p-Amp	Del_8p22	0.661	1
Amp_5p12	Amp_11p15.5	0.661	1
Amp_5p12	Del_1p13.2	0.661	1
Amp_16p11.2	Del_10q23.31	0.662	1
EGR1	Amp_8q24.21	0.663	1
FBXW7	ERBB2	0.663	1
ATXN3L	Amp_5p12	0.663	1
ST3GAL6	Amp_8q24.21	0.663	1
PLEKHF2	Amp_8q24.21	0.663	1
PCBP1	Amp_13q12.13	0.663	1
RB1	Del_10q21.1	0.663	1
C14orf184	Del_22q13.32	0.663	1
NEXN	13q-Amp	0.663	1
Amp_2q33.1	Amp_5p12	0.663	1
CDH1	Del_5q12.1	0.664	1
BCOR	21q-Del	0.664	1
NF2	4p-Del	0.664	1
THOC7	SETD2	0.664	1
DIP2B	Del_5q21.2	0.664	1
RSPH3	SETD2	0.664	1
C2orf29	Del_15q11.2	0.664	1
Amp_15q26.1	Del_5q22.2	0.664	1
Del_15q11.2	Del_16p13.3	0.664	1
CDH1	Del_1p33	0.665	1
WNT1	SMAD4	0.665	1
RHOA	Amp_8p11.23	0.665	1
EGR1	FBXW7	0.665	1
IQCD	Amp_8p11.23	0.665	1
ROS1	8p-Amp	0.665	1
SMAD4	C14orf184	0.665	1
C14orf184	18q-Del	0.665	1
Del_3q26.31	Del_15q21.1	0.665	1
TXNDC2	IDH1	0.666	1
MLH1	Amp_16p11.2	0.666	1
ATXN3L	Amp_20p12.1	0.666	1
ZBTB20	Del_6p25.3	0.666	1
MPHOSPH10	Del_16q23.1	0.666	1
MAP4K3	Del_19p13.3	0.666	1
17q-Amp	Del_6p25.3	0.666	1
CDH1	Del_10q21.1	0.667	1
FMN2	RBPJ	0.667	1
OR4D10	Amp_20p12.1	0.667	1
CREBBP	22q-Del	0.667	1
CREBBP	Del_4p16.1	0.667	1
4q-Del	Amp_8q24.21	0.667	1
TXNDC2	7q-Amp	0.668	1
RHOA	Amp_13q12.2	0.668	1
ATXN3L	Del_5q21.2	0.668	1
MVK	ERBB2	0.668	1
MVK	Amp_1q31.1	0.668	1
PRRG1	Amp_17q24.1	0.668	1
PIK3R1	Del_5q21.2	0.668	1
L1TD1	21q-Del	0.668	1
NEXN	Del_5q21.2	0.668	1
7q-Amp	Del_6q26	0.668	1
21q-Del	Amp_19q12	0.668	1
4q-Del	Amp_12p13.33	0.668	1
Amp_10q22.3	Amp_17q24.1	0.668	1
Del_3q26.31	Del_5q21.2	0.668	1
TXNDC2	18q-Del	0.669	1
GGT1	PIK3R1	0.669	1
TPRKB	PIK3R1	0.669	1
BCL9	Del_5q23.3	0.669	1
PIK3R1	HIST1H1T	0.669	1
RLIM	7q-Amp	0.669	1
BCORL1	Del_5q23.3	0.669	1
PLEKHF2	4q-Del	0.67	1
PLEKHF2	Del_1p13.2	0.67	1
VCX2	4q-Del	0.67	1
VCX2	Amp_11p15.5	0.67	1
8q-Amp	Del_10q25.2	0.67	1
FAM123B	1p-Del	0.671	1
ZFP36L2	DIP2B	0.671	1
ZFP36L2	Del_17q24.3	0.671	1
CDH1	Del_15q21.1	0.671	1
BCOR	RPTN	0.671	1
BCOR	HLA-A	0.671	1
BCOR	16p-Amp	0.671	1
BCOR	Del_8q11.1	0.671	1
FMN2	2p-Amp	0.671	1
FMN2	2q-Amp	0.671	1
RHOA	Del_10q23.31	0.671	1
RPTN	DIP2B	0.671	1
RPTN	Del_17q24.3	0.671	1
ST3GAL6	Amp_20p12.1	0.671	1
DIP2B	16p-Amp	0.671	1
IFT57	Del_10q23.31	0.671	1
MPHOSPH10	20p-Amp	0.671	1
VCX2	Amp_20p12.1	0.671	1
HLA-A	Del_17q24.3	0.671	1
LARP4B	16p-Amp	0.671	1
PTGDR	Amp_8q24.21	0.671	1
HIST1H1T	Amp_13q12.13	0.671	1
ZNF486	Del_10q23.31	0.671	1
Amp_8p11.21	Del_15q22.33	0.671	1
THOC7	ALPK2	0.672	1
THOC7	ASXL1	0.672	1
NF1	Amp_13q12.2	0.672	1
NR1H3	20p-Amp	0.672	1
ASXL1	GRB2	0.672	1
ASXL1	Del_2q22.1	0.672	1
20q-Amp	Del_3q26.31	0.672	1
TXNDC2	Del_8p23.2	0.673	1
RHOA	Amp_13q22.1	0.673	1
PRKDC	8p-Del	0.673	1
NF2	Del_19p13.3	0.674	1
MGA	Amp_5p12	0.674	1
VCX2	20p-Amp	0.674	1
VCX2	Del_8p23.2	0.674	1
PTEN	Amp_10q22.3	0.674	1
CDK12	Del_15q11.2	0.674	1
MLH1	22q-Del	0.675	1
MLH1	Del_4p16.1	0.675	1
WNT1	Del_21q11.2	0.675	1
PTCH1	MAP4K3	0.675	1
PTCH1	IDH1	0.675	1
PTCH1	17q-Amp	0.675	1
FYN	Del_21q11.2	0.675	1
PTGDR	20q-Amp	0.675	1
BIRC3	Del_21q11.2	0.675	1
GMNN	Amp_20q12	0.675	1
16q-Amp	Del_21q11.2	0.675	1
ZFP36L2	Amp_12p13.33	0.676	1
B2M	Amp_12p13.33	0.676	1
EGR1	7q-Amp	0.676	1
PRKDC	Amp_6p21.1	0.676	1
RPTN	15q-Del	0.676	1
ATXN3L	Amp_8p11.21	0.676	1
ERBB2	Del_17q24.3	0.676	1
DIP2B	Amp_17q24.1	0.676	1
PIK3R1	Amp_20p11.21	0.676	1
PIK3R1	Del_5q12.1	0.676	1
RBPJ	Amp_12p13.33	0.676	1
HLA-A	Amp_12p13.33	0.676	1
LARP4B	Amp_1q31.1	0.676	1
GMNN	Amp_13q12.2	0.676	1
Amp_8q24.21	Del_4p16.1	0.676	1
Amp_17q24.1	Del_17q24.3	0.676	1
ARID1A	Amp_12p13.33	0.677	1
BCOR	22q-Del	0.677	1
FBXW7	6p-Amp	0.677	1
ATXN3L	Del_8p22	0.677	1
P2RY13	Amp_8p11.21	0.677	1
DIP2B	Del_4p16.1	0.677	1
DCLK2	Amp_8p11.21	0.677	1
GPATCH8	Amp_8p11.21	0.677	1
SETD2	Del_6p25.3	0.677	1
IDH1	Amp_13q12.2	0.677	1
7q-Amp	Amp_11p15.5	0.677	1
TXNDC2	18p-Del	0.678	1
TXNDC2	Amp_20p11.21	0.678	1
NF2	Amp_12p13.33	0.678	1
CHUK	4p-Del	0.678	1
BCL9	5q-Del	0.678	1
BCL9	Amp_19q12	0.678	1
BCL9	Del_3q26.31	0.678	1
NLRC4	Del_3q26.31	0.678	1
PRRG1	Del_1p33	0.678	1
C14orf184	Amp_20q11.21	0.678	1
BMPR2	12q-Amp	0.678	1
SLC12A6	Del_3q26.31	0.678	1
9p-Amp	Del_10q25.2	0.678	1
Amp_12p13.33	Del_4q35.1	0.678	1
ACVR1B	PTEN	0.679	1
EGR1	Del_5q12.1	0.679	1
ATXN3L	Del_4p16.1	0.679	1
MGA	PLEKHF2	0.679	1
GMNN	Amp_13q22.1	0.679	1
Amp_19q12	Del_4p16.1	0.679	1
APC	Amp_12p13.33	0.68	1
SMAD4	Del_15q22.33	0.68	1
SETD2	8p-Amp	0.68	1
CTNNB1	Del_15q15.2	0.68	1
17q-Amp	Del_1p36.11	0.68	1
RNF43	THOC7	0.681	1
CDH1	Del_16p13.3	0.681	1
ALPK2	4p-Del	0.681	1
GRB2	SMAD4	0.681	1
PRPS1	20p-Amp	0.681	1
PTGDR	20p-Amp	0.681	1
IDH1	Amp_5p12	0.681	1
20p-Amp	Del_7q31.1	0.681	1
Amp_13q22.1	Del_3p14.2	0.681	1
Del_7q31.1	Del_8p23.2	0.681	1
ACVR1B	Del_1p36.11	0.682	1
Amp_1q31.1	Del_8p23.2	0.682	1
Amp_10q22.3	Amp_20q12	0.682	1
B2M	12q-Amp	0.683	1
B2M	Del_10q21.1	0.683	1
MLH1	Amp_8p11.21	0.683	1
SMAD2	Del_6p25.3	0.683	1
RPTN	12q-Amp	0.683	1
RPTN	9p-Amp	0.683	1
RPTN	Del_10q21.1	0.683	1
BCL9	12p-Amp	0.683	1
P2RY13	Del_10q25.2	0.683	1
NR1H3	BMPR2	0.683	1
NR1H3	Del_10q25.2	0.683	1
NLRC4	Amp_11p15.5	0.683	1
PCBP1	BMPR2	0.683	1
RBPJ	Del_10q21.1	0.683	1
RBBP7	12q-Amp	0.683	1
TOP2B	Del_12p13.1	0.683	1
HLA-A	Del_10q21.1	0.683	1
FYN	Del_10q25.2	0.683	1
BCORL1	4q-Del	0.683	1
SLC12A6	4q-Del	0.683	1
GMPS	12q-Amp	0.683	1
BIRC3	Del_10q25.2	0.683	1
12p-Amp	Del_10q23.31	0.683	1
16p-Amp	9p-Amp	0.683	1
9p-Amp	Del_8q11.1	0.683	1
Amp_15q26.1	Del_21q21.1	0.683	1
NF1	PCBP1	0.684	1
NF1	Amp_2q33.1	0.684	1
NF1	Del_3q26.31	0.684	1
CHUK	Amp_6p21.1	0.684	1
CHUK	Del_3p26.3	0.684	1
PTCH1	Del_4q35.1	0.684	1
HIST1H1T	Amp_8p11.21	0.684	1
Amp_8p11.21	Del_15q15.2	0.684	1
B2M	Del_21q21.1	0.685	1
TXNDC2	Del_15q22.33	0.685	1
NF2	8p-Amp	0.685	1
ACVR1B	SELPLG	0.686	1
ACVR1B	C2orf29	0.686	1
SELPLG	KDM6A	0.686	1
SELPLG	Del_16q23.1	0.686	1
RB1	Del_1p36.11	0.686	1
FKBP9	Del_16q23.1	0.686	1
ALDH1A3	KDM6A	0.686	1
ALDH1A3	Del_16q23.1	0.686	1
BCORL1	15q-Del	0.686	1
KDM6A	Del_16p13.3	0.686	1
EGR1	Del_3p14.2	0.687	1
ST3GAL6	Del_3p14.2	0.687	1
PLEKHF2	Del_3p14.2	0.687	1
PLAGL2	Amp_8q24.21	0.687	1
PTEN	16p-Amp	0.687	1
17p-Del	Amp_10q22.3	0.687	1
18p-Del	Amp_15q26.1	0.687	1
SMAD2	PIK3R1	0.688	1
PTCH1	12p-Amp	0.688	1
PIK3R1	Del_12p13.1	0.688	1
RLIM	7p-Amp	0.688	1
MPHOSPH10	8q-Amp	0.688	1
CDK12	Del_15q22.33	0.688	1
KDM6A	8p-Del	0.688	1
7p-Amp	1p-Del	0.688	1
APC	FAM9A	0.689	1
APC	Del_2q22.1	0.689	1
CDH1	Del_3p14.2	0.689	1
MLH1	Del_1p33	0.689	1
FAM9A	8p-Amp	0.689	1
THOC7	Del_18q22.1	0.689	1
RSPH3	8p-Amp	0.689	1
ROS1	Amp_19q12	0.689	1
ROS1	Del_3q26.31	0.689	1
6p-Amp	Del_4q22.1	0.689	1
8p-Amp	Del_2q22.1	0.689	1
Amp_15q26.1	Del_4q22.1	0.689	1
Amp_17q12	Del_6p25.3	0.689	1
NF1	HIST1H1T	0.69	1
CHUK	8p-Amp	0.69	1
IQCD	Del_5q23.3	0.69	1
ZNF486	Del_5q23.3	0.69	1
8p-Amp	Del_15q15.2	0.69	1
Amp_16p11.2	Del_5q23.3	0.69	1
FAM123B	Del_16q23.1	0.691	1
CDH1	Amp_8p11.23	0.691	1
MLH1	Del_16q23.1	0.691	1
FMN2	Del_1p36.11	0.691	1
NF1	22q-Del	0.691	1
PRRG1	Del_15q15.2	0.691	1
RB1	Del_1p33	0.691	1
PTEN	12q-Amp	0.691	1
BCOR	RLIM	0.692	1
GGT1	Del_5q21.2	0.692	1
NEXN	Amp_16p11.2	0.692	1
HIST1H1T	Del_5q21.2	0.692	1
12p-Amp	Del_1p36.11	0.692	1
1p-Del	Del_17q24.3	0.692	1
5q-Del	Amp_16p11.2	0.692	1
Amp_2q33.1	Amp_16p11.2	0.692	1
STARD3NL	ERBB2	0.693	1
STARD3NL	Amp_1q31.1	0.693	1
NF1	13q-Amp	0.693	1
P2RY13	Amp_17q24.1	0.693	1
BIRC3	Amp_1q31.1	0.693	1
BIRC3	Amp_17q24.1	0.693	1
TP53	SLC26A8	0.694	1
FAM123B	Del_7q31.1	0.694	1
ZFP36L2	Del_4q22.1	0.694	1
RPTN	Del_4q22.1	0.694	1
Amp_1q31.1	Del_10q21.1	0.694	1
Amp_17q24.1	Del_10q21.1	0.694	1
PIK3R1	Del_4q22.1	0.695	1
RBPJ	CDK12	0.695	1
CDK12	16p-Amp	0.695	1
CDK12	Del_8q11.1	0.695	1
PTGDR	8q-Amp	0.695	1
17q-Amp	21q-Del	0.695	1
Amp_8p11.21	Del_22q13.32	0.695	1
PLEKHF2	SETD2	0.696	1
NLRC4	IDH1	0.696	1
NLRC4	17q-Amp	0.696	1
SMAD4	Del_14q11.2	0.696	1
PTEN	Del_5q21.2	0.696	1
BCORL1	IDH1	0.696	1
SELPLG	18p-Del	0.697	1
MAPK6	Amp_20p11.21	0.697	1
PCBP1	SMAD4	0.697	1
RLIM	Amp_13q12.13	0.697	1
C2orf29	18p-Del	0.697	1
BCORL1	Del_21q21.1	0.697	1
ASXL1	8p-Amp	0.698	1
PTEN	Amp_2q33.1	0.698	1
PTGDR	Amp_20q11.21	0.698	1
12q-Amp	Del_21q11.2	0.698	1
Amp_5p12	Del_12p13.1	0.698	1
Amp_19q12	Del_18p11.31	0.698	1
RHOA	12p-Amp	0.699	1
RHOA	Amp_11p15.5	0.699	1
PRKDC	8q-Amp	0.699	1
IQCD	4q-Del	0.699	1
PRRG1	Del_15q21.1	0.699	1
IFT57	12p-Amp	0.699	1
HIST1H1T	22q-Del	0.699	1
ZNF486	12p-Amp	0.699	1
Amp_10q22.3	Del_14q11.2	0.699	1
CRIPAK	SELPLG	0.7	1
CRIPAK	MAPK6	0.7	1
CRIPAK	C2orf29	0.7	1
CRIPAK	FKBP9	0.7	1
TXNDC2	Del_3p26.3	0.7	1
CDH1	ZNF486	0.7	1
MLH1	Del_16p13.3	0.7	1
CHUK	Del_6p25.3	0.7	1
CHUK	Del_19p13.3	0.7	1
ATXN3L	Del_15q11.2	0.7	1
C11orf30	Del_6p25.3	0.7	1
C11orf30	Del_19p13.3	0.7	1
SMAD4	Del_3p14.2	0.7	1
GMNN	Amp_13q12.13	0.7	1
20p-Amp	22q-Del	0.7	1
8p-Amp	Del_15q22.33	0.7	1
RNF43	Del_6p25.3	0.701	1
FMN2	Amp_16p11.2	0.701	1
NF2	6p-Amp	0.701	1
NF2	20p-Del	0.701	1
NF2	Amp_15q26.1	0.701	1
C14orf184	Del_18q12.2	0.701	1
ATM	Del_6p25.3	0.701	1
2p-Amp	Del_4q35.1	0.701	1
2q-Amp	Del_4q35.1	0.701	1
6p-Amp	Del_4q35.1	0.701	1
7q-Amp	14q-Del	0.701	1
7q-Amp	Del_1p33	0.701	1
4p-Del	Del_6p25.3	0.701	1
Amp_13q12.2	Del_6p25.3	0.701	1
ARID1A	20p-Del	0.702	1
CRIPAK	Del_10q23.31	0.702	1
TXNDC2	20q-Amp	0.702	1
NF2	Amp_5p12	0.702	1
C14orf184	Amp_20q12	0.702	1
Amp_19q12	Del_18q22.1	0.702	1
RB1	Amp_16p11.2	0.703	1
Amp_16p11.2	Del_1p13.2	0.703	1
CDH1	BCORL1	0.704	1
EGR1	Amp_17q12	0.704	1
THOC7	PIK3R1	0.704	1
THOC7	Del_18q21.2	0.704	1
ST3GAL6	ASXL1	0.704	1
NR1H3	Del_1p33	0.704	1
GRB2	PIK3R1	0.704	1
PLAGL2	7q-Amp	0.704	1
RLIM	9p-Amp	0.704	1
DCLK2	Del_1p33	0.704	1
12p-Amp	Del_5q21.2	0.704	1
7q-Amp	Del_2p12	0.704	1
ACVR1B	ATXN3L	0.705	1
ACVR1B	Amp_19q12	0.705	1
ACVR1B	Del_3q26.31	0.705	1
ATXN3L	Del_16q23.1	0.705	1
L1TD1	Del_16q23.1	0.705	1
NEXN	Del_16q23.1	0.705	1
KDM6A	Amp_2q33.1	0.705	1
17q-Amp	22q-Del	0.705	1
Del_3q26.31	Del_16q23.1	0.705	1
RNF43	Amp_1q31.1	0.706	1
MAPK6	7q-Amp	0.706	1
ERBB2	4p-Del	0.706	1
C2orf29	7q-Amp	0.706	1
ALDH1A3	7q-Amp	0.706	1
4p-Del	Amp_17q24.1	0.706	1
8p-Del	Del_3p26.3	0.706	1
Amp_8p11.21	Del_14q11.2	0.706	1
Amp_8p11.21	Del_15q21.1	0.706	1
ZFP36L2	20p-Del	0.707	1
FAM9A	Amp_20p11.21	0.707	1
DDX26B	Del_10q25.2	0.707	1
RBPJ	20p-Del	0.707	1
C14orf184	Del_1p36.11	0.707	1
CREBBP	2p-Amp	0.707	1
CREBBP	6p-Amp	0.707	1
CREBBP	Amp_15q26.1	0.707	1
GMNN	Amp_20q13.12	0.707	1
16p-Amp	20p-Del	0.707	1
Amp_8p11.23	Del_4p16.1	0.707	1
APC	ARID1A	0.708	1
APC	ALPK2	0.708	1
THOC7	RB1	0.708	1
IQCD	Del_5q12.1	0.708	1
PTCH1	Del_2q22.1	0.708	1
RLIM	Amp_12p13.33	0.708	1
SMAD4	Amp_13q12.13	0.708	1
RB1	Del_2q22.1	0.708	1
BCORL1	Del_4q22.1	0.708	1
CDK12	21q-Del	0.708	1
KDM6A	Amp_8q24.21	0.708	1
Amp_8q24.21	Del_16q23.1	0.708	1
CDH1	Amp_12p13.33	0.709	1
ALPK2	Amp_8q24.21	0.709	1
SETD2	8p-Del	0.709	1
20p-Amp	Amp_12p13.33	0.709	1
9p-Amp	14q-Del	0.709	1
CRIPAK	Del_1p36.11	0.71	1
NF1	Del_22q13.32	0.71	1
FBXW7	7p-Amp	0.71	1
ASXL1	Del_1p33	0.71	1
KDM6A	Del_5q23.3	0.71	1
SOX9	Amp_20p12.1	0.711	1
NF2	16p-Amp	0.711	1
RPTN	Del_4q35.1	0.711	1
FBXW7	16p-Amp	0.711	1
CHUK	7p-Amp	0.711	1
CHUK	8q-Amp	0.711	1
ASXL1	Amp_5p12	0.711	1
DDX26B	Del_21q11.2	0.711	1
RB1	Del_8p22	0.711	1
CDK12	Amp_1q31.1	0.711	1
16p-Amp	Del_4q35.1	0.711	1
RNF43	VCX2	0.712	1
BCOR	SELPLG	0.712	1
WNT1	Del_15q15.2	0.712	1
MAPK6	Del_17q24.3	0.712	1
RPTN	Del_17p12	0.712	1
PLEKHF2	4p-Del	0.712	1
ASXL1	Del_15q11.2	0.712	1
DIP2B	SMAD4	0.712	1
PIK3R1	Del_3p26.3	0.712	1
ROS1	9p-Amp	0.712	1
VCX2	13q-Amp	0.712	1
VCX2	4p-Del	0.712	1
SMAD4	Del_16p13.3	0.712	1
FKBP9	Del_17q24.3	0.712	1
LARP4B	Del_16p13.3	0.712	1
IDH1	Amp_20p12.1	0.712	1
6p-Amp	Del_22q13.32	0.712	1
15q-Del	Amp_16p11.2	0.712	1
Amp_5p12	Del_15q22.33	0.712	1
Amp_8q24.21	Del_12p13.1	0.712	1
SMAD2	PTCH1	0.713	1
SMAD2	BCORL1	0.713	1
SMAD2	SLC12A6	0.713	1
STARD3NL	13q-Amp	0.713	1
PCBP1	13q-Amp	0.713	1
ROS1	Amp_8q24.21	0.713	1
TOP2B	8p-Amp	0.713	1
FYN	13q-Amp	0.713	1
SLC12A6	Del_12p13.1	0.713	1
PRPS1	13q-Amp	0.713	1
GMNN	Amp_8p11.21	0.713	1
13q-Amp	Del_7q31.1	0.713	1
8p-Amp	Del_6q26	0.713	1
Amp_8p11.21	Del_4q22.1	0.713	1
TP53	OR4D10	0.714	1
HIST1H1T	18q-Del	0.714	1
CTNNB1	Del_19p13.3	0.714	1
7p-Amp	Amp_10q22.3	0.714	1
Amp_8p11.21	Del_10q21.1	0.714	1
Del_5q22.2	Del_16q23.1	0.714	1
Del_7q31.1	Del_18q22.1	0.714	1
CRIPAK	MLH1	0.715	1
SOX9	ROS1	0.715	1
NF1	Amp_13q12.13	0.715	1
CHUK	Amp_5p12	0.715	1
ROS1	Del_5q23.3	0.715	1
SMAD4	8p-Amp	0.715	1
TOP2B	Del_6p25.3	0.715	1
TOP2B	Del_19p13.3	0.715	1
TOP2B	Del_21q11.2	0.715	1
MAP4K3	Amp_8p11.21	0.715	1
14q-Del	Amp_17q12	0.715	1
Amp_5p12	Del_3p26.3	0.715	1
SMAD2	Amp_20p11.21	0.716	1
ROS1	17q-Amp	0.716	1
ALDH1A3	Amp_8q24.21	0.716	1
CDK12	8q-Amp	0.716	1
20p-Amp	Del_22q13.32	0.716	1
Amp_16p11.2	Del_5q12.1	0.716	1
Amp_20p11.21	Del_12p13.1	0.716	1
SOX9	Amp_11p15.5	0.717	1
CDH1	5q-Del	0.717	1
WNT1	Del_15q21.1	0.717	1
ERBB2	DDX26B	0.717	1
DIP2B	Amp_20p11.21	0.717	1
IFT57	Del_3p14.2	0.717	1
RLIM	13q-Amp	0.717	1
C2orf29	Amp_13q12.2	0.717	1
DDX26B	Amp_1q31.1	0.717	1
13q-Amp	1p-Del	0.717	1
Amp_10q22.3	Del_5q23.3	0.717	1
Amp_20p12.1	Del_8q11.1	0.717	1
CRIPAK	L1TD1	0.718	1
CRIPAK	5q-Del	0.718	1
CRIPAK	Amp_2q33.1	0.718	1
PRKDC	2p-Amp	0.718	1
PRKDC	2q-Amp	0.718	1
TP53	Del_6q26	0.719	1
SELPLG	Del_5q22.2	0.719	1
RPTN	Del_15q22.33	0.719	1
C2orf29	Del_5q22.2	0.719	1
ALDH1A3	Del_5q22.2	0.719	1
CTNNB1	Del_22q13.32	0.719	1
12p-Amp	Del_18q22.1	0.719	1
RHOA	7q-Amp	0.72	1
IQCD	7q-Amp	0.72	1
IFT57	7q-Amp	0.72	1
VCX2	8p-Amp	0.72	1
PRPS1	15q-Del	0.72	1
PTGDR	15q-Del	0.72	1
15q-Del	Amp_1q31.1	0.72	1
Amp_12p13.33	Amp_17q24.1	0.72	1
ASXL1	Amp_8p11.21	0.721	1
13q-Amp	Del_2p12	0.721	1
WNT1	Amp_8p11.23	0.722	1
STARD3NL	Del_1p36.11	0.722	1
FBXW7	IFT57	0.722	1
PLEKHF2	Del_8p22	0.722	1
NR1H3	Del_1p36.11	0.722	1
PCBP1	Del_1p36.11	0.722	1
VCX2	Del_8p22	0.722	1
RB1	Del_8p23.2	0.722	1
FYN	Del_1p36.11	0.722	1
18q-Del	Amp_19q12	0.722	1
18q-Del	Del_3q26.31	0.722	1
Del_3q26.31	Del_18q21.2	0.722	1
ACVR1B	IDH1	0.723	1
FMN2	Del_14q11.2	0.723	1
SELPLG	Amp_13q22.1	0.723	1
MGA	21q-Del	0.723	1
ZBTB20	KDM6A	0.723	1
P2RY13	Del_10q23.31	0.723	1
NR1H3	Del_10q23.31	0.723	1
PCBP1	Del_10q23.31	0.723	1
MAP4K3	Del_16q23.1	0.723	1
CDK12	Del_21q11.2	0.723	1
BIRC3	Del_10q23.31	0.723	1
IDH1	Del_16q23.1	0.723	1
16q-Amp	Del_10q23.31	0.723	1
6p-Amp	Del_21q11.2	0.723	1
Amp_15q26.1	Del_21q11.2	0.723	1
Amp_16p11.2	Del_21q21.1	0.723	1
APC	LARP4B	0.724	1
APC	Amp_2q33.1	0.724	1
SELPLG	12q-Amp	0.724	1
SELPLG	9p-Amp	0.724	1
SELPLG	Del_10q21.1	0.724	1
MAPK6	9p-Amp	0.724	1
C2orf29	9p-Amp	0.724	1
SLC26A8	Del_10q21.1	0.724	1
ALDH1A3	9p-Amp	0.724	1
KDM6A	Del_8p23.2	0.724	1
9p-Amp	Del_8p23.2	0.724	1
9p-Amp	Del_16p13.3	0.724	1
Amp_17q24.1	Del_15q15.2	0.724	1
Del_8p23.2	Del_16q23.1	0.724	1
FMN2	Del_16q23.1	0.725	1
IDH1	Amp_13q12.13	0.725	1
8q-Amp	Del_4p16.1	0.725	1
Amp_10q22.3	Amp_20p11.21	0.725	1
SMAD2	20p-Amp	0.726	1
THOC7	Del_5q21.2	0.726	1
NF1	Amp_17q24.1	0.726	1
MVK	12p-Amp	0.726	1
PRRG1	4q-Del	0.726	1
PRRG1	Del_1p13.2	0.726	1
RSPH3	21q-Del	0.726	1
RSPH3	Del_5q21.2	0.726	1
PRPS1	Amp_20q12	0.726	1
PRPS1	Del_21q21.1	0.726	1
PTGDR	Amp_20q12	0.726	1
12p-Amp	Amp_10q22.3	0.726	1
13q-Amp	Del_6q26	0.726	1
20p-Amp	Del_12p13.1	0.726	1
ARID1A	Amp_10q22.3	0.727	1
SMAD2	Amp_16p11.2	0.727	1
THOC7	Amp_13q22.1	0.727	1
PRRG1	Del_15q11.2	0.727	1
DDX26B	Del_1p33	0.727	1
RBPJ	Del_22q13.32	0.727	1
RBBP7	Del_22q13.32	0.727	1
RB1	20p-Del	0.727	1
HLA-A	Del_22q13.32	0.727	1
7q-Amp	Del_3p14.2	0.727	1
Del_7q31.1	Del_18q21.2	0.727	1
ARID1A	21q-Del	0.728	1
FAM123B	ATXN3L	0.728	1
FAM123B	8p-Amp	0.728	1
FAM123B	Amp_2q33.1	0.728	1
MLH1	Amp_2q33.1	0.728	1
FMN2	SELPLG	0.728	1
FMN2	ALDH1A3	0.728	1
FMN2	Del_16p13.3	0.728	1
ERBB2	20p-Del	0.728	1
PTCH1	16p-Amp	0.728	1
ROS1	Amp_8p11.23	0.728	1
20p-Del	Amp_1q31.1	0.728	1
20p-Del	Amp_17q24.1	0.728	1
APC	GPATCH8	0.729	1
APC	16q-Amp	0.729	1
B2M	Del_10q25.2	0.729	1
FMN2	Del_1p33	0.729	1
SELPLG	20p-Amp	0.729	1
SELPLG	Del_8p23.2	0.729	1
PRKDC	8p-Amp	0.729	1
RPTN	BMPR2	0.729	1
RPTN	Del_10q25.2	0.729	1
NF1	Del_5q23.3	0.729	1
NLRC4	Amp_6p21.1	0.729	1
C2orf29	Del_8p23.2	0.729	1
HLA-A	Del_10q25.2	0.729	1
BMPR2	Del_8q11.1	0.729	1
FYN	Del_15q15.2	0.729	1
BCORL1	Amp_6p21.1	0.729	1
SLC12A6	Amp_6p21.1	0.729	1
SLC12A6	Del_3p26.3	0.729	1
16p-Amp	Del_10q25.2	0.729	1
16q-Amp	Del_15q15.2	0.729	1
20p-Amp	Del_16p13.3	0.729	1
14q-Del	Amp_15q26.1	0.729	1
Amp_8p11.23	Del_15q22.33	0.729	1
SMAD2	Del_4p16.1	0.73	1
SETD2	Del_10q23.31	0.73	1
ATM	Del_16q23.1	0.73	1
Amp_5p12	Del_6p25.3	0.73	1
ATXN3L	Del_17q24.3	0.731	1
DIP2B	Amp_19q12	0.731	1
MPHOSPH10	8p-Del	0.731	1
LARP4B	Amp_19q12	0.731	1
Amp_2q33.1	Del_17q24.3	0.731	1
IQCD	Amp_8q24.21	0.732	1
NLRC4	7q-Amp	0.732	1
PTGDR	Del_4q22.1	0.732	1
ZNF486	Amp_8q24.21	0.732	1
CREBBP	Del_4q22.1	0.732	1
8q-Amp	Del_16p13.3	0.732	1
Amp_1q31.1	Del_21q21.1	0.732	1
FAM123B	GGT1	0.733	1
FAM123B	TPRKB	0.733	1
SOX9	Del_5q12.1	0.733	1
CDH1	Amp_8p11.21	0.733	1
MLH1	TPRKB	0.733	1
MLH1	HIST1H1T	0.733	1
RHOA	ALPK2	0.733	1
RHOA	ASXL1	0.733	1
THOC7	22q-Del	0.733	1
NF1	Amp_17q12	0.733	1
IQCD	Amp_17q12	0.733	1
GRB2	Del_4p16.1	0.733	1
PIK3R1	Del_15q15.2	0.733	1
RSPH3	22q-Del	0.733	1
ATM	8q-Amp	0.733	1
12p-Amp	4q-Del	0.733	1
22q-Del	Del_2q22.1	0.733	1
Del_2q22.1	Del_4p16.1	0.733	1
FMN2	Amp_12p13.33	0.734	1
OR4D10	20p-Amp	0.734	1
8p-Del	Amp_17q12	0.734	1
TP53	IDH1	0.735	1
TXNDC2	Del_18q12.2	0.735	1
ACVR1B	Del_5q12.1	0.735	1
MGA	Amp_10q22.3	0.735	1
ERBB2	Del_14q11.2	0.735	1
PTCH1	Del_16q23.1	0.735	1
PIK3R1	Del_19p13.3	0.735	1
Amp_1q31.1	Del_14q11.2	0.735	1
Amp_17q24.1	Del_15q21.1	0.735	1
Del_7q31.1	Del_18p11.31	0.735	1
ARID1A	C14orf184	0.736	1
CRIPAK	ZBTB20	0.736	1
WNT1	Del_15q11.2	0.736	1
MAPK6	Amp_12p13.33	0.736	1
PIK3R1	VCX2	0.736	1
SMAD4	Del_1p36.11	0.736	1
FYN	Del_15q21.1	0.736	1
CDK12	Del_16p13.3	0.736	1
BIRC3	Del_14q11.2	0.736	1
16q-Amp	Del_15q21.1	0.736	1
7p-Amp	Del_1p33	0.736	1
Amp_8p11.21	Del_2q22.1	0.736	1
ZFP36L2	Del_18q12.2	0.737	1
Amp_11p15.5	Del_15q22.33	0.737	1
TP53	IQCD	0.738	1
C14orf184	Amp_20q13.12	0.738	1
BCORL1	Del_15q22.33	0.738	1
ZFP36L2	ERBB2	0.739	1
ZFP36L2	Amp_1q31.1	0.739	1
B2M	ERBB2	0.739	1
B2M	Amp_17q24.1	0.739	1
RPTN	Amp_17q24.1	0.739	1
ERBB2	Del_8q11.1	0.739	1
RBPJ	Amp_1q31.1	0.739	1
RBPJ	Amp_17q24.1	0.739	1
RBBP7	Amp_1q31.1	0.739	1
RBBP7	Amp_17q24.1	0.739	1
ACVR1B	SMAD2	0.74	1
SMAD2	Del_16q23.1	0.74	1
THOC7	ROS1	0.74	1
PIK3R1	Del_15q22.33	0.74	1
SMAD4	6p-Amp	0.74	1
SMAD4	8q-Amp	0.74	1
KDM6A	Del_12p13.1	0.74	1
Del_3p14.2	Del_5q21.2	0.74	1
ZFP36L2	18p-Del	0.741	1
ZFP36L2	Amp_20p11.21	0.741	1
ATXN3L	7q-Amp	0.741	1
IQCD	4p-Del	0.741	1
RLIM	Del_4q35.1	0.741	1
SETD2	Amp_16p11.2	0.741	1
CRIPAK	Del_18q21.2	0.742	1
SOX9	STARD3NL	0.742	1
SOX9	NR1H3	0.742	1
SOX9	GPATCH8	0.742	1
SOX9	BIRC3	0.742	1
SOX9	16q-Amp	0.742	1
RHOA	20p-Amp	0.742	1
NF1	Del_2q22.1	0.742	1
CHUK	Del_1p36.11	0.742	1
P2RY13	Del_5q23.3	0.742	1
PTCH1	Del_3p14.2	0.742	1
RB1	Del_3p14.2	0.742	1
ZNF486	20p-Amp	0.742	1
CTNNB1	8q-Amp	0.742	1
16q-Amp	Del_5q23.3	0.742	1
ZFP36L2	Del_21q11.2	0.743	1
B2M	Del_21q11.2	0.743	1
THOC7	ATM	0.743	1
FBXW7	PTGDR	0.743	1
ATXN3L	12q-Amp	0.743	1
ATXN3L	9p-Amp	0.743	1
NR1H3	Amp_8p11.23	0.743	1
ALPK2	8q-Amp	0.743	1
PRRG1	Del_3p14.2	0.743	1
NEXN	12q-Amp	0.743	1
NEXN	9p-Amp	0.743	1
PTGDR	Del_4q35.1	0.743	1
ATM	Del_2q22.1	0.743	1
12q-Amp	5q-Del	0.743	1
16p-Amp	Del_21q11.2	0.743	1
9p-Amp	5q-Del	0.743	1
9p-Amp	Amp_2q33.1	0.743	1
9p-Amp	Amp_19q12	0.743	1
Amp_10q22.3	Del_3p14.2	0.743	1
Amp_19q12	Del_10q21.1	0.743	1
ERBB2	Del_4q22.1	0.744	1
C11orf30	21q-Del	0.744	1
PCBP1	17p-Del	0.744	1
BCORL1	4p-Del	0.744	1
Amp_1q31.1	Del_4q22.1	0.744	1
Del_3p26.3	Del_5q21.2	0.744	1
TXNDC2	BCL9	0.745	1
GGT1	Del_5q22.2	0.745	1
SELPLG	Del_21q21.1	0.745	1
BCL9	Del_19p13.3	0.745	1
C2orf29	Del_21q21.1	0.745	1
SLC26A8	Del_21q21.1	0.745	1
SLC12A6	Del_6q26	0.745	1
SLC12A6	Del_19p13.3	0.745	1
HIST1H1T	Del_5q22.2	0.745	1
CTNNB1	Del_16p13.3	0.745	1
Amp_17q12	Del_10q23.31	0.745	1
SOX9	BCOR	0.746	1
SOX9	DIP2B	0.746	1
SMAD2	FBXW7	0.746	1
ATXN3L	Amp_20q12	0.746	1
ATXN3L	Del_5q22.2	0.746	1
PIK3R1	Del_14q11.2	0.746	1
PIK3R1	Del_15q21.1	0.746	1
NEXN	Del_5q22.2	0.746	1
SELPLG	20p-Del	0.747	1
PTCH1	Amp_6p21.1	0.747	1
DDX26B	Del_10q23.31	0.747	1
RB1	Amp_6p21.1	0.747	1
PTEN	1p-Del	0.747	1
C14orf184	Del_18q22.1	0.747	1
ALDH1A3	20p-Del	0.747	1
HIST1H1T	Amp_8q24.21	0.747	1
12p-Amp	Del_18q21.2	0.747	1
8q-Amp	14q-Del	0.747	1
Amp_20p12.1	Del_7q31.1	0.747	1
ACVR1B	Del_3p14.2	0.748	1
BCOR	17q-Amp	0.748	1
NLRC4	Del_22q13.32	0.748	1
DIP2B	17q-Amp	0.748	1
SLC12A6	Del_22q13.32	0.748	1
ARID1A	Del_15q21.1	0.749	1
TP53	8p-Amp	0.749	1
ZFP36L2	Del_1p33	0.749	1
TXNDC2	7p-Amp	0.749	1
TXNDC2	8q-Amp	0.749	1
CDH1	17q-Amp	0.749	1
CDH1	Del_4q22.1	0.749	1
RHOA	8p-Amp	0.749	1
MGA	4q-Del	0.749	1
IQCD	8p-Amp	0.749	1
ASXL1	Amp_12p13.33	0.749	1
IFT57	8p-Amp	0.749	1
RBPJ	Del_1p33	0.749	1
BMPR2	1p-Del	0.749	1
GMPS	Del_1p33	0.749	1
PRPS1	CREBBP	0.749	1
PRPS1	Del_15q22.33	0.749	1
PTGDR	Del_15q22.33	0.749	1
CREBBP	Del_7q31.1	0.749	1
SMAD4	9p-Amp	0.75	1
CTNNB1	Del_10q21.1	0.75	1
Amp_13q12.13	Del_6p25.3	0.75	1
FMN2	GGT1	0.751	1
STARD3NL	Del_1p13.2	0.751	1
P2RY13	12p-Amp	0.751	1
P2RY13	4q-Del	0.751	1
P2RY13	Amp_11p15.5	0.751	1
NR1H3	12p-Amp	0.751	1
PCBP1	12p-Amp	0.751	1
PCBP1	4q-Del	0.751	1
PCBP1	Amp_11p15.5	0.751	1
ROS1	7p-Amp	0.751	1
ROS1	8q-Amp	0.751	1
RBPJ	14q-Del	0.751	1
RBBP7	14q-Del	0.751	1
DCLK2	4q-Del	0.751	1
DCLK2	Amp_11p15.5	0.751	1
DCLK2	Del_1p13.2	0.751	1
FYN	12p-Amp	0.751	1
FYN	Amp_11p15.5	0.751	1
FYN	Del_1p13.2	0.751	1
GPATCH8	12p-Amp	0.751	1
GPATCH8	4q-Del	0.751	1
BIRC3	12p-Amp	0.751	1
BIRC3	Del_1p13.2	0.751	1
SMAD2	Amp_8p11.21	0.752	1
TPRKB	7p-Amp	0.752	1
TPRKB	8q-Amp	0.752	1
HIST1H1T	7p-Amp	0.752	1
HIST1H1T	8q-Amp	0.752	1
MLH1	MAP4K3	0.753	1
MLH1	17q-Amp	0.753	1
C2orf29	Del_4q22.1	0.753	1
CDK12	NEXN	0.754	1
PTGDR	Del_22q13.32	0.754	1
2p-Amp	Del_1p36.11	0.754	1
2q-Amp	Del_1p36.11	0.754	1
6p-Amp	Del_1p36.11	0.754	1
Amp_15q26.1	Del_1p36.11	0.754	1
Del_7q31.1	Del_22q13.32	0.754	1
FMN2	Del_3q26.31	0.755	1
BCL9	8p-Amp	0.755	1
NLRC4	8p-Amp	0.755	1
CHUK	Del_16q23.1	0.756	1
ATXN3L	Amp_20p11.21	0.756	1
PTEN	Del_8p22	0.756	1
BCORL1	Amp_8q24.21	0.756	1
HIST1H1T	20p-Amp	0.756	1
8p-Amp	Del_15q11.2	0.756	1
18p-Del	Amp_19q12	0.756	1
APC	Del_19p13.3	0.757	1
EGR1	Del_5q21.2	0.757	1
TPRKB	15q-Del	0.757	1
TPRKB	Amp_12p13.33	0.757	1
ST3GAL6	Del_5q21.2	0.757	1
RLIM	Del_22q13.32	0.757	1
ROS1	15q-Del	0.757	1
VCX2	21q-Del	0.757	1
CREBBP	Del_10q25.2	0.757	1
RNF43	Del_10q23.31	0.758	1
FAM123B	9p-Amp	0.758	1
FAM123B	Del_10q21.1	0.758	1
MLH1	Del_10q21.1	0.758	1
RBPJ	Amp_13q12.2	0.758	1
SMAD4	Del_3q26.31	0.758	1
TOP2B	Amp_16p11.2	0.758	1
C14orf184	Del_18q21.2	0.758	1
ATM	7q-Amp	0.758	1
Amp_16p11.2	Del_6q26	0.758	1
CRIPAK	Del_17p12	0.759	1
CDH1	4p-Del	0.759	1
BCOR	Del_1p13.2	0.759	1
SMAD2	NF1	0.759	1
WNT1	7q-Amp	0.759	1
MGA	PCBP1	0.759	1
ERBB2	MPHOSPH10	0.759	1
ASXL1	PRRG1	0.759	1
ASXL1	Amp_10q22.3	0.759	1
ALG12	7q-Amp	0.759	1
NLRC4	Amp_5p12	0.759	1
DIP2B	12p-Amp	0.759	1
PRRG1	7q-Amp	0.759	1
PRRG1	Amp_17q12	0.759	1
PCBP1	Del_5q12.1	0.759	1
RLIM	Amp_1q31.1	0.759	1
C2orf29	Amp_13q12.13	0.759	1
BCORL1	Amp_5p12	0.759	1
SLC12A6	Amp_5p12	0.759	1
BIRC3	Del_5q12.1	0.759	1
GMNN	7p-Amp	0.759	1
GMNN	8q-Amp	0.759	1
12p-Amp	Del_17q24.3	0.759	1
16q-Amp	Del_5q12.1	0.759	1
1p-Del	Amp_1q31.1	0.759	1
Amp_11p15.5	Del_17q24.3	0.759	1
Amp_15q26.1	Del_15q15.2	0.759	1
Del_1p13.2	Del_17q24.3	0.759	1
PRKDC	PRPS1	0.76	1
PRKDC	Del_7q31.1	0.76	1
ZBTB20	12q-Amp	0.76	1
ZBTB20	9p-Amp	0.76	1
NR1H3	8q-Amp	0.76	1
DCLK2	7p-Amp	0.76	1
DCLK2	8q-Amp	0.76	1
IDH1	9p-Amp	0.76	1
17q-Amp	9p-Amp	0.76	1
17q-Amp	Del_10q21.1	0.76	1
8q-Amp	Del_21q21.1	0.76	1
8p-Del	Amp_1q31.1	0.76	1
RBBP7	Amp_8p11.21	0.761	1
GMPS	Amp_8p11.21	0.761	1
14q-Del	Amp_8p11.21	0.761	1
Amp_8p11.21	Del_8q11.1	0.761	1
APC	MAPK6	0.762	1
APC	SLC26A8	0.762	1
APC	FKBP9	0.762	1
ZFP36L2	Amp_20q11.21	0.762	1
MLH1	Del_1p36.11	0.762	1
ALPK2	Del_21q21.1	0.762	1
MPHOSPH10	Amp_20p12.1	0.762	1
NF2	Del_3p14.2	0.763	1
ATXN3L	Amp_12p13.33	0.763	1
NEXN	Amp_12p13.33	0.763	1
12p-Amp	Del_3p14.2	0.763	1
Amp_12p13.33	Del_3q26.31	0.763	1
Amp_16p11.2	Del_15q22.33	0.763	1
PLEKHF2	22q-Del	0.764	1
VCX2	22q-Del	0.764	1
RBPJ	Amp_13q22.1	0.764	1
PRPS1	Amp_20q13.12	0.764	1
PTGDR	Amp_20q13.12	0.764	1
ATM	Del_10q23.31	0.764	1
2p-Amp	18q-Del	0.764	1
2q-Amp	18q-Del	0.764	1
Amp_15q26.1	Del_14q11.2	0.764	1
Amp_15q26.1	Del_15q21.1	0.764	1
ARID1A	12p-Amp	0.765	1
ARID1A	4q-Del	0.765	1
CDH1	Del_5q23.3	0.765	1
FMN2	Del_4q22.1	0.765	1
ATXN3L	20p-Del	0.765	1
L1TD1	20p-Del	0.765	1
TOP2B	Del_5q21.2	0.765	1
LARP4B	Del_12p13.1	0.765	1
PRPS1	Del_21q11.2	0.765	1
20p-Del	Del_3q26.31	0.765	1
RNF43	Amp_12p13.33	0.766	1
FAM123B	THOC7	0.766	1
SELPLG	8p-Del	0.766	1
MAPK6	8p-Del	0.766	1
DIP2B	Amp_8p11.23	0.766	1
RB1	8p-Del	0.766	1
BMPR2	Del_5q21.2	0.766	1
RNF43	Amp_10q22.3	0.767	1
STARD3NL	Del_3p14.2	0.767	1
PRRG1	4p-Del	0.767	1
PCBP1	Del_3p14.2	0.767	1
RB1	Amp_8q24.21	0.767	1
FYN	Del_3p14.2	0.767	1
SLC12A6	Del_21q11.2	0.767	1
BIRC3	Del_3p14.2	0.767	1
Amp_8p11.23	Del_3p26.3	0.767	1
CRIPAK	C11orf30	0.768	1
CRIPAK	Amp_6p21.1	0.768	1
CRIPAK	Del_3p26.3	0.768	1
SELPLG	Del_10q25.2	0.768	1
ATXN3L	Amp_8q24.21	0.768	1
C2orf29	Del_10q25.2	0.768	1
SLC26A8	Del_10q25.2	0.768	1
HLA-A	Del_10q23.31	0.768	1
BMPR2	Del_16p13.3	0.768	1
NEXN	Amp_8q24.21	0.768	1
CTNNB1	Del_1p36.11	0.768	1
TXNDC2	Del_1p36.11	0.769	1
RLIM	Del_1p33	0.769	1
HIST1H1T	Del_4q22.1	0.769	1
ALPK2	Del_16q23.1	0.77	1
SETD2	Del_15q15.2	0.77	1
PRPS1	14q-Del	0.77	1
TXNDC2	Del_16q23.1	0.771	1
ACVR1B	Del_6p25.3	0.771	1
ZBTB20	Del_5q22.2	0.771	1
L1TD1	Del_21q21.1	0.771	1
MAP4K3	Del_5q22.2	0.771	1
NEXN	8q-Amp	0.771	1
PTGDR	Amp_20p11.21	0.771	1
KDM6A	Del_6p25.3	0.771	1
KDM6A	Del_19p13.3	0.771	1
17q-Amp	Del_5q22.2	0.771	1
Amp_19q12	Del_21q21.1	0.771	1
Del_6p25.3	Del_16q23.1	0.771	1
Del_16q23.1	Del_19p13.3	0.771	1
TP53	Del_10q21.1	0.772	1
BMPR2	Del_1p33	0.772	1
ATM	Del_8p22	0.772	1
8p-Amp	Del_10q23.31	0.772	1
OR4D10	12p-Amp	0.773	1
ERBB2	Amp_1q31.1	0.773	1
DDX26B	Amp_11p15.5	0.773	1
CHUK	20p-Amp	0.774	1
NEXN	Amp_13q12.2	0.774	1
FAM123B	Del_22q13.32	0.775	1
TXNDC2	22q-Del	0.775	1
TXNDC2	Del_4p16.1	0.775	1
CDH1	FYN	0.775	1
CDH1	16q-Amp	0.775	1
MLH1	Del_22q13.32	0.775	1
TOP2B	Del_4p16.1	0.775	1
SETD2	16q-Amp	0.775	1
12p-Amp	Del_10q21.1	0.775	1
12q-Amp	Del_1p13.2	0.775	1
9p-Amp	4q-Del	0.775	1
9p-Amp	Del_1p13.2	0.775	1
22q-Del	Del_6p25.3	0.775	1
SMAD2	9p-Amp	0.776	1
OR4D10	Amp_8p11.23	0.776	1
BCL9	14q-Del	0.776	1
IFT57	13q-Amp	0.776	1
12q-Amp	Del_12p13.1	0.776	1
CRIPAK	SETD2	0.777	1
ZFP36L2	Amp_8q24.21	0.777	1
MLH1	Del_12p13.1	0.777	1
RPTN	Amp_8q24.21	0.777	1
DIP2B	17p-Del	0.777	1
GMPS	Amp_8q24.21	0.777	1
CTNNB1	Amp_2q33.1	0.777	1
CTNNB1	Del_3q26.31	0.777	1
SELPLG	Amp_1q31.1	0.778	1
SELPLG	Amp_17q24.1	0.778	1
FAM9A	Del_5q22.2	0.778	1
THOC7	Del_5q22.2	0.778	1
ERBB2	SLC26A8	0.778	1
PIK3R1	18p-Del	0.778	1
C2orf29	Amp_1q31.1	0.778	1
SLC26A8	Amp_17q24.1	0.778	1
FKBP9	Amp_1q31.1	0.778	1
Amp_1q31.1	Del_15q22.33	0.778	1
Amp_17q24.1	Del_15q22.33	0.778	1
BCOR	15q-Del	0.779	1
FMN2	17q-Amp	0.779	1
ALG12	CTNNB1	0.779	1
LARP4B	Amp_12p13.33	0.779	1
Amp_19q12	Del_8p23.2	0.779	1
BCOR	Del_3p26.3	0.78	1
GGT1	NF2	0.78	1
CHUK	Del_17q24.3	0.78	1
TPRKB	Del_4q35.1	0.78	1
ALG12	20p-Amp	0.78	1
DIP2B	Amp_6p21.1	0.78	1
DIP2B	Del_3p26.3	0.78	1
C14orf184	20p-Amp	0.78	1
C14orf184	Del_8p23.2	0.78	1
NEXN	Amp_13q22.1	0.78	1
HIST1H1T	Del_4q35.1	0.78	1
9p-Amp	Del_14q11.2	0.78	1
ATM	Del_8p23.2	0.781	1
APC	20p-Del	0.782	1
ARID1A	2p-Amp	0.782	1
ARID1A	2q-Amp	0.782	1
ARID1A	6p-Amp	0.782	1
LARP4B	Del_3p14.2	0.782	1
CRIPAK	TOP2B	0.783	1
CRIPAK	Del_6p25.3	0.783	1
CRIPAK	Del_6q26	0.783	1
CRIPAK	Del_19p13.3	0.783	1
P2RY13	Amp_17q12	0.783	1
ALPK2	16q-Amp	0.783	1
ASXL1	PCBP1	0.783	1
C2orf29	Del_8p22	0.783	1
DCLK2	Amp_17q12	0.783	1
PTEN	Del_5q22.2	0.783	1
Amp_13q12.2	Del_7q31.1	0.783	1
SELPLG	Del_22q13.32	0.784	1
CHUK	Amp_8p11.21	0.784	1
IFT57	21q-Del	0.784	1
ROS1	Del_19p13.3	0.784	1
C2orf29	Del_22q13.32	0.784	1
ATM	Del_5q21.2	0.784	1
ZNF486	Del_5q21.2	0.784	1
Amp_17q24.1	Del_5q21.2	0.784	1
SOX9	B2M	0.785	1
SOX9	RBBP7	0.785	1
SOX9	16p-Amp	0.785	1
SOX9	Del_8q11.1	0.785	1
ACVR1B	Amp_5p12	0.785	1
MLH1	Del_1p13.2	0.785	1
TPRKB	Del_15q22.33	0.785	1
SMAD4	Del_4p16.1	0.785	1
HIST1H1T	CREBBP	0.785	1
ZFP36L2	Del_1p36.11	0.786	1
CDH1	12p-Amp	0.786	1
ERBB2	Del_1p33	0.786	1
ALPK2	Del_4p16.1	0.786	1
ASXL1	Del_4p16.1	0.786	1
NLRC4	Amp_16p11.2	0.786	1
RBPJ	Del_1p36.11	0.786	1
L1TD1	Del_10q25.2	0.786	1
BMPR2	Amp_19q12	0.786	1
BCORL1	Amp_16p11.2	0.786	1
SLC12A6	Amp_16p11.2	0.786	1
16p-Amp	Del_1p36.11	0.786	1
Amp_17q24.1	Del_1p33	0.786	1
ARID1A	Amp_8p11.21	0.787	1
ZFP36L2	Del_8p23.2	0.787	1
ACVR1B	7q-Amp	0.787	1
RPTN	20p-Amp	0.787	1
RPTN	Del_8p23.2	0.787	1
ZBTB20	Amp_12p13.33	0.787	1
MPHOSPH10	Del_10q23.31	0.787	1
SLC26A8	Del_1p33	0.787	1
ALDH1A3	Del_1p33	0.787	1
GMPS	20p-Amp	0.787	1
PRPS1	Amp_13q22.1	0.787	1
ATM	2p-Amp	0.787	1
ATM	2q-Amp	0.787	1
IDH1	15q-Del	0.787	1
17q-Amp	15q-Del	0.787	1
20p-Amp	Del_8q11.1	0.787	1
9p-Amp	Del_5q12.1	0.787	1
Amp_8p11.21	Del_15q11.2	0.787	1
PCBP1	18p-Del	0.788	1
CTNNB1	Amp_10q22.3	0.788	1
TP53	ATXN3L	0.789	1
TP53	Amp_2q33.1	0.789	1
FMN2	9p-Amp	0.789	1
FMN2	Del_10q21.1	0.789	1
OR4D10	Del_3p14.2	0.789	1
THOC7	Amp_12p13.33	0.789	1
MVK	Amp_8q24.21	0.789	1
GRB2	15q-Del	0.789	1
PRRG1	Amp_8q24.21	0.789	1
PIK3R1	Amp_10q22.3	0.789	1
RSPH3	Amp_12p13.33	0.789	1
DDX26B	Del_3p14.2	0.789	1
KDM6A	Del_8p22	0.789	1
Amp_8p11.23	Del_10q21.1	0.789	1
Amp_8p11.23	Del_15q15.2	0.789	1
Amp_20p11.21	Del_1p33	0.789	1
P2RY13	4p-Del	0.79	1
GPATCH8	4p-Del	0.79	1
HIST1H1T	Del_22q13.32	0.79	1
Amp_16p11.2	Del_21q11.2	0.79	1
Amp_17q12	Del_15q15.2	0.79	1
Amp_20p12.1	Del_3p26.3	0.79	1
CDH1	6p-Amp	0.791	1
CDH1	Amp_15q26.1	0.791	1
MLH1	Del_5q22.2	0.791	1
FBXW7	GMNN	0.791	1
CHUK	12q-Amp	0.791	1
CHUK	Del_10q21.1	0.791	1
ALPK2	4q-Del	0.791	1
ASXL1	Del_1p13.2	0.791	1
ZNF486	Del_4p16.1	0.791	1
12q-Amp	Del_3p26.3	0.791	1
9p-Amp	Del_3p26.3	0.791	1
Amp_8p11.23	Del_4q22.1	0.791	1
PIK3R1	14q-Del	0.792	1
RBBP7	Del_15q15.2	0.792	1
RB1	Del_4q35.1	0.792	1
7p-Amp	Del_10q23.31	0.792	1
8p-Amp	Del_16q23.1	0.792	1
THOC7	18q-Del	0.793	1
FBXW7	8p-Del	0.793	1
TPRKB	Del_8p22	0.793	1
DIP2B	Del_15q11.2	0.793	1
TOP2B	Amp_8p11.23	0.793	1
PTEN	Del_10q23.31	0.793	1
SETD2	Amp_8p11.23	0.793	1
BIRC3	7q-Amp	0.793	1
ZFP36L2	4q-Del	0.794	1
ZFP36L2	Amp_20q12	0.794	1
ZFP36L2	Del_1p13.2	0.794	1
B2M	12p-Amp	0.794	1
BCOR	Del_6q26	0.794	1
NF2	Del_3q26.31	0.794	1
RPTN	12p-Amp	0.794	1
RPTN	4q-Del	0.794	1
DIP2B	Del_6p25.3	0.794	1
DIP2B	Del_6q26	0.794	1
DIP2B	Del_19p13.3	0.794	1
RBPJ	Del_1p13.2	0.794	1
SMAD4	Del_8q11.1	0.794	1
RBBP7	12p-Amp	0.794	1
RBBP7	4q-Del	0.794	1
HLA-A	4q-Del	0.794	1
LARP4B	Del_6q26	0.794	1
GMPS	12p-Amp	0.794	1
PTGDR	Del_1p36.11	0.794	1
GMNN	Amp_20p12.1	0.794	1
16p-Amp	Del_1p13.2	0.794	1
22q-Del	Amp_8p11.21	0.794	1
Amp_8p11.21	Del_4p16.1	0.794	1
FAM123B	VCX2	0.795	1
ZFP36L2	Amp_13q12.13	0.795	1
NF2	22q-Del	0.795	1
ATXN3L	Amp_17q24.1	0.795	1
ERBB2	L1TD1	0.795	1
ERBB2	5q-Del	0.795	1
ERBB2	Amp_2q33.1	0.795	1
ERBB2	Del_3q26.31	0.795	1
GRB2	Del_21q21.1	0.795	1
DIP2B	8q-Amp	0.795	1
RSPH3	Del_21q21.1	0.795	1
LARP4B	8q-Amp	0.795	1
NEXN	Amp_1q31.1	0.795	1
NEXN	Amp_17q24.1	0.795	1
17q-Amp	Del_21q21.1	0.795	1
5q-Del	Amp_1q31.1	0.795	1
5q-Del	Amp_17q24.1	0.795	1
MLH1	20p-Del	0.796	1
VCX2	Amp_13q22.1	0.796	1
2p-Amp	Del_18q12.2	0.796	1
2q-Amp	Del_18q12.2	0.796	1
Amp_20p11.21	Del_22q13.32	0.796	1
FAM123B	Del_3p26.3	0.798	1
MLH1	Del_3p26.3	0.798	1
SELPLG	Del_21q11.2	0.798	1
BCL9	Del_16q23.1	0.798	1
ASXL1	Del_4q35.1	0.798	1
NLRC4	Del_16q23.1	0.798	1
SLC26A8	Del_21q11.2	0.798	1
RB1	Del_16p13.3	0.798	1
BMPR2	Del_10q23.31	0.798	1
BIRC3	8p-Amp	0.798	1
20q-Amp	Amp_10q22.3	0.798	1
9p-Amp	Del_3p14.2	0.798	1
RPTN	Del_14q11.2	0.799	1
C2orf29	Del_18p11.31	0.799	1
RBPJ	Del_14q11.2	0.799	1
RBBP7	Del_14q11.2	0.799	1
RBBP7	Del_15q21.1	0.799	1
PTEN	Del_16p13.3	0.799	1
PRPS1	Del_15q15.2	0.799	1
9p-Amp	15q-Del	0.799	1
Amp_12p13.33	Del_10q21.1	0.799	1
OR4D10	8q-Amp	0.8	1
FAM9A	7p-Amp	0.8	1
THOC7	Del_4q22.1	0.8	1
ATXN3L	Amp_20q13.12	0.8	1
RSPH3	7p-Amp	0.8	1
HIST1H1T	Amp_20p12.1	0.8	1
Amp_13q12.13	Del_2p12	0.8	1
SMAD2	FMN2	0.801	1
SELPLG	Amp_20p12.1	0.801	1
MGA	16p-Amp	0.801	1
ASXL1	Del_14q11.2	0.801	1
Amp_2q33.1	Del_15q22.33	0.801	1
Amp_5p12	Del_15q15.2	0.801	1
Amp_17q12	Del_15q21.1	0.801	1
FAM123B	Amp_8p11.23	0.802	1
STARD3NL	Amp_13q12.2	0.802	1
PRKDC	Del_16q23.1	0.802	1
PCBP1	Amp_13q12.2	0.802	1
FYN	Amp_13q12.2	0.802	1
CDK12	Del_3p26.3	0.802	1
IDH1	Del_10q25.2	0.802	1
CTNNB1	Del_15q21.1	0.802	1
Amp_12p13.33	Del_17p12	0.802	1
FMN2	Del_5q23.3	0.803	1
PRPS1	Del_15q21.1	0.803	1
4p-Del	Amp_11p15.5	0.803	1
APC	12p-Amp	0.804	1
SOX9	RLIM	0.804	1
BCL9	21q-Del	0.804	1
ALPK2	Del_17q24.3	0.804	1
ASXL1	Del_5q12.1	0.804	1
ASXL1	Del_17q24.3	0.804	1
ROS1	Amp_5p12	0.804	1
MPHOSPH10	Del_5q23.3	0.804	1
BCORL1	21q-Del	0.804	1
SLC12A6	21q-Del	0.804	1
SLC12A6	Del_5q21.2	0.804	1
ATM	4p-Del	0.804	1
Amp_2q33.1	Del_1p33	0.804	1
Amp_19q12	Del_1p33	0.804	1
CRIPAK	Amp_8p11.21	0.805	1
SELPLG	Del_10q23.31	0.805	1
PRKDC	Amp_8q24.21	0.805	1
PTCH1	Amp_17q24.1	0.805	1
C2orf29	Del_10q23.31	0.805	1
RBBP7	Amp_8p11.23	0.805	1
RB1	Amp_13q22.1	0.805	1
TOP2B	9p-Amp	0.805	1
TOP2B	Del_10q21.1	0.805	1
GMPS	Amp_8p11.23	0.805	1
12q-Amp	Del_6q26	0.805	1
9p-Amp	Del_6q26	0.805	1
9p-Amp	Del_19p13.3	0.805	1
BCOR	Del_8p23.2	0.806	1
STARD3NL	Amp_13q22.1	0.806	1
PCBP1	Amp_13q22.1	0.806	1
BMPR2	8q-Amp	0.806	1
FYN	Amp_13q22.1	0.806	1
HIST1H1T	Amp_20q11.21	0.806	1
IDH1	18p-Del	0.806	1
12p-Amp	20p-Del	0.806	1
CRIPAK	18q-Del	0.807	1
TP53	EGR1	0.807	1
ST3GAL6	Del_5q22.2	0.807	1
PLEKHF2	Del_5q22.2	0.807	1
ATM	Del_1p36.11	0.807	1
CRIPAK	8p-Amp	0.808	1
FAM9A	Amp_8q24.21	0.808	1
DIP2B	Amp_5p12	0.808	1
LARP4B	Amp_5p12	0.808	1
12p-Amp	Del_5q22.2	0.808	1
Amp_13q12.13	Del_7q31.1	0.808	1
MLH1	Del_5q21.2	0.809	1
SMAD2	Amp_12p13.33	0.809	1
L1TD1	Del_22q13.32	0.809	1
C14orf184	Del_8p22	0.809	1
SETD2	9p-Amp	0.809	1
GMPS	Del_3p14.2	0.809	1
Amp_5p12	Del_15q21.1	0.809	1
Amp_10q22.3	Del_5q21.2	0.809	1
CRIPAK	BCL9	0.81	1
CRIPAK	BCORL1	0.81	1
TXNDC2	Del_18q22.1	0.81	1
FBXW7	21q-Del	0.81	1
RB1	4p-Del	0.81	1
KDM6A	Amp_16p11.2	0.81	1
Amp_16p11.2	Del_16q23.1	0.81	1
TP53	B2M	0.811	1
ACVR1B	Del_21q11.2	0.811	1
NF2	THOC7	0.811	1
THOC7	Del_4q35.1	0.811	1
ERBB2	MAP4K3	0.811	1
ASXL1	Amp_8p11.23	0.811	1
ROS1	Del_4q35.1	0.811	1
IDH1	Amp_17q24.1	0.811	1
8p-Amp	Del_18p11.31	0.811	1
RNF43	OR4D10	0.812	1
FAM123B	18p-Del	0.812	1
CHUK	20p-Del	0.812	1
ZBTB20	Amp_8q24.21	0.812	1
ASXL1	Del_8p22	0.812	1
RLIM	4q-Del	0.812	1
RLIM	Amp_11p15.5	0.812	1
RLIM	Del_1p13.2	0.812	1
MPHOSPH10	Amp_11p15.5	0.812	1
MAP4K3	Amp_8q24.21	0.812	1
NEXN	Amp_13q12.13	0.812	1
IDH1	Amp_8q24.21	0.812	1
1p-Del	Amp_11p15.5	0.812	1
APC	ZNF486	0.813	1
TP53	LARP4B	0.813	1
STARD3NL	FBXW7	0.813	1
FBXW7	FYN	0.813	1
MGA	Amp_8q24.21	0.813	1
BCL9	22q-Del	0.813	1
NLRC4	22q-Del	0.813	1
PTEN	Del_10q21.1	0.813	1
BCORL1	22q-Del	0.813	1
SLC12A6	8q-Amp	0.813	1
SLC12A6	22q-Del	0.813	1
Amp_8p11.21	Del_6q26	0.813	1
TP53	WNT1	0.814	1
TP53	ALG12	0.814	1
BCOR	4p-Del	0.814	1
CHUK	Del_5q22.2	0.814	1
PIK3R1	15q-Del	0.814	1
PIK3R1	Amp_12p13.33	0.814	1
ROS1	Amp_8p11.21	0.814	1
Del_3p26.3	Del_5q22.2	0.814	1
PRKDC	Amp_19q12	0.815	1
PRKDC	Del_3q26.31	0.815	1
BCL9	13q-Amp	0.815	1
PRRG1	Del_4p16.1	0.815	1
TOP2B	20p-Amp	0.815	1
MLH1	Del_3p14.2	0.816	1
BCOR	Del_4q35.1	0.816	1
BCL9	Del_1p36.11	0.816	1
GRB2	Del_15q22.33	0.816	1
RSPH3	Del_8p23.2	0.816	1
CDK12	Del_6p25.3	0.816	1
8q-Amp	Del_21q11.2	0.816	1
TP53	ALPK2	0.817	1
FBXW7	Del_6p25.3	0.817	1
ATXN3L	20q-Amp	0.817	1
MGA	4p-Del	0.817	1
ERBB2	14q-Del	0.817	1
NR1H3	Amp_20p12.1	0.817	1
ALPK2	Del_3p14.2	0.817	1
ASXL1	Del_3p14.2	0.817	1
BMPR2	Del_12p13.1	0.817	1
SETD2	16p-Amp	0.817	1
SETD2	Del_8q11.1	0.817	1
CTNNB1	15q-Del	0.817	1
CTNNB1	17p-Del	0.817	1
9p-Amp	Del_4q22.1	0.817	1
14q-Del	Amp_1q31.1	0.817	1
FAM123B	Del_19p13.3	0.818	1
TXNDC2	17p-Del	0.818	1
CDH1	Del_22q13.32	0.818	1
ATXN3L	13q-Amp	0.818	1
PLEKHF2	15q-Del	0.818	1
RB1	4q-Del	0.818	1
C14orf184	Del_18p11.31	0.818	1
APC	SMAD2	0.819	1
FMN2	4q-Del	0.819	1
PRKDC	Del_5q22.2	0.819	1
IQCD	Amp_8p11.21	0.819	1
PLAGL2	7p-Amp	0.819	1
RLIM	Del_15q15.2	0.819	1
DDX26B	8p-Amp	0.819	1
Del_16q23.1	Del_18q12.2	0.819	1
MGA	1p-Del	0.82	1
ZBTB20	Del_1p33	0.82	1
ALPK2	Del_22q13.32	0.82	1
ASXL1	Del_22q13.32	0.82	1
PCBP1	CTNNB1	0.82	1
FYN	CTNNB1	0.82	1
BCORL1	Del_17q24.3	0.82	1
PRPS1	Del_15q11.2	0.82	1
Amp_10q22.3	Amp_20q11.21	0.82	1
FAM123B	IFT57	0.821	1
SOX9	SELPLG	0.821	1
SOX9	ALDH1A3	0.821	1
SELPLG	Del_5q23.3	0.821	1
MAPK6	Del_5q23.3	0.821	1
THOC7	Del_22q13.32	0.821	1
PIK3R1	Del_17p12	0.821	1
ROS1	Amp_10q22.3	0.821	1
FKBP9	Del_5q23.3	0.821	1
ALDH1A3	Del_5q23.3	0.821	1
22q-Del	Amp_20p11.21	0.821	1
CRIPAK	Amp_16p11.2	0.822	1
FAM123B	22q-Del	0.822	1
FMN2	18p-Del	0.822	1
FMN2	Del_3p26.3	0.822	1
RPTN	Del_15q11.2	0.822	1
SMAD4	Del_1p33	0.822	1
L1TD1	Del_21q11.2	0.822	1
PTEN	Del_1p33	0.822	1
NEXN	Del_10q23.31	0.822	1
KDM6A	Del_16q23.1	0.822	1
7p-Amp	Del_10q21.1	0.822	1
21q-Del	Amp_16p11.2	0.822	1
Amp_2q33.1	Del_10q23.31	0.822	1
Del_3q26.31	Del_10q23.31	0.822	1
TXNDC2	Amp_20p12.1	0.823	1
NF2	8q-Amp	0.823	1
ROS1	Del_15q22.33	0.823	1
MPHOSPH10	Amp_8q24.21	0.823	1
VCX2	Del_21q21.1	0.823	1
TOP2B	Amp_20p12.1	0.823	1
BMPR2	Amp_8p11.21	0.823	1
IDH1	20p-Amp	0.823	1
1p-Del	Amp_8q24.21	0.823	1
ZFP36L2	ASXL1	0.824	1
SMAD2	Del_4q22.1	0.824	1
ALPK2	16p-Amp	0.824	1
ALPK2	Del_8q11.1	0.824	1
ASXL1	Del_8q11.1	0.824	1
RBPJ	Amp_17q12	0.824	1
GMPS	Amp_17q12	0.824	1
IDH1	Del_15q22.33	0.824	1
BCOR	Del_15q22.33	0.825	1
FMN2	20p-Del	0.825	1
RLIM	Del_15q21.1	0.825	1
TOP2B	20p-Del	0.825	1
MAP4K3	8p-Del	0.825	1
ATM	Del_5q23.3	0.825	1
CREBBP	4p-Del	0.825	1
20p-Del	Del_19p13.3	0.825	1
TP53	MGA	0.826	1
SMAD2	Amp_1q31.1	0.826	1
SMAD2	Amp_17q24.1	0.826	1
WNT1	Amp_8p11.21	0.826	1
TXNDC2	Del_18q21.2	0.827	1
SELPLG	Amp_8p11.21	0.827	1
THOC7	Del_18q12.2	0.827	1
PTCH1	Del_1p33	0.827	1
GRB2	Del_18q12.2	0.827	1
SMAD4	Amp_12p13.33	0.827	1
FKBP9	Amp_8p11.21	0.827	1
ATM	Amp_19q12	0.827	1
ATM	Del_3q26.31	0.827	1
20p-Del	Del_3p14.2	0.827	1
APC	Amp_1q31.1	0.828	1
CDH1	Del_6p25.3	0.828	1
FBXW7	20p-Del	0.828	1
ST3GAL6	Del_4q22.1	0.828	1
PLEKHF2	Del_4q22.1	0.828	1
RB1	Amp_2q33.1	0.828	1
NEXN	Del_8p22	0.828	1
HIST1H1T	Amp_20q12	0.828	1
4p-Del	Amp_8p11.23	0.828	1
ARID1A	Del_4q22.1	0.829	1
RNF43	9p-Amp	0.829	1
RNF43	Del_3p14.2	0.829	1
BCOR	Amp_8p11.21	0.829	1
SELPLG	12p-Amp	0.829	1
SELPLG	4q-Del	0.829	1
CHUK	15q-Del	0.829	1
CHUK	Amp_12p13.33	0.829	1
PIK3R1	21q-Del	0.829	1
C2orf29	4q-Del	0.829	1
SMAD4	GMNN	0.829	1
SMAD4	13q-Amp	0.829	1
FKBP9	Del_1p13.2	0.829	1
ALDH1A3	Del_1p13.2	0.829	1
LARP4B	Amp_8p11.21	0.829	1
12q-Amp	4p-Del	0.829	1
20q-Amp	Del_6p25.3	0.829	1
9p-Amp	4p-Del	0.829	1
15q-Del	Amp_11p15.5	0.829	1
17p-Del	Del_16q23.1	0.829	1
Amp_11p15.5	Amp_12p13.33	0.829	1
Amp_11p15.5	Del_16p13.3	0.829	1
CRIPAK	Del_21q11.2	0.83	1
STARD3NL	Del_5q21.2	0.83	1
NR1H3	21q-Del	0.83	1
GRB2	Del_21q11.2	0.83	1
PCBP1	21q-Del	0.83	1
RSPH3	Del_21q11.2	0.83	1
DCLK2	21q-Del	0.83	1
FYN	Del_5q21.2	0.83	1
GPATCH8	21q-Del	0.83	1
16q-Amp	21q-Del	0.83	1
16q-Amp	Del_5q21.2	0.83	1
17q-Amp	Del_22q13.32	0.83	1
Amp_20p12.1	Del_1p33	0.83	1
ARID1A	Del_15q15.2	0.831	1
RNF43	Del_8q11.1	0.831	1
ZFP36L2	4p-Del	0.831	1
ZFP36L2	Del_8p22	0.831	1
BCL9	Del_10q21.1	0.831	1
BCL9	Del_14q11.2	0.831	1
ERBB2	8q-Amp	0.831	1
NLRC4	12q-Amp	0.831	1
NLRC4	Del_10q21.1	0.831	1
RBPJ	4p-Del	0.831	1
RBBP7	4p-Del	0.831	1
HLA-A	4p-Del	0.831	1
BMPR2	Amp_6p21.1	0.831	1
BCORL1	9p-Amp	0.831	1
BCORL1	Del_10q21.1	0.831	1
BCORL1	Del_15q21.1	0.831	1
SLC12A6	9p-Amp	0.831	1
APC	9p-Amp	0.832	1
BCOR	7q-Amp	0.832	1
STARD3NL	Amp_13q12.13	0.832	1
DIP2B	Amp_16p11.2	0.832	1
IFT57	Del_5q22.2	0.832	1
BMPR2	12p-Amp	0.832	1
BMPR2	Del_1p13.2	0.832	1
FYN	Amp_13q12.13	0.832	1
LARP4B	Amp_16p11.2	0.832	1
ZNF486	Del_5q22.2	0.832	1
CRIPAK	ACVR1B	0.833	1
CRIPAK	Del_16q23.1	0.833	1
CRIPAK	Del_18q22.1	0.833	1
TOP2B	Del_5q22.2	0.833	1
2p-Amp	8p-Del	0.833	1
2q-Amp	8p-Del	0.833	1
6p-Amp	8p-Del	0.833	1
Del_5q22.2	Del_6q26	0.833	1
Del_16q23.1	Del_17p12	0.833	1
SOX9	Amp_1q31.1	0.834	1
SOX9	Amp_17q24.1	0.834	1
SOX9	Amp_20p11.21	0.834	1
SOX9	Del_4q22.1	0.834	1
ZFP36L2	17p-Del	0.834	1
CDH1	16p-Amp	0.834	1
SMAD2	Del_1p33	0.834	1
FMN2	Del_5q12.1	0.834	1
RLIM	Amp_20q11.21	0.834	1
RBPJ	7p-Amp	0.834	1
RBBP7	8q-Amp	0.834	1
GMPS	8q-Amp	0.834	1
7p-Amp	Del_8q11.1	0.834	1
8p-Amp	Del_14q11.2	0.834	1
8p-Amp	Del_15q21.1	0.834	1
Amp_12p13.33	Del_22q13.32	0.834	1
Amp_17q24.1	Del_5q23.3	0.834	1
FAM9A	14q-Del	0.835	1
RSPH3	14q-Del	0.835	1
NEXN	Amp_20p12.1	0.835	1
2p-Amp	Del_18q22.1	0.835	1
2q-Amp	Del_18q22.1	0.835	1
6p-Amp	Del_18q22.1	0.835	1
14q-Del	Del_2q22.1	0.835	1
SMAD2	7p-Amp	0.836	1
SMAD2	8q-Amp	0.836	1
NF2	Del_4q22.1	0.836	1
P2RY13	22q-Del	0.836	1
P2RY13	Del_4p16.1	0.836	1
NR1H3	22q-Del	0.836	1
NR1H3	Del_4p16.1	0.836	1
C11orf30	Del_21q21.1	0.836	1
DCLK2	22q-Del	0.836	1
DCLK2	Del_4p16.1	0.836	1
FYN	22q-Del	0.836	1
FYN	Del_4p16.1	0.836	1
BIRC3	22q-Del	0.836	1
HIST1H1T	18p-Del	0.836	1
HIST1H1T	Amp_20p11.21	0.836	1
ARID1A	Amp_5p12	0.837	1
TP53	CDK12	0.837	1
ZFP36L2	18q-Del	0.837	1
B2M	8p-Amp	0.837	1
SMAD2	NF2	0.837	1
STARD3NL	Amp_8q24.21	0.837	1
SELPLG	Del_1p36.11	0.837	1
SELPLG	Del_5q12.1	0.837	1
NF2	Del_12p13.1	0.837	1
MAPK6	Del_5q12.1	0.837	1
RPTN	8p-Amp	0.837	1
RPTN	18q-Del	0.837	1
ATXN3L	Del_5q23.3	0.837	1
MVK	SMAD4	0.837	1
SLC26A8	Del_1p36.11	0.837	1
SLC26A8	Del_5q12.1	0.837	1
DCLK2	Amp_8q24.21	0.837	1
NEXN	Del_5q23.3	0.837	1
KDM6A	Del_5q21.2	0.837	1
17q-Amp	Del_10q23.31	0.837	1
Amp_2q33.1	Del_5q23.3	0.837	1
Amp_13q22.1	Del_6p25.3	0.837	1
Amp_16p11.2	Del_1p36.11	0.837	1
APC	BCORL1	0.838	1
TP53	SELPLG	0.838	1
TP53	ALDH1A3	0.838	1
ZFP36L2	Amp_20q13.12	0.838	1
BCL9	Amp_8p11.23	0.838	1
ST3GAL6	Del_4q35.1	0.838	1
PTCH1	Del_5q12.1	0.838	1
VCX2	Del_4q35.1	0.838	1
18q-Del	Del_7q31.1	0.838	1
Del_3p14.2	Del_5q22.2	0.838	1
OR4D10	Amp_20p11.21	0.839	1
EGR1	7p-Amp	0.839	1
EGR1	8q-Amp	0.839	1
ERBB2	Amp_6p21.1	0.839	1
ERBB2	Del_3p26.3	0.839	1
ST3GAL6	7p-Amp	0.839	1
C11orf30	Amp_17q24.1	0.839	1
FMN2	13q-Amp	0.84	1
FMN2	Del_6p25.3	0.84	1
THOC7	FBXW7	0.84	1
FBXW7	Del_2q22.1	0.84	1
HIST1H1T	Amp_8p11.23	0.84	1
7q-Amp	Del_7q31.1	0.84	1
8p-Amp	Del_3p14.2	0.84	1
ATXN3L	Amp_20q11.21	0.841	1
ALPK2	1p-Del	0.841	1
ALPK2	Del_21q11.2	0.841	1
ASXL1	1p-Del	0.841	1
ASXL1	Amp_17q12	0.841	1
ASXL1	Del_21q11.2	0.841	1
PIK3R1	Del_4p16.1	0.841	1
RSPH3	13q-Amp	0.841	1
CTNNB1	Del_5q23.3	0.841	1
FAM123B	Del_4q22.1	0.842	1
RHOA	15q-Del	0.842	1
MGA	Del_10q25.2	0.842	1
IQCD	15q-Del	0.842	1
PLEKHF2	Del_15q22.33	0.842	1
IFT57	Amp_12p13.33	0.842	1
ROS1	16q-Amp	0.842	1
SMAD4	Amp_13q22.1	0.842	1
RB1	Amp_8p11.21	0.842	1
FKBP9	Del_15q15.2	0.842	1
PTEN	5q-Del	0.842	1
ZNF486	Amp_12p13.33	0.842	1
CREBBP	Del_10q21.1	0.842	1
9p-Amp	Amp_16p11.2	0.842	1
Amp_16p11.2	Del_10q21.1	0.842	1
Del_15q15.2	Del_16p13.3	0.842	1
ACVR1B	Del_17q24.3	0.843	1
IDH1	Del_21q11.2	0.843	1
KDM6A	Del_17q24.3	0.843	1
APC	2p-Amp	0.844	1
FAM123B	MVK	0.844	1
ZFP36L2	Del_18p11.31	0.844	1
TXNDC2	Del_10q25.2	0.844	1
MLH1	Amp_10q22.3	0.844	1
SMAD2	Del_15q22.33	0.844	1
FMN2	Del_5q21.2	0.844	1
SELPLG	Del_3p14.2	0.844	1
MAPK6	Del_3p14.2	0.844	1
THOC7	Amp_20p12.1	0.844	1
ERBB2	4q-Del	0.844	1
ERBB2	Amp_8p11.21	0.844	1
ALG12	Amp_20p11.21	0.844	1
GRB2	Amp_20p12.1	0.844	1
PIK3R1	Del_8p22	0.844	1
TOP2B	Del_10q25.2	0.844	1
PTEN	Del_8q11.1	0.844	1
ALDH1A3	Del_3p14.2	0.844	1
2p-Amp	Del_18q21.2	0.844	1
2q-Amp	Del_18q21.2	0.844	1
6p-Amp	Del_18q21.2	0.844	1
4q-Del	Amp_17q24.1	0.844	1
Amp_11p15.5	Del_15q15.2	0.844	1
Amp_16p11.2	Del_15q15.2	0.844	1
Amp_17q24.1	Del_1p13.2	0.844	1
STARD3NL	20p-Amp	0.845	1
ATXN3L	12p-Amp	0.845	1
ATXN3L	4q-Del	0.845	1
P2RY13	Del_8p23.2	0.845	1
NR1H3	Del_8p23.2	0.845	1
L1TD1	12p-Amp	0.845	1
L1TD1	Amp_11p15.5	0.845	1
L1TD1	Del_1p13.2	0.845	1
DCLK2	20p-Amp	0.845	1
DCLK2	Del_8p23.2	0.845	1
NEXN	12p-Amp	0.845	1
12p-Amp	Del_3q26.31	0.845	1
4q-Del	Amp_19q12	0.845	1
Amp_11p15.5	Del_3q26.31	0.845	1
Amp_19q12	Del_1p13.2	0.845	1
ACVR1B	22q-Del	0.846	1
FBXW7	Amp_5p12	0.846	1
TPRKB	Amp_13q12.2	0.846	1
ASXL1	20p-Del	0.846	1
PIK3R1	7q-Amp	0.846	1
ARID1A	1p-Del	0.847	1
IFT57	Amp_13q12.2	0.847	1
RLIM	Del_15q11.2	0.847	1
MPHOSPH10	Del_15q11.2	0.847	1
RB1	Del_4q22.1	0.847	1
TOP2B	7q-Amp	0.847	1
Amp_12p13.33	Del_6p25.3	0.847	1
CDH1	8p-Del	0.848	1
FMN2	Amp_13q12.2	0.848	1
GGT1	SMAD4	0.848	1
THOC7	Del_8p22	0.848	1
ERBB2	13q-Amp	0.848	1
RSPH3	Del_8p22	0.848	1
RLIM	4p-Del	0.848	1
SMAD4	21q-Del	0.848	1
SLC26A8	Del_15q21.1	0.848	1
FKBP9	Del_15q21.1	0.848	1
Del_15q21.1	Del_16p13.3	0.848	1
APC	BMPR2	0.849	1
PRKDC	Del_10q23.31	0.849	1
RPTN	7q-Amp	0.849	1
ERBB2	Amp_20p11.21	0.849	1
RBPJ	7q-Amp	0.849	1
8p-Del	Del_12p13.1	0.849	1
Amp_10q22.3	Del_18p11.31	0.849	1
CDH1	Amp_5p12	0.85	1
PTCH1	Amp_15q26.1	0.85	1
PLAGL2	Amp_20p12.1	0.85	1
IFT57	Amp_13q22.1	0.85	1
RB1	2p-Amp	0.85	1
RB1	2q-Amp	0.85	1
PTEN	Del_10q25.2	0.85	1
Amp_12p13.33	Del_14q11.2	0.85	1
Amp_16p11.2	Del_15q21.1	0.85	1
APC	EGR1	0.851	1
RB1	Amp_13q12.2	0.851	1
SETD2	Del_5q22.2	0.851	1
CTNNB1	Amp_8q24.21	0.851	1
17p-Del	Amp_1q31.1	0.851	1
SOX9	ZBTB20	0.852	1
SOX9	MAP4K3	0.852	1
SOX9	17q-Amp	0.852	1
MGA	5q-Del	0.852	1
MGA	Amp_19q12	0.852	1
TPRKB	Del_15q11.2	0.852	1
ZBTB20	Del_5q23.3	0.852	1
ERBB2	Del_6p25.3	0.852	1
ERBB2	Del_19p13.3	0.852	1
IQCD	Del_4q22.1	0.852	1
ASXL1	4p-Del	0.852	1
BMPR2	Amp_8q24.21	0.852	1
NEXN	Del_5q12.1	0.852	1
ZNF486	Del_4q22.1	0.852	1
17q-Amp	Del_5q23.3	0.852	1
4p-Del	Amp_17q12	0.852	1
Amp_1q31.1	Del_18q12.2	0.852	1
Amp_2q33.1	Del_5q12.1	0.852	1
Amp_11p15.5	Del_15q21.1	0.852	1
Amp_19q12	Del_5q12.1	0.852	1
ACVR1B	9p-Amp	0.853	1
CDH1	Del_10q23.31	0.853	1
PIK3R1	18q-Del	0.853	1
RB1	17q-Amp	0.853	1
FKBP9	Amp_8p11.23	0.853	1
KDM6A	12q-Amp	0.853	1
13q-Amp	Del_6p25.3	0.853	1
CRIPAK	Amp_13q12.13	0.854	1
MGA	Amp_17q24.1	0.854	1
NEXN	Amp_8p11.21	0.854	1
Amp_10q22.3	Del_5q22.2	0.854	1
Amp_12p13.33	Del_5q21.2	0.854	1
Amp_17q24.1	Del_5q12.1	0.854	1
FMN2	14q-Del	0.855	1
OR4D10	22q-Del	0.855	1
NF1	Del_8p22	0.855	1
PTCH1	Amp_16p11.2	0.855	1
PIK3R1	9p-Amp	0.855	1
PIK3R1	Del_10q21.1	0.855	1
DDX26B	22q-Del	0.855	1
CTNNB1	Del_3p26.3	0.855	1
Amp_20q11.21	Del_6p25.3	0.855	1
Del_1p36.11	Del_16q23.1	0.855	1
FMN2	22q-Del	0.856	1
CHUK	Del_4q35.1	0.856	1
GRB2	Del_1p36.11	0.856	1
RSPH3	Del_1p36.11	0.856	1
IDH1	13q-Amp	0.856	1
Amp_5p12	Del_10q25.2	0.856	1
MLH1	4p-Del	0.857	1
BCL9	Del_15q11.2	0.857	1
ASXL1	Del_16p13.3	0.857	1
SLC26A8	Amp_17q12	0.857	1
BCORL1	Del_15q11.2	0.857	1
ATM	8p-Del	0.857	1
Amp_8p11.23	Del_15q11.2	0.857	1
FAM123B	Del_1p33	0.858	1
SOX9	20p-Amp	0.858	1
ATXN3L	Del_1p36.11	0.858	1
NR1H3	RB1	0.858	1
PTCH1	PCBP1	0.858	1
GRB2	Del_18p11.31	0.858	1
PCBP1	RB1	0.858	1
RSPH3	Del_18p11.31	0.858	1
RB1	16q-Amp	0.858	1
L1TD1	Del_1p36.11	0.858	1
CDK12	Amp_8q24.21	0.858	1
NEXN	Del_1p36.11	0.858	1
NEXN	Del_3p14.2	0.858	1
8q-Amp	Del_22q13.32	0.858	1
Amp_2q33.1	Del_1p36.11	0.858	1
Amp_8p11.21	Amp_11p15.5	0.858	1
Amp_8p11.21	Del_1p13.2	0.858	1
CRIPAK	Del_18q12.2	0.859	1
NF1	5q-Del	0.859	1
NF1	Amp_19q12	0.859	1
ZBTB20	12p-Amp	0.859	1
HIST1H1T	Amp_20q13.12	0.859	1
IDH1	Amp_11p15.5	0.859	1
CTNNB1	Del_4p16.1	0.859	1
17q-Amp	4q-Del	0.859	1
ZFP36L2	Del_17p12	0.86	1
TXNDC2	Del_1p33	0.86	1
FAM9A	Del_15q15.2	0.86	1
FBXW7	7q-Amp	0.86	1
ATXN3L	Del_17p12	0.86	1
PLEKHF2	14q-Del	0.86	1
C2orf29	Amp_13q22.1	0.86	1
TOP2B	Del_1p33	0.86	1
TOP2B	Del_4q22.1	0.86	1
7p-Amp	Amp_11p15.5	0.86	1
Amp_8p11.23	Amp_11p15.5	0.86	1
Amp_19q12	Del_17p12	0.86	1
IQCD	Del_4q35.1	0.861	1
C2orf29	Amp_8q24.21	0.861	1
SLC26A8	Amp_8q24.21	0.861	1
CTNNB1	Amp_1q31.1	0.861	1
CTNNB1	Amp_17q24.1	0.861	1
20p-Del	Amp_16p11.2	0.861	1
Amp_17q24.1	Del_5q22.2	0.861	1
SMAD2	Del_21q11.2	0.862	1
CHUK	Del_15q22.33	0.862	1
MGA	Del_4q22.1	0.862	1
PTEN	4p-Del	0.862	1
CREBBP	Amp_6p21.1	0.862	1
CREBBP	Del_3p26.3	0.862	1
CRIPAK	12q-Amp	0.863	1
CRIPAK	9p-Amp	0.863	1
CRIPAK	Del_10q21.1	0.863	1
RNF43	SELPLG	0.863	1
FAM123B	Del_4q35.1	0.863	1
MVK	Amp_12p13.33	0.863	1
ST3GAL6	20p-Amp	0.863	1
PLEKHF2	20p-Amp	0.863	1
PLEKHF2	Del_8p23.2	0.863	1
ALPK2	Del_5q22.2	0.863	1
DIP2B	Del_17q24.3	0.863	1
PRRG1	15q-Del	0.863	1
RLIM	8q-Amp	0.863	1
SMAD4	Amp_6p21.1	0.863	1
FKBP9	4p-Del	0.863	1
8q-Amp	1p-Del	0.863	1
Amp_6p21.1	Del_10q23.31	0.863	1
CRIPAK	Amp_8q24.21	0.864	1
ACVR1B	7p-Amp	0.864	1
ACVR1B	8q-Amp	0.864	1
FAM9A	Del_14q11.2	0.864	1
FAM9A	Del_15q21.1	0.864	1
FBXW7	Del_15q22.33	0.864	1
RSPH3	Del_14q11.2	0.864	1
Del_2q22.1	Del_14q11.2	0.864	1
CRIPAK	8p-Del	0.865	1
TP53	SLC12A6	0.865	1
SOX9	SMAD2	0.865	1
SOX9	Del_12p13.1	0.865	1
WNT1	7p-Amp	0.865	1
WNT1	8q-Amp	0.865	1
NF2	12p-Amp	0.865	1
RHOA	CREBBP	0.865	1
RHOA	20q-Amp	0.865	1
RHOA	Del_15q22.33	0.865	1
IQCD	Del_15q22.33	0.865	1
ALG12	7p-Amp	0.865	1
SMAD4	12q-Amp	0.865	1
SETD2	5q-Del	0.865	1
SETD2	Amp_2q33.1	0.865	1
SETD2	Amp_19q12	0.865	1
MGA	17q-Amp	0.866	1
BCL9	Del_5q22.2	0.866	1
ZBTB20	Del_5q12.1	0.866	1
ERBB2	Del_15q15.2	0.866	1
PCBP1	20q-Amp	0.866	1
SMAD4	Del_4q22.1	0.866	1
RB1	Del_10q23.31	0.866	1
DCLK2	20q-Amp	0.866	1
SETD2	Amp_8q24.21	0.866	1
SLC12A6	Del_5q22.2	0.866	1
CTNNB1	Del_17q24.3	0.866	1
17q-Amp	Del_5q12.1	0.866	1
Amp_1q31.1	Del_15q15.2	0.866	1
TP53	GRB2	0.867	1
ZFP36L2	20q-Amp	0.867	1
CDH1	20p-Del	0.867	1
FAM9A	Amp_8p11.23	0.867	1
TPRKB	Amp_13q12.13	0.867	1
NLRC4	Del_10q25.2	0.867	1
PCBP1	18q-Del	0.867	1
RSPH3	Amp_8p11.23	0.867	1
RBPJ	21q-Del	0.867	1
RBPJ	Del_5q21.2	0.867	1
RBBP7	21q-Del	0.867	1
HLA-A	21q-Del	0.867	1
16p-Amp	21q-Del	0.867	1
16p-Amp	Del_5q21.2	0.867	1
8p-Amp	Del_8p22	0.867	1
Amp_11p15.5	Del_5q21.2	0.867	1
RLIM	17p-Del	0.868	1
MAPK6	8p-Amp	0.869	1
MAPK6	Del_8p23.2	0.869	1
IQCD	Del_22q13.32	0.869	1
C2orf29	20p-Amp	0.869	1
C2orf29	8p-Amp	0.869	1
FKBP9	8p-Amp	0.869	1
FKBP9	Del_15q11.2	0.869	1
PRPS1	20q-Amp	0.869	1
TPRKB	7q-Amp	0.87	1
ASXL1	Del_10q25.2	0.87	1
RSPH3	Del_17p12	0.87	1
ATM	Amp_5p12	0.87	1
Amp_5p12	Del_21q21.1	0.87	1
Amp_8q24.21	Del_14q11.2	0.87	1
ACVR1B	20p-Del	0.871	1
ASXL1	Amp_2q33.1	0.871	1
IFT57	Amp_13q12.13	0.871	1
SMAD4	FYN	0.871	1
L1TD1	Amp_17q12	0.871	1
BMPR2	Del_21q21.1	0.871	1
KDM6A	20p-Del	0.871	1
20p-Del	Del_16q23.1	0.871	1
Amp_5p12	Del_1p33	0.871	1
SMAD2	4q-Del	0.872	1
SMAD2	Del_1p13.2	0.872	1
NF2	Del_6p25.3	0.872	1
RHOA	7p-Amp	0.872	1
RHOA	8q-Amp	0.872	1
RPTN	22q-Del	0.872	1
ERBB2	Amp_13q22.1	0.872	1
IQCD	7p-Amp	0.872	1
IQCD	8q-Amp	0.872	1
PRRG1	Del_4q22.1	0.872	1
PIK3R1	Amp_8p11.23	0.872	1
IFT57	7p-Amp	0.872	1
RBPJ	22q-Del	0.872	1
RBPJ	Del_4p16.1	0.872	1
HLA-A	Del_4p16.1	0.872	1
LARP4B	Del_10q21.1	0.872	1
SETD2	Amp_1q31.1	0.872	1
CDK12	Amp_8p11.21	0.872	1
CTNNB1	16p-Amp	0.872	1
12p-Amp	Del_12p13.1	0.872	1
12q-Amp	Del_17q24.3	0.872	1
9p-Amp	Del_17q24.3	0.872	1
Amp_8p11.23	Del_21q21.1	0.872	1
BCOR	Del_4p16.1	0.873	1
OR4D10	Del_18q22.1	0.873	1
PRKDC	Del_3p26.3	0.873	1
RPTN	Del_18q12.2	0.873	1
ATXN3L	Amp_8p11.23	0.873	1
TPRKB	17p-Del	0.873	1
ERBB2	Del_15q21.1	0.873	1
PCBP1	Del_5q22.2	0.873	1
NEXN	Amp_8p11.23	0.873	1
BIRC3	Del_5q22.2	0.873	1
16q-Amp	Del_5q22.2	0.873	1
Amp_1q31.1	Del_15q21.1	0.873	1
CRIPAK	20p-Amp	0.874	1
CRIPAK	Del_8p23.2	0.874	1
ACVR1B	Amp_8p11.23	0.874	1
BCL9	Amp_1q31.1	0.874	1
ERBB2	BCORL1	0.874	1
SMAD4	Del_5q12.1	0.874	1
BCORL1	Amp_1q31.1	0.874	1
SLC12A6	Amp_1q31.1	0.874	1
CREBBP	4q-Del	0.874	1
CREBBP	Del_1p13.2	0.874	1
CTNNB1	Del_5q12.1	0.874	1
Amp_8p11.23	Del_16q23.1	0.874	1
Amp_8p11.23	Del_21q11.2	0.874	1
Amp_8q24.21	Del_21q21.1	0.874	1
PTEN	2q-Amp	0.875	1
12p-Amp	Del_4p16.1	0.875	1
6p-Amp	Del_18p11.31	0.875	1
8q-Amp	Del_14q11.2	0.875	1
Amp_11p15.5	Del_4p16.1	0.875	1
Amp_13q12.2	Del_16q23.1	0.875	1
Amp_16p11.2	Del_15q11.2	0.875	1
FMN2	17p-Del	0.876	1
PRKDC	Del_5q23.3	0.876	1
PTEN	20p-Del	0.876	1
SLC12A6	Amp_20p12.1	0.876	1
15q-Del	Amp_17q24.1	0.876	1
APC	8p-Amp	0.877	1
RNF43	Amp_19q12	0.877	1
RNF43	Del_3q26.31	0.877	1
SOX9	Del_3p26.3	0.877	1
CDH1	Del_4p16.1	0.877	1
ATXN3L	4p-Del	0.877	1
ALG12	20q-Amp	0.877	1
PTCH1	Del_15q11.2	0.877	1
C11orf30	Del_5q23.3	0.877	1
RB1	13q-Amp	0.877	1
RB1	Del_15q11.2	0.877	1
C14orf184	20q-Amp	0.877	1
MAP4K3	Del_1p36.11	0.877	1
NEXN	4p-Del	0.877	1
IDH1	Del_1p36.11	0.877	1
4p-Del	Amp_2q33.1	0.877	1
4p-Del	Amp_19q12	0.877	1
Amp_16p11.2	Del_10q25.2	0.877	1
Del_3p26.3	Del_5q23.3	0.877	1
ARID1A	THOC7	0.878	1
ARID1A	Del_2q22.1	0.878	1
CRIPAK	Del_15q15.2	0.878	1
SMAD2	Del_5q12.1	0.878	1
STARD3NL	Amp_8p11.21	0.878	1
NF2	Del_1p36.11	0.878	1
NF2	Del_5q12.1	0.878	1
FAM9A	Del_15q11.2	0.878	1
EGR1	Amp_20p12.1	0.878	1
MGA	Del_5q21.2	0.878	1
MGA	Del_12p13.1	0.878	1
BCL9	Amp_12p13.33	0.878	1
ERBB2	Amp_8q24.21	0.878	1
P2RY13	Del_8p22	0.878	1
PLEKHF2	Amp_20p12.1	0.878	1
NR1H3	Amp_8p11.21	0.878	1
NR1H3	Del_8p22	0.878	1
NLRC4	15q-Del	0.878	1
NLRC4	Amp_12p13.33	0.878	1
IDH1	Del_18p11.31	0.878	1
CREBBP	Del_6p25.3	0.878	1
CREBBP	Del_19p13.3	0.878	1
FMN2	Del_18p11.31	0.879	1
NF1	Amp_13q22.1	0.879	1
C11orf30	Del_21q11.2	0.879	1
VCX2	Del_1p36.11	0.879	1
GMPS	Amp_20p11.21	0.879	1
Amp_13q22.1	Del_16q23.1	0.879	1
CRIPAK	20p-Del	0.88	1
MLH1	Amp_20p11.21	0.88	1
ATXN3L	18p-Del	0.88	1
ALPK2	Amp_1q31.1	0.88	1
ASXL1	Amp_1q31.1	0.88	1
NEXN	Amp_20p11.21	0.88	1
CTNNB1	Del_14q11.2	0.88	1
13q-Amp	Del_16q23.1	0.88	1
Amp_16p11.2	Del_5q22.2	0.88	1
FAM123B	ACVR1B	0.881	1
RHOA	14q-Del	0.881	1
RPTN	Amp_20p12.1	0.881	1
ASXL1	7q-Amp	0.881	1
GRB2	Amp_20q11.21	0.881	1
NLRC4	Del_8p23.2	0.881	1
SMAD4	Del_2p12	0.881	1
RBBP7	Amp_20p12.1	0.881	1
PTEN	12p-Amp	0.881	1
PTEN	Del_1p13.2	0.881	1
IDH1	Del_15q15.2	0.881	1
ZNF486	14q-Del	0.881	1
12p-Amp	Del_8p23.2	0.881	1
17q-Amp	Del_15q15.2	0.881	1
FBXW7	9p-Amp	0.882	1
NLRC4	Del_1p33	0.882	1
PCBP1	15q-Del	0.882	1
PCBP1	Amp_12p13.33	0.882	1
PIK3R1	Amp_17q12	0.882	1
RLIM	21q-Del	0.882	1
MPHOSPH10	Del_5q21.2	0.882	1
RB1	Del_7q31.1	0.882	1
DCLK2	15q-Del	0.882	1
FYN	15q-Del	0.882	1
FYN	Amp_12p13.33	0.882	1
BCORL1	Del_1p33	0.882	1
GPATCH8	Amp_12p13.33	0.882	1
SLC12A6	Del_1p33	0.882	1
BIRC3	15q-Del	0.882	1
BIRC3	Amp_12p13.33	0.882	1
Amp_20q12	Del_6p25.3	0.882	1
ARID1A	Amp_11p15.5	0.883	1
ARID1A	Del_1p13.2	0.883	1
TP53	Del_16q23.1	0.883	1
FAM123B	7q-Amp	0.883	1
TXNDC2	Del_22q13.32	0.883	1
EGR1	Del_15q15.2	0.883	1
FBXW7	Del_5q22.2	0.883	1
CHUK	12p-Amp	0.883	1
CHUK	4q-Del	0.883	1
CHUK	Amp_20p11.21	0.883	1
CHUK	Del_1p13.2	0.883	1
ATXN3L	8p-Amp	0.883	1
ST3GAL6	Del_15q15.2	0.883	1
PLEKHF2	Del_15q15.2	0.883	1
C11orf30	Amp_11p15.5	0.883	1
C11orf30	Del_1p13.2	0.883	1
DIP2B	8p-Del	0.883	1
PCBP1	Amp_20q11.21	0.883	1
PIK3R1	Del_18q21.2	0.883	1
ROS1	21q-Del	0.883	1
L1TD1	8p-Amp	0.883	1
PRPS1	Amp_20q11.21	0.883	1
12p-Amp	Del_3p26.3	0.883	1
Amp_11p15.5	Del_3p26.3	0.883	1
APC	Del_6q26	0.884	1
CRIPAK	Del_15q21.1	0.884	1
SMAD2	Del_3p14.2	0.884	1
THOC7	Amp_20p11.21	0.884	1
BCL9	Del_21q21.1	0.884	1
GRB2	Amp_20p11.21	0.884	1
RSPH3	18p-Del	0.884	1
RSPH3	Amp_20p11.21	0.884	1
ROS1	4q-Del	0.884	1
ROS1	Amp_11p15.5	0.884	1
ROS1	Del_1p13.2	0.884	1
TOP2B	7p-Amp	0.884	1
SLC12A6	Del_21q21.1	0.884	1
CRIPAK	7p-Amp	0.885	1
CDH1	Del_2q22.1	0.885	1
PRRG1	Del_15q22.33	0.885	1
RBBP7	8p-Del	0.885	1
BCORL1	7q-Amp	0.885	1
CDK12	14q-Del	0.885	1
9p-Amp	22q-Del	0.885	1
9p-Amp	Del_4p16.1	0.885	1
Amp_5p12	Del_10q23.31	0.885	1
ACVR1B	Del_10q25.2	0.886	1
CDH1	Amp_16p11.2	0.886	1
EGR1	Del_15q21.1	0.886	1
RPTN	Amp_20q11.21	0.886	1
NF1	Del_14q11.2	0.886	1
ZBTB20	Del_15q21.1	0.886	1
PLEKHF2	Del_14q11.2	0.886	1
PLEKHF2	Del_15q21.1	0.886	1
NR1H3	Del_21q21.1	0.886	1
PCBP1	Del_21q21.1	0.886	1
RBPJ	Amp_20q11.21	0.886	1
DCLK2	Del_21q21.1	0.886	1
GPATCH8	Del_21q21.1	0.886	1
IDH1	Del_15q21.1	0.886	1
17q-Amp	Del_15q21.1	0.886	1
Amp_8p11.23	Del_15q21.1	0.886	1
ARID1A	5q-Del	0.887	1
ARID1A	Amp_2q33.1	0.887	1
ARID1A	Amp_19q12	0.887	1
FMN2	8q-Amp	0.887	1
DIP2B	Del_1p36.11	0.887	1
RLIM	Del_4p16.1	0.887	1
NEXN	Del_15q11.2	0.887	1
ATM	20p-Del	0.887	1
Amp_19q12	Del_15q11.2	0.887	1
Amp_20p12.1	Del_22q13.32	0.887	1
APC	WNT1	0.888	1
SOX9	Del_6p25.3	0.888	1
SOX9	Del_19p13.3	0.888	1
TXNDC2	Del_5q23.3	0.888	1
CDH1	Del_15q22.33	0.888	1
MAPK6	7p-Amp	0.888	1
ASXL1	Amp_8q24.21	0.888	1
ASXL1	Del_21q21.1	0.888	1
ALG12	Amp_20q11.21	0.888	1
PTCH1	Del_15q22.33	0.888	1
PCBP1	Del_18p11.31	0.888	1
SMAD4	Del_18q12.2	0.888	1
SLC26A8	8q-Amp	0.888	1
TOP2B	Del_5q23.3	0.888	1
FKBP9	8q-Amp	0.888	1
FYN	Del_18p11.31	0.888	1
ALDH1A3	7p-Amp	0.888	1
ALDH1A3	8q-Amp	0.888	1
BIRC3	Del_18p11.31	0.888	1
Del_5q23.3	Del_6q26	0.888	1
CRIPAK	Amp_8p11.23	0.889	1
ZFP36L2	Amp_13q12.2	0.889	1
BCOR	20p-Del	0.889	1
PRKDC	Del_6q26	0.889	1
DIP2B	20p-Del	0.889	1
DDX26B	Del_5q22.2	0.889	1
LARP4B	20p-Del	0.889	1
CDK12	9p-Amp	0.889	1
PTGDR	Del_8p23.2	0.889	1
8q-Amp	21q-Del	0.889	1
Amp_6p21.1	Del_5q12.1	0.889	1
Amp_10q22.3	Amp_13q12.2	0.889	1
Del_8p22	Del_16q23.1	0.889	1
APC	NR1H3	0.89	1
ARID1A	Del_15q11.2	0.89	1
PRKDC	Amp_8p11.21	0.89	1
BCL9	Del_4q22.1	0.89	1
P2RY13	Del_4q22.1	0.89	1
ALPK2	Del_1p33	0.89	1
DIP2B	Amp_8q24.21	0.89	1
DCLK2	Del_4q22.1	0.89	1
PTEN	22q-Del	0.89	1
PTEN	Del_4p16.1	0.89	1
LARP4B	Amp_8q24.21	0.89	1
MAP4K3	4p-Del	0.89	1
IDH1	4p-Del	0.89	1
16q-Amp	Del_4q22.1	0.89	1
Amp_8q24.21	Del_21q11.2	0.89	1
APC	RNF43	0.891	1
WNT1	Amp_20p12.1	0.891	1
NF2	Del_5q21.2	0.891	1
ALPK2	Del_1p36.11	0.891	1
PIK3R1	Del_21q11.2	0.891	1
C14orf184	Amp_20p12.1	0.891	1
4p-Del	Amp_12p13.33	0.891	1
Amp_16p11.2	Del_1p33	0.891	1
TP53	Del_2p12	0.892	1
TXNDC2	Del_17p12	0.892	1
CDH1	Amp_13q12.2	0.892	1
PRKDC	Amp_10q22.3	0.892	1
PTCH1	Del_14q11.2	0.892	1
DIP2B	Del_15q15.2	0.892	1
RSPH3	Amp_13q12.2	0.892	1
ROS1	1p-Del	0.892	1
ROS1	22q-Del	0.892	1
ROS1	Del_4p16.1	0.892	1
SMAD4	Amp_2q33.1	0.892	1
RB1	Del_14q11.2	0.892	1
IDH1	18q-Del	0.892	1
IDH1	Amp_20q11.21	0.892	1
CREBBP	Amp_5p12	0.892	1
ZFP36L2	Amp_13q22.1	0.893	1
ACVR1B	Del_5q22.2	0.893	1
ATXN3L	PIK3R1	0.893	1
PTCH1	15q-Del	0.893	1
IDH1	Del_18q21.2	0.893	1
CTNNB1	Amp_5p12	0.893	1
KDM6A	Amp_17q24.1	0.893	1
Amp_1q31.1	Del_16q23.1	0.893	1
TXNDC2	12p-Amp	0.894	1
TXNDC2	Del_1p13.2	0.894	1
MLH1	Amp_8p11.23	0.894	1
FMN2	8p-Amp	0.894	1
RHOA	Amp_8q24.21	0.894	1
FAM9A	7q-Amp	0.894	1
ROS1	Del_4q22.1	0.894	1
RB1	Del_3p26.3	0.894	1
TOP2B	Amp_11p15.5	0.894	1
HIST1H1T	8p-Del	0.894	1
12p-Amp	Del_6p25.3	0.894	1
APC	Amp_11p15.5	0.895	1
ARID1A	Del_5q12.1	0.895	1
TP53	FAM123B	0.895	1
SELPLG	Del_5q21.2	0.895	1
MAPK6	21q-Del	0.895	1
MAPK6	Del_5q21.2	0.895	1
BCL9	Del_10q23.31	0.895	1
RSPH3	Amp_13q22.1	0.895	1
RLIM	Amp_20q13.12	0.895	1
C2orf29	13q-Amp	0.895	1
C2orf29	Del_5q21.2	0.895	1
SLC26A8	21q-Del	0.895	1
FKBP9	Del_5q21.2	0.895	1
ALDH1A3	21q-Del	0.895	1
ALDH1A3	Del_5q21.2	0.895	1
PTGDR	Del_18q22.1	0.895	1
Del_16q23.1	Del_18q21.2	0.895	1
FAM123B	16p-Amp	0.896	1
CDH1	4q-Del	0.896	1
CDH1	Amp_19q12	0.896	1
CDH1	Del_3q26.31	0.896	1
CDH1	Del_10q25.2	0.896	1
SELPLG	17p-Del	0.896	1
SELPLG	Del_18q22.1	0.896	1
NF2	Del_14q11.2	0.896	1
ALPK2	Del_4q22.1	0.896	1
ASXL1	Del_12p13.1	0.896	1
PCBP1	Del_18q12.2	0.896	1
C2orf29	Del_18q22.1	0.896	1
6p-Amp	18p-Del	0.896	1
TP53	Amp_19q12	0.897	1
NF1	Del_3p14.2	0.897	1
FBXW7	Del_8p22	0.897	1
ERBB2	Del_17p12	0.897	1
SETD2	Del_5q21.2	0.897	1
12q-Amp	20p-Del	0.897	1
Amp_1q31.1	Del_17p12	0.897	1
ARID1A	Del_21q21.1	0.898	1
OR4D10	15q-Del	0.898	1
NF2	Del_8p22	0.898	1
BCL9	Amp_13q12.2	0.898	1
ERBB2	Del_15q11.2	0.898	1
P2RY13	17p-Del	0.898	1
P2RY13	Del_4q35.1	0.898	1
GRB2	Amp_20q12	0.898	1
DIP2B	Del_15q21.1	0.898	1
PRRG1	7p-Amp	0.898	1
PCBP1	Del_4q35.1	0.898	1
DDX26B	Amp_12p13.33	0.898	1
DCLK2	17p-Del	0.898	1
DCLK2	Del_4q35.1	0.898	1
LARP4B	Del_15q21.1	0.898	1
GPATCH8	Del_4q35.1	0.898	1
BIRC3	17p-Del	0.898	1
BIRC3	Del_4q35.1	0.898	1
16q-Amp	Del_4q35.1	0.898	1
TXNDC2	14q-Del	0.899	1
CDH1	Amp_13q22.1	0.899	1
FMN2	Amp_13q12.13	0.899	1
RHOA	Del_1p36.11	0.899	1
EGR1	Del_15q11.2	0.899	1
IQCD	Del_1p36.11	0.899	1
IQCD	Del_8p23.2	0.899	1
PLEKHF2	Del_15q11.2	0.899	1
DIP2B	20p-Amp	0.899	1
IFT57	Del_1p36.11	0.899	1
NEXN	20p-Amp	0.899	1
CREBBP	Del_5q21.2	0.899	1
12q-Amp	8p-Del	0.899	1
20p-Amp	5q-Del	0.899	1
ACVR1B	Del_1p33	0.9	1
MAPK6	Del_4p16.1	0.9	1
PTCH1	Del_22q13.32	0.9	1
NLRC4	Del_4q35.1	0.9	1
PRRG1	14q-Del	0.9	1
PCBP1	Del_17p12	0.9	1
PIK3R1	Del_10q25.2	0.9	1
C2orf29	22q-Del	0.9	1
RB1	Del_22q13.32	0.9	1
TOP2B	Del_5q12.1	0.9	1
FKBP9	Del_4p16.1	0.9	1
BCORL1	Del_4q35.1	0.9	1
SLC12A6	Del_4q35.1	0.9	1
12q-Amp	Del_1p36.11	0.9	1
14q-Del	Amp_10q22.3	0.9	1
Del_5q12.1	Del_6p25.3	0.9	1
RNF43	Del_12p13.1	0.901	1
SMAD2	4p-Del	0.901	1
SELPLG	Del_8p22	0.901	1
NF2	8p-Del	0.901	1
MAPK6	Del_8p22	0.901	1
FBXW7	1p-Del	0.901	1
ALG12	Amp_20q12	0.901	1
PTCH1	4p-Del	0.901	1
12p-Amp	17p-Del	0.901	1
21q-Del	Amp_8q24.21	0.901	1
CRIPAK	Amp_13q12.2	0.902	1
TP53	P2RY13	0.902	1
TP53	PCBP1	0.902	1
TP53	DCLK2	0.902	1
RHOA	Del_15q15.2	0.902	1
BCL9	Amp_13q22.1	0.902	1
IQCD	Del_15q15.2	0.902	1
PCBP1	Amp_20q12	0.902	1
PCBP1	Del_15q22.33	0.902	1
DCLK2	Amp_20q12	0.902	1
DCLK2	Del_15q22.33	0.902	1
BIRC3	Del_15q22.33	0.902	1
CREBBP	16q-Amp	0.902	1
12p-Amp	Del_1p13.2	0.902	1
Amp_8p11.21	Del_21q11.2	0.902	1
BCOR	7p-Amp	0.903	1
BCOR	Amp_8p11.23	0.903	1
BCOR	Del_10q25.2	0.903	1
FMN2	Del_10q23.31	0.903	1
NF2	Amp_1q31.1	0.903	1
SMAD4	Del_18q21.2	0.903	1
RB1	16p-Amp	0.903	1
ATM	Del_14q11.2	0.903	1
12p-Amp	18q-Del	0.903	1
TP53	2p-Amp	0.904	1
CDH1	15q-Del	0.904	1
MLH1	Amp_20q12	0.904	1
MLH1	Del_17q24.3	0.904	1
FBXW7	Del_15q21.1	0.904	1
ZBTB20	Del_15q11.2	0.904	1
PTCH1	8p-Del	0.904	1
PIK3R1	Amp_8q24.21	0.904	1
RBPJ	Del_5q22.2	0.904	1
PTEN	Del_22q13.32	0.904	1
HLA-A	Del_5q22.2	0.904	1
ATM	Del_2p12	0.904	1
IDH1	Del_15q11.2	0.904	1
KDM6A	Amp_12p13.33	0.904	1
17q-Amp	Del_15q11.2	0.904	1
Amp_13q12.13	Del_16q23.1	0.904	1
APC	Amp_17q12	0.905	1
CRIPAK	13q-Amp	0.905	1
FMN2	18q-Del	0.905	1
OR4D10	18q-Del	0.905	1
RPTN	Amp_20q12	0.905	1
FBXW7	Amp_6p21.1	0.905	1
BCL9	Del_15q22.33	0.905	1
P2RY13	Del_22q13.32	0.905	1
NLRC4	Del_15q22.33	0.905	1
PIK3R1	17q-Amp	0.905	1
RBPJ	Amp_20q12	0.905	1
RBBP7	Amp_8q24.21	0.905	1
DCLK2	Del_22q13.32	0.905	1
FYN	Del_22q13.32	0.905	1
SETD2	Amp_8p11.21	0.905	1
CDK12	20p-Del	0.905	1
1p-Del	Amp_20p12.1	0.905	1
CRIPAK	Amp_13q22.1	0.906	1
FAM123B	FMN2	0.906	1
SELPLG	Del_18q21.2	0.906	1
RHOA	Amp_20p12.1	0.906	1
RHOA	Del_14q11.2	0.906	1
CHUK	Amp_17q12	0.906	1
IQCD	Amp_20p12.1	0.906	1
IQCD	Del_15q21.1	0.906	1
ASXL1	21q-Del	0.906	1
C11orf30	Amp_17q12	0.906	1
PIK3R1	8p-Del	0.906	1
IFT57	Amp_20p12.1	0.906	1
RSPH3	17p-Del	0.906	1
C2orf29	Del_18q21.2	0.906	1
SOX9	BCL9	0.907	1
NF2	14q-Del	0.907	1
ASXL1	Del_10q23.31	0.907	1
C11orf30	Del_1p36.11	0.907	1
L1TD1	Del_5q21.2	0.907	1
SLC12A6	Del_5q23.3	0.907	1
NEXN	21q-Del	0.907	1
21q-Del	Amp_2q33.1	0.907	1
Amp_19q12	Del_5q21.2	0.907	1
CRIPAK	Del_1p33	0.908	1
FAM123B	8q-Amp	0.908	1
CDH1	Del_15q11.2	0.908	1
FMN2	Del_8q11.1	0.908	1
ATXN3L	8q-Amp	0.908	1
PIK3R1	Del_18q12.2	0.908	1
NEXN	7p-Amp	0.908	1
NEXN	7q-Amp	0.908	1
8p-Amp	Del_21q21.1	0.908	1
ACVR1B	Del_21q21.1	0.909	1
CDH1	Amp_1q31.1	0.909	1
CDH1	Amp_17q24.1	0.909	1
MLH1	1p-Del	0.909	1
FMN2	8p-Del	0.909	1
FAM9A	Amp_13q12.13	0.909	1
IFT57	Amp_8p11.23	0.909	1
RSPH3	Amp_13q12.13	0.909	1
SMAD4	Del_21q21.1	0.909	1
SLC12A6	13q-Amp	0.909	1
PTGDR	Del_8p22	0.909	1
CREBBP	Amp_1q31.1	0.909	1
12p-Amp	Del_5q12.1	0.909	1
Amp_10q22.3	Amp_13q12.13	0.909	1
ARID1A	14q-Del	0.91	1
BCOR	Amp_1q31.1	0.91	1
PRKDC	Del_3p14.2	0.91	1
BCL9	Del_22q13.32	0.91	1
ALPK2	Del_4q35.1	0.91	1
DIP2B	Amp_1q31.1	0.91	1
SMAD4	Amp_5p12	0.91	1
TOP2B	Amp_20p11.21	0.91	1
BCORL1	Del_22q13.32	0.91	1
SETD2	Del_6q26	0.91	1
22q-Del	Amp_20p12.1	0.91	1
ZFP36L2	Del_18q22.1	0.911	1
FMN2	Amp_13q22.1	0.911	1
RPTN	Amp_12p13.33	0.911	1
RPTN	Del_18q22.1	0.911	1
PTCH1	Del_6p25.3	0.911	1
PTCH1	Del_19p13.3	0.911	1
ROS1	20p-Del	0.911	1
MPHOSPH10	Amp_20p11.21	0.911	1
RBBP7	Amp_12p13.33	0.911	1
RBBP7	Del_8p23.2	0.911	1
BMPR2	9p-Amp	0.911	1
GMPS	Amp_12p13.33	0.911	1
GMPS	Amp_13q12.13	0.911	1
TP53	SMAD2	0.912	1
FAM123B	4q-Del	0.912	1
ACVR1B	Del_10q23.31	0.912	1
MLH1	4q-Del	0.912	1
CHUK	Del_15q15.2	0.912	1
NR1H3	Del_21q11.2	0.912	1
C11orf30	Del_15q15.2	0.912	1
PCBP1	Del_21q11.2	0.912	1
ROS1	Del_15q15.2	0.912	1
DCLK2	Del_21q11.2	0.912	1
GPATCH8	Del_21q11.2	0.912	1
NEXN	Del_4p16.1	0.912	1
ATM	Amp_6p21.1	0.912	1
CTNNB1	20p-Del	0.912	1
22q-Del	Amp_2q33.1	0.912	1
22q-Del	Amp_19q12	0.912	1
Amp_2q33.1	Del_4p16.1	0.912	1
CRIPAK	Del_8p22	0.913	1
SELPLG	18q-Del	0.913	1
NF2	Del_1p33	0.913	1
PRKDC	21q-Del	0.913	1
PRKDC	Del_5q21.2	0.913	1
BCL9	Amp_11p15.5	0.913	1
NR1H3	Amp_20p11.21	0.913	1
NLRC4	12p-Amp	0.913	1
RLIM	20q-Amp	0.913	1
C2orf29	18q-Del	0.913	1
SMAD4	17p-Del	0.913	1
FYN	18p-Del	0.913	1
BCORL1	Amp_11p15.5	0.913	1
BCORL1	Del_1p13.2	0.913	1
SLC12A6	Amp_11p15.5	0.913	1
CDK12	8p-Del	0.913	1
IDH1	Amp_20q12	0.913	1
CREBBP	Amp_8p11.23	0.913	1
CTNNB1	Amp_17q12	0.913	1
Amp_17q12	Del_4p16.1	0.913	1
RNF43	21q-Del	0.914	1
ACVR1B	Del_4q22.1	0.914	1
OR4D10	20q-Amp	0.914	1
EGR1	SMAD4	0.914	1
ST3GAL6	SMAD4	0.914	1
ST3GAL6	7q-Amp	0.914	1
PLEKHF2	7q-Amp	0.914	1
C11orf30	Amp_8p11.21	0.914	1
SMAD4	17q-Amp	0.914	1
BMPR2	Del_21q11.2	0.914	1
Amp_5p12	Del_3p14.2	0.914	1
SOX9	Amp_16p11.2	0.915	1
TXNDC2	Amp_17q12	0.915	1
ACVR1B	Amp_20p12.1	0.915	1
MLH1	21q-Del	0.915	1
STARD3NL	14q-Del	0.915	1
ALPK2	Del_6p25.3	0.915	1
ASXL1	Del_6p25.3	0.915	1
ASXL1	Del_6q26	0.915	1
ASXL1	Del_19p13.3	0.915	1
DIP2B	Del_5q22.2	0.915	1
PCBP1	14q-Del	0.915	1
RBPJ	Del_21q21.1	0.915	1
RBBP7	Del_21q21.1	0.915	1
RB1	Amp_13q12.13	0.915	1
DCLK2	14q-Del	0.915	1
PTEN	Del_7q31.1	0.915	1
HLA-A	Del_21q21.1	0.915	1
FYN	14q-Del	0.915	1
PRPS1	Del_18p11.31	0.915	1
PTGDR	Del_18p11.31	0.915	1
BIRC3	14q-Del	0.915	1
ATM	Amp_16p11.2	0.915	1
CTNNB1	Del_17p12	0.915	1
16p-Amp	Del_21q21.1	0.915	1
TP53	ZFP36L2	0.916	1
TP53	TPRKB	0.916	1
TP53	RBBP7	0.916	1
TP53	GMPS	0.916	1
SOX9	Del_5q22.2	0.916	1
MLH1	Amp_20q11.21	0.916	1
BCOR	Del_1p33	0.916	1
OR4D10	Del_15q22.33	0.916	1
THOC7	8p-Del	0.916	1
CHUK	Del_15q21.1	0.916	1
C11orf30	8p-Amp	0.916	1
C11orf30	Del_15q21.1	0.916	1
PRRG1	Del_1p36.11	0.916	1
RSPH3	8p-Del	0.916	1
ROS1	5q-Del	0.916	1
ROS1	Amp_2q33.1	0.916	1
LARP4B	Del_1p33	0.916	1
8p-Amp	Del_3p26.3	0.916	1
Amp_10q22.3	Del_1p36.11	0.916	1
Amp_11p15.5	Del_3p14.2	0.916	1
Del_1p33	Del_17q24.3	0.916	1
RHOA	Del_15q11.2	0.917	1
ERBB2	12q-Amp	0.917	1
IQCD	Del_15q11.2	0.917	1
PTCH1	22q-Del	0.917	1
RB1	22q-Del	0.917	1
ZNF486	Del_15q11.2	0.917	1
CREBBP	Amp_16p11.2	0.917	1
22q-Del	Amp_8q24.21	0.917	1
Amp_20q13.12	Del_6p25.3	0.917	1
ARID1A	SMAD2	0.918	1
OR4D10	Del_18p11.31	0.918	1
NF1	Del_3p26.3	0.918	1
BCL9	Del_5q12.1	0.918	1
ZBTB20	21q-Del	0.918	1
ZBTB20	Del_5q21.2	0.918	1
ALG12	Amp_20q13.12	0.918	1
NLRC4	Del_5q12.1	0.918	1
BCORL1	Del_5q12.1	0.918	1
MAP4K3	21q-Del	0.918	1
MAP4K3	Del_5q21.2	0.918	1
CDK12	Del_10q25.2	0.918	1
IDH1	21q-Del	0.918	1
IDH1	Del_5q21.2	0.918	1
CREBBP	Del_1p33	0.918	1
12q-Amp	Del_18q12.2	0.918	1
17q-Amp	Del_5q21.2	0.918	1
Amp_8p11.21	Del_10q25.2	0.918	1
CRIPAK	Del_21q21.1	0.919	1
FAM123B	Del_18q22.1	0.919	1
B2M	Del_4q22.1	0.919	1
SMAD2	Del_17p12	0.919	1
OR4D10	Del_22q13.32	0.919	1
PRKDC	Amp_17q24.1	0.919	1
FBXW7	2p-Amp	0.919	1
FBXW7	Amp_15q26.1	0.919	1
CHUK	Amp_8p11.23	0.919	1
ATXN3L	17p-Del	0.919	1
MVK	Del_15q15.2	0.919	1
BCL9	Del_21q11.2	0.919	1
PLEKHF2	20q-Amp	0.919	1
NR1H3	7p-Amp	0.919	1
GRB2	Amp_20q13.12	0.919	1
C11orf30	Amp_8p11.23	0.919	1
PIK3R1	Del_18q22.1	0.919	1
ROS1	Amp_17q12	0.919	1
ROS1	Del_15q21.1	0.919	1
DDX26B	Del_22q13.32	0.919	1
RBBP7	Del_4q22.1	0.919	1
HLA-A	Del_4q22.1	0.919	1
FYN	7p-Amp	0.919	1
BCORL1	Del_21q11.2	0.919	1
GPATCH8	7p-Amp	0.919	1
GPATCH8	8q-Amp	0.919	1
NEXN	17p-Del	0.919	1
BIRC3	7p-Amp	0.919	1
17p-Del	Amp_19q12	0.919	1
18p-Del	Amp_1q31.1	0.919	1
APC	12q-Amp	0.92	1
FAM123B	Del_5q12.1	0.92	1
ZFP36L2	Del_18q21.2	0.92	1
RPTN	Del_18q21.2	0.92	1
BCL9	8p-Del	0.92	1
ST3GAL6	Amp_20p11.21	0.92	1
PTCH1	1p-Del	0.92	1
RB1	1p-Del	0.92	1
FKBP9	8p-Del	0.92	1
ALDH1A3	8p-Del	0.92	1
BCORL1	7p-Amp	0.92	1
ARID1A	7p-Amp	0.921	1
ARID1A	8q-Amp	0.921	1
SOX9	Del_1p36.11	0.921	1
PRKDC	Del_4p16.1	0.921	1
MVK	Del_15q21.1	0.921	1
PTCH1	Del_10q21.1	0.921	1
PRRG1	Del_14q11.2	0.921	1
RB1	9p-Amp	0.921	1
DCLK2	Amp_13q12.2	0.921	1
PTEN	Del_3p14.2	0.921	1
PTEN	Del_5q23.3	0.921	1
IDH1	Del_18q12.2	0.921	1
SELPLG	Del_17p12	0.922	1
OR4D10	17p-Del	0.922	1
RHOA	Amp_20q13.12	0.922	1
NF1	Del_10q25.2	0.922	1
ASXL1	7p-Amp	0.922	1
RB1	Del_5q12.1	0.922	1
MAP4K3	22q-Del	0.922	1
MAP4K3	Del_4p16.1	0.922	1
MAP4K3	Del_8p23.2	0.922	1
CDK12	Del_14q11.2	0.922	1
IDH1	Amp_13q22.1	0.922	1
IDH1	Del_4p16.1	0.922	1
Amp_20p12.1	Del_1p13.2	0.922	1
CRIPAK	Del_18p11.31	0.923	1
FAM123B	Del_4p16.1	0.923	1
ACVR1B	Del_4q35.1	0.923	1
GGT1	20p-Amp	0.923	1
NF2	Amp_8q24.21	0.923	1
FBXW7	Del_6q26	0.923	1
FBXW7	Del_21q21.1	0.923	1
MGA	Del_3p14.2	0.923	1
TPRKB	Del_8p23.2	0.923	1
BCL9	Amp_13q12.13	0.923	1
BCL9	Del_3p14.2	0.923	1
PTCH1	7p-Amp	0.923	1
NLRC4	Del_3p14.2	0.923	1
ROS1	Del_22q13.32	0.923	1
SMAD4	12p-Amp	0.923	1
SMAD4	Amp_11p15.5	0.923	1
SMAD4	Del_1p13.2	0.923	1
BCORL1	14q-Del	0.923	1
PTGDR	Del_17p12	0.923	1
CTNNB1	Del_18q12.2	0.923	1
TP53	TOP2B	0.924	1
TXNDC2	8p-Amp	0.924	1
MAPK6	Amp_20p12.1	0.924	1
MGA	7q-Amp	0.924	1
ERBB2	Del_21q11.2	0.924	1
DIP2B	15q-Del	0.924	1
DIP2B	Amp_12p13.33	0.924	1
DIP2B	Amp_13q12.2	0.924	1
TOP2B	Del_15q15.2	0.924	1
BMPR2	20p-Del	0.924	1
ALDH1A3	Amp_20p12.1	0.924	1
LARP4B	15q-Del	0.924	1
ATM	21q-Del	0.924	1
HIST1H1T	20q-Amp	0.924	1
GMNN	Amp_20p11.21	0.924	1
8p-Amp	Del_19p13.3	0.924	1
8q-Amp	Del_7q31.1	0.924	1
Amp_1q31.1	Del_21q11.2	0.924	1
Amp_8p11.23	Amp_10q22.3	0.924	1
Amp_11p15.5	Del_5q22.2	0.924	1
ACVR1B	20p-Amp	0.925	1
NF2	Del_8q11.1	0.925	1
PTCH1	Amp_5p12	0.925	1
DIP2B	13q-Amp	0.925	1
PIK3R1	Del_21q21.1	0.925	1
RBPJ	Del_4q35.1	0.925	1
RBBP7	Del_4q35.1	0.925	1
PTEN	Del_14q11.2	0.925	1
HLA-A	Del_4q35.1	0.925	1
ERBB2	21q-Del	0.926	1
ERBB2	Del_5q21.2	0.926	1
PCBP1	Amp_20q13.12	0.926	1
ROS1	4p-Del	0.926	1
DCLK2	Amp_20q13.12	0.926	1
APC	Del_2p12	0.927	1
SOX9	15q-Del	0.927	1
SMAD2	21q-Del	0.927	1
OR4D10	Amp_20q11.21	0.927	1
MAPK6	Del_5q22.2	0.927	1
ATXN3L	Del_18q22.1	0.927	1
PCBP1	Del_18q22.1	0.927	1
RLIM	Del_21q21.1	0.927	1
RB1	7q-Amp	0.927	1
TOP2B	Del_15q21.1	0.927	1
FKBP9	Del_5q22.2	0.927	1
LARP4B	Del_10q23.31	0.927	1
CTNNB1	14q-Del	0.927	1
8p-Amp	Del_4q35.1	0.927	1
RNF43	Amp_5p12	0.928	1
SOX9	CTNNB1	0.928	1
BCOR	Del_21q21.1	0.928	1
OR4D10	14q-Del	0.928	1
OR4D10	Del_18q12.2	0.928	1
EGR1	Amp_13q22.1	0.928	1
PRKDC	Del_1p33	0.928	1
IQCD	Del_18p11.31	0.928	1
ALPK2	8p-Del	0.928	1
ASXL1	8p-Del	0.928	1
GRB2	18q-Del	0.928	1
DIP2B	Amp_13q22.1	0.928	1
IFT57	Del_18p11.31	0.928	1
ROS1	Del_10q25.2	0.928	1
RBBP7	Del_15q22.33	0.928	1
CREBBP	16p-Amp	0.928	1
CREBBP	Del_8q11.1	0.928	1
KDM6A	12p-Amp	0.928	1
4p-Del	Amp_8p11.21	0.928	1
Amp_8p11.23	Del_1p36.11	0.928	1
Amp_11p15.5	Del_16q23.1	0.928	1
Amp_12p13.33	Del_5q22.2	0.928	1
ZFP36L2	13q-Amp	0.929	1
FMN2	Amp_11p15.5	0.929	1
PRKDC	7q-Amp	0.929	1
RPTN	13q-Amp	0.929	1
CHUK	Del_18p11.31	0.929	1
ALPK2	Amp_11p15.5	0.929	1
ASXL1	12p-Amp	0.929	1
RBBP7	13q-Amp	0.929	1
RB1	14q-Del	0.929	1
TOP2B	Amp_8p11.21	0.929	1
C14orf184	17p-Del	0.929	1
Amp_8p11.21	Del_6p25.3	0.929	1
ARID1A	Amp_6p21.1	0.93	1
RPTN	Amp_20q13.12	0.93	1
NF1	Del_15q22.33	0.93	1
FBXW7	Del_5q12.1	0.93	1
CHUK	Del_15q11.2	0.93	1
ERBB2	Amp_13q12.2	0.93	1
P2RY13	Del_1p36.11	0.93	1
PLEKHF2	Amp_20q11.21	0.93	1
PLAGL2	20p-Amp	0.93	1
PLAGL2	Del_8p23.2	0.93	1
C11orf30	Del_15q11.2	0.93	1
RLIM	Del_4q22.1	0.93	1
RBPJ	Amp_20q13.12	0.93	1
DCLK2	Del_1p36.11	0.93	1
PTEN	Amp_20q11.21	0.93	1
SETD2	14q-Del	0.93	1
ATM	Del_6q26	0.93	1
Amp_16p11.2	Del_3p14.2	0.93	1
FAM123B	5q-Del	0.931	1
FAM123B	Del_3q26.31	0.931	1
ACVR1B	Del_22q13.32	0.931	1
MLH1	20q-Amp	0.931	1
MLH1	Del_3q26.31	0.931	1
SMAD2	22q-Del	0.931	1
RPTN	Del_22q13.32	0.931	1
MGA	Del_5q22.2	0.931	1
PLEKHF2	17p-Del	0.931	1
PTEN	Del_15q22.33	0.931	1
ATM	Del_21q11.2	0.931	1
6p-Amp	18q-Del	0.931	1
8q-Amp	Del_1p33	0.931	1
8q-Amp	Del_1p13.2	0.931	1
Amp_5p12	Del_1p36.11	0.931	1
Amp_17q24.1	Del_4p16.1	0.931	1
FAM123B	20p-Del	0.932	1
SOX9	Del_21q21.1	0.932	1
BCOR	Del_8p22	0.932	1
SMAD2	SMAD4	0.932	1
NF1	Del_19p13.3	0.932	1
MVK	Del_15q11.2	0.932	1
P2RY13	Del_15q15.2	0.932	1
PTCH1	Del_8p22	0.932	1
PCBP1	Del_15q15.2	0.932	1
DCLK2	Del_15q15.2	0.932	1
CDK12	7p-Amp	0.932	1
PRPS1	18p-Del	0.932	1
PTGDR	18p-Del	0.932	1
BIRC3	Del_15q15.2	0.932	1
ATM	Del_15q15.2	0.932	1
CTNNB1	18q-Del	0.932	1
ARID1A	Del_4p16.1	0.933	1
ARID1A	Del_15q22.33	0.933	1
RNF43	8q-Amp	0.933	1
SOX9	8p-Amp	0.933	1
EGR1	8p-Del	0.933	1
PLEKHF2	8p-Del	0.933	1
PTCH1	Del_15q15.2	0.933	1
DIP2B	Del_4q22.1	0.933	1
PIK3R1	Del_6p25.3	0.933	1
PIK3R1	Del_6q26	0.933	1
VCX2	8p-Del	0.933	1
SMAD4	Amp_20q13.12	0.933	1
KDM6A	Del_5q12.1	0.933	1
18p-Del	Del_16q23.1	0.933	1
APC	BCOR	0.934	1
FMN2	21q-Del	0.934	1
SELPLG	Amp_12p13.33	0.934	1
PRKDC	Del_8q11.1	0.934	1
RPTN	Del_8p22	0.934	1
ATXN3L	Del_18p11.31	0.934	1
PCBP1	Del_18q21.2	0.934	1
RLIM	20p-Amp	0.934	1
RLIM	Amp_8p11.21	0.934	1
RBBP7	Del_8p22	0.934	1
FKBP9	15q-Del	0.934	1
FKBP9	Amp_12p13.33	0.934	1
HLA-A	Del_8p22	0.934	1
ATM	Del_5q12.1	0.934	1
1p-Del	Amp_8p11.21	0.934	1
8p-Del	Amp_19q12	0.934	1
Amp_12p13.33	Del_1p13.2	0.934	1
CRIPAK	12p-Amp	0.935	1
CRIPAK	Amp_11p15.5	0.935	1
CRIPAK	Del_1p13.2	0.935	1
CDH1	13q-Amp	0.935	1
STARD3NL	Del_14q11.2	0.935	1
PRKDC	4p-Del	0.935	1
ATXN3L	Del_18q21.2	0.935	1
MGA	Amp_17q12	0.935	1
TPRKB	13q-Amp	0.935	1
P2RY13	Del_15q21.1	0.935	1
PCBP1	Del_15q21.1	0.935	1
ROS1	Del_12p13.1	0.935	1
C2orf29	Amp_20p11.21	0.935	1
DCLK2	Del_14q11.2	0.935	1
DCLK2	Del_15q21.1	0.935	1
BMPR2	Del_10q25.2	0.935	1
FYN	Del_14q11.2	0.935	1
BIRC3	Del_15q21.1	0.935	1
HIST1H1T	13q-Amp	0.935	1
CREBBP	Del_10q23.31	0.935	1
Amp_8p11.21	Del_21q21.1	0.935	1
FAM123B	8p-Del	0.936	1
CDH1	Amp_6p21.1	0.936	1
CDH1	Del_3p26.3	0.936	1
SMAD2	Amp_8q24.21	0.936	1
SELPLG	Del_18q12.2	0.936	1
NF2	1p-Del	0.936	1
RHOA	Del_17p12	0.936	1
FBXW7	Del_10q23.31	0.936	1
FBXW7	Del_15q15.2	0.936	1
CHUK	21q-Del	0.936	1
CHUK	Del_5q21.2	0.936	1
NLRC4	4p-Del	0.936	1
DIP2B	Del_5q23.3	0.936	1
IFT57	SMAD4	0.936	1
C2orf29	Del_18q12.2	0.936	1
SMAD4	Del_18q22.1	0.936	1
DCLK2	Amp_13q12.13	0.936	1
PTEN	Del_1p36.11	0.936	1
SLC12A6	4p-Del	0.936	1
BIRC3	Amp_13q12.13	0.936	1
ZNF486	Del_17p12	0.936	1
18q-Del	Amp_1q31.1	0.936	1
FAM123B	18q-Del	0.937	1
CDH1	Amp_13q12.13	0.937	1
MAPK6	Del_21q21.1	0.937	1
FAM9A	Amp_8p11.21	0.937	1
RPTN	Del_21q11.2	0.937	1
NF1	4q-Del	0.937	1
FBXW7	8p-Amp	0.937	1
ASXL1	14q-Del	0.937	1
PCBP1	Amp_8p11.23	0.937	1
RSPH3	Amp_8p11.21	0.937	1
RBPJ	Del_21q11.2	0.937	1
RBBP7	Del_21q11.2	0.937	1
DCLK2	Amp_8p11.23	0.937	1
PTEN	Amp_17q24.1	0.937	1
HLA-A	Del_21q11.2	0.937	1
ALDH1A3	Del_21q21.1	0.937	1
LARP4B	7q-Amp	0.937	1
MAP4K3	17p-Del	0.937	1
BIRC3	Amp_8p11.23	0.937	1
IDH1	17p-Del	0.937	1
KDM6A	Del_3p14.2	0.937	1
17q-Amp	17p-Del	0.937	1
Amp_1q31.1	Del_18p11.31	0.937	1
Amp_19q12	Del_5q22.2	0.937	1
FAM123B	Del_1p36.11	0.938	1
OR4D10	18p-Del	0.938	1
NF1	Del_8p23.2	0.938	1
ATXN3L	18q-Del	0.938	1
ALPK2	Amp_16p11.2	0.938	1
PTCH1	Del_8p23.2	0.938	1
APC	ZBTB20	0.939	1
ZFP36L2	14q-Del	0.939	1
B2M	14q-Del	0.939	1
MLH1	Del_4q35.1	0.939	1
FMN2	Amp_8q24.21	0.939	1
RPTN	14q-Del	0.939	1
PLAGL2	13q-Amp	0.939	1
C11orf30	22q-Del	0.939	1
RLIM	Del_15q22.33	0.939	1
IDH1	Amp_20q13.12	0.939	1
8p-Amp	4q-Del	0.939	1
ARID1A	Del_6q26	0.94	1
ARID1A	Del_19p13.3	0.94	1
FAM123B	Del_18q12.2	0.94	1
FMN2	Amp_2q33.1	0.94	1
FMN2	Del_21q21.1	0.94	1
SELPLG	Del_4q22.1	0.94	1
OR4D10	Amp_20q12	0.94	1
NF2	Del_17q24.3	0.94	1
MAPK6	Del_4q22.1	0.94	1
ERBB2	BMPR2	0.94	1
ERBB2	Del_10q25.2	0.94	1
SLC26A8	Del_4q22.1	0.94	1
RBBP7	Del_18p11.31	0.94	1
L1TD1	Amp_20p12.1	0.94	1
TOP2B	Del_15q11.2	0.94	1
PTEN	15q-Del	0.94	1
BMPR2	Amp_1q31.1	0.94	1
ALDH1A3	Del_4q22.1	0.94	1
Amp_20p12.1	Del_3q26.31	0.94	1
MLH1	Amp_8q24.21	0.941	1
MLH1	Amp_17q12	0.941	1
BCOR	4q-Del	0.941	1
BCOR	Amp_11p15.5	0.941	1
PLEKHF2	Amp_20q12	0.941	1
PTCH1	Del_15q21.1	0.941	1
NLRC4	Del_1p36.11	0.941	1
DIP2B	4q-Del	0.941	1
DIP2B	Del_18p11.31	0.941	1
PRRG1	13q-Amp	0.941	1
RLIM	Amp_20q12	0.941	1
DDX26B	Del_1p36.11	0.941	1
HLA-A	17p-Del	0.941	1
LARP4B	Del_1p13.2	0.941	1
BCORL1	Del_1p36.11	0.941	1
ATM	14q-Del	0.941	1
CTNNB1	Amp_20q13.12	0.941	1
RNF43	Amp_16p11.2	0.942	1
SOX9	Del_10q21.1	0.942	1
ACVR1B	14q-Del	0.942	1
FBXW7	NR1H3	0.942	1
MGA	7p-Amp	0.942	1
PLAGL2	Del_8p22	0.942	1
SMAD4	2p-Amp	0.942	1
SMAD4	2q-Amp	0.942	1
SMAD4	Amp_16p11.2	0.942	1
CTNNB1	Amp_20q11.21	0.942	1
12q-Amp	Del_5q23.3	0.942	1
CRIPAK	PRKDC	0.943	1
NF1	Amp_5p12	0.943	1
PTCH1	VCX2	0.943	1
ROS1	Amp_6p21.1	0.943	1
ROS1	Del_3p26.3	0.943	1
L1TD1	Amp_12p13.33	0.943	1
LARP4B	Amp_20p12.1	0.943	1
NEXN	Del_17p12	0.943	1
HIST1H1T	Del_18p11.31	0.943	1
IDH1	20q-Amp	0.943	1
15q-Del	Amp_19q12	0.943	1
STARD3NL	Amp_20p12.1	0.944	1
OR4D10	Del_15q15.2	0.944	1
PRKDC	1p-Del	0.944	1
NF1	Del_1p33	0.944	1
BCL9	Del_15q15.2	0.944	1
P2RY13	Amp_20p12.1	0.944	1
P2RY13	Del_15q11.2	0.944	1
NR1H3	Amp_8q24.21	0.944	1
NLRC4	Del_15q15.2	0.944	1
DIP2B	Del_15q22.33	0.944	1
PCBP1	Del_15q11.2	0.944	1
DDX26B	Del_15q15.2	0.944	1
SMAD4	Del_21q11.2	0.944	1
DCLK2	Amp_20p12.1	0.944	1
DCLK2	Del_15q11.2	0.944	1
FYN	Amp_8q24.21	0.944	1
FYN	Del_15q11.2	0.944	1
LARP4B	Del_15q22.33	0.944	1
BCORL1	Del_15q15.2	0.944	1
GPATCH8	Amp_8q24.21	0.944	1
BIRC3	Amp_8q24.21	0.944	1
BIRC3	Amp_20p12.1	0.944	1
BIRC3	Del_15q11.2	0.944	1
ZNF486	Del_18q22.1	0.944	1
CREBBP	Del_17q24.3	0.944	1
BCOR	Del_5q12.1	0.945	1
FMN2	Del_18q21.2	0.945	1
SELPLG	Del_4q35.1	0.945	1
NF2	Del_22q13.32	0.945	1
RHOA	Amp_20p11.21	0.945	1
MGA	Del_17q24.3	0.945	1
MGA	Del_21q21.1	0.945	1
ERBB2	Amp_17q24.1	0.945	1
IQCD	18p-Del	0.945	1
DIP2B	Amp_13q12.13	0.945	1
DIP2B	Del_5q12.1	0.945	1
IFT57	Amp_20p11.21	0.945	1
FKBP9	Del_4q35.1	0.945	1
PTEN	Del_8p23.2	0.945	1
IDH1	Del_5q22.2	0.945	1
IDH1	Del_8p22	0.945	1
ZNF486	Amp_20p11.21	0.945	1
Amp_12p13.33	Del_4p16.1	0.945	1
ARID1A	15q-Del	0.946	1
TP53	C11orf30	0.946	1
ACVR1B	13q-Amp	0.946	1
CDH1	Del_6q26	0.946	1
MLH1	Del_10q25.2	0.946	1
OR4D10	Del_14q11.2	0.946	1
OR4D10	Del_15q21.1	0.946	1
RPTN	20q-Amp	0.946	1
NF1	Del_4p16.1	0.946	1
NF1	Del_5q12.1	0.946	1
RLIM	Del_21q11.2	0.946	1
MPHOSPH10	Del_21q11.2	0.946	1
DDX26B	Del_15q21.1	0.946	1
RBPJ	20q-Amp	0.946	1
RB1	Amp_19q12	0.946	1
TOP2B	22q-Del	0.946	1
PTEN	Del_15q15.2	0.946	1
NEXN	Del_21q21.1	0.946	1
ATM	17q-Amp	0.946	1
KDM6A	7p-Amp	0.946	1
12q-Amp	4q-Del	0.946	1
7p-Amp	Del_16q23.1	0.946	1
8q-Amp	Del_16q23.1	0.946	1
Amp_2q33.1	Del_21q21.1	0.946	1
FAM123B	Del_12p13.1	0.947	1
FMN2	20p-Amp	0.947	1
FMN2	Del_8p23.2	0.947	1
MAPK6	Amp_8p11.21	0.947	1
MAPK6	Amp_8q24.21	0.947	1
RHOA	8p-Del	0.947	1
THOC7	Del_8p23.2	0.947	1
BCL9	Del_15q21.1	0.947	1
IQCD	8p-Del	0.947	1
GRB2	20p-Amp	0.947	1
NLRC4	Del_15q21.1	0.947	1
RSPH3	20p-Amp	0.947	1
SLC26A8	Amp_8p11.21	0.947	1
RB1	Amp_8p11.23	0.947	1
FKBP9	Amp_8q24.21	0.947	1
PTEN	Del_6q26	0.947	1
FYN	20p-Amp	0.947	1
LARP4B	Del_22q13.32	0.947	1
BCORL1	Del_14q11.2	0.947	1
BIRC3	Del_8p23.2	0.947	1
ZNF486	8p-Del	0.947	1
FAM123B	Del_14q11.2	0.948	1
MLH1	Amp_20q13.12	0.948	1
MLH1	Del_14q11.2	0.948	1
FMN2	Del_18q12.2	0.948	1
NF2	9p-Amp	0.948	1
NF1	8p-Del	0.948	1
FBXW7	Del_8p23.2	0.948	1
FBXW7	Del_21q11.2	0.948	1
ATXN3L	Del_4q22.1	0.948	1
ERBB2	Amp_20q13.12	0.948	1
DDX26B	Amp_8p11.23	0.948	1
L1TD1	Del_4q22.1	0.948	1
FKBP9	Del_15q22.33	0.948	1
ALDH1A3	Del_15q22.33	0.948	1
NEXN	Del_4q22.1	0.948	1
CREBBP	Del_16p13.3	0.948	1
CTNNB1	Del_18q21.2	0.948	1
Amp_19q12	Del_4q22.1	0.948	1
CRIPAK	Amp_20p11.21	0.949	1
SOX9	Del_15q22.33	0.949	1
BCOR	17p-Del	0.949	1
TPRKB	Del_17p12	0.949	1
PIK3R1	Del_1p13.2	0.949	1
RB1	Amp_17q12	0.949	1
PTEN	Del_5q12.1	0.949	1
BCORL1	17p-Del	0.949	1
CREBBP	Del_5q23.3	0.949	1
TP53	Del_10q25.2	0.95	1
FAM123B	Del_8p22	0.95	1
B2M	8q-Amp	0.95	1
BCOR	Amp_8q24.21	0.95	1
RHOA	17p-Del	0.95	1
RPTN	7p-Amp	0.95	1
RPTN	8q-Amp	0.95	1
MGA	9p-Amp	0.95	1
HLA-A	8q-Amp	0.95	1
ALDH1A3	Del_22q13.32	0.95	1
SETD2	4p-Del	0.95	1
GMPS	7p-Amp	0.95	1
IDH1	Del_18q22.1	0.95	1
ZNF486	17p-Del	0.95	1
12q-Amp	Del_5q12.1	0.95	1
8p-Amp	14q-Del	0.95	1
TP53	BCOR	0.951	1
TP53	DIP2B	0.951	1
MLH1	Amp_1q31.1	0.951	1
MLH1	Amp_17q24.1	0.951	1
SMAD2	17p-Del	0.951	1
MAPK6	20p-Amp	0.951	1
NF1	18p-Del	0.951	1
FBXW7	17q-Amp	0.951	1
FBXW7	Del_10q21.1	0.951	1
CHUK	18p-Del	0.951	1
BCL9	Amp_8p11.21	0.951	1
ZBTB20	15q-Del	0.951	1
ERBB2	Amp_13q12.13	0.951	1
PLEKHF2	Amp_8p11.21	0.951	1
C11orf30	8q-Amp	0.951	1
DIP2B	Del_17p12	0.951	1
ROS1	8p-Del	0.951	1
PTEN	17q-Amp	0.951	1
HLA-A	Del_1p36.11	0.951	1
ALDH1A3	20p-Amp	0.951	1
SETD2	Del_1p36.11	0.951	1
SLC12A6	Amp_8p11.21	0.951	1
CDK12	4q-Del	0.951	1
ATM	Del_1p33	0.951	1
ZNF486	Amp_13q22.1	0.951	1
CREBBP	9p-Amp	0.951	1
12p-Amp	Del_4q35.1	0.951	1
Amp_8p11.23	Del_10q25.2	0.951	1
Amp_8p11.21	Del_3p14.2	0.951	1
Amp_20p11.21	Del_3p26.3	0.951	1
ARID1A	Del_21q11.2	0.952	1
TP53	MPHOSPH10	0.952	1
SOX9	18p-Del	0.952	1
PRKDC	Del_16p13.3	0.952	1
IQCD	20q-Amp	0.952	1
NLRC4	Amp_20p12.1	0.952	1
C11orf30	Amp_8q24.21	0.952	1
SMAD4	14q-Del	0.952	1
SMAD4	Del_18p11.31	0.952	1
SETD2	Del_17q24.3	0.952	1
KDM6A	8p-Amp	0.952	1
6p-Amp	17p-Del	0.952	1
7p-Amp	22q-Del	0.952	1
8q-Amp	22q-Del	0.952	1
Amp_8q24.21	Del_1p33	0.952	1
ARID1A	18p-Del	0.953	1
CRIPAK	Amp_20q13.12	0.953	1
TP53	Amp_12p13.33	0.953	1
TP53	Del_7q31.1	0.953	1
BCOR	Del_21q11.2	0.953	1
FBXW7	15q-Del	0.953	1
FBXW7	Amp_17q24.1	0.953	1
ZBTB20	Del_21q21.1	0.953	1
ASXL1	17p-Del	0.953	1
ROS1	Del_10q23.31	0.953	1
L1TD1	Del_4q35.1	0.953	1
BMPR2	Del_5q22.2	0.953	1
FYN	18q-Del	0.953	1
GMPS	Del_15q15.2	0.953	1
IDH1	Del_21q21.1	0.953	1
Amp_20p11.21	Del_3q26.31	0.953	1
MLH1	Amp_6p21.1	0.954	1
WNT1	Amp_8q24.21	0.954	1
FMN2	Amp_17q12	0.954	1
STARD3NL	7q-Amp	0.954	1
OR4D10	Del_15q11.2	0.954	1
NF2	Amp_20p12.1	0.954	1
P2RY13	7q-Amp	0.954	1
NR1H3	7q-Amp	0.954	1
PCBP1	7q-Amp	0.954	1
C2orf29	Amp_20q11.21	0.954	1
DDX26B	Del_15q11.2	0.954	1
FYN	7q-Amp	0.954	1
GPATCH8	7q-Amp	0.954	1
CDK12	7q-Amp	0.954	1
CDK12	Del_4q35.1	0.954	1
9p-Amp	Del_22q13.32	0.954	1
Amp_11p15.5	Del_15q11.2	0.954	1
ZFP36L2	Del_14q11.2	0.955	1
B2M	Del_14q11.2	0.955	1
SMAD2	8p-Del	0.955	1
SMAD2	Amp_13q12.13	0.955	1
FMN2	Del_4q35.1	0.955	1
MAPK6	Del_21q11.2	0.955	1
PLAGL2	Amp_20p11.21	0.955	1
SMAD4	18q-Del	0.955	1
ALDH1A3	Del_21q11.2	0.955	1
LARP4B	Amp_17q12	0.955	1
MAP4K3	Del_4q22.1	0.955	1
NEXN	Del_15q22.33	0.955	1
CREBBP	Amp_2q33.1	0.955	1
CREBBP	Amp_19q12	0.955	1
Amp_19q12	Del_15q22.33	0.955	1
CRIPAK	8q-Amp	0.956	1
SOX9	21q-Del	0.956	1
WNT1	20p-Amp	0.956	1
WNT1	Del_8p23.2	0.956	1
FAM9A	13q-Amp	0.956	1
FBXW7	Del_5q23.3	0.956	1
ATXN3L	Del_18q12.2	0.956	1
BCL9	Del_5q21.2	0.956	1
ERBB2	Del_18q22.1	0.956	1
PLEKHF2	Amp_20q13.12	0.956	1
PTCH1	21q-Del	0.956	1
NLRC4	21q-Del	0.956	1
NLRC4	Del_5q21.2	0.956	1
PIK3R1	Amp_20q11.21	0.956	1
PTEN	Amp_13q12.13	0.956	1
SLC12A6	Amp_13q12.2	0.956	1
ATM	Amp_15q26.1	0.956	1
KDM6A	Del_1p36.11	0.956	1
20p-Del	Amp_11p15.5	0.956	1
B2M	Amp_8p11.23	0.957	1
CDH1	Del_8p23.2	0.957	1
SELPLG	14q-Del	0.957	1
OR4D10	Amp_20q13.12	0.957	1
OR4D10	Del_18q21.2	0.957	1
NF2	Amp_20p11.21	0.957	1
FAM9A	20q-Amp	0.957	1
FAM9A	8q-Amp	0.957	1
PRKDC	9p-Amp	0.957	1
PRKDC	Del_10q21.1	0.957	1
RPTN	Amp_8p11.23	0.957	1
NF1	Del_1p36.11	0.957	1
GRB2	20q-Amp	0.957	1
NLRC4	Del_15q11.2	0.957	1
PLAGL2	Amp_13q12.2	0.957	1
PRRG1	8p-Del	0.957	1
RBPJ	Amp_20p11.21	0.957	1
RBBP7	18p-Del	0.957	1
RBBP7	Amp_20p11.21	0.957	1
DCLK2	Amp_20q11.21	0.957	1
PTEN	Del_16q23.1	0.957	1
SETD2	Del_10q21.1	0.957	1
Amp_2q33.1	Del_22q13.32	0.957	1
Amp_19q12	Del_22q13.32	0.957	1
Del_16q23.1	Del_18p11.31	0.957	1
TP53	L1TD1	0.958	1
GGT1	Amp_20p12.1	0.958	1
NF1	14q-Del	0.958	1
ERBB2	Amp_20q12	0.958	1
ERBB2	Del_5q22.2	0.958	1
P2RY13	13q-Amp	0.958	1
NR1H3	13q-Amp	0.958	1
ALPK2	15q-Del	0.958	1
PTCH1	Del_4q22.1	0.958	1
NLRC4	Del_4p16.1	0.958	1
PLAGL2	Amp_13q22.1	0.958	1
PIK3R1	8q-Amp	0.958	1
SMAD4	Del_6q26	0.958	1
SMAD4	Del_19p13.3	0.958	1
RB1	Amp_20p12.1	0.958	1
DCLK2	13q-Amp	0.958	1
LARP4B	4p-Del	0.958	1
SETD2	8q-Amp	0.958	1
SETD2	Del_14q11.2	0.958	1
SLC12A6	Amp_13q22.1	0.958	1
SLC12A6	Del_4p16.1	0.958	1
PRPS1	18q-Del	0.958	1
PTGDR	18q-Del	0.958	1
ATM	Del_4q35.1	0.958	1
CTNNB1	Del_18q22.1	0.958	1
FAM123B	Amp_20p12.1	0.959	1
FAM123B	Del_18p11.31	0.959	1
MLH1	Amp_20p12.1	0.959	1
FMN2	4p-Del	0.959	1
FMN2	Del_15q22.33	0.959	1
FBXW7	Amp_17q12	0.959	1
MGA	20p-Del	0.959	1
C11orf30	Del_5q22.2	0.959	1
PIK3R1	Del_18p11.31	0.959	1
BMPR2	Amp_12p13.33	0.959	1
IDH1	Del_17p12	0.959	1
12q-Amp	17p-Del	0.959	1
ARID1A	Del_10q25.2	0.96	1
CDH1	Del_1p13.2	0.96	1
SMAD2	Del_21q21.1	0.96	1
FMN2	Del_15q15.2	0.96	1
NF2	17q-Amp	0.96	1
RHOA	Amp_20q11.21	0.96	1
PRKDC	Amp_2q33.1	0.96	1
NF1	Del_4q35.1	0.96	1
TPRKB	Amp_13q22.1	0.96	1
ALPK2	9p-Amp	0.96	1
ALPK2	Del_15q15.2	0.96	1
ASXL1	12q-Amp	0.96	1
GRB2	Del_18q22.1	0.96	1
IFT57	Amp_20q11.21	0.96	1
SMAD4	Amp_20q12	0.96	1
RB1	Del_21q11.2	0.96	1
LARP4B	8p-Del	0.96	1
CDK12	Del_22q13.32	0.96	1
HIST1H1T	Amp_13q22.1	0.96	1
IDH1	Del_4q35.1	0.96	1
CREBBP	Del_5q12.1	0.96	1
12q-Amp	Del_18q21.2	0.96	1
9p-Amp	Amp_17q12	0.96	1
SOX9	Del_10q25.2	0.961	1
SOX9	Del_18p11.31	0.961	1
ACVR1B	Del_14q11.2	0.961	1
CDH1	Amp_20p12.1	0.961	1
MLH1	14q-Del	0.961	1
BCOR	8p-Amp	0.961	1
FMN2	Amp_6p21.1	0.961	1
FMN2	Amp_17q24.1	0.961	1
FMN2	Del_18q22.1	0.961	1
NF2	13q-Amp	0.961	1
PRKDC	4q-Del	0.961	1
RPTN	Amp_13q12.2	0.961	1
MPHOSPH10	Del_15q15.2	0.961	1
RBBP7	Amp_13q12.2	0.961	1
DCLK2	Del_8p22	0.961	1
PTEN	Amp_20p11.21	0.961	1
PTEN	Del_21q11.2	0.961	1
BMPR2	Del_5q23.3	0.961	1
GMPS	Amp_13q12.2	0.961	1
CREBBP	21q-Del	0.961	1
21q-Del	Amp_8p11.23	0.961	1
Amp_16p11.2	Del_5q21.2	0.961	1
TP53	RHOA	0.962	1
SOX9	14q-Del	0.962	1
OR4D10	7q-Amp	0.962	1
NF2	Del_4p16.1	0.962	1
RHOA	Amp_8p11.21	0.962	1
PRKDC	7p-Amp	0.962	1
ATXN3L	Del_21q11.2	0.962	1
ZBTB20	Del_15q22.33	0.962	1
ASXL1	Amp_20p12.1	0.962	1
PTCH1	Del_1p36.11	0.962	1
PTCH1	Del_4p16.1	0.962	1
DIP2B	18p-Del	0.962	1
IFT57	Amp_8p11.21	0.962	1
ROS1	Amp_20p12.1	0.962	1
RBBP7	Del_15q11.2	0.962	1
RB1	Del_4p16.1	0.962	1
SETD2	Del_8p22	0.962	1
NEXN	Del_21q11.2	0.962	1
ATM	Amp_11p15.5	0.962	1
ATM	Del_21q21.1	0.962	1
CREBBP	20p-Del	0.962	1
12p-Amp	18p-Del	0.962	1
8p-Amp	4p-Del	0.962	1
APC	2q-Amp	0.963	1
RNF43	Del_10q21.1	0.963	1
FAM123B	Del_18q21.2	0.963	1
SOX9	7q-Amp	0.963	1
FMN2	Del_22q13.32	0.963	1
NF2	20p-Amp	0.963	1
EGR1	20p-Amp	0.963	1
RPTN	Amp_13q22.1	0.963	1
FBXW7	Del_1p13.2	0.963	1
CHUK	8p-Del	0.963	1
ERBB2	20q-Amp	0.963	1
ERBB2	Del_18q21.2	0.963	1
ALPK2	Del_14q11.2	0.963	1
ALPK2	Del_15q21.1	0.963	1
PTCH1	4q-Del	0.963	1
PTCH1	Amp_11p15.5	0.963	1
PTCH1	Del_1p13.2	0.963	1
NLRC4	13q-Amp	0.963	1
PLAGL2	Amp_13q12.13	0.963	1
C11orf30	15q-Del	0.963	1
PRRG1	Amp_20p11.21	0.963	1
RLIM	Del_17p12	0.963	1
MPHOSPH10	Del_14q11.2	0.963	1
MPHOSPH10	Del_15q21.1	0.963	1
SMAD4	Amp_20q11.21	0.963	1
RBBP7	Amp_13q22.1	0.963	1
RB1	Del_1p13.2	0.963	1
PTEN	Amp_13q12.2	0.963	1
14q-Del	Amp_19q12	0.963	1
Amp_8p11.23	Del_1p33	0.963	1
APC	Amp_6p21.1	0.964	1
ARID1A	Del_18p11.31	0.964	1
TXNDC2	Amp_8q24.21	0.964	1
TXNDC2	Del_5q22.2	0.964	1
MLH1	Amp_13q12.13	0.964	1
SMAD2	20q-Amp	0.964	1
WNT1	Del_8p22	0.964	1
FMN2	Del_15q21.1	0.964	1
FAM9A	Amp_20q11.21	0.964	1
ERBB2	15q-Del	0.964	1
ERBB2	Del_5q23.3	0.964	1
GRB2	Del_18q21.2	0.964	1
PRRG1	17p-Del	0.964	1
PRRG1	Del_18q22.1	0.964	1
PIK3R1	Amp_13q12.2	0.964	1
SMAD4	Amp_17q12	0.964	1
PTEN	Del_15q11.2	0.964	1
MAP4K3	Del_22q13.32	0.964	1
20p-Amp	Del_3q26.31	0.964	1
1p-Del	Amp_8p11.23	0.964	1
Amp_20p11.21	Del_6p25.3	0.964	1
Amp_20q13.12	Del_6q26	0.964	1
RNF43	Del_21q21.1	0.965	1
FAM123B	Amp_5p12	0.965	1
ACVR1B	Del_5q21.2	0.965	1
CDH1	14q-Del	0.965	1
CDH1	Del_8q11.1	0.965	1
CDH1	Del_14q11.2	0.965	1
MLH1	Amp_5p12	0.965	1
CHUK	Del_21q21.1	0.965	1
BCL9	Del_18q12.2	0.965	1
P2RY13	Del_18p11.31	0.965	1
NR1H3	Del_18p11.31	0.965	1
PTCH1	14q-Del	0.965	1
SMAD4	16q-Amp	0.965	1
DCLK2	Del_18p11.31	0.965	1
FYN	Del_18q12.2	0.965	1
SETD2	20p-Del	0.965	1
ARID1A	7q-Amp	0.966	1
TP53	FYN	0.966	1
SMAD2	Del_4q35.1	0.966	1
FMN2	Del_6q26	0.966	1
STARD3NL	8p-Del	0.966	1
MAPK6	Del_1p36.11	0.966	1
PRKDC	IDH1	0.966	1
ERBB2	Del_21q21.1	0.966	1
P2RY13	8p-Del	0.966	1
NR1H3	8p-Del	0.966	1
ALG12	Del_18p11.31	0.966	1
NLRC4	Del_8p22	0.966	1
PRRG1	Amp_13q12.2	0.966	1
PCBP1	8p-Del	0.966	1
ROS1	Amp_16p11.2	0.966	1
C2orf29	Del_1p36.11	0.966	1
RB1	Amp_17q24.1	0.966	1
RB1	Del_15q15.2	0.966	1
DCLK2	8p-Del	0.966	1
FKBP9	Del_1p36.11	0.966	1
PTEN	Amp_20q13.12	0.966	1
FYN	8p-Del	0.966	1
ALDH1A3	Del_1p36.11	0.966	1
GPATCH8	8p-Del	0.966	1
BIRC3	8p-Del	0.966	1
8p-Amp	Del_8p23.2	0.966	1
ACVR1B	Amp_8p11.21	0.967	1
ACVR1B	Amp_8q24.21	0.967	1
CDH1	8q-Amp	0.967	1
RHOA	Amp_20q12	0.967	1
ZBTB20	Del_21q11.2	0.967	1
ERBB2	12p-Amp	0.967	1
ERBB2	Amp_11p15.5	0.967	1
IQCD	Amp_20q12	0.967	1
GRB2	Del_17p12	0.967	1
C11orf30	Del_4q22.1	0.967	1
PRRG1	Amp_13q22.1	0.967	1
IFT57	Amp_20q12	0.967	1
C2orf29	17p-Del	0.967	1
SLC26A8	Del_15q15.2	0.967	1
BMPR2	Del_5q12.1	0.967	1
MAP4K3	Del_21q11.2	0.967	1
SLC12A6	7q-Amp	0.967	1
PRPS1	Del_18q12.2	0.967	1
PTGDR	17p-Del	0.967	1
PTGDR	Del_18q12.2	0.967	1
ATM	9p-Amp	0.967	1
ATM	Del_10q21.1	0.967	1
ATM	Del_10q25.2	0.967	1
CREBBP	Del_21q21.1	0.967	1
CTNNB1	Amp_20p11.21	0.967	1
CTNNB1	Amp_20q12	0.967	1
Amp_8p11.21	Del_16q23.1	0.967	1
Amp_8q24.21	Del_1p13.2	0.967	1
TP53	Del_1p36.11	0.968	1
CDH1	Amp_20p11.21	0.968	1
CDH1	Del_8p22	0.968	1
MLH1	Amp_13q12.2	0.968	1
NF1	15q-Del	0.968	1
MGA	Del_21q11.2	0.968	1
PLEKHF2	7p-Amp	0.968	1
PRRG1	Del_18q21.2	0.968	1
TOP2B	15q-Del	0.968	1
PTEN	17p-Del	0.968	1
SLC12A6	Amp_13q12.13	0.968	1
CDK12	17p-Del	0.968	1
ATM	Amp_10q22.3	0.968	1
ATM	Del_4p16.1	0.968	1
ATM	Del_15q21.1	0.968	1
TP53	Amp_1q31.1	0.969	1
FAM123B	Amp_8q24.21	0.969	1
MLH1	13q-Amp	0.969	1
SMAD2	Del_22q13.32	0.969	1
SELPLG	Del_14q11.2	0.969	1
NF2	Del_10q25.2	0.969	1
MAPK6	8q-Amp	0.969	1
ROS1	Del_8p23.2	0.969	1
C2orf29	8q-Amp	0.969	1
SLC26A8	7p-Amp	0.969	1
RBBP7	Del_18q22.1	0.969	1
FKBP9	7p-Amp	0.969	1
C14orf184	Del_17p12	0.969	1
BMPR2	Del_3p14.2	0.969	1
KDM6A	Del_15q11.2	0.969	1
Amp_20p12.1	Del_16q23.1	0.969	1
ARID1A	8p-Del	0.97	1
ARID1A	Del_1p33	0.97	1
TP53	RBPJ	0.97	1
FMN2	Del_21q11.2	0.97	1
STARD3NL	Del_17p12	0.97	1
NF2	Amp_17q12	0.97	1
FAM9A	Amp_20q12	0.97	1
RPTN	Amp_13q12.13	0.97	1
NF1	Amp_20p11.21	0.97	1
CHUK	Del_8p22	0.97	1
P2RY13	Del_17p12	0.97	1
IQCD	18q-Del	0.97	1
PIK3R1	Amp_20q13.12	0.97	1
IFT57	18q-Del	0.97	1
RLIM	18p-Del	0.97	1
RLIM	Amp_20p11.21	0.97	1
ROS1	Del_5q12.1	0.97	1
SMAD4	20q-Amp	0.97	1
SLC26A8	Amp_8p11.23	0.97	1
RBBP7	Amp_13q12.13	0.97	1
RB1	Del_17q24.3	0.97	1
TOP2B	Amp_13q22.1	0.97	1
DCLK2	Del_17p12	0.97	1
PTEN	4q-Del	0.97	1
PTEN	Amp_11p15.5	0.97	1
PTEN	Del_18p11.31	0.97	1
HLA-A	7q-Amp	0.97	1
FYN	Del_17p12	0.97	1
LARP4B	Del_15q15.2	0.97	1
GMPS	7q-Amp	0.97	1
BIRC3	Del_17p12	0.97	1
ZNF486	18q-Del	0.97	1
CREBBP	Del_15q11.2	0.97	1
20p-Amp	Del_16q23.1	0.97	1
18p-Del	Amp_12p13.33	0.97	1
1p-Del	Amp_20p11.21	0.97	1
B2M	Amp_8q24.21	0.971	1
SMAD2	Amp_20q11.21	0.971	1
FMN2	Amp_5p12	0.971	1
FMN2	Del_17p12	0.971	1
NF2	Amp_6p21.1	0.971	1
NF2	Del_3p26.3	0.971	1
EGR1	13q-Amp	0.971	1
PRKDC	14q-Del	0.971	1
PRKDC	22q-Del	0.971	1
PRKDC	Del_12p13.1	0.971	1
NF1	18q-Del	0.971	1
NF1	Del_18p11.31	0.971	1
ASXL1	Amp_20p11.21	0.971	1
GRB2	18p-Del	0.971	1
C11orf30	Amp_20p12.1	0.971	1
RB1	Del_15q21.1	0.971	1
TOP2B	17p-Del	0.971	1
BMPR2	7q-Amp	0.971	1
KDM6A	Amp_20q11.21	0.971	1
Amp_20q11.21	Del_6q26	0.971	1
ARID1A	Amp_20p12.1	0.972	1
TP53	NLRC4	0.972	1
FAM123B	Amp_8p11.21	0.972	1
CDH1	1p-Del	0.972	1
NF1	4p-Del	0.972	1
ALPK2	Del_15q22.33	0.972	1
C11orf30	Del_15q22.33	0.972	1
DIP2B	Del_8p22	0.972	1
PIK3R1	8p-Amp	0.972	1
RB1	Del_15q22.33	0.972	1
8p-Amp	Del_4q22.1	0.972	1
Amp_15q26.1	Del_8p23.2	0.972	1
ARID1A	Amp_20p11.21	0.973	1
TP53	FKBP9	0.973	1
SOX9	Del_10q23.31	0.973	1
BCOR	Del_5q21.2	0.973	1
WNT1	Amp_20p11.21	0.973	1
PRKDC	Del_21q21.1	0.973	1
FBXW7	Amp_20p11.21	0.973	1
MGA	Del_1p33	0.973	1
ALG12	18p-Del	0.973	1
NLRC4	Del_5q22.2	0.973	1
IFT57	Amp_8q24.21	0.973	1
ROS1	Amp_20p11.21	0.973	1
RBBP7	20p-Amp	0.973	1
HLA-A	Del_8p23.2	0.973	1
BMPR2	Del_22q13.32	0.973	1
NEXN	Del_15q15.2	0.973	1
KDM6A	Amp_20p11.21	0.973	1
18q-Del	Del_16q23.1	0.973	1
Amp_8p11.23	Del_10q23.31	0.973	1
Amp_19q12	Del_15q15.2	0.973	1
Amp_20p11.21	Del_16q23.1	0.973	1
APC	Del_17q24.3	0.974	1
ARID1A	Amp_17q12	0.974	1
ARID1A	Del_16p13.3	0.974	1
FAM123B	20p-Amp	0.974	1
FAM123B	Amp_16p11.2	0.974	1
MLH1	Del_4q22.1	0.974	1
SMAD2	14q-Del	0.974	1
FMN2	Del_8p22	0.974	1
STARD3NL	17p-Del	0.974	1
FAM9A	Amp_13q12.2	0.974	1
TPRKB	18q-Del	0.974	1
NR1H3	17p-Del	0.974	1
ALPK2	Del_15q11.2	0.974	1
C11orf30	Del_22q13.32	0.974	1
PRRG1	Amp_13q12.13	0.974	1
SLC26A8	Del_15q11.2	0.974	1
PTEN	Amp_6p21.1	0.974	1
PTEN	Del_4q35.1	0.974	1
SETD2	17p-Del	0.974	1
SETD2	22q-Del	0.974	1
SETD2	Del_4p16.1	0.974	1
NEXN	Del_15q21.1	0.974	1
ATM	Amp_17q24.1	0.974	1
IDH1	Del_8p23.2	0.974	1
Amp_17q12	Del_10q25.2	0.974	1
Amp_19q12	Del_14q11.2	0.974	1
Amp_19q12	Del_15q21.1	0.974	1
FMN2	Del_15q11.2	0.975	1
NF2	Del_6q26	0.975	1
FAM9A	Amp_13q22.1	0.975	1
BCL9	8q-Amp	0.975	1
ERBB2	Del_15q22.33	0.975	1
P2RY13	18p-Del	0.975	1
NR1H3	18p-Del	0.975	1
ASXL1	Del_8p23.2	0.975	1
ALG12	Amp_13q22.1	0.975	1
IFT57	20p-Amp	0.975	1
IFT57	Del_8p23.2	0.975	1
RLIM	Amp_20p12.1	0.975	1
MPHOSPH10	7q-Amp	0.975	1
TOP2B	Del_4q35.1	0.975	1
PTEN	18p-Del	0.975	1
PTEN	Del_15q21.1	0.975	1
FYN	Amp_20p11.21	0.975	1
LARP4B	22q-Del	0.975	1
LARP4B	Del_4p16.1	0.975	1
SETD2	Amp_17q24.1	0.975	1
BIRC3	18p-Del	0.975	1
BIRC3	Amp_20p11.21	0.975	1
ZNF486	Del_8p23.2	0.975	1
CREBBP	Amp_17q24.1	0.975	1
12q-Amp	18q-Del	0.975	1
RNF43	Del_10q25.2	0.976	1
TP53	MAP4K3	0.976	1
TP53	SETD2	0.976	1
FAM123B	Del_1p13.2	0.976	1
SOX9	Del_15q15.2	0.976	1
NF1	Amp_11p15.5	0.976	1
NF1	Del_1p13.2	0.976	1
BCL9	15q-Del	0.976	1
IQCD	Amp_20q13.12	0.976	1
NR1H3	Amp_20q13.12	0.976	1
ALPK2	22q-Del	0.976	1
PIK3R1	20p-Del	0.976	1
IFT57	8q-Amp	0.976	1
IFT57	Amp_20q13.12	0.976	1
RB1	8q-Amp	0.976	1
RB1	15q-Del	0.976	1
RB1	Del_6q26	0.976	1
RB1	Del_19p13.3	0.976	1
L1TD1	8q-Amp	0.976	1
L1TD1	Amp_8p11.23	0.976	1
TOP2B	13q-Amp	0.976	1
TOP2B	Del_15q22.33	0.976	1
BMPR2	4p-Del	0.976	1
PRPS1	Del_18q22.1	0.976	1
ZNF486	7p-Amp	0.976	1
CREBBP	8q-Amp	0.976	1
CREBBP	Del_6q26	0.976	1
CTNNB1	Amp_13q12.2	0.976	1
12q-Amp	Del_5q21.2	0.976	1
Amp_19q12	Del_8p22	0.976	1
ARID1A	4p-Del	0.977	1
ARID1A	Amp_8q24.21	0.977	1
FMN2	15q-Del	0.977	1
PRKDC	Amp_17q12	0.977	1
FBXW7	17p-Del	0.977	1
CHUK	Del_21q11.2	0.977	1
ZBTB20	Del_15q15.2	0.977	1
ERBB2	20p-Amp	0.977	1
PCBP1	Amp_8p11.21	0.977	1
ROS1	Del_17q24.3	0.977	1
SMAD4	18p-Del	0.977	1
RB1	17p-Del	0.977	1
PTEN	20p-Amp	0.977	1
FYN	Amp_8p11.21	0.977	1
BIRC3	Amp_8p11.21	0.977	1
ATM	15q-Del	0.977	1
KDM6A	7q-Amp	0.977	1
12p-Amp	Del_17p12	0.977	1
7q-Amp	Del_16q23.1	0.977	1
Amp_20p12.1	Del_6q26	0.977	1
ARID1A	Del_17q24.3	0.978	1
TP53	BMPR2	0.978	1
TP53	2q-Amp	0.978	1
SOX9	Del_5q23.3	0.978	1
SOX9	Del_15q21.1	0.978	1
ACVR1B	Amp_13q22.1	0.978	1
CDH1	Amp_17q12	0.978	1
NF2	Del_15q15.2	0.978	1
FAM9A	Amp_20q13.12	0.978	1
NF1	20p-Amp	0.978	1
P2RY13	Amp_13q12.2	0.978	1
P2RY13	Amp_13q22.1	0.978	1
IQCD	Del_18q12.2	0.978	1
PLEKHF2	Del_17p12	0.978	1
NR1H3	Amp_13q12.2	0.978	1
NR1H3	Amp_13q22.1	0.978	1
NR1H3	Del_18q22.1	0.978	1
C11orf30	14q-Del	0.978	1
DIP2B	Amp_8p11.21	0.978	1
PIK3R1	Amp_13q12.13	0.978	1
IFT57	Del_18q12.2	0.978	1
TOP2B	Del_22q13.32	0.978	1
DCLK2	Amp_13q22.1	0.978	1
FYN	Del_18q22.1	0.978	1
LARP4B	Del_15q11.2	0.978	1
PRPS1	Del_18q21.2	0.978	1
PTGDR	Del_18q21.2	0.978	1
BIRC3	Amp_13q12.2	0.978	1
BIRC3	Del_18q22.1	0.978	1
ZNF486	Del_18q12.2	0.978	1
CREBBP	Del_1p36.11	0.978	1
12q-Amp	Del_4p16.1	0.978	1
Amp_15q26.1	Del_8p22	0.978	1
ARID1A	Del_3q26.31	0.979	1
TP53	ST3GAL6	0.979	1
FAM123B	7p-Amp	0.979	1
MLH1	8q-Amp	0.979	1
SMAD2	Amp_20q12	0.979	1
OR4D10	Del_17p12	0.979	1
PRKDC	Amp_1q31.1	0.979	1
PRKDC	Del_19p13.3	0.979	1
NF1	Del_17q24.3	0.979	1
CHUK	18q-Del	0.979	1
PTCH1	Del_21q21.1	0.979	1
NLRC4	Del_4q22.1	0.979	1
PIK3R1	20p-Amp	0.979	1
PIK3R1	Del_8p23.2	0.979	1
RBPJ	8p-Del	0.979	1
RBBP7	18q-Del	0.979	1
RB1	Del_21q21.1	0.979	1
L1TD1	Del_18p11.31	0.979	1
PTEN	Amp_15q26.1	0.979	1
PTEN	Del_3q26.31	0.979	1
HLA-A	8p-Del	0.979	1
MAP4K3	Del_14q11.2	0.979	1
CDK12	18p-Del	0.979	1
CDK12	Amp_20p11.21	0.979	1
GMPS	8p-Del	0.979	1
ATM	5q-Del	0.979	1
IDH1	Del_14q11.2	0.979	1
CTNNB1	Amp_13q12.13	0.979	1
7p-Amp	Del_22q13.32	0.979	1
8p-Amp	21q-Del	0.979	1
Amp_20q12	Del_6q26	0.979	1
CRIPAK	18p-Del	0.98	1
SOX9	4q-Del	0.98	1
SOX9	Amp_8p11.23	0.98	1
FMN2	Amp_20p11.21	0.98	1
NF2	7q-Amp	0.98	1
TPRKB	Del_18q12.2	0.98	1
BCL9	18q-Del	0.98	1
ERBB2	8p-Amp	0.98	1
IQCD	13q-Amp	0.98	1
NLRC4	Amp_8q24.21	0.98	1
MPHOSPH10	Amp_20q12	0.98	1
SMAD4	Amp_17q24.1	0.98	1
SLC26A8	7q-Amp	0.98	1
RB1	Amp_20p11.21	0.98	1
PTEN	20q-Amp	0.98	1
PTEN	Amp_13q22.1	0.98	1
FYN	Del_18q21.2	0.98	1
SLC12A6	Amp_8q24.21	0.98	1
GMPS	13q-Amp	0.98	1
BIRC3	Del_18q21.2	0.98	1
ZNF486	13q-Amp	0.98	1
12p-Amp	Del_15q15.2	0.98	1
12q-Amp	Del_18q22.1	0.98	1
8p-Amp	Del_22q13.32	0.98	1
Amp_8p11.21	Del_1p33	0.98	1
RNF43	Del_21q11.2	0.981	1
TP53	MVK	0.981	1
CDH1	Del_1p36.11	0.981	1
CDH1	Del_17q24.3	0.981	1
BCOR	Amp_20p12.1	0.981	1
BCOR	Del_17p12	0.981	1
SMAD2	Del_15q15.2	0.981	1
NF2	Del_8p23.2	0.981	1
PRKDC	Del_4q35.1	0.981	1
MGA	Del_1p36.11	0.981	1
BCL9	18p-Del	0.981	1
ALPK2	14q-Del	0.981	1
PTCH1	7q-Amp	0.981	1
PTCH1	Amp_17q12	0.981	1
NLRC4	Amp_20p11.21	0.981	1
DIP2B	Amp_20p12.1	0.981	1
MPHOSPH10	Del_8p23.2	0.981	1
C2orf29	Amp_20p12.1	0.981	1
RBPJ	Del_8p22	0.981	1
SMAD4	16p-Amp	0.981	1
SLC26A8	Amp_20p12.1	0.981	1
TOP2B	14q-Del	0.981	1
FKBP9	Amp_20p12.1	0.981	1
CDK12	22q-Del	0.981	1
CTNNB1	18p-Del	0.981	1
12p-Amp	Del_14q11.2	0.981	1
12p-Amp	Del_15q21.1	0.981	1
8p-Amp	22q-Del	0.981	1
8p-Amp	Del_4p16.1	0.981	1
TP53	DDX26B	0.982	1
SMAD2	Del_14q11.2	0.982	1
SMAD2	Del_15q21.1	0.982	1
NF2	Amp_13q12.2	0.982	1
NF2	Del_17p12	0.982	1
EGR1	Amp_20p11.21	0.982	1
PRKDC	Amp_5p12	0.982	1
NF1	Amp_20p12.1	0.982	1
NF1	Del_17p12	0.982	1
MGA	Del_5q23.3	0.982	1
BCL9	Del_4q35.1	0.982	1
IQCD	Del_8p22	0.982	1
PTCH1	Del_21q11.2	0.982	1
PIK3R1	Amp_20p12.1	0.982	1
IFT57	Del_8p22	0.982	1
PTEN	9p-Amp	0.982	1
PTEN	Del_19p13.3	0.982	1
SLC12A6	20p-Amp	0.982	1
ATM	Amp_13q12.2	0.982	1
ZNF486	Del_8p22	0.982	1
6p-Amp	Del_17p12	0.982	1
ARID1A	13q-Amp	0.983	1
EGR1	Amp_13q12.2	0.983	1
PRKDC	Del_1p36.11	0.983	1
NF1	Del_6q26	0.983	1
ERBB2	Del_18q12.2	0.983	1
P2RY13	Amp_13q12.13	0.983	1
PLEKHF2	Amp_13q12.2	0.983	1
NR1H3	Amp_13q12.13	0.983	1
ALPK2	7q-Amp	0.983	1
ALG12	18q-Del	0.983	1
PTCH1	20p-Del	0.983	1
C11orf30	Amp_20p11.21	0.983	1
DIP2B	Del_8p23.2	0.983	1
PIK3R1	Amp_1q31.1	0.983	1
PIK3R1	Amp_17q24.1	0.983	1
RLIM	Del_18q21.2	0.983	1
DDX26B	Amp_8p11.21	0.983	1
SLC26A8	Amp_13q22.1	0.983	1
RB1	21q-Del	0.983	1
PTEN	13q-Amp	0.983	1
PTEN	Amp_20q12	0.983	1
MAP4K3	Del_8p22	0.983	1
CREBBP	7q-Amp	0.983	1
CREBBP	Del_15q21.1	0.983	1
22q-Del	Amp_12p13.33	0.983	1
Amp_8p11.23	Del_1p13.2	0.983	1
ARID1A	Del_5q23.3	0.984	1
FAM123B	17p-Del	0.984	1
FAM123B	Amp_13q12.2	0.984	1
SOX9	Del_15q11.2	0.984	1
ACVR1B	Amp_13q12.13	0.984	1
CDH1	17p-Del	0.984	1
CDH1	Amp_8q24.21	0.984	1
CDH1	Del_21q11.2	0.984	1
MLH1	17p-Del	0.984	1
RHOA	Del_18p11.31	0.984	1
FBXW7	Del_4q22.1	0.984	1
MGA	Del_1p13.2	0.984	1
ERBB2	18p-Del	0.984	1
NLRC4	Amp_13q12.2	0.984	1
DIP2B	20q-Amp	0.984	1
DIP2B	7q-Amp	0.984	1
PIK3R1	Amp_13q22.1	0.984	1
RSPH3	18q-Del	0.984	1
PTEN	14q-Del	0.984	1
BMPR2	8p-Del	0.984	1
BCORL1	Amp_13q12.2	0.984	1
SETD2	7p-Amp	0.984	1
SLC12A6	17p-Del	0.984	1
CDK12	Del_8p22	0.984	1
ATM	4q-Del	0.984	1
ATM	Del_1p13.2	0.984	1
ZNF486	Amp_20p12.1	0.984	1
KDM6A	Del_18p11.31	0.984	1
KDM6A	Del_21q21.1	0.984	1
20p-Amp	Del_5q23.3	0.984	1
7q-Amp	22q-Del	0.984	1
8p-Amp	Del_21q11.2	0.984	1
Amp_12p13.33	Del_18p11.31	0.984	1
FAM123B	13q-Amp	0.985	1
CDH1	Del_21q21.1	0.985	1
MLH1	Del_17p12	0.985	1
STARD3NL	20q-Amp	0.985	1
OR4D10	Amp_13q12.2	0.985	1
MAPK6	Amp_20q11.21	0.985	1
FAM9A	17p-Del	0.985	1
NF1	17p-Del	0.985	1
NF1	Del_18q21.2	0.985	1
FBXW7	5q-Del	0.985	1
CHUK	Amp_8q24.21	0.985	1
CHUK	Del_14q11.2	0.985	1
MGA	Del_5q12.1	0.985	1
NR1H3	20q-Amp	0.985	1
ASXL1	13q-Amp	0.985	1
GRB2	17p-Del	0.985	1
NLRC4	Amp_13q22.1	0.985	1
C11orf30	Del_14q11.2	0.985	1
SMAD4	Del_3p26.3	0.985	1
FYN	20q-Amp	0.985	1
LARP4B	Del_5q22.2	0.985	1
MAP4K3	Del_18p11.31	0.985	1
SETD2	Del_5q23.3	0.985	1
BIRC3	20q-Amp	0.985	1
ATM	Del_15q11.2	0.985	1
CREBBP	Del_21q11.2	0.985	1
CTNNB1	Del_18p11.31	0.985	1
KDM6A	20q-Amp	0.985	1
KDM6A	Del_4q22.1	0.985	1
7q-Amp	Del_10q23.31	0.985	1
7q-Amp	Del_22q13.32	0.985	1
20p-Del	Amp_20p11.21	0.985	1
SOX9	Amp_17q12	0.986	1
B2M	Amp_8p11.21	0.986	1
CDH1	Amp_20q11.21	0.986	1
MLH1	Del_21q11.2	0.986	1
SMAD2	Del_15q11.2	0.986	1
FMN2	Del_17q24.3	0.986	1
OR4D10	Amp_13q22.1	0.986	1
NF2	17p-Del	0.986	1
RHOA	Del_18q22.1	0.986	1
RPTN	Amp_8p11.21	0.986	1
FBXW7	Amp_11p15.5	0.986	1
FBXW7	Amp_20p12.1	0.986	1
FBXW7	Del_18q12.2	0.986	1
CHUK	Del_8p23.2	0.986	1
BCL9	Amp_20p12.1	0.986	1
IQCD	Del_17p12	0.986	1
IQCD	Del_18q22.1	0.986	1
ALPK2	Del_5q23.3	0.986	1
PTCH1	Amp_13q12.2	0.986	1
NLRC4	Del_21q11.2	0.986	1
C11orf30	20p-Amp	0.986	1
C11orf30	Del_8p23.2	0.986	1
PIK3R1	Amp_20q12	0.986	1
IFT57	Del_17p12	0.986	1
IFT57	Del_18q22.1	0.986	1
MPHOSPH10	13q-Amp	0.986	1
SMAD4	1p-Del	0.986	1
RBBP7	Del_18q12.2	0.986	1
RB1	Del_5q23.3	0.986	1
L1TD1	18p-Del	0.986	1
TOP2B	20q-Amp	0.986	1
TOP2B	Del_1p36.11	0.986	1
HLA-A	Amp_8p11.21	0.986	1
HLA-A	Del_17p12	0.986	1
BCORL1	Amp_20p12.1	0.986	1
MAP4K3	18q-Del	0.986	1
SETD2	Del_8p23.2	0.986	1
NEXN	18p-Del	0.986	1
ATM	Del_17q24.3	0.986	1
ATM	Del_22q13.32	0.986	1
CTNNB1	13q-Amp	0.986	1
12q-Amp	Del_17p12	0.986	1
Amp_8p11.23	Del_22q13.32	0.986	1
ARID1A	Del_17p12	0.987	1
CRIPAK	Amp_20q12	0.987	1
FAM123B	14q-Del	0.987	1
FAM123B	4p-Del	0.987	1
B2M	17p-Del	0.987	1
SMAD2	13q-Amp	0.987	1
SMAD2	Amp_20q13.12	0.987	1
STARD3NL	7p-Amp	0.987	1
NF2	7p-Amp	0.987	1
RHOA	Del_18q21.2	0.987	1
EGR1	Amp_13q12.13	0.987	1
PRKDC	Del_14q11.2	0.987	1
NF1	Del_8q11.1	0.987	1
FBXW7	4p-Del	0.987	1
FBXW7	Del_1p33	0.987	1
CHUK	Del_18q12.2	0.987	1
TPRKB	Del_18q22.1	0.987	1
ZBTB20	7q-Amp	0.987	1
P2RY13	7p-Amp	0.987	1
IQCD	Del_18q21.2	0.987	1
PLEKHF2	Amp_13q12.13	0.987	1
ALPK2	7p-Amp	0.987	1
ALPK2	Del_8p22	0.987	1
ASXL1	18p-Del	0.987	1
ALG12	Del_18q12.2	0.987	1
NLRC4	14q-Del	0.987	1
PRRG1	Del_18q12.2	0.987	1
PCBP1	7p-Amp	0.987	1
PCBP1	8q-Amp	0.987	1
IFT57	Del_18q21.2	0.987	1
RLIM	18q-Del	0.987	1
ROS1	Del_1p36.11	0.987	1
ROS1	Del_21q21.1	0.987	1
MPHOSPH10	Amp_20q13.12	0.987	1
MPHOSPH10	Del_8p22	0.987	1
SLC26A8	8p-Del	0.987	1
RBBP7	17p-Del	0.987	1
RB1	8p-Amp	0.987	1
FKBP9	Del_8p23.2	0.987	1
PTEN	Amp_5p12	0.987	1
PTEN	Del_21q21.1	0.987	1
BMPR2	Del_4p16.1	0.987	1
FYN	8q-Amp	0.987	1
MAP4K3	7q-Amp	0.987	1
SETD2	4q-Del	0.987	1
SETD2	Amp_11p15.5	0.987	1
SETD2	Del_1p13.2	0.987	1
CDK12	Del_18p11.31	0.987	1
NEXN	Amp_20q13.12	0.987	1
BIRC3	8q-Amp	0.987	1
ZNF486	Del_18q21.2	0.987	1
KDM6A	Del_4q35.1	0.987	1
12p-Amp	Del_18p11.31	0.987	1
12q-Amp	Del_5q22.2	0.987	1
Amp_12p13.33	Del_15q15.2	0.987	1
ARID1A	Del_3p26.3	0.988	1
RNF43	Del_5q23.3	0.988	1
FAM123B	Del_8p23.2	0.988	1
SOX9	7p-Amp	0.988	1
SOX9	8q-Amp	0.988	1
STARD3NL	Amp_20q11.21	0.988	1
NF2	21q-Del	0.988	1
NF2	Amp_11p15.5	0.988	1
NF2	Del_1p13.2	0.988	1
NF2	Del_21q21.1	0.988	1
RHOA	18p-Del	0.988	1
PRKDC	Del_21q11.2	0.988	1
NF1	Del_18q22.1	0.988	1
TPRKB	Del_18q21.2	0.988	1
ERBB2	18q-Del	0.988	1
ERBB2	Amp_20q11.21	0.988	1
ERBB2	Del_1p36.11	0.988	1
P2RY13	18q-Del	0.988	1
NR1H3	18q-Del	0.988	1
NR1H3	Amp_20q11.21	0.988	1
ALPK2	Del_1p13.2	0.988	1
PTCH1	Amp_13q22.1	0.988	1
PIK3R1	13q-Amp	0.988	1
IFT57	20q-Amp	0.988	1
IFT57	18p-Del	0.988	1
ROS1	Amp_13q12.13	0.988	1
RB1	20p-Amp	0.988	1
TOP2B	Del_14q11.2	0.988	1
FYN	Amp_20q11.21	0.988	1
MAP4K3	Del_17p12	0.988	1
SETD2	Del_5q12.1	0.988	1
BIRC3	Amp_20q11.21	0.988	1
ATM	13q-Amp	0.988	1
ZNF486	20q-Amp	0.988	1
ZNF486	18p-Del	0.988	1
CREBBP	15q-Del	0.988	1
KDM6A	Del_17p12	0.988	1
Amp_12p13.33	Del_15q22.33	0.988	1
ARID1A	Amp_13q12.2	0.989	1
RNF43	Amp_11p15.5	0.989	1
RNF43	Del_1p13.2	0.989	1
SOX9	Amp_13q12.13	0.989	1
BCOR	Del_4q22.1	0.989	1
SMAD2	Del_18q22.1	0.989	1
STARD3NL	Del_8p23.2	0.989	1
OR4D10	Amp_13q12.13	0.989	1
MAPK6	Amp_20q12	0.989	1
FAM9A	Del_18q12.2	0.989	1
NF1	20p-Del	0.989	1
NF1	Amp_20q13.12	0.989	1
ERBB2	Del_18p11.31	0.989	1
P2RY13	20p-Amp	0.989	1
ASXL1	Amp_20q11.21	0.989	1
PTCH1	Amp_13q12.13	0.989	1
PTCH1	Del_10q25.2	0.989	1
NLRC4	Amp_8p11.21	0.989	1
NLRC4	Amp_13q12.13	0.989	1
DIP2B	Amp_20q11.21	0.989	1
PRRG1	Amp_20p12.1	0.989	1
PRRG1	Del_18p11.31	0.989	1
RSPH3	Del_18q12.2	0.989	1
RLIM	Del_18p11.31	0.989	1
ROS1	Amp_1q31.1	0.989	1
ROS1	Amp_17q24.1	0.989	1
C2orf29	Amp_20q12	0.989	1
DDX26B	Amp_13q12.13	0.989	1
RB1	Del_10q25.2	0.989	1
RB1	Del_17p12	0.989	1
L1TD1	8p-Del	0.989	1
BCORL1	Amp_13q12.13	0.989	1
GPATCH8	Del_8p23.2	0.989	1
MAP4K3	Amp_20p12.1	0.989	1
CDK12	Amp_13q12.13	0.989	1
CDK12	Del_5q22.2	0.989	1
NEXN	20q-Amp	0.989	1
BIRC3	20p-Amp	0.989	1
CTNNB1	Amp_20p12.1	0.989	1
12p-Amp	Del_15q22.33	0.989	1
21q-Del	Amp_8p11.21	0.989	1
22q-Del	Amp_8p11.23	0.989	1
Amp_12p13.33	Del_15q21.1	0.989	1
ARID1A	Amp_13q12.13	0.99	1
ARID1A	Amp_13q22.1	0.99	1
ARID1A	Del_8p23.2	0.99	1
SOX9	17p-Del	0.99	1
ACVR1B	Del_8p23.2	0.99	1
EGR1	17p-Del	0.99	1
NF1	1p-Del	0.99	1
NF1	Del_4q22.1	0.99	1
NF1	Del_18q12.2	0.99	1
IQCD	Amp_13q12.2	0.99	1
IQCD	Amp_13q22.1	0.99	1
IQCD	Amp_20q11.21	0.99	1
ASXL1	Amp_13q12.2	0.99	1
ASXL1	Del_18p11.31	0.99	1
C11orf30	17p-Del	0.99	1
ROS1	Amp_13q12.2	0.99	1
MPHOSPH10	20q-Amp	0.99	1
DDX26B	8q-Amp	0.99	1
SMAD4	Del_17p12	0.99	1
L1TD1	Amp_8q24.21	0.99	1
TOP2B	Amp_13q12.2	0.99	1
TOP2B	Amp_20q11.21	0.99	1
PTEN	Del_4q22.1	0.99	1
PTEN	Del_18q22.1	0.99	1
LARP4B	7p-Amp	0.99	1
MAP4K3	18p-Del	0.99	1
ZNF486	Amp_13q12.2	0.99	1
KDM6A	20p-Amp	0.99	1
KDM6A	Del_21q11.2	0.99	1
20p-Amp	Del_6q26	0.99	1
CRIPAK	20q-Amp	0.991	1
RNF43	Amp_8q24.21	0.991	1
TP53	Amp_11p15.5	0.991	1
SOX9	Amp_8p11.21	0.991	1
SOX9	Del_21q11.2	0.991	1
ACVR1B	Amp_20p11.21	0.991	1
SMAD2	18q-Del	0.991	1
STARD3NL	Amp_20q12	0.991	1
NF2	Amp_13q12.13	0.991	1
EGR1	18q-Del	0.991	1
PRKDC	Amp_11p15.5	0.991	1
PRKDC	Del_1p13.2	0.991	1
NF1	20q-Amp	0.991	1
BCL9	Del_18p11.31	0.991	1
PLEKHF2	18q-Del	0.991	1
NR1H3	Amp_20q12	0.991	1
ASXL1	Amp_13q22.1	0.991	1
ALG12	Del_18q21.2	0.991	1
ALG12	Del_18q22.1	0.991	1
PRRG1	Del_17p12	0.991	1
RSPH3	20q-Amp	0.991	1
RLIM	Del_18q12.2	0.991	1
VCX2	ATM	0.991	1
RB1	Del_18p11.31	0.991	1
L1TD1	20p-Amp	0.991	1
TOP2B	8q-Amp	0.991	1
FKBP9	Del_8p22	0.991	1
FYN	Amp_20q12	0.991	1
BCORL1	Del_18p11.31	0.991	1
MAP4K3	Del_18q12.2	0.991	1
SETD2	Amp_17q12	0.991	1
NEXN	Amp_20q11.21	0.991	1
GMPS	Amp_13q22.1	0.991	1
BIRC3	13q-Amp	0.991	1
BIRC3	Amp_20q12	0.991	1
ATM	17p-Del	0.991	1
KDM6A	14q-Del	0.991	1
KDM6A	17p-Del	0.991	1
KDM6A	18p-Del	0.991	1
ARID1A	Amp_1q31.1	0.992	1
CRIPAK	14q-Del	0.992	1
FAM123B	Amp_13q12.13	0.992	1
ACVR1B	Amp_13q12.2	0.992	1
CDH1	21q-Del	0.992	1
MLH1	Del_21q21.1	0.992	1
STARD3NL	Del_8p22	0.992	1
NF2	Amp_13q22.1	0.992	1
PRKDC	Del_8p22	0.992	1
PRKDC	Del_17q24.3	0.992	1
NF1	Del_15q11.2	0.992	1
FBXW7	Del_12p13.1	0.992	1
MGA	Del_22q13.32	0.992	1
TPRKB	Del_18p11.31	0.992	1
ZBTB20	Amp_13q12.2	0.992	1
P2RY13	Del_18q12.2	0.992	1
IQCD	Amp_13q12.13	0.992	1
NR1H3	Del_18q12.2	0.992	1
NLRC4	Amp_8p11.23	0.992	1
NLRC4	Del_14q11.2	0.992	1
C11orf30	Del_8p22	0.992	1
DIP2B	Amp_20q12	0.992	1
PIK3R1	Amp_11p15.5	0.992	1
ROS1	13q-Amp	0.992	1
MPHOSPH10	Amp_20q11.21	0.992	1
DDX26B	20p-Amp	0.992	1
RB1	5q-Del	0.992	1
RB1	Del_3q26.31	0.992	1
PTEN	Del_17q24.3	0.992	1
GPATCH8	Amp_20p12.1	0.992	1
GPATCH8	Del_8p22	0.992	1
MAP4K3	Amp_13q12.2	0.992	1
SETD2	13q-Amp	0.992	1
SETD2	Del_4q35.1	0.992	1
SETD2	Del_15q11.2	0.992	1
SLC12A6	Del_14q11.2	0.992	1
CDK12	Del_4q22.1	0.992	1
NEXN	Del_18q22.1	0.992	1
BIRC3	Del_8p22	0.992	1
ATM	Del_15q22.33	0.992	1
IDH1	8p-Del	0.992	1
ZNF486	Amp_13q12.13	0.992	1
ZNF486	Amp_20q12	0.992	1
KDM6A	Amp_13q12.2	0.992	1
KDM6A	Amp_20q12	0.992	1
KDM6A	Del_18q22.1	0.992	1
12q-Amp	Del_4q35.1	0.992	1
12q-Amp	Del_15q22.33	0.992	1
ARID1A	18q-Del	0.993	1
ARID1A	Del_8p22	0.993	1
CRIPAK	Amp_20q11.21	0.993	1
FAM123B	Del_17p12	0.993	1
SOX9	Amp_13q22.1	0.993	1
SOX9	Del_5q21.2	0.993	1
B2M	7p-Amp	0.993	1
CDH1	Amp_20q12	0.993	1
BCOR	14q-Del	0.993	1
MAPK6	Amp_20q13.12	0.993	1
MAPK6	Del_18p11.31	0.993	1
FAM9A	Del_8p23.2	0.993	1
EGR1	Del_18q12.2	0.993	1
PRKDC	Del_4q22.1	0.993	1
NF1	Del_15q15.2	0.993	1
FBXW7	Del_15q11.2	0.993	1
CHUK	20q-Amp	0.993	1
CHUK	Amp_20q13.12	0.993	1
CHUK	Del_18q22.1	0.993	1
BCL9	Del_17p12	0.993	1
IQCD	17p-Del	0.993	1
PLEKHF2	Del_18q12.2	0.993	1
ASXL1	20q-Amp	0.993	1
ASXL1	Amp_20q12	0.993	1
GRB2	Del_8p23.2	0.993	1
NLRC4	Amp_20q12	0.993	1
DIP2B	14q-Del	0.993	1
PRRG1	18p-Del	0.993	1
PIK3R1	20q-Amp	0.993	1
IFT57	17p-Del	0.993	1
RSPH3	Del_18q21.2	0.993	1
RSPH3	Del_18q22.1	0.993	1
ROS1	Del_8p22	0.993	1
C2orf29	Amp_20q13.12	0.993	1
RBBP7	7p-Amp	0.993	1
RBBP7	Del_18q21.2	0.993	1
TOP2B	Amp_13q12.13	0.993	1
TOP2B	Amp_20q12	0.993	1
FKBP9	17p-Del	0.993	1
PTEN	Del_3p26.3	0.993	1
HLA-A	7p-Amp	0.993	1
LARP4B	14q-Del	0.993	1
BCORL1	Del_17p12	0.993	1
12p-Amp	14q-Del	0.993	1
12q-Amp	Del_8p22	0.993	1
12q-Amp	Del_22q13.32	0.993	1
6p-Amp	Del_18q12.2	0.993	1
APC	6p-Amp	0.994	1
TP53	SOX9	0.994	1
FAM123B	Amp_13q22.1	0.994	1
SOX9	18q-Del	0.994	1
SOX9	Del_18q21.2	0.994	1
ACVR1B	Del_15q15.2	0.994	1
ACVR1B	Del_15q21.1	0.994	1
CDH1	20p-Amp	0.994	1
MLH1	Amp_13q22.1	0.994	1
SMAD2	Del_18q12.2	0.994	1
STARD3NL	Amp_20q13.12	0.994	1
OR4D10	13q-Amp	0.994	1
NF2	Del_15q21.1	0.994	1
NF1	Del_15q21.1	0.994	1
FBXW7	Del_10q25.2	0.994	1
CHUK	Del_18q21.2	0.994	1
TPRKB	18p-Del	0.994	1
BCL9	Del_18q22.1	0.994	1
ZBTB20	Amp_13q12.13	0.994	1
NR1H3	Del_17p12	0.994	1
ALPK2	13q-Amp	0.994	1
PTCH1	17p-Del	0.994	1
PLAGL2	20q-Amp	0.994	1
C11orf30	Del_17p12	0.994	1
PIK3R1	Amp_8p11.21	0.994	1
ROS1	17p-Del	0.994	1
ROS1	Del_21q11.2	0.994	1
MPHOSPH10	Amp_13q12.2	0.994	1
MPHOSPH10	Amp_13q22.1	0.994	1
C2orf29	Del_17p12	0.994	1
DDX26B	13q-Amp	0.994	1
DDX26B	Amp_20p12.1	0.994	1
L1TD1	Amp_8p11.21	0.994	1
HLA-A	Amp_8q24.21	0.994	1
FYN	Amp_20q13.12	0.994	1
MAP4K3	20p-Amp	0.994	1
MAP4K3	Amp_13q12.13	0.994	1
SETD2	Del_22q13.32	0.994	1
CDK12	18q-Del	0.994	1
CDK12	Amp_13q12.2	0.994	1
CDK12	Amp_13q22.1	0.994	1
NEXN	18q-Del	0.994	1
NEXN	Amp_20q12	0.994	1
BIRC3	Amp_20q13.12	0.994	1
ATM	Amp_13q12.13	0.994	1
ATM	Amp_17q12	0.994	1
ATM	Del_19p13.3	0.994	1
CREBBP	Amp_8p11.21	0.994	1
CREBBP	Del_14q11.2	0.994	1
CREBBP	Del_15q15.2	0.994	1
CREBBP	Del_15q22.33	0.994	1
CTNNB1	20q-Amp	0.994	1
CTNNB1	Amp_13q22.1	0.994	1
KDM6A	Del_14q11.2	0.994	1
KDM6A	Del_15q15.2	0.994	1
KDM6A	Del_15q21.1	0.994	1
APC	Del_16q23.1	0.995	1
ARID1A	20p-Amp	0.995	1
ARID1A	17p-Del	0.995	1
RNF43	Del_22q13.32	0.995	1
SOX9	Del_14q11.2	0.995	1
SOX9	Del_17p12	0.995	1
B2M	Del_8p23.2	0.995	1
ACVR1B	Del_8p22	0.995	1
CDH1	Amp_20q13.12	0.995	1
MLH1	20p-Amp	0.995	1
SMAD2	Amp_13q12.2	0.995	1
SMAD2	Amp_13q22.1	0.995	1
FMN2	7p-Amp	0.995	1
STARD3NL	18p-Del	0.995	1
STARD3NL	Amp_20p11.21	0.995	1
NF2	Del_21q11.2	0.995	1
MAPK6	20q-Amp	0.995	1
RHOA	18q-Del	0.995	1
FAM9A	Del_8p22	0.995	1
FAM9A	Del_18p11.31	0.995	1
EGR1	Del_8p23.2	0.995	1
PRKDC	Del_15q15.2	0.995	1
FBXW7	Amp_1q31.1	0.995	1
FBXW7	Del_17q24.3	0.995	1
FBXW7	Del_19p13.3	0.995	1
CHUK	Amp_20q11.21	0.995	1
MGA	22q-Del	0.995	1
MGA	Del_4p16.1	0.995	1
BCL9	20p-Amp	0.995	1
BCL9	Amp_8q24.21	0.995	1
BCL9	Del_8p23.2	0.995	1
BCL9	Del_18q21.2	0.995	1
P2RY13	Amp_20p11.21	0.995	1
P2RY13	Del_18q22.1	0.995	1
ST3GAL6	20q-Amp	0.995	1
PTCH1	13q-Amp	0.995	1
NLRC4	20p-Amp	0.995	1
NLRC4	8q-Amp	0.995	1
PLAGL2	Amp_20q11.21	0.995	1
C11orf30	8p-Del	0.995	1
RLIM	Del_18q22.1	0.995	1
ROS1	Del_18p11.31	0.995	1
MPHOSPH10	7p-Amp	0.995	1
C2orf29	20q-Amp	0.995	1
RBPJ	Del_8p23.2	0.995	1
L1TD1	17p-Del	0.995	1
DCLK2	18p-Del	0.995	1
PTEN	Amp_20p12.1	0.995	1
PTEN	Del_18q21.2	0.995	1
BMPR2	Del_4q22.1	0.995	1
ALDH1A3	20q-Amp	0.995	1
ALDH1A3	Amp_20p11.21	0.995	1
LARP4B	20p-Amp	0.995	1
LARP4B	Del_1p36.11	0.995	1
BCORL1	20p-Amp	0.995	1
BCORL1	18p-Del	0.995	1
BCORL1	Del_8p23.2	0.995	1
GPATCH8	Amp_20p11.21	0.995	1
MAP4K3	Del_18q22.1	0.995	1
SETD2	7q-Amp	0.995	1
SETD2	Amp_13q12.2	0.995	1
SETD2	Amp_13q22.1	0.995	1
SLC12A6	7p-Amp	0.995	1
CDK12	Del_18q22.1	0.995	1
NEXN	Del_18p11.31	0.995	1
GMPS	Del_8p23.2	0.995	1
ATM	Del_18p11.31	0.995	1
ZNF486	Amp_20q13.12	0.995	1
KDM6A	Amp_13q12.13	0.995	1
20q-Amp	Del_16q23.1	0.995	1
15q-Del	Amp_12p13.33	0.995	1
ARID1A	Del_10q23.31	0.996	1
B2M	Amp_20p12.1	0.996	1
ACVR1B	Del_15q11.2	0.996	1
MLH1	Del_5q23.3	0.996	1
MLH1	Del_18p11.31	0.996	1
BCOR	Del_14q11.2	0.996	1
SMAD2	Del_8p23.2	0.996	1
FMN2	Amp_20p12.1	0.996	1
FMN2	Del_4p16.1	0.996	1
NF2	20q-Amp	0.996	1
NF2	Del_15q11.2	0.996	1
RHOA	Del_18q12.2	0.996	1
FAM9A	Del_17p12	0.996	1
EGR1	Del_18q21.2	0.996	1
EGR1	Del_18q22.1	0.996	1
PRKDC	Del_8p23.2	0.996	1
PRKDC	Del_15q21.1	0.996	1
PRKDC	Del_22q13.32	0.996	1
NF1	Amp_20q11.21	0.996	1
NF1	Del_21q21.1	0.996	1
FBXW7	Del_1p36.11	0.996	1
FBXW7	Del_4q35.1	0.996	1
FBXW7	Del_5q21.2	0.996	1
CHUK	Amp_20q12	0.996	1
BCL9	17p-Del	0.996	1
ZBTB20	13q-Amp	0.996	1
P2RY13	Del_18q21.2	0.996	1
ST3GAL6	13q-Amp	0.996	1
ST3GAL6	Amp_20q11.21	0.996	1
PLEKHF2	13q-Amp	0.996	1
PLEKHF2	Del_18q21.2	0.996	1
PLEKHF2	Del_18q22.1	0.996	1
NR1H3	Del_18q21.2	0.996	1
ALPK2	Amp_13q22.1	0.996	1
ALPK2	Del_5q21.2	0.996	1
ALPK2	Del_8p23.2	0.996	1
ASXL1	20p-Amp	0.996	1
PTCH1	Del_3p26.3	0.996	1
NLRC4	Amp_20q13.12	0.996	1
PLAGL2	Amp_20q12	0.996	1
DIP2B	18q-Del	0.996	1
DIP2B	Amp_20q13.12	0.996	1
DIP2B	Del_14q11.2	0.996	1
DIP2B	Del_18q22.1	0.996	1
RSPH3	Amp_20q13.12	0.996	1
MPHOSPH10	Amp_13q12.13	0.996	1
RBPJ	Amp_20p12.1	0.996	1
SMAD4	20p-Del	0.996	1
SLC26A8	Amp_13q12.2	0.996	1
L1TD1	Del_17p12	0.996	1
TOP2B	8p-Del	0.996	1
TOP2B	Amp_20q13.12	0.996	1
TOP2B	Del_17p12	0.996	1
FKBP9	Amp_13q12.2	0.996	1
HLA-A	13q-Amp	0.996	1
BMPR2	Del_4q35.1	0.996	1
BMPR2	Del_15q22.33	0.996	1
LARP4B	Del_14q11.2	0.996	1
MAP4K3	13q-Amp	0.996	1
MAP4K3	Del_18q21.2	0.996	1
SETD2	21q-Del	0.996	1
GMPS	20q-Amp	0.996	1
BIRC3	Amp_13q22.1	0.996	1
CREBBP	14q-Del	0.996	1
CREBBP	Amp_8q24.21	0.996	1
CREBBP	Amp_20p11.21	0.996	1
CTNNB1	20p-Amp	0.996	1
KDM6A	Amp_20q13.12	0.996	1
12q-Amp	Del_8p23.2	0.996	1
20q-Amp	Del_6q26	0.996	1
9p-Amp	Del_1p36.11	0.996	1
Amp_20q11.21	Del_16q23.1	0.996	1
ARID1A	Del_22q13.32	0.997	1
RNF43	22q-Del	0.997	1
RNF43	Del_4p16.1	0.997	1
TP53	BCL9	0.997	1
TP53	12p-Amp	0.997	1
SOX9	13q-Amp	0.997	1
SOX9	Amp_20q11.21	0.997	1
SOX9	Del_18q12.2	0.997	1
SOX9	Del_18q22.1	0.997	1
B2M	Del_8p22	0.997	1
B2M	Del_18p11.31	0.997	1
MLH1	Del_5q12.1	0.997	1
SMAD2	Del_8p22	0.997	1
NF2	Amp_20q11.21	0.997	1
NF2	Amp_20q12	0.997	1
NF2	Del_18p11.31	0.997	1
RHOA	Del_8p23.2	0.997	1
FAM9A	18p-Del	0.997	1
EGR1	Del_8p22	0.997	1
EGR1	Del_18p11.31	0.997	1
PRKDC	17p-Del	0.997	1
PRKDC	Del_10q25.2	0.997	1
NF1	21q-Del	0.997	1
NF1	Del_21q11.2	0.997	1
FBXW7	20p-Amp	0.997	1
FBXW7	18q-Del	0.997	1
FBXW7	Del_4p16.1	0.997	1
BCL9	Del_8p22	0.997	1
ST3GAL6	Amp_20q12	0.997	1
ST3GAL6	Del_18p11.31	0.997	1
IQCD	20p-Amp	0.997	1
PLEKHF2	Del_18p11.31	0.997	1
ASXL1	Amp_20q13.12	0.997	1
ASXL1	Del_17p12	0.997	1
ASXL1	Del_18q22.1	0.997	1
NLRC4	Amp_20q11.21	0.997	1
PLAGL2	Amp_20q13.12	0.997	1
DIP2B	Del_18q21.2	0.997	1
PRRG1	18q-Del	0.997	1
RBPJ	Del_18p11.31	0.997	1
RB1	Amp_11p15.5	0.997	1
TOP2B	18p-Del	0.997	1
FKBP9	Amp_13q12.13	0.997	1
PTEN	21q-Del	0.997	1
PTEN	Del_17p12	0.997	1
HLA-A	Del_18q12.2	0.997	1
BMPR2	7p-Amp	0.997	1
FYN	17p-Del	0.997	1
ALDH1A3	Amp_20q12	0.997	1
BCORL1	13q-Amp	0.997	1
BCORL1	8p-Del	0.997	1
BCORL1	Del_8p22	0.997	1
SLC12A6	8p-Del	0.997	1
CDK12	Amp_20p12.1	0.997	1
CDK12	Del_8p23.2	0.997	1
CDK12	Del_17p12	0.997	1
CDK12	Del_18q12.2	0.997	1
NEXN	Del_18q12.2	0.997	1
GMPS	Amp_20q11.21	0.997	1
GMPS	Del_8p22	0.997	1
ATM	Del_4q22.1	0.997	1
CREBBP	Amp_20p12.1	0.997	1
12p-Amp	Del_15q11.2	0.997	1
12q-Amp	18p-Del	0.997	1
12q-Amp	Del_14q11.2	0.997	1
12q-Amp	Del_15q15.2	0.997	1
12q-Amp	Del_15q21.1	0.997	1
Amp_8p11.21	Del_3p26.3	0.997	1
ARID1A	9p-Amp	0.998	1
ARID1A	Del_10q21.1	0.998	1
ARID1A	Del_18q12.2	0.998	1
TP53	FAM9A	0.998	1
TP53	NR1H3	0.998	1
TP53	ZNF486	0.998	1
FAM123B	Amp_17q12	0.998	1
FAM123B	Amp_20p11.21	0.998	1
SOX9	20q-Amp	0.998	1
SOX9	Amp_8q24.21	0.998	1
SOX9	Amp_13q12.2	0.998	1
SOX9	Del_4q35.1	0.998	1
B2M	18p-Del	0.998	1
B2M	Amp_13q12.2	0.998	1
B2M	Del_17p12	0.998	1
ACVR1B	20q-Amp	0.998	1
ACVR1B	8p-Del	0.998	1
CDH1	9p-Amp	0.998	1
CDH1	Del_17p12	0.998	1
MLH1	Del_18q22.1	0.998	1
BCOR	8q-Amp	0.998	1
SMAD2	Del_18p11.31	0.998	1
SMAD2	Del_18q21.2	0.998	1
WNT1	20q-Amp	0.998	1
WNT1	Amp_20q11.21	0.998	1
WNT1	Amp_20q12	0.998	1
STARD3NL	18q-Del	0.998	1
NF2	Amp_20q13.12	0.998	1
MAPK6	13q-Amp	0.998	1
RHOA	Del_8p22	0.998	1
FAM9A	18q-Del	0.998	1
EGR1	18p-Del	0.998	1
EGR1	Del_17p12	0.998	1
PRKDC	15q-Del	0.998	1
PRKDC	Amp_20p11.21	0.998	1
NF1	Amp_20q12	0.998	1
FBXW7	Amp_19q12	0.998	1
FBXW7	Del_17p12	0.998	1
FBXW7	Del_18q21.2	0.998	1
FBXW7	Del_18q22.1	0.998	1
CHUK	13q-Amp	0.998	1
CHUK	17p-Del	0.998	1
MGA	13q-Amp	0.998	1
MGA	15q-Del	0.998	1
MGA	Del_15q11.2	0.998	1
ZBTB20	7p-Amp	0.998	1
ZBTB20	Amp_13q22.1	0.998	1
ST3GAL6	18p-Del	0.998	1
ST3GAL6	Amp_13q12.2	0.998	1
ST3GAL6	Amp_13q22.1	0.998	1
ST3GAL6	Amp_20q13.12	0.998	1
PLEKHF2	18p-Del	0.998	1
PLEKHF2	Amp_13q22.1	0.998	1
ASXL1	Amp_13q12.13	0.998	1
NLRC4	Del_18p11.31	0.998	1
DIP2B	7p-Amp	0.998	1
DIP2B	Del_18q12.2	0.998	1
PRRG1	20p-Amp	0.998	1
ROS1	20p-Amp	0.998	1
ROS1	18p-Del	0.998	1
MPHOSPH10	Del_18q12.2	0.998	1
DDX26B	Amp_13q12.2	0.998	1
DDX26B	Amp_13q22.1	0.998	1
RBPJ	18p-Del	0.998	1
SLC26A8	20p-Amp	0.998	1
SLC26A8	Del_8p23.2	0.998	1
RBBP7	Del_17p12	0.998	1
RB1	18q-Del	0.998	1
RB1	Amp_5p12	0.998	1
L1TD1	Amp_13q12.13	0.998	1
L1TD1	Amp_13q22.1	0.998	1
L1TD1	Del_18q22.1	0.998	1
TOP2B	Amp_8q24.21	0.998	1
TOP2B	Del_8p23.2	0.998	1
DCLK2	18q-Del	0.998	1
FKBP9	13q-Amp	0.998	1
HLA-A	Amp_13q12.2	0.998	1
HLA-A	Del_18q22.1	0.998	1
BMPR2	Del_1p36.11	0.998	1
ALDH1A3	Amp_20q13.12	0.998	1
ALDH1A3	Del_8p23.2	0.998	1
BCORL1	18q-Del	0.998	1
MAP4K3	7p-Amp	0.998	1
MAP4K3	Amp_13q22.1	0.998	1
SETD2	18p-Del	0.998	1
SLC12A6	18q-Del	0.998	1
SLC12A6	Del_17p12	0.998	1
SLC12A6	Del_18p11.31	0.998	1
GMPS	18p-Del	0.998	1
GMPS	Amp_20q12	0.998	1
GMPS	Del_17p12	0.998	1
BIRC3	18q-Del	0.998	1
ATM	18p-Del	0.998	1
ATM	22q-Del	0.998	1
ATM	Del_18q22.1	0.998	1
ZNF486	Amp_20q11.21	0.998	1
ZNF486	Del_18p11.31	0.998	1
12p-Amp	15q-Del	0.998	1
12q-Amp	Del_15q11.2	0.998	1
7q-Amp	Del_10q21.1	0.998	1
14q-Del	Amp_12p13.33	0.998	1
Amp_12p13.33	Del_15q11.2	0.998	1
Amp_20q12	Del_16q23.1	0.998	1
ARID1A	Del_1p36.11	0.999	1
ARID1A	Del_18q21.2	0.999	1
ARID1A	Del_18q22.1	0.999	1
RNF43	7p-Amp	0.999	1
RNF43	7q-Amp	0.999	1
RNF43	Del_4q22.1	0.999	1
RNF43	Del_5q22.2	0.999	1
RNF43	Del_15q22.33	0.999	1
TP53	ACVR1B	0.999	1
FAM123B	20q-Amp	0.999	1
SOX9	Amp_20q12	0.999	1
B2M	Amp_13q12.13	0.999	1
B2M	Amp_13q22.1	0.999	1
ACVR1B	18p-Del	0.999	1
ACVR1B	Amp_20q11.21	0.999	1
ACVR1B	Amp_20q12	0.999	1
ACVR1B	Del_17p12	0.999	1
ACVR1B	Del_18p11.31	0.999	1
CDH1	20q-Amp	0.999	1
MLH1	18p-Del	0.999	1
BCOR	18p-Del	0.999	1
BCOR	Amp_13q12.13	0.999	1
SMAD2	18p-Del	0.999	1
WNT1	Amp_20q13.12	0.999	1
FMN2	7q-Amp	0.999	1
FMN2	Amp_20q11.21	0.999	1
FMN2	Amp_20q13.12	0.999	1
STARD3NL	Del_18p11.31	0.999	1
STARD3NL	Del_18q12.2	0.999	1
STARD3NL	Del_18q21.2	0.999	1
STARD3NL	Del_18q22.1	0.999	1
NF2	15q-Del	0.999	1
NF2	18p-Del	0.999	1
NF2	Del_18q21.2	0.999	1
MAPK6	18p-Del	0.999	1
MAPK6	Amp_13q12.2	0.999	1
MAPK6	Amp_13q22.1	0.999	1
FAM9A	Del_18q21.2	0.999	1
FAM9A	Del_18q22.1	0.999	1
EGR1	20q-Amp	0.999	1
PRKDC	13q-Amp	0.999	1
PRKDC	20q-Amp	0.999	1
PRKDC	18p-Del	0.999	1
PRKDC	Amp_13q12.13	0.999	1
PRKDC	Amp_20p12.1	0.999	1
PRKDC	Del_5q12.1	0.999	1
PRKDC	Del_15q11.2	0.999	1
PRKDC	Del_15q22.33	0.999	1
PRKDC	Del_17p12	0.999	1
PRKDC	Del_18p11.31	0.999	1
FBXW7	18p-Del	0.999	1
FBXW7	4q-Del	0.999	1
FBXW7	Amp_20q11.21	0.999	1
FBXW7	Del_14q11.2	0.999	1
FBXW7	Del_18p11.31	0.999	1
CHUK	Amp_13q12.2	0.999	1
CHUK	Amp_13q22.1	0.999	1
MGA	Amp_13q12.13	0.999	1
MGA	Amp_13q12.2	0.999	1
MGA	Del_15q22.33	0.999	1
ZBTB20	Amp_20p12.1	0.999	1
ERBB2	Amp_20p12.1	0.999	1
P2RY13	20q-Amp	0.999	1
ST3GAL6	18q-Del	0.999	1
ST3GAL6	Amp_13q12.13	0.999	1
ST3GAL6	Del_18q12.2	0.999	1
ALPK2	17p-Del	0.999	1
ALPK2	Amp_13q12.13	0.999	1
ALPK2	Amp_13q12.2	0.999	1
ALPK2	Amp_20p12.1	0.999	1
ALPK2	Amp_20p11.21	0.999	1
ASXL1	18q-Del	0.999	1
ASXL1	Del_18q12.2	0.999	1
PTCH1	20p-Amp	0.999	1
PTCH1	Amp_20p12.1	0.999	1
PTCH1	Amp_20p11.21	0.999	1
PTCH1	Amp_20q11.21	0.999	1
PTCH1	Amp_20q13.12	0.999	1
PTCH1	Del_17p12	0.999	1
PTCH1	Del_17q24.3	0.999	1
NLRC4	20q-Amp	0.999	1
C11orf30	7p-Amp	0.999	1
C11orf30	18p-Del	0.999	1
C11orf30	18q-Del	0.999	1
C11orf30	Del_18q12.2	0.999	1
PRRG1	20q-Amp	0.999	1
PRRG1	Amp_20q11.21	0.999	1
PRRG1	Amp_20q12	0.999	1
PCBP1	Amp_8q24.21	0.999	1
PCBP1	Del_8p23.2	0.999	1
PCBP1	Del_8p22	0.999	1
PIK3R1	Del_1p36.11	0.999	1
RSPH3	Amp_20q11.21	0.999	1
RSPH3	Amp_20q12	0.999	1
ROS1	20q-Amp	0.999	1
ROS1	14q-Del	0.999	1
ROS1	18q-Del	0.999	1
ROS1	Amp_13q22.1	0.999	1
ROS1	Del_17p12	0.999	1
ROS1	Del_18q12.2	0.999	1
ROS1	Del_18q22.1	0.999	1
DDX26B	Amp_8q24.21	0.999	1
DDX26B	Del_8p23.2	0.999	1
RBPJ	17p-Del	0.999	1
RBPJ	18q-Del	0.999	1
SLC26A8	17p-Del	0.999	1
SLC26A8	18p-Del	0.999	1
SLC26A8	Amp_20p11.21	0.999	1
SLC26A8	Del_8p22	0.999	1
SLC26A8	Del_18p11.31	0.999	1
RBBP7	Amp_20q11.21	0.999	1
RB1	20q-Amp	0.999	1
RB1	18p-Del	0.999	1
RB1	Amp_20q11.21	0.999	1
RB1	Amp_20q12	0.999	1
RB1	Del_18q12.2	0.999	1
RB1	Del_18q22.1	0.999	1
L1TD1	13q-Amp	0.999	1
L1TD1	18q-Del	0.999	1
L1TD1	Del_8p23.2	0.999	1
L1TD1	Del_8p22	0.999	1
L1TD1	Del_18q12.2	0.999	1
L1TD1	Del_18q21.2	0.999	1
TOP2B	18q-Del	0.999	1
TOP2B	Del_8p22	0.999	1
TOP2B	Del_18p11.31	0.999	1
TOP2B	Del_18q22.1	0.999	1
DCLK2	Del_18q12.2	0.999	1
DCLK2	Del_18q21.2	0.999	1
DCLK2	Del_18q22.1	0.999	1
FKBP9	18p-Del	0.999	1
FKBP9	Amp_13q22.1	0.999	1
FKBP9	Amp_20p11.21	0.999	1
FKBP9	Del_17p12	0.999	1
FKBP9	Del_18p11.31	0.999	1
PTEN	18q-Del	0.999	1
PTEN	Amp_17q12	0.999	1
PTEN	Del_18q12.2	0.999	1
HLA-A	18q-Del	0.999	1
HLA-A	Amp_13q12.13	0.999	1
HLA-A	Amp_13q22.1	0.999	1
HLA-A	Del_18q21.2	0.999	1
BMPR2	Del_8p23.2	0.999	1
BMPR2	Del_15q21.1	0.999	1
FYN	Del_8p23.2	0.999	1
FYN	Del_8p22	0.999	1
ALDH1A3	17p-Del	0.999	1
ALDH1A3	Amp_20q11.21	0.999	1
ALDH1A3	Del_8p22	0.999	1
ALDH1A3	Del_18q12.2	0.999	1
LARP4B	Amp_20p11.21	0.999	1
LARP4B	Del_8p22	0.999	1
BCORL1	Amp_13q22.1	0.999	1
BCORL1	Amp_20p11.21	0.999	1
BCORL1	Del_18q12.2	0.999	1
GPATCH8	13q-Amp	0.999	1
GPATCH8	20p-Amp	0.999	1
GPATCH8	20q-Amp	0.999	1
SETD2	15q-Del	0.999	1
SETD2	Amp_13q12.13	0.999	1
SETD2	Del_4q22.1	0.999	1
SETD2	Del_15q22.33	0.999	1
SETD2	Del_17p12	0.999	1
SETD2	Del_18p11.31	0.999	1
SETD2	Del_21q11.2	0.999	1
SETD2	Del_21q21.1	0.999	1
SLC12A6	18p-Del	0.999	1
SLC12A6	Amp_20p11.21	0.999	1
SLC12A6	Del_8p23.2	0.999	1
SLC12A6	Del_18q12.2	0.999	1
CDK12	13q-Amp	0.999	1
CDK12	20p-Amp	0.999	1
CDK12	20q-Amp	0.999	1
CDK12	Amp_20q11.21	0.999	1
CDK12	Amp_20q12	0.999	1
CDK12	Amp_20q13.12	0.999	1
CDK12	Del_18q21.2	0.999	1
NEXN	Del_18q21.2	0.999	1
GMPS	18q-Del	0.999	1
GMPS	Amp_20q13.12	0.999	1
BIRC3	Del_18q12.2	0.999	1
ATM	18q-Del	0.999	1
ATM	1p-Del	0.999	1
ATM	Amp_13q22.1	0.999	1
ATM	Del_8q11.1	0.999	1
ATM	Del_18q12.2	0.999	1
ATM	Del_18q21.2	0.999	1
CREBBP	7p-Amp	0.999	1
CREBBP	8p-Del	0.999	1
CREBBP	Amp_11p15.5	0.999	1
CREBBP	Amp_17q12	0.999	1
KDM6A	Amp_20p12.1	0.999	1
12p-Amp	Del_22q13.32	0.999	1
12q-Amp	Del_18p11.31	0.999	1
Amp_20p11.21	Del_6q26	0.999	1
Amp_20q13.12	Del_16q23.1	0.999	1
ARID1A	GGT1	1	1
ARID1A	PCBP1	1	1
ARID1A	16p-Amp	1	1
ARID1A	16q-Amp	1	1
ARID1A	20q-Amp	1	1
ARID1A	22q-Del	1	1
ARID1A	Amp_15q26.1	1	1
ARID1A	Amp_16p11.2	1	1
ARID1A	Amp_20q11.21	1	1
ARID1A	Amp_20q12	1	1
ARID1A	Amp_20q13.12	1	1
ARID1A	Del_2p12	1	1
ARID1A	Del_8q11.1	1	1
CRIPAK	B2M	1	1
CRIPAK	OR4D10	1	1
CRIPAK	THOC7	1	1
CRIPAK	MVK	1	1
CRIPAK	PLEKHF2	1	1
CRIPAK	NR1H3	1	1
CRIPAK	GRB2	1	1
CRIPAK	RSPH3	1	1
CRIPAK	RBPJ	1	1
CRIPAK	C14orf184	1	1
CRIPAK	FYN	1	1
CRIPAK	NEXN	1	1
CRIPAK	ZNF486	1	1
CRIPAK	GMNN	1	1
CRIPAK	16p-Amp	1	1
CRIPAK	16q-Amp	1	1
CRIPAK	17q-Amp	1	1
CRIPAK	2p-Amp	1	1
CRIPAK	2q-Amp	1	1
CRIPAK	6p-Amp	1	1
CRIPAK	1p-Del	1	1
CRIPAK	Amp_15q26.1	1	1
CRIPAK	Amp_17q12	1	1
CRIPAK	Amp_17q24.1	1	1
CRIPAK	Amp_19q12	1	1
CRIPAK	Del_2p12	1	1
CRIPAK	Del_2q22.1	1	1
CRIPAK	Del_7q31.1	1	1
CRIPAK	Del_8q11.1	1	1
RNF43	TP53	1	1
RNF43	GGT1	1	1
RNF43	13q-Amp	1	1
RNF43	16p-Amp	1	1
RNF43	16q-Amp	1	1
RNF43	17q-Amp	1	1
RNF43	20p-Amp	1	1
RNF43	20q-Amp	1	1
RNF43	2p-Amp	1	1
RNF43	2q-Amp	1	1
RNF43	6p-Amp	1	1
RNF43	14q-Del	1	1
RNF43	15q-Del	1	1
RNF43	17p-Del	1	1
RNF43	18p-Del	1	1
RNF43	18q-Del	1	1
RNF43	1p-Del	1	1
RNF43	20p-Del	1	1
RNF43	4p-Del	1	1
RNF43	4q-Del	1	1
RNF43	5q-Del	1	1
RNF43	8p-Del	1	1
RNF43	Amp_2q33.1	1	1
RNF43	Amp_6p21.1	1	1
RNF43	Amp_13q12.13	1	1
RNF43	Amp_13q12.2	1	1
RNF43	Amp_13q22.1	1	1
RNF43	Amp_15q26.1	1	1
RNF43	Amp_17q12	1	1
RNF43	Amp_17q24.1	1	1
RNF43	Amp_20p12.1	1	1
RNF43	Amp_20p11.21	1	1
RNF43	Amp_20q11.21	1	1
RNF43	Amp_20q12	1	1
RNF43	Amp_20q13.12	1	1
RNF43	Del_1p36.11	1	1
RNF43	Del_1p33	1	1
RNF43	Del_2p12	1	1
RNF43	Del_2q22.1	1	1
RNF43	Del_3p26.3	1	1
RNF43	Del_4q35.1	1	1
RNF43	Del_5q12.1	1	1
RNF43	Del_5q21.2	1	1
RNF43	Del_6q26	1	1
RNF43	Del_7q31.1	1	1
RNF43	Del_8p23.2	1	1
RNF43	Del_8p22	1	1
RNF43	Del_14q11.2	1	1
RNF43	Del_15q11.2	1	1
RNF43	Del_15q15.2	1	1
RNF43	Del_15q21.1	1	1
RNF43	Del_16p13.3	1	1
RNF43	Del_17p12	1	1
RNF43	Del_17q24.3	1	1
RNF43	Del_18p11.31	1	1
RNF43	Del_18q12.2	1	1
RNF43	Del_18q21.2	1	1
RNF43	Del_18q22.1	1	1
RNF43	Del_19p13.3	1	1
TP53	ZBTB20	1	1
TP53	12q-Amp	1	1
FAM123B	WNT1	1	1
FAM123B	ALG12	1	1
FAM123B	PRPS1	1	1
FAM123B	16q-Amp	1	1
FAM123B	17q-Amp	1	1
FAM123B	2p-Amp	1	1
FAM123B	2q-Amp	1	1
FAM123B	Amp_11p15.5	1	1
FAM123B	Amp_15q26.1	1	1
FAM123B	Amp_17q24.1	1	1
FAM123B	Amp_20q11.21	1	1
FAM123B	Amp_20q12	1	1
FAM123B	Amp_20q13.12	1	1
FAM123B	Del_2p12	1	1
SOX9	GRB2	1	1
SOX9	PRRG1	1	1
SOX9	IFT57	1	1
SOX9	VCX2	1	1
SOX9	C14orf184	1	1
SOX9	PTGDR	1	1
SOX9	GMNN	1	1
SOX9	6p-Amp	1	1
SOX9	9p-Amp	1	1
SOX9	1p-Del	1	1
SOX9	20p-Del	1	1
SOX9	22q-Del	1	1
SOX9	4p-Del	1	1
SOX9	5q-Del	1	1
SOX9	8p-Del	1	1
SOX9	Amp_5p12	1	1
SOX9	Amp_6p21.1	1	1
SOX9	Amp_10q22.3	1	1
SOX9	Amp_15q26.1	1	1
SOX9	Amp_19q12	1	1
SOX9	Amp_20q13.12	1	1
SOX9	Del_1p33	1	1
SOX9	Del_1p13.2	1	1
SOX9	Del_2p12	1	1
SOX9	Del_2q22.1	1	1
SOX9	Del_3q26.31	1	1
SOX9	Del_4p16.1	1	1
SOX9	Del_6q26	1	1
SOX9	Del_8p23.2	1	1
SOX9	Del_8p22	1	1
SOX9	Del_16p13.3	1	1
SOX9	Del_17q24.3	1	1
SOX9	Del_22q13.32	1	1
ZFP36L2	TXNDC2	1	1
ZFP36L2	SMAD2	1	1
ZFP36L2	GGT1	1	1
ZFP36L2	OR4D10	1	1
ZFP36L2	THOC7	1	1
ZFP36L2	PLEKHF2	1	1
ZFP36L2	C11orf30	1	1
ZFP36L2	PCBP1	1	1
ZFP36L2	RSPH3	1	1
ZFP36L2	RLIM	1	1
ZFP36L2	VCX2	1	1
ZFP36L2	RBPJ	1	1
ZFP36L2	HLA-A	1	1
ZFP36L2	PTGDR	1	1
ZFP36L2	BIRC3	1	1
ZFP36L2	HIST1H1T	1	1
ZFP36L2	GMNN	1	1
ZFP36L2	16p-Amp	1	1
ZFP36L2	16q-Amp	1	1
ZFP36L2	17q-Amp	1	1
ZFP36L2	2p-Amp	1	1
ZFP36L2	2q-Amp	1	1
ZFP36L2	6p-Amp	1	1
ZFP36L2	9p-Amp	1	1
ZFP36L2	1p-Del	1	1
ZFP36L2	5q-Del	1	1
ZFP36L2	Amp_6p21.1	1	1
ZFP36L2	Amp_15q26.1	1	1
ZFP36L2	Amp_16p11.2	1	1
ZFP36L2	Amp_17q12	1	1
ZFP36L2	Amp_17q24.1	1	1
ZFP36L2	Amp_19q12	1	1
ZFP36L2	Del_2p12	1	1
ZFP36L2	Del_3p26.3	1	1
ZFP36L2	Del_4p16.1	1	1
ZFP36L2	Del_7q31.1	1	1
ZFP36L2	Del_12p13.1	1	1
ZFP36L2	Del_16p13.3	1	1
B2M	WNT1	1	1
B2M	GGT1	1	1
B2M	SELPLG	1	1
B2M	THOC7	1	1
B2M	ATXN3L	1	1
B2M	IQCD	1	1
B2M	PLEKHF2	1	1
B2M	ALG12	1	1
B2M	GRB2	1	1
B2M	PLAGL2	1	1
B2M	IFT57	1	1
B2M	RLIM	1	1
B2M	VCX2	1	1
B2M	C14orf184	1	1
B2M	PRPS1	1	1
B2M	IDH1	1	1
B2M	13q-Amp	1	1
B2M	16p-Amp	1	1
B2M	16q-Amp	1	1
B2M	17q-Amp	1	1
B2M	20p-Amp	1	1
B2M	20q-Amp	1	1
B2M	2p-Amp	1	1
B2M	2q-Amp	1	1
B2M	6p-Amp	1	1
B2M	7q-Amp	1	1
B2M	9p-Amp	1	1
B2M	15q-Del	1	1
B2M	18q-Del	1	1
B2M	1p-Del	1	1
B2M	20p-Del	1	1
B2M	22q-Del	1	1
B2M	4p-Del	1	1
B2M	4q-Del	1	1
B2M	5q-Del	1	1
B2M	8p-Del	1	1
B2M	Amp_1q31.1	1	1
B2M	Amp_5p12	1	1
B2M	Amp_6p21.1	1	1
B2M	Amp_10q22.3	1	1
B2M	Amp_11p15.5	1	1
B2M	Amp_15q26.1	1	1
B2M	Amp_16p11.2	1	1
B2M	Amp_17q12	1	1
B2M	Amp_19q12	1	1
B2M	Amp_20p11.21	1	1
B2M	Amp_20q11.21	1	1
B2M	Amp_20q12	1	1
B2M	Amp_20q13.12	1	1
B2M	Del_1p36.11	1	1
B2M	Del_1p13.2	1	1
B2M	Del_2p12	1	1
B2M	Del_2q22.1	1	1
B2M	Del_3q26.31	1	1
B2M	Del_4p16.1	1	1
B2M	Del_4q35.1	1	1
B2M	Del_5q12.1	1	1
B2M	Del_5q21.2	1	1
B2M	Del_5q22.2	1	1
B2M	Del_5q23.3	1	1
B2M	Del_6p25.3	1	1
B2M	Del_6q26	1	1
B2M	Del_7q31.1	1	1
B2M	Del_8q11.1	1	1
B2M	Del_10q23.31	1	1
B2M	Del_12p13.1	1	1
B2M	Del_15q22.33	1	1
B2M	Del_16p13.3	1	1
B2M	Del_16q23.1	1	1
B2M	Del_17q24.3	1	1
B2M	Del_18q12.2	1	1
B2M	Del_18q21.2	1	1
B2M	Del_18q22.1	1	1
B2M	Del_19p13.3	1	1
B2M	Del_22q13.32	1	1
TXNDC2	WNT1	1	1
TXNDC2	RHOA	1	1
TXNDC2	PCBP1	1	1
TXNDC2	IFT57	1	1
TXNDC2	RSPH3	1	1
TXNDC2	VCX2	1	1
TXNDC2	FYN	1	1
TXNDC2	SLC12A6	1	1
TXNDC2	BIRC3	1	1
TXNDC2	ZNF486	1	1
TXNDC2	12q-Amp	1	1
TXNDC2	17q-Amp	1	1
TXNDC2	2p-Amp	1	1
TXNDC2	2q-Amp	1	1
TXNDC2	6p-Amp	1	1
TXNDC2	1p-Del	1	1
TXNDC2	5q-Del	1	1
TXNDC2	Amp_2q33.1	1	1
TXNDC2	Amp_5p12	1	1
TXNDC2	Amp_6p21.1	1	1
TXNDC2	Amp_10q22.3	1	1
TXNDC2	Amp_17q24.1	1	1
TXNDC2	Del_2p12	1	1
TXNDC2	Del_2q22.1	1	1
TXNDC2	Del_3q26.31	1	1
TXNDC2	Del_5q12.1	1	1
TXNDC2	Del_5q21.2	1	1
TXNDC2	Del_6p25.3	1	1
TXNDC2	Del_6q26	1	1
TXNDC2	Del_8q11.1	1	1
TXNDC2	Del_10q21.1	1	1
TXNDC2	Del_10q23.31	1	1
TXNDC2	Del_17q24.3	1	1
TXNDC2	Del_19p13.3	1	1
ACVR1B	GGT1	1	1
ACVR1B	THOC7	1	1
ACVR1B	ZBTB20	1	1
ACVR1B	IQCD	1	1
ACVR1B	GRB2	1	1
ACVR1B	RLIM	1	1
ACVR1B	VCX2	1	1
ACVR1B	C14orf184	1	1
ACVR1B	ALDH1A3	1	1
ACVR1B	PRPS1	1	1
ACVR1B	PTGDR	1	1
ACVR1B	HIST1H1T	1	1
ACVR1B	ZNF486	1	1
ACVR1B	16p-Amp	1	1
ACVR1B	16q-Amp	1	1
ACVR1B	6p-Amp	1	1
ACVR1B	15q-Del	1	1
ACVR1B	17p-Del	1	1
ACVR1B	18q-Del	1	1
ACVR1B	1p-Del	1	1
ACVR1B	4p-Del	1	1
ACVR1B	4q-Del	1	1
ACVR1B	5q-Del	1	1
ACVR1B	Amp_6p21.1	1	1
ACVR1B	Amp_15q26.1	1	1
ACVR1B	Amp_16p11.2	1	1
ACVR1B	Amp_20q13.12	1	1
ACVR1B	Del_1p13.2	1	1
ACVR1B	Del_2p12	1	1
ACVR1B	Del_2q22.1	1	1
ACVR1B	Del_3p26.3	1	1
ACVR1B	Del_4p16.1	1	1
ACVR1B	Del_5q23.3	1	1
ACVR1B	Del_6q26	1	1
ACVR1B	Del_8q11.1	1	1
ACVR1B	Del_15q22.33	1	1
ACVR1B	Del_16p13.3	1	1
ACVR1B	Del_18q12.2	1	1
ACVR1B	Del_18q21.2	1	1
ACVR1B	Del_18q22.1	1	1
ACVR1B	Del_19p13.3	1	1
CDH1	THOC7	1	1
CDH1	GMNN	1	1
CDH1	18p-Del	1	1
CDH1	18q-Del	1	1
CDH1	Del_2p12	1	1
CDH1	Del_18p11.31	1	1
CDH1	Del_18q12.2	1	1
CDH1	Del_18q21.2	1	1
CDH1	Del_18q22.1	1	1
MLH1	GMNN	1	1
MLH1	9p-Amp	1	1
MLH1	18q-Del	1	1
MLH1	5q-Del	1	1
MLH1	Amp_15q26.1	1	1
MLH1	Del_2p12	1	1
MLH1	Del_2q22.1	1	1
MLH1	Del_6p25.3	1	1
MLH1	Del_6q26	1	1
MLH1	Del_7q31.1	1	1
MLH1	Del_18q12.2	1	1
MLH1	Del_18q21.2	1	1
MLH1	Del_19p13.3	1	1
BCOR	GGT1	1	1
BCOR	PCBP1	1	1
BCOR	VCX2	1	1
BCOR	C14orf184	1	1
BCOR	13q-Amp	1	1
BCOR	20p-Amp	1	1
BCOR	20q-Amp	1	1
BCOR	2p-Amp	1	1
BCOR	2q-Amp	1	1
BCOR	6p-Amp	1	1
BCOR	18q-Del	1	1
BCOR	1p-Del	1	1
BCOR	5q-Del	1	1
BCOR	Amp_2q33.1	1	1
BCOR	Amp_6p21.1	1	1
BCOR	Amp_13q12.2	1	1
BCOR	Amp_13q22.1	1	1
BCOR	Amp_15q26.1	1	1
BCOR	Amp_17q12	1	1
BCOR	Amp_17q24.1	1	1
BCOR	Amp_19q12	1	1
BCOR	Amp_20p11.21	1	1
BCOR	Amp_20q11.21	1	1
BCOR	Amp_20q12	1	1
BCOR	Amp_20q13.12	1	1
BCOR	Del_1p36.11	1	1
BCOR	Del_2p12	1	1
BCOR	Del_5q22.2	1	1
BCOR	Del_5q23.3	1	1
BCOR	Del_7q31.1	1	1
BCOR	Del_10q21.1	1	1
BCOR	Del_10q23.31	1	1
BCOR	Del_12p13.1	1	1
BCOR	Del_17q24.3	1	1
BCOR	Del_18p11.31	1	1
BCOR	Del_18q12.2	1	1
BCOR	Del_18q21.2	1	1
BCOR	Del_18q22.1	1	1
SMAD2	WNT1	1	1
SMAD2	GGT1	1	1
SMAD2	RHOA	1	1
SMAD2	THOC7	1	1
SMAD2	TPRKB	1	1
SMAD2	MVK	1	1
SMAD2	ALG12	1	1
SMAD2	PLAGL2	1	1
SMAD2	RSPH3	1	1
SMAD2	VCX2	1	1
SMAD2	PRPS1	1	1
SMAD2	GMNN	1	1
SMAD2	2p-Amp	1	1
SMAD2	15q-Del	1	1
SMAD2	1p-Del	1	1
SMAD2	20p-Del	1	1
SMAD2	5q-Del	1	1
SMAD2	Amp_6p21.1	1	1
SMAD2	Amp_10q22.3	1	1
SMAD2	Amp_15q26.1	1	1
SMAD2	Del_1p36.11	1	1
SMAD2	Del_2p12	1	1
SMAD2	Del_2q22.1	1	1
SMAD2	Del_3p26.3	1	1
SMAD2	Del_3q26.31	1	1
SMAD2	Del_5q21.2	1	1
SMAD2	Del_5q22.2	1	1
SMAD2	Del_5q23.3	1	1
SMAD2	Del_6q26	1	1
SMAD2	Del_7q31.1	1	1
SMAD2	Del_8q11.1	1	1
SMAD2	Del_10q21.1	1	1
SMAD2	Del_10q23.31	1	1
SMAD2	Del_12p13.1	1	1
SMAD2	Del_16p13.3	1	1
WNT1	GGT1	1	1
WNT1	STARD3NL	1	1
WNT1	SELPLG	1	1
WNT1	OR4D10	1	1
WNT1	RPTN	1	1
WNT1	THOC7	1	1
WNT1	ATXN3L	1	1
WNT1	TPRKB	1	1
WNT1	ERBB2	1	1
WNT1	IQCD	1	1
WNT1	PLEKHF2	1	1
WNT1	ASXL1	1	1
WNT1	GRB2	1	1
WNT1	DIP2B	1	1
WNT1	PCBP1	1	1
WNT1	RSPH3	1	1
WNT1	C2orf29	1	1
WNT1	L1TD1	1	1
WNT1	DCLK2	1	1
WNT1	C14orf184	1	1
WNT1	FYN	1	1
WNT1	NEXN	1	1
WNT1	GMPS	1	1
WNT1	PTGDR	1	1
WNT1	BIRC3	1	1
WNT1	HIST1H1T	1	1
WNT1	ZNF486	1	1
WNT1	GMNN	1	1
WNT1	13q-Amp	1	1
WNT1	16p-Amp	1	1
WNT1	16q-Amp	1	1
WNT1	17q-Amp	1	1
WNT1	2p-Amp	1	1
WNT1	2q-Amp	1	1
WNT1	6p-Amp	1	1
WNT1	14q-Del	1	1
WNT1	15q-Del	1	1
WNT1	17p-Del	1	1
WNT1	18p-Del	1	1
WNT1	18q-Del	1	1
WNT1	1p-Del	1	1
WNT1	20p-Del	1	1
WNT1	22q-Del	1	1
WNT1	4p-Del	1	1
WNT1	4q-Del	1	1
WNT1	5q-Del	1	1
WNT1	8p-Del	1	1
WNT1	Amp_1q31.1	1	1
WNT1	Amp_2q33.1	1	1
WNT1	Amp_6p21.1	1	1
WNT1	Amp_10q22.3	1	1
WNT1	Amp_11p15.5	1	1
WNT1	Amp_13q12.13	1	1
WNT1	Amp_13q12.2	1	1
WNT1	Amp_13q22.1	1	1
WNT1	Amp_15q26.1	1	1
WNT1	Amp_16p11.2	1	1
WNT1	Amp_17q12	1	1
WNT1	Amp_17q24.1	1	1
WNT1	Amp_19q12	1	1
WNT1	Del_1p36.11	1	1
WNT1	Del_1p33	1	1
WNT1	Del_1p13.2	1	1
WNT1	Del_2p12	1	1
WNT1	Del_2q22.1	1	1
WNT1	Del_3p26.3	1	1
WNT1	Del_3p14.2	1	1
WNT1	Del_3q26.31	1	1
WNT1	Del_4p16.1	1	1
WNT1	Del_4q22.1	1	1
WNT1	Del_4q35.1	1	1
WNT1	Del_5q12.1	1	1
WNT1	Del_5q21.2	1	1
WNT1	Del_5q22.2	1	1
WNT1	Del_5q23.3	1	1
WNT1	Del_6p25.3	1	1
WNT1	Del_6q26	1	1
WNT1	Del_7q31.1	1	1
WNT1	Del_8q11.1	1	1
WNT1	Del_10q21.1	1	1
WNT1	Del_10q23.31	1	1
WNT1	Del_10q25.2	1	1
WNT1	Del_14q11.2	1	1
WNT1	Del_15q22.33	1	1
WNT1	Del_16p13.3	1	1
WNT1	Del_17p12	1	1
WNT1	Del_17q24.3	1	1
WNT1	Del_18p11.31	1	1
WNT1	Del_18q12.2	1	1
WNT1	Del_18q21.2	1	1
WNT1	Del_18q22.1	1	1
WNT1	Del_19p13.3	1	1
WNT1	Del_22q13.32	1	1
FMN2	RHOA	1	1
FMN2	PTGDR	1	1
FMN2	20q-Amp	1	1
FMN2	6p-Amp	1	1
FMN2	1p-Del	1	1
FMN2	Amp_15q26.1	1	1
FMN2	Amp_19q12	1	1
FMN2	Amp_20q12	1	1
FMN2	Del_2p12	1	1
FMN2	Del_2q22.1	1	1
FMN2	Del_7q31.1	1	1
FMN2	Del_10q25.2	1	1
GGT1	STARD3NL	1	1
GGT1	OR4D10	1	1
GGT1	MAPK6	1	1
GGT1	RHOA	1	1
GGT1	FAM9A	1	1
GGT1	EGR1	1	1
GGT1	RPTN	1	1
GGT1	CHUK	1	1
GGT1	MVK	1	1
GGT1	BCL9	1	1
GGT1	ERBB2	1	1
GGT1	P2RY13	1	1
GGT1	ST3GAL6	1	1
GGT1	IQCD	1	1
GGT1	PLEKHF2	1	1
GGT1	NR1H3	1	1
GGT1	ALG12	1	1
GGT1	NLRC4	1	1
GGT1	PLAGL2	1	1
GGT1	C11orf30	1	1
GGT1	DIP2B	1	1
GGT1	PRRG1	1	1
GGT1	PCBP1	1	1
GGT1	IFT57	1	1
GGT1	RSPH3	1	1
GGT1	RLIM	1	1
GGT1	MPHOSPH10	1	1
GGT1	C2orf29	1	1
GGT1	DDX26B	1	1
GGT1	RBBP7	1	1
GGT1	L1TD1	1	1
GGT1	TOP2B	1	1
GGT1	FKBP9	1	1
GGT1	C14orf184	1	1
GGT1	HLA-A	1	1
GGT1	BMPR2	1	1
GGT1	FYN	1	1
GGT1	ALDH1A3	1	1
GGT1	LARP4B	1	1
GGT1	GPATCH8	1	1
GGT1	MAP4K3	1	1
GGT1	SETD2	1	1
GGT1	SLC12A6	1	1
GGT1	NEXN	1	1
GGT1	GMPS	1	1
GGT1	PRPS1	1	1
GGT1	BIRC3	1	1
GGT1	HIST1H1T	1	1
GGT1	ZNF486	1	1
GGT1	CREBBP	1	1
GGT1	KDM6A	1	1
GGT1	6p-Amp	1	1
GGT1	9p-Amp	1	1
GGT1	Amp_1q31.1	1	1
GGT1	Amp_5p12	1	1
GGT1	Amp_6p21.1	1	1
GGT1	Amp_10q22.3	1	1
GGT1	Amp_11p15.5	1	1
GGT1	Del_2p12	1	1
GGT1	Del_2q22.1	1	1
GGT1	Del_3q26.31	1	1
GGT1	Del_6p25.3	1	1
GGT1	Del_6q26	1	1
GGT1	Del_8q11.1	1	1
GGT1	Del_10q21.1	1	1
GGT1	Del_12p13.1	1	1
GGT1	Del_16q23.1	1	1
GGT1	Del_17q24.3	1	1
GGT1	Del_19p13.3	1	1
STARD3NL	OR4D10	1	1
STARD3NL	THOC7	1	1
STARD3NL	TPRKB	1	1
STARD3NL	ALG12	1	1
STARD3NL	PRRG1	1	1
STARD3NL	VCX2	1	1
STARD3NL	C14orf184	1	1
STARD3NL	ALDH1A3	1	1
STARD3NL	IDH1	1	1
STARD3NL	12p-Amp	1	1
STARD3NL	12q-Amp	1	1
STARD3NL	16p-Amp	1	1
STARD3NL	16q-Amp	1	1
STARD3NL	17q-Amp	1	1
STARD3NL	2p-Amp	1	1
STARD3NL	2q-Amp	1	1
STARD3NL	6p-Amp	1	1
STARD3NL	9p-Amp	1	1
STARD3NL	15q-Del	1	1
STARD3NL	20p-Del	1	1
STARD3NL	21q-Del	1	1
STARD3NL	5q-Del	1	1
STARD3NL	Amp_2q33.1	1	1
STARD3NL	Amp_5p12	1	1
STARD3NL	Amp_12p13.33	1	1
STARD3NL	Amp_15q26.1	1	1
STARD3NL	Amp_17q12	1	1
STARD3NL	Amp_17q24.1	1	1
STARD3NL	Amp_19q12	1	1
STARD3NL	Del_2p12	1	1
STARD3NL	Del_2q22.1	1	1
STARD3NL	Del_5q12.1	1	1
STARD3NL	Del_5q23.3	1	1
STARD3NL	Del_6q26	1	1
STARD3NL	Del_12p13.1	1	1
STARD3NL	Del_15q11.2	1	1
STARD3NL	Del_15q15.2	1	1
STARD3NL	Del_15q21.1	1	1
STARD3NL	Del_15q22.33	1	1
STARD3NL	Del_16p13.3	1	1
STARD3NL	Del_16q23.1	1	1
STARD3NL	Del_21q11.2	1	1
STARD3NL	Del_21q21.1	1	1
SELPLG	FAM9A	1	1
SELPLG	EGR1	1	1
SELPLG	MVK	1	1
SELPLG	P2RY13	1	1
SELPLG	ALG12	1	1
SELPLG	PLAGL2	1	1
SELPLG	RSPH3	1	1
SELPLG	VCX2	1	1
SELPLG	IDH1	1	1
SELPLG	16p-Amp	1	1
SELPLG	6p-Amp	1	1
SELPLG	1p-Del	1	1
SELPLG	Amp_5p12	1	1
SELPLG	Amp_6p21.1	1	1
SELPLG	Amp_16p11.2	1	1
SELPLG	Del_2p12	1	1
SELPLG	Del_2q22.1	1	1
SELPLG	Del_3p26.3	1	1
SELPLG	Del_6q26	1	1
SELPLG	Del_7q31.1	1	1
SELPLG	Del_8q11.1	1	1
SELPLG	Del_17q24.3	1	1
SELPLG	Del_19p13.3	1	1
OR4D10	RHOA	1	1
OR4D10	EGR1	1	1
OR4D10	ALG12	1	1
OR4D10	PLAGL2	1	1
OR4D10	C14orf184	1	1
OR4D10	BCORL1	1	1
OR4D10	HIST1H1T	1	1
OR4D10	IDH1	1	1
OR4D10	GMNN	1	1
OR4D10	17q-Amp	1	1
OR4D10	2p-Amp	1	1
OR4D10	2q-Amp	1	1
OR4D10	6p-Amp	1	1
OR4D10	8p-Amp	1	1
OR4D10	9p-Amp	1	1
OR4D10	1p-Del	1	1
OR4D10	20p-Del	1	1
OR4D10	21q-Del	1	1
OR4D10	4q-Del	1	1
OR4D10	5q-Del	1	1
OR4D10	Amp_1q31.1	1	1
OR4D10	Amp_2q33.1	1	1
OR4D10	Amp_5p12	1	1
OR4D10	Amp_6p21.1	1	1
OR4D10	Amp_10q22.3	1	1
OR4D10	Amp_11p15.5	1	1
OR4D10	Amp_15q26.1	1	1
OR4D10	Amp_17q12	1	1
OR4D10	Amp_17q24.1	1	1
OR4D10	Del_1p33	1	1
OR4D10	Del_1p13.2	1	1
OR4D10	Del_2p12	1	1
OR4D10	Del_2q22.1	1	1
OR4D10	Del_3p26.3	1	1
OR4D10	Del_4q22.1	1	1
OR4D10	Del_4q35.1	1	1
OR4D10	Del_5q12.1	1	1
OR4D10	Del_5q21.2	1	1
OR4D10	Del_5q22.2	1	1
OR4D10	Del_5q23.3	1	1
OR4D10	Del_6p25.3	1	1
OR4D10	Del_6q26	1	1
OR4D10	Del_7q31.1	1	1
OR4D10	Del_8q11.1	1	1
OR4D10	Del_10q21.1	1	1
OR4D10	Del_10q23.31	1	1
OR4D10	Del_10q25.2	1	1
OR4D10	Del_12p13.1	1	1
OR4D10	Del_17q24.3	1	1
OR4D10	Del_21q11.2	1	1
OR4D10	Del_21q21.1	1	1
NF2	2p-Amp	1	1
NF2	2q-Amp	1	1
NF2	18q-Del	1	1
NF2	Amp_2q33.1	1	1
NF2	Amp_19q12	1	1
NF2	Del_2p12	1	1
NF2	Del_15q22.33	1	1
NF2	Del_18q12.2	1	1
NF2	Del_18q22.1	1	1
MAPK6	THOC7	1	1
MAPK6	VCX2	1	1
MAPK6	C14orf184	1	1
MAPK6	GMNN	1	1
MAPK6	16p-Amp	1	1
MAPK6	16q-Amp	1	1
MAPK6	17q-Amp	1	1
MAPK6	2p-Amp	1	1
MAPK6	2q-Amp	1	1
MAPK6	14q-Del	1	1
MAPK6	15q-Del	1	1
MAPK6	17p-Del	1	1
MAPK6	18q-Del	1	1
MAPK6	1p-Del	1	1
MAPK6	20p-Del	1	1
MAPK6	22q-Del	1	1
MAPK6	4p-Del	1	1
MAPK6	4q-Del	1	1
MAPK6	5q-Del	1	1
MAPK6	Amp_1q31.1	1	1
MAPK6	Amp_2q33.1	1	1
MAPK6	Amp_10q22.3	1	1
MAPK6	Amp_11p15.5	1	1
MAPK6	Amp_13q12.13	1	1
MAPK6	Amp_15q26.1	1	1
MAPK6	Amp_17q12	1	1
MAPK6	Amp_17q24.1	1	1
MAPK6	Amp_19q12	1	1
MAPK6	Del_1p33	1	1
MAPK6	Del_1p13.2	1	1
MAPK6	Del_2p12	1	1
MAPK6	Del_2q22.1	1	1
MAPK6	Del_3p26.3	1	1
MAPK6	Del_3q26.31	1	1
MAPK6	Del_4q35.1	1	1
MAPK6	Del_6p25.3	1	1
MAPK6	Del_6q26	1	1
MAPK6	Del_7q31.1	1	1
MAPK6	Del_8q11.1	1	1
MAPK6	Del_10q21.1	1	1
MAPK6	Del_10q23.31	1	1
MAPK6	Del_10q25.2	1	1
MAPK6	Del_12p13.1	1	1
MAPK6	Del_14q11.2	1	1
MAPK6	Del_15q11.2	1	1
MAPK6	Del_15q15.2	1	1
MAPK6	Del_15q21.1	1	1
MAPK6	Del_15q22.33	1	1
MAPK6	Del_17p12	1	1
MAPK6	Del_18q12.2	1	1
MAPK6	Del_18q21.2	1	1
MAPK6	Del_18q22.1	1	1
MAPK6	Del_19p13.3	1	1
MAPK6	Del_22q13.32	1	1
RHOA	RPTN	1	1
RHOA	THOC7	1	1
RHOA	TPRKB	1	1
RHOA	MVK	1	1
RHOA	ERBB2	1	1
RHOA	IQCD	1	1
RHOA	PLEKHF2	1	1
RHOA	GRB2	1	1
RHOA	DIP2B	1	1
RHOA	IFT57	1	1
RHOA	RLIM	1	1
RHOA	VCX2	1	1
RHOA	C2orf29	1	1
RHOA	SLC26A8	1	1
RHOA	RBBP7	1	1
RHOA	L1TD1	1	1
RHOA	DCLK2	1	1
RHOA	C14orf184	1	1
RHOA	HLA-A	1	1
RHOA	NEXN	1	1
RHOA	GMPS	1	1
RHOA	PTGDR	1	1
RHOA	BIRC3	1	1
RHOA	HIST1H1T	1	1
RHOA	GMNN	1	1
RHOA	KDM6A	1	1
RHOA	16p-Amp	1	1
RHOA	16q-Amp	1	1
RHOA	17q-Amp	1	1
RHOA	2p-Amp	1	1
RHOA	2q-Amp	1	1
RHOA	6p-Amp	1	1
RHOA	9p-Amp	1	1
RHOA	1p-Del	1	1
RHOA	20p-Del	1	1
RHOA	21q-Del	1	1
RHOA	4p-Del	1	1
RHOA	4q-Del	1	1
RHOA	5q-Del	1	1
RHOA	Amp_2q33.1	1	1
RHOA	Amp_6p21.1	1	1
RHOA	Amp_15q26.1	1	1
RHOA	Amp_16p11.2	1	1
RHOA	Amp_17q12	1	1
RHOA	Amp_17q24.1	1	1
RHOA	Amp_19q12	1	1
RHOA	Del_1p13.2	1	1
RHOA	Del_2p12	1	1
RHOA	Del_2q22.1	1	1
RHOA	Del_3p14.2	1	1
RHOA	Del_3q26.31	1	1
RHOA	Del_4p16.1	1	1
RHOA	Del_4q22.1	1	1
RHOA	Del_5q12.1	1	1
RHOA	Del_5q21.2	1	1
RHOA	Del_5q22.2	1	1
RHOA	Del_5q23.3	1	1
RHOA	Del_6q26	1	1
RHOA	Del_8q11.1	1	1
RHOA	Del_12p13.1	1	1
RHOA	Del_16p13.3	1	1
RHOA	Del_17q24.3	1	1
RHOA	Del_19p13.3	1	1
RHOA	Del_21q11.2	1	1
RHOA	Del_21q21.1	1	1
FAM9A	THOC7	1	1
FAM9A	ATXN3L	1	1
FAM9A	IQCD	1	1
FAM9A	PLEKHF2	1	1
FAM9A	PCBP1	1	1
FAM9A	VCX2	1	1
FAM9A	C2orf29	1	1
FAM9A	RBPJ	1	1
FAM9A	RBBP7	1	1
FAM9A	C14orf184	1	1
FAM9A	PTGDR	1	1
FAM9A	BIRC3	1	1
FAM9A	HIST1H1T	1	1
FAM9A	GMNN	1	1
FAM9A	16p-Amp	1	1
FAM9A	16q-Amp	1	1
FAM9A	17q-Amp	1	1
FAM9A	2p-Amp	1	1
FAM9A	2q-Amp	1	1
FAM9A	6p-Amp	1	1
FAM9A	15q-Del	1	1
FAM9A	1p-Del	1	1
FAM9A	20p-Del	1	1
FAM9A	21q-Del	1	1
FAM9A	22q-Del	1	1
FAM9A	4p-Del	1	1
FAM9A	4q-Del	1	1
FAM9A	5q-Del	1	1
FAM9A	8p-Del	1	1
FAM9A	Amp_1q31.1	1	1
FAM9A	Amp_6p21.1	1	1
FAM9A	Amp_10q22.3	1	1
FAM9A	Amp_15q26.1	1	1
FAM9A	Amp_16p11.2	1	1
FAM9A	Amp_17q12	1	1
FAM9A	Amp_17q24.1	1	1
FAM9A	Amp_19q12	1	1
FAM9A	Del_1p36.11	1	1
FAM9A	Del_1p33	1	1
FAM9A	Del_1p13.2	1	1
FAM9A	Del_2p12	1	1
FAM9A	Del_2q22.1	1	1
FAM9A	Del_3p26.3	1	1
FAM9A	Del_3q26.31	1	1
FAM9A	Del_4p16.1	1	1
FAM9A	Del_4q22.1	1	1
FAM9A	Del_4q35.1	1	1
FAM9A	Del_5q12.1	1	1
FAM9A	Del_5q21.2	1	1
FAM9A	Del_6p25.3	1	1
FAM9A	Del_6q26	1	1
FAM9A	Del_8q11.1	1	1
FAM9A	Del_10q23.31	1	1
FAM9A	Del_10q25.2	1	1
FAM9A	Del_12p13.1	1	1
FAM9A	Del_15q22.33	1	1
FAM9A	Del_16p13.3	1	1
FAM9A	Del_17q24.3	1	1
FAM9A	Del_19p13.3	1	1
FAM9A	Del_21q11.2	1	1
FAM9A	Del_21q21.1	1	1
FAM9A	Del_22q13.32	1	1
EGR1	THOC7	1	1
EGR1	ATXN3L	1	1
EGR1	TPRKB	1	1
EGR1	IQCD	1	1
EGR1	GRB2	1	1
EGR1	RSPH3	1	1
EGR1	RLIM	1	1
EGR1	VCX2	1	1
EGR1	C2orf29	1	1
EGR1	RBPJ	1	1
EGR1	RBBP7	1	1
EGR1	C14orf184	1	1
EGR1	NEXN	1	1
EGR1	PTGDR	1	1
EGR1	GMNN	1	1
EGR1	KDM6A	1	1
EGR1	16p-Amp	1	1
EGR1	16q-Amp	1	1
EGR1	17q-Amp	1	1
EGR1	2p-Amp	1	1
EGR1	2q-Amp	1	1
EGR1	6p-Amp	1	1
EGR1	9p-Amp	1	1
EGR1	14q-Del	1	1
EGR1	15q-Del	1	1
EGR1	1p-Del	1	1
EGR1	20p-Del	1	1
EGR1	22q-Del	1	1
EGR1	4p-Del	1	1
EGR1	4q-Del	1	1
EGR1	5q-Del	1	1
EGR1	Amp_1q31.1	1	1
EGR1	Amp_2q33.1	1	1
EGR1	Amp_6p21.1	1	1
EGR1	Amp_10q22.3	1	1
EGR1	Amp_11p15.5	1	1
EGR1	Amp_15q26.1	1	1
EGR1	Amp_16p11.2	1	1
EGR1	Amp_17q24.1	1	1
EGR1	Amp_19q12	1	1
EGR1	Amp_20q11.21	1	1
EGR1	Amp_20q12	1	1
EGR1	Amp_20q13.12	1	1
EGR1	Del_1p33	1	1
EGR1	Del_1p13.2	1	1
EGR1	Del_2p12	1	1
EGR1	Del_2q22.1	1	1
EGR1	Del_3q26.31	1	1
EGR1	Del_4p16.1	1	1
EGR1	Del_4q22.1	1	1
EGR1	Del_4q35.1	1	1
EGR1	Del_5q22.2	1	1
EGR1	Del_5q23.3	1	1
EGR1	Del_6q26	1	1
EGR1	Del_7q31.1	1	1
EGR1	Del_8q11.1	1	1
EGR1	Del_10q25.2	1	1
EGR1	Del_12p13.1	1	1
EGR1	Del_14q11.2	1	1
EGR1	Del_15q22.33	1	1
EGR1	Del_16p13.3	1	1
EGR1	Del_17q24.3	1	1
EGR1	Del_19p13.3	1	1
EGR1	Del_22q13.32	1	1
PRKDC	THOC7	1	1
PRKDC	ALG12	1	1
PRKDC	20p-Amp	1	1
PRKDC	18q-Del	1	1
PRKDC	5q-Del	1	1
PRKDC	Amp_13q12.2	1	1
PRKDC	Amp_13q22.1	1	1
PRKDC	Amp_15q26.1	1	1
PRKDC	Amp_20q11.21	1	1
PRKDC	Amp_20q12	1	1
PRKDC	Amp_20q13.12	1	1
PRKDC	Del_2p12	1	1
PRKDC	Del_18q12.2	1	1
PRKDC	Del_18q21.2	1	1
PRKDC	Del_18q22.1	1	1
RPTN	CHUK	1	1
RPTN	GRB2	1	1
RPTN	PCBP1	1	1
RPTN	RLIM	1	1
RPTN	C14orf184	1	1
RPTN	ALDH1A3	1	1
RPTN	PTGDR	1	1
RPTN	ZNF486	1	1
RPTN	GMNN	1	1
RPTN	16p-Amp	1	1
RPTN	16q-Amp	1	1
RPTN	17q-Amp	1	1
RPTN	2p-Amp	1	1
RPTN	2q-Amp	1	1
RPTN	6p-Amp	1	1
RPTN	1p-Del	1	1
RPTN	20p-Del	1	1
RPTN	21q-Del	1	1
RPTN	Amp_1q31.1	1	1
RPTN	Amp_2q33.1	1	1
RPTN	Amp_5p12	1	1
RPTN	Amp_6p21.1	1	1
RPTN	Amp_10q22.3	1	1
RPTN	Amp_15q26.1	1	1
RPTN	Amp_17q12	1	1
RPTN	Del_1p36.11	1	1
RPTN	Del_1p33	1	1
RPTN	Del_1p13.2	1	1
RPTN	Del_2p12	1	1
RPTN	Del_2q22.1	1	1
RPTN	Del_3q26.31	1	1
RPTN	Del_6q26	1	1
RPTN	Del_7q31.1	1	1
RPTN	Del_8q11.1	1	1
RPTN	Del_16p13.3	1	1
RPTN	Del_19p13.3	1	1
RPTN	Del_21q21.1	1	1
THOC7	BCL9	1	1
THOC7	P2RY13	1	1
THOC7	PLEKHF2	1	1
THOC7	NR1H3	1	1
THOC7	NLRC4	1	1
THOC7	PLAGL2	1	1
THOC7	C11orf30	1	1
THOC7	PRRG1	1	1
THOC7	PCBP1	1	1
THOC7	IFT57	1	1
THOC7	RSPH3	1	1
THOC7	RLIM	1	1
THOC7	MPHOSPH10	1	1
THOC7	VCX2	1	1
THOC7	C2orf29	1	1
THOC7	DDX26B	1	1
THOC7	RBPJ	1	1
THOC7	SLC26A8	1	1
THOC7	TOP2B	1	1
THOC7	DCLK2	1	1
THOC7	C14orf184	1	1
THOC7	HLA-A	1	1
THOC7	FYN	1	1
THOC7	GPATCH8	1	1
THOC7	SLC12A6	1	1
THOC7	NEXN	1	1
THOC7	PRPS1	1	1
THOC7	HIST1H1T	1	1
THOC7	ZNF486	1	1
THOC7	KDM6A	1	1
THOC7	12p-Amp	1	1
THOC7	12q-Amp	1	1
THOC7	17q-Amp	1	1
THOC7	2p-Amp	1	1
THOC7	2q-Amp	1	1
THOC7	6p-Amp	1	1
THOC7	9p-Amp	1	1
THOC7	1p-Del	1	1
THOC7	21q-Del	1	1
THOC7	4q-Del	1	1
THOC7	5q-Del	1	1
THOC7	Amp_2q33.1	1	1
THOC7	Amp_5p12	1	1
THOC7	Amp_6p21.1	1	1
THOC7	Amp_11p15.5	1	1
THOC7	Amp_17q12	1	1
THOC7	Amp_17q24.1	1	1
THOC7	Amp_19q12	1	1
THOC7	Del_1p36.11	1	1
THOC7	Del_1p33	1	1
THOC7	Del_2p12	1	1
THOC7	Del_2q22.1	1	1
THOC7	Del_3p26.3	1	1
THOC7	Del_3p14.2	1	1
THOC7	Del_6p25.3	1	1
THOC7	Del_6q26	1	1
THOC7	Del_7q31.1	1	1
THOC7	Del_12p13.1	1	1
THOC7	Del_16p13.3	1	1
THOC7	Del_19p13.3	1	1
THOC7	Del_21q11.2	1	1
THOC7	Del_21q21.1	1	1
NF1	Del_2p12	1	1
FBXW7	13q-Amp	1	1
FBXW7	20q-Amp	1	1
FBXW7	2q-Amp	1	1
FBXW7	14q-Del	1	1
FBXW7	22q-Del	1	1
FBXW7	Amp_13q12.13	1	1
FBXW7	Amp_13q12.2	1	1
FBXW7	Amp_13q22.1	1	1
FBXW7	Amp_20q12	1	1
FBXW7	Amp_20q13.12	1	1
FBXW7	Del_22q13.32	1	1
CHUK	TPRKB	1	1
CHUK	MVK	1	1
CHUK	PLEKHF2	1	1
CHUK	NR1H3	1	1
CHUK	VCX2	1	1
CHUK	DDX26B	1	1
CHUK	HIST1H1T	1	1
CHUK	16p-Amp	1	1
CHUK	16q-Amp	1	1
CHUK	17q-Amp	1	1
CHUK	2p-Amp	1	1
CHUK	2q-Amp	1	1
CHUK	9p-Amp	1	1
CHUK	14q-Del	1	1
CHUK	1p-Del	1	1
CHUK	5q-Del	1	1
CHUK	Amp_1q31.1	1	1
CHUK	Amp_2q33.1	1	1
CHUK	Amp_10q22.3	1	1
CHUK	Amp_11p15.5	1	1
CHUK	Amp_13q12.13	1	1
CHUK	Amp_15q26.1	1	1
CHUK	Amp_16p11.2	1	1
CHUK	Amp_17q24.1	1	1
CHUK	Del_1p33	1	1
CHUK	Del_2p12	1	1
CHUK	Del_2q22.1	1	1
CHUK	Del_5q12.1	1	1
CHUK	Del_5q23.3	1	1
CHUK	Del_6q26	1	1
CHUK	Del_7q31.1	1	1
CHUK	Del_8q11.1	1	1
CHUK	Del_12p13.1	1	1
CHUK	Del_17p12	1	1
ATXN3L	MVK	1	1
ATXN3L	RSPH3	1	1
ATXN3L	MPHOSPH10	1	1
ATXN3L	VCX2	1	1
ATXN3L	C14orf184	1	1
ATXN3L	GMNN	1	1
ATXN3L	16p-Amp	1	1
ATXN3L	16q-Amp	1	1
ATXN3L	17q-Amp	1	1
ATXN3L	2p-Amp	1	1
ATXN3L	2q-Amp	1	1
ATXN3L	6p-Amp	1	1
ATXN3L	Amp_2q33.1	1	1
ATXN3L	Amp_6p21.1	1	1
ATXN3L	Amp_15q26.1	1	1
ATXN3L	Amp_16p11.2	1	1
ATXN3L	Amp_17q12	1	1
ATXN3L	Amp_19q12	1	1
ATXN3L	Del_2p12	1	1
ATXN3L	Del_3p26.3	1	1
ATXN3L	Del_3p14.2	1	1
ATXN3L	Del_7q31.1	1	1
MGA	VCX2	1	1
MGA	IDH1	1	1
MGA	20p-Amp	1	1
MGA	20q-Amp	1	1
MGA	2p-Amp	1	1
MGA	2q-Amp	1	1
MGA	6p-Amp	1	1
MGA	14q-Del	1	1
MGA	17p-Del	1	1
MGA	18p-Del	1	1
MGA	18q-Del	1	1
MGA	8p-Del	1	1
MGA	Amp_2q33.1	1	1
MGA	Amp_6p21.1	1	1
MGA	Amp_11p15.5	1	1
MGA	Amp_13q22.1	1	1
MGA	Amp_20p12.1	1	1
MGA	Amp_20p11.21	1	1
MGA	Amp_20q11.21	1	1
MGA	Amp_20q12	1	1
MGA	Amp_20q13.12	1	1
MGA	Del_2p12	1	1
MGA	Del_3p26.3	1	1
MGA	Del_6q26	1	1
MGA	Del_8p23.2	1	1
MGA	Del_8p22	1	1
MGA	Del_8q11.1	1	1
MGA	Del_10q21.1	1	1
MGA	Del_10q23.31	1	1
MGA	Del_14q11.2	1	1
MGA	Del_15q15.2	1	1
MGA	Del_15q21.1	1	1
MGA	Del_17p12	1	1
MGA	Del_18p11.31	1	1
MGA	Del_18q12.2	1	1
MGA	Del_18q21.2	1	1
MGA	Del_18q22.1	1	1
MGA	Del_19p13.3	1	1
TPRKB	PLEKHF2	1	1
TPRKB	NR1H3	1	1
TPRKB	PLAGL2	1	1
TPRKB	PCBP1	1	1
TPRKB	IFT57	1	1
TPRKB	MPHOSPH10	1	1
TPRKB	VCX2	1	1
TPRKB	C14orf184	1	1
TPRKB	HLA-A	1	1
TPRKB	FYN	1	1
TPRKB	BIRC3	1	1
TPRKB	HIST1H1T	1	1
TPRKB	IDH1	1	1
TPRKB	16p-Amp	1	1
TPRKB	17q-Amp	1	1
TPRKB	20p-Amp	1	1
TPRKB	20q-Amp	1	1
TPRKB	2p-Amp	1	1
TPRKB	2q-Amp	1	1
TPRKB	14q-Del	1	1
TPRKB	1p-Del	1	1
TPRKB	20p-Del	1	1
TPRKB	21q-Del	1	1
TPRKB	22q-Del	1	1
TPRKB	4p-Del	1	1
TPRKB	4q-Del	1	1
TPRKB	5q-Del	1	1
TPRKB	Amp_2q33.1	1	1
TPRKB	Amp_5p12	1	1
TPRKB	Amp_10q22.3	1	1
TPRKB	Amp_11p15.5	1	1
TPRKB	Amp_16p11.2	1	1
TPRKB	Amp_17q12	1	1
TPRKB	Amp_17q24.1	1	1
TPRKB	Amp_19q12	1	1
TPRKB	Amp_20p12.1	1	1
TPRKB	Amp_20p11.21	1	1
TPRKB	Amp_20q11.21	1	1
TPRKB	Amp_20q12	1	1
TPRKB	Amp_20q13.12	1	1
TPRKB	Del_1p36.11	1	1
TPRKB	Del_1p33	1	1
TPRKB	Del_1p13.2	1	1
TPRKB	Del_2p12	1	1
TPRKB	Del_2q22.1	1	1
TPRKB	Del_3p26.3	1	1
TPRKB	Del_3p14.2	1	1
TPRKB	Del_4p16.1	1	1
TPRKB	Del_4q22.1	1	1
TPRKB	Del_5q12.1	1	1
TPRKB	Del_5q21.2	1	1
TPRKB	Del_5q22.2	1	1
TPRKB	Del_5q23.3	1	1
TPRKB	Del_6q26	1	1
TPRKB	Del_7q31.1	1	1
TPRKB	Del_8q11.1	1	1
TPRKB	Del_10q21.1	1	1
TPRKB	Del_10q23.31	1	1
TPRKB	Del_10q25.2	1	1
TPRKB	Del_12p13.1	1	1
TPRKB	Del_14q11.2	1	1
TPRKB	Del_15q15.2	1	1
TPRKB	Del_15q21.1	1	1
TPRKB	Del_16q23.1	1	1
TPRKB	Del_17q24.3	1	1
TPRKB	Del_19p13.3	1	1
TPRKB	Del_21q11.2	1	1
TPRKB	Del_21q21.1	1	1
TPRKB	Del_22q13.32	1	1
MVK	IQCD	1	1
MVK	GRB2	1	1
MVK	PCBP1	1	1
MVK	RSPH3	1	1
MVK	RLIM	1	1
MVK	VCX2	1	1
MVK	DCLK2	1	1
MVK	PTGDR	1	1
MVK	HIST1H1T	1	1
MVK	GMNN	1	1
MVK	13q-Amp	1	1
MVK	16p-Amp	1	1
MVK	16q-Amp	1	1
MVK	17q-Amp	1	1
MVK	20p-Amp	1	1
MVK	20q-Amp	1	1
MVK	2p-Amp	1	1
MVK	2q-Amp	1	1
MVK	6p-Amp	1	1
MVK	7p-Amp	1	1
MVK	7q-Amp	1	1
MVK	14q-Del	1	1
MVK	15q-Del	1	1
MVK	17p-Del	1	1
MVK	18p-Del	1	1
MVK	18q-Del	1	1
MVK	1p-Del	1	1
MVK	20p-Del	1	1
MVK	22q-Del	1	1
MVK	4p-Del	1	1
MVK	4q-Del	1	1
MVK	5q-Del	1	1
MVK	8p-Del	1	1
MVK	Amp_2q33.1	1	1
MVK	Amp_5p12	1	1
MVK	Amp_6p21.1	1	1
MVK	Amp_10q22.3	1	1
MVK	Amp_11p15.5	1	1
MVK	Amp_13q12.13	1	1
MVK	Amp_13q12.2	1	1
MVK	Amp_13q22.1	1	1
MVK	Amp_15q26.1	1	1
MVK	Amp_16p11.2	1	1
MVK	Amp_17q12	1	1
MVK	Amp_17q24.1	1	1
MVK	Amp_19q12	1	1
MVK	Amp_20p12.1	1	1
MVK	Amp_20p11.21	1	1
MVK	Amp_20q11.21	1	1
MVK	Amp_20q12	1	1
MVK	Amp_20q13.12	1	1
MVK	Del_1p36.11	1	1
MVK	Del_1p33	1	1
MVK	Del_1p13.2	1	1
MVK	Del_2p12	1	1
MVK	Del_2q22.1	1	1
MVK	Del_3p26.3	1	1
MVK	Del_3p14.2	1	1
MVK	Del_3q26.31	1	1
MVK	Del_4p16.1	1	1
MVK	Del_4q22.1	1	1
MVK	Del_4q35.1	1	1
MVK	Del_5q12.1	1	1
MVK	Del_5q21.2	1	1
MVK	Del_5q22.2	1	1
MVK	Del_5q23.3	1	1
MVK	Del_6p25.3	1	1
MVK	Del_6q26	1	1
MVK	Del_7q31.1	1	1
MVK	Del_8p23.2	1	1
MVK	Del_8p22	1	1
MVK	Del_10q21.1	1	1
MVK	Del_10q23.31	1	1
MVK	Del_10q25.2	1	1
MVK	Del_12p13.1	1	1
MVK	Del_14q11.2	1	1
MVK	Del_15q22.33	1	1
MVK	Del_16p13.3	1	1
MVK	Del_17p12	1	1
MVK	Del_17q24.3	1	1
MVK	Del_18p11.31	1	1
MVK	Del_18q12.2	1	1
MVK	Del_18q21.2	1	1
MVK	Del_18q22.1	1	1
MVK	Del_19p13.3	1	1
MVK	Del_22q13.32	1	1
BCL9	NR1H3	1	1
BCL9	ALG12	1	1
BCL9	C14orf184	1	1
BCL9	16p-Amp	1	1
BCL9	16q-Amp	1	1
BCL9	17q-Amp	1	1
BCL9	20q-Amp	1	1
BCL9	2p-Amp	1	1
BCL9	2q-Amp	1	1
BCL9	6p-Amp	1	1
BCL9	7p-Amp	1	1
BCL9	7q-Amp	1	1
BCL9	1p-Del	1	1
BCL9	4p-Del	1	1
BCL9	4q-Del	1	1
BCL9	Amp_2q33.1	1	1
BCL9	Amp_5p12	1	1
BCL9	Amp_6p21.1	1	1
BCL9	Amp_15q26.1	1	1
BCL9	Amp_16p11.2	1	1
BCL9	Amp_17q12	1	1
BCL9	Amp_17q24.1	1	1
BCL9	Amp_20p11.21	1	1
BCL9	Amp_20q11.21	1	1
BCL9	Amp_20q12	1	1
BCL9	Amp_20q13.12	1	1
BCL9	Del_1p33	1	1
BCL9	Del_1p13.2	1	1
BCL9	Del_2p12	1	1
BCL9	Del_2q22.1	1	1
BCL9	Del_3p26.3	1	1
BCL9	Del_4p16.1	1	1
BCL9	Del_6q26	1	1
BCL9	Del_8q11.1	1	1
BCL9	Del_10q25.2	1	1
BCL9	Del_16p13.3	1	1
BCL9	Del_17q24.3	1	1
ZBTB20	PLEKHF2	1	1
ZBTB20	ALG12	1	1
ZBTB20	VCX2	1	1
ZBTB20	C14orf184	1	1
ZBTB20	PRPS1	1	1
ZBTB20	16p-Amp	1	1
ZBTB20	17q-Amp	1	1
ZBTB20	20p-Amp	1	1
ZBTB20	20q-Amp	1	1
ZBTB20	2p-Amp	1	1
ZBTB20	2q-Amp	1	1
ZBTB20	6p-Amp	1	1
ZBTB20	14q-Del	1	1
ZBTB20	17p-Del	1	1
ZBTB20	18p-Del	1	1
ZBTB20	18q-Del	1	1
ZBTB20	1p-Del	1	1
ZBTB20	20p-Del	1	1
ZBTB20	22q-Del	1	1
ZBTB20	4p-Del	1	1
ZBTB20	4q-Del	1	1
ZBTB20	5q-Del	1	1
ZBTB20	8p-Del	1	1
ZBTB20	Amp_1q31.1	1	1
ZBTB20	Amp_2q33.1	1	1
ZBTB20	Amp_5p12	1	1
ZBTB20	Amp_6p21.1	1	1
ZBTB20	Amp_10q22.3	1	1
ZBTB20	Amp_11p15.5	1	1
ZBTB20	Amp_16p11.2	1	1
ZBTB20	Amp_17q12	1	1
ZBTB20	Amp_17q24.1	1	1
ZBTB20	Amp_19q12	1	1
ZBTB20	Amp_20p11.21	1	1
ZBTB20	Amp_20q11.21	1	1
ZBTB20	Amp_20q12	1	1
ZBTB20	Amp_20q13.12	1	1
ZBTB20	Del_1p36.11	1	1
ZBTB20	Del_1p13.2	1	1
ZBTB20	Del_2p12	1	1
ZBTB20	Del_2q22.1	1	1
ZBTB20	Del_3p26.3	1	1
ZBTB20	Del_3q26.31	1	1
ZBTB20	Del_4p16.1	1	1
ZBTB20	Del_4q22.1	1	1
ZBTB20	Del_4q35.1	1	1
ZBTB20	Del_6q26	1	1
ZBTB20	Del_7q31.1	1	1
ZBTB20	Del_8p23.2	1	1
ZBTB20	Del_8p22	1	1
ZBTB20	Del_8q11.1	1	1
ZBTB20	Del_10q21.1	1	1
ZBTB20	Del_10q23.31	1	1
ZBTB20	Del_10q25.2	1	1
ZBTB20	Del_12p13.1	1	1
ZBTB20	Del_14q11.2	1	1
ZBTB20	Del_16p13.3	1	1
ZBTB20	Del_17p12	1	1
ZBTB20	Del_17q24.3	1	1
ZBTB20	Del_18p11.31	1	1
ZBTB20	Del_18q12.2	1	1
ZBTB20	Del_18q21.2	1	1
ZBTB20	Del_18q22.1	1	1
ZBTB20	Del_19p13.3	1	1
ZBTB20	Del_22q13.32	1	1
ERBB2	ALG12	1	1
ERBB2	PLAGL2	1	1
ERBB2	VCX2	1	1
ERBB2	HIST1H1T	1	1
ERBB2	GMNN	1	1
ERBB2	17q-Amp	1	1
ERBB2	2p-Amp	1	1
ERBB2	2q-Amp	1	1
ERBB2	6p-Amp	1	1
ERBB2	9p-Amp	1	1
ERBB2	1p-Del	1	1
ERBB2	Amp_5p12	1	1
ERBB2	Amp_10q22.3	1	1
ERBB2	Amp_15q26.1	1	1
ERBB2	Del_1p13.2	1	1
ERBB2	Del_2p12	1	1
ERBB2	Del_2q22.1	1	1
ERBB2	Del_7q31.1	1	1
ERBB2	Del_10q21.1	1	1
ERBB2	Del_16p13.3	1	1
P2RY13	IQCD	1	1
P2RY13	NR1H3	1	1
P2RY13	ASXL1	1	1
P2RY13	GRB2	1	1
P2RY13	PCBP1	1	1
P2RY13	IFT57	1	1
P2RY13	RLIM	1	1
P2RY13	VCX2	1	1
P2RY13	C2orf29	1	1
P2RY13	C14orf184	1	1
P2RY13	PTGDR	1	1
P2RY13	GMNN	1	1
P2RY13	16p-Amp	1	1
P2RY13	16q-Amp	1	1
P2RY13	2p-Amp	1	1
P2RY13	2q-Amp	1	1
P2RY13	6p-Amp	1	1
P2RY13	9p-Amp	1	1
P2RY13	14q-Del	1	1
P2RY13	15q-Del	1	1
P2RY13	1p-Del	1	1
P2RY13	20p-Del	1	1
P2RY13	21q-Del	1	1
P2RY13	5q-Del	1	1
P2RY13	Amp_1q31.1	1	1
P2RY13	Amp_2q33.1	1	1
P2RY13	Amp_5p12	1	1
P2RY13	Amp_6p21.1	1	1
P2RY13	Amp_10q22.3	1	1
P2RY13	Amp_15q26.1	1	1
P2RY13	Amp_16p11.2	1	1
P2RY13	Amp_19q12	1	1
P2RY13	Amp_20q11.21	1	1
P2RY13	Amp_20q12	1	1
P2RY13	Amp_20q13.12	1	1
P2RY13	Del_1p33	1	1
P2RY13	Del_1p13.2	1	1
P2RY13	Del_2p12	1	1
P2RY13	Del_5q12.1	1	1
P2RY13	Del_6q26	1	1
P2RY13	Del_8q11.1	1	1
P2RY13	Del_12p13.1	1	1
P2RY13	Del_14q11.2	1	1
P2RY13	Del_15q22.33	1	1
P2RY13	Del_16p13.3	1	1
P2RY13	Del_16q23.1	1	1
P2RY13	Del_21q11.2	1	1
P2RY13	Del_21q21.1	1	1
ST3GAL6	PLEKHF2	1	1
ST3GAL6	VCX2	1	1
ST3GAL6	C2orf29	1	1
ST3GAL6	C14orf184	1	1
ST3GAL6	GMNN	1	1
ST3GAL6	16p-Amp	1	1
ST3GAL6	16q-Amp	1	1
ST3GAL6	17q-Amp	1	1
ST3GAL6	2p-Amp	1	1
ST3GAL6	2q-Amp	1	1
ST3GAL6	6p-Amp	1	1
ST3GAL6	9p-Amp	1	1
ST3GAL6	14q-Del	1	1
ST3GAL6	15q-Del	1	1
ST3GAL6	17p-Del	1	1
ST3GAL6	1p-Del	1	1
ST3GAL6	20p-Del	1	1
ST3GAL6	21q-Del	1	1
ST3GAL6	22q-Del	1	1
ST3GAL6	4p-Del	1	1
ST3GAL6	4q-Del	1	1
ST3GAL6	5q-Del	1	1
ST3GAL6	8p-Del	1	1
ST3GAL6	Amp_2q33.1	1	1
ST3GAL6	Amp_6p21.1	1	1
ST3GAL6	Amp_10q22.3	1	1
ST3GAL6	Amp_11p15.5	1	1
ST3GAL6	Amp_15q26.1	1	1
ST3GAL6	Amp_16p11.2	1	1
ST3GAL6	Amp_17q12	1	1
ST3GAL6	Amp_17q24.1	1	1
ST3GAL6	Amp_19q12	1	1
ST3GAL6	Del_1p36.11	1	1
ST3GAL6	Del_1p33	1	1
ST3GAL6	Del_1p13.2	1	1
ST3GAL6	Del_2p12	1	1
ST3GAL6	Del_2q22.1	1	1
ST3GAL6	Del_3p26.3	1	1
ST3GAL6	Del_3q26.31	1	1
ST3GAL6	Del_4p16.1	1	1
ST3GAL6	Del_5q12.1	1	1
ST3GAL6	Del_5q23.3	1	1
ST3GAL6	Del_6q26	1	1
ST3GAL6	Del_7q31.1	1	1
ST3GAL6	Del_8p23.2	1	1
ST3GAL6	Del_8p22	1	1
ST3GAL6	Del_8q11.1	1	1
ST3GAL6	Del_10q21.1	1	1
ST3GAL6	Del_10q23.31	1	1
ST3GAL6	Del_10q25.2	1	1
ST3GAL6	Del_12p13.1	1	1
ST3GAL6	Del_14q11.2	1	1
ST3GAL6	Del_15q11.2	1	1
ST3GAL6	Del_15q21.1	1	1
ST3GAL6	Del_15q22.33	1	1
ST3GAL6	Del_16p13.3	1	1
ST3GAL6	Del_17p12	1	1
ST3GAL6	Del_17q24.3	1	1
ST3GAL6	Del_18q21.2	1	1
ST3GAL6	Del_18q22.1	1	1
ST3GAL6	Del_19p13.3	1	1
ST3GAL6	Del_21q11.2	1	1
ST3GAL6	Del_21q21.1	1	1
ST3GAL6	Del_22q13.32	1	1
IQCD	PLEKHF2	1	1
IQCD	PLAGL2	1	1
IQCD	IFT57	1	1
IQCD	MPHOSPH10	1	1
IQCD	VCX2	1	1
IQCD	DDX26B	1	1
IQCD	C14orf184	1	1
IQCD	GPATCH8	1	1
IQCD	MAP4K3	1	1
IQCD	GMPS	1	1
IQCD	PRPS1	1	1
IQCD	IDH1	1	1
IQCD	GMNN	1	1
IQCD	KDM6A	1	1
IQCD	16p-Amp	1	1
IQCD	16q-Amp	1	1
IQCD	2p-Amp	1	1
IQCD	2q-Amp	1	1
IQCD	6p-Amp	1	1
IQCD	9p-Amp	1	1
IQCD	14q-Del	1	1
IQCD	1p-Del	1	1
IQCD	22q-Del	1	1
IQCD	Amp_2q33.1	1	1
IQCD	Amp_6p21.1	1	1
IQCD	Amp_11p15.5	1	1
IQCD	Amp_16p11.2	1	1
IQCD	Amp_19q12	1	1
IQCD	Amp_20p11.21	1	1
IQCD	Del_1p33	1	1
IQCD	Del_1p13.2	1	1
IQCD	Del_2p12	1	1
IQCD	Del_2q22.1	1	1
IQCD	Del_3p26.3	1	1
IQCD	Del_4p16.1	1	1
IQCD	Del_6p25.3	1	1
IQCD	Del_6q26	1	1
IQCD	Del_7q31.1	1	1
IQCD	Del_8q11.1	1	1
IQCD	Del_10q21.1	1	1
IQCD	Del_10q23.31	1	1
IQCD	Del_10q25.2	1	1
IQCD	Del_12p13.1	1	1
IQCD	Del_14q11.2	1	1
IQCD	Del_16p13.3	1	1
IQCD	Del_17q24.3	1	1
IQCD	Del_19p13.3	1	1
PLEKHF2	GRB2	1	1
PLEKHF2	PCBP1	1	1
PLEKHF2	MPHOSPH10	1	1
PLEKHF2	RBBP7	1	1
PLEKHF2	C14orf184	1	1
PLEKHF2	MAP4K3	1	1
PLEKHF2	PTGDR	1	1
PLEKHF2	IDH1	1	1
PLEKHF2	ZNF486	1	1
PLEKHF2	GMNN	1	1
PLEKHF2	12p-Amp	1	1
PLEKHF2	12q-Amp	1	1
PLEKHF2	16p-Amp	1	1
PLEKHF2	16q-Amp	1	1
PLEKHF2	17q-Amp	1	1
PLEKHF2	2p-Amp	1	1
PLEKHF2	2q-Amp	1	1
PLEKHF2	6p-Amp	1	1
PLEKHF2	8p-Amp	1	1
PLEKHF2	1p-Del	1	1
PLEKHF2	20p-Del	1	1
PLEKHF2	5q-Del	1	1
PLEKHF2	Amp_1q31.1	1	1
PLEKHF2	Amp_2q33.1	1	1
PLEKHF2	Amp_6p21.1	1	1
PLEKHF2	Amp_10q22.3	1	1
PLEKHF2	Amp_15q26.1	1	1
PLEKHF2	Amp_17q12	1	1
PLEKHF2	Amp_17q24.1	1	1
PLEKHF2	Amp_19q12	1	1
PLEKHF2	Del_2p12	1	1
PLEKHF2	Del_3p26.3	1	1
PLEKHF2	Del_3q26.31	1	1
PLEKHF2	Del_4p16.1	1	1
PLEKHF2	Del_5q12.1	1	1
PLEKHF2	Del_5q21.2	1	1
PLEKHF2	Del_5q23.3	1	1
PLEKHF2	Del_6p25.3	1	1
PLEKHF2	Del_6q26	1	1
PLEKHF2	Del_7q31.1	1	1
PLEKHF2	Del_8q11.1	1	1
PLEKHF2	Del_10q25.2	1	1
PLEKHF2	Del_12p13.1	1	1
PLEKHF2	Del_16p13.3	1	1
PLEKHF2	Del_17q24.3	1	1
NR1H3	GRB2	1	1
NR1H3	PLAGL2	1	1
NR1H3	C11orf30	1	1
NR1H3	PCBP1	1	1
NR1H3	IFT57	1	1
NR1H3	RLIM	1	1
NR1H3	MPHOSPH10	1	1
NR1H3	VCX2	1	1
NR1H3	DCLK2	1	1
NR1H3	C14orf184	1	1
NR1H3	FYN	1	1
NR1H3	GPATCH8	1	1
NR1H3	GMPS	1	1
NR1H3	PRPS1	1	1
NR1H3	PTGDR	1	1
NR1H3	BIRC3	1	1
NR1H3	HIST1H1T	1	1
NR1H3	IDH1	1	1
NR1H3	GMNN	1	1
NR1H3	KDM6A	1	1
NR1H3	16p-Amp	1	1
NR1H3	16q-Amp	1	1
NR1H3	17q-Amp	1	1
NR1H3	2p-Amp	1	1
NR1H3	2q-Amp	1	1
NR1H3	6p-Amp	1	1
NR1H3	14q-Del	1	1
NR1H3	15q-Del	1	1
NR1H3	1p-Del	1	1
NR1H3	20p-Del	1	1
NR1H3	4p-Del	1	1
NR1H3	4q-Del	1	1
NR1H3	5q-Del	1	1
NR1H3	Amp_2q33.1	1	1
NR1H3	Amp_5p12	1	1
NR1H3	Amp_10q22.3	1	1
NR1H3	Amp_15q26.1	1	1
NR1H3	Amp_16p11.2	1	1
NR1H3	Amp_17q12	1	1
NR1H3	Amp_17q24.1	1	1
NR1H3	Amp_19q12	1	1
NR1H3	Del_1p13.2	1	1
NR1H3	Del_2p12	1	1
NR1H3	Del_2q22.1	1	1
NR1H3	Del_3p26.3	1	1
NR1H3	Del_3q26.31	1	1
NR1H3	Del_4q22.1	1	1
NR1H3	Del_5q12.1	1	1
NR1H3	Del_5q21.2	1	1
NR1H3	Del_5q22.2	1	1
NR1H3	Del_5q23.3	1	1
NR1H3	Del_6q26	1	1
NR1H3	Del_7q31.1	1	1
NR1H3	Del_8q11.1	1	1
NR1H3	Del_14q11.2	1	1
NR1H3	Del_15q11.2	1	1
NR1H3	Del_15q15.2	1	1
NR1H3	Del_15q21.1	1	1
NR1H3	Del_15q22.33	1	1
NR1H3	Del_16p13.3	1	1
NR1H3	Del_19p13.3	1	1
ALPK2	VCX2	1	1
ALPK2	17q-Amp	1	1
ALPK2	20p-Amp	1	1
ALPK2	20q-Amp	1	1
ALPK2	2p-Amp	1	1
ALPK2	2q-Amp	1	1
ALPK2	18p-Del	1	1
ALPK2	18q-Del	1	1
ALPK2	5q-Del	1	1
ALPK2	Amp_2q33.1	1	1
ALPK2	Amp_10q22.3	1	1
ALPK2	Amp_15q26.1	1	1
ALPK2	Amp_17q12	1	1
ALPK2	Amp_17q24.1	1	1
ALPK2	Amp_19q12	1	1
ALPK2	Amp_20q11.21	1	1
ALPK2	Amp_20q12	1	1
ALPK2	Amp_20q13.12	1	1
ALPK2	Del_2p12	1	1
ALPK2	Del_2q22.1	1	1
ALPK2	Del_3p26.3	1	1
ALPK2	Del_5q12.1	1	1
ALPK2	Del_6q26	1	1
ALPK2	Del_10q21.1	1	1
ALPK2	Del_10q23.31	1	1
ALPK2	Del_10q25.2	1	1
ALPK2	Del_17p12	1	1
ALPK2	Del_18p11.31	1	1
ALPK2	Del_18q12.2	1	1
ALPK2	Del_18q21.2	1	1
ALPK2	Del_18q22.1	1	1
ALPK2	Del_19p13.3	1	1
ASXL1	C14orf184	1	1
ASXL1	HIST1H1T	1	1
ASXL1	16p-Amp	1	1
ASXL1	16q-Amp	1	1
ASXL1	17q-Amp	1	1
ASXL1	2p-Amp	1	1
ASXL1	2q-Amp	1	1
ASXL1	Amp_15q26.1	1	1
ASXL1	Amp_16p11.2	1	1
ASXL1	Amp_17q24.1	1	1
ASXL1	Del_2p12	1	1
ASXL1	Del_3p26.3	1	1
ASXL1	Del_18q21.2	1	1
ALG12	GRB2	1	1
ALG12	C11orf30	1	1
ALG12	PCBP1	1	1
ALG12	IFT57	1	1
ALG12	RSPH3	1	1
ALG12	RLIM	1	1
ALG12	VCX2	1	1
ALG12	C2orf29	1	1
ALG12	RBPJ	1	1
ALG12	DCLK2	1	1
ALG12	C14orf184	1	1
ALG12	FYN	1	1
ALG12	MAP4K3	1	1
ALG12	NEXN	1	1
ALG12	GMPS	1	1
ALG12	PTGDR	1	1
ALG12	BIRC3	1	1
ALG12	HIST1H1T	1	1
ALG12	GMNN	1	1
ALG12	13q-Amp	1	1
ALG12	16p-Amp	1	1
ALG12	16q-Amp	1	1
ALG12	17q-Amp	1	1
ALG12	2p-Amp	1	1
ALG12	2q-Amp	1	1
ALG12	6p-Amp	1	1
ALG12	9p-Amp	1	1
ALG12	14q-Del	1	1
ALG12	15q-Del	1	1
ALG12	17p-Del	1	1
ALG12	1p-Del	1	1
ALG12	20p-Del	1	1
ALG12	21q-Del	1	1
ALG12	22q-Del	1	1
ALG12	4p-Del	1	1
ALG12	4q-Del	1	1
ALG12	5q-Del	1	1
ALG12	8p-Del	1	1
ALG12	Amp_2q33.1	1	1
ALG12	Amp_6p21.1	1	1
ALG12	Amp_10q22.3	1	1
ALG12	Amp_11p15.5	1	1
ALG12	Amp_13q12.13	1	1
ALG12	Amp_13q12.2	1	1
ALG12	Amp_15q26.1	1	1
ALG12	Amp_16p11.2	1	1
ALG12	Amp_17q12	1	1
ALG12	Amp_17q24.1	1	1
ALG12	Amp_19q12	1	1
ALG12	Del_1p36.11	1	1
ALG12	Del_1p33	1	1
ALG12	Del_1p13.2	1	1
ALG12	Del_2p12	1	1
ALG12	Del_2q22.1	1	1
ALG12	Del_3p26.3	1	1
ALG12	Del_4p16.1	1	1
ALG12	Del_4q22.1	1	1
ALG12	Del_4q35.1	1	1
ALG12	Del_5q12.1	1	1
ALG12	Del_5q21.2	1	1
ALG12	Del_5q23.3	1	1
ALG12	Del_6p25.3	1	1
ALG12	Del_6q26	1	1
ALG12	Del_7q31.1	1	1
ALG12	Del_8p23.2	1	1
ALG12	Del_8p22	1	1
ALG12	Del_10q21.1	1	1
ALG12	Del_10q23.31	1	1
ALG12	Del_12p13.1	1	1
ALG12	Del_14q11.2	1	1
ALG12	Del_15q11.2	1	1
ALG12	Del_15q15.2	1	1
ALG12	Del_15q21.1	1	1
ALG12	Del_15q22.33	1	1
ALG12	Del_16p13.3	1	1
ALG12	Del_17p12	1	1
ALG12	Del_17q24.3	1	1
ALG12	Del_19p13.3	1	1
ALG12	Del_21q11.2	1	1
ALG12	Del_21q21.1	1	1
ALG12	Del_22q13.32	1	1
PTCH1	20q-Amp	1	1
PTCH1	18p-Del	1	1
PTCH1	18q-Del	1	1
PTCH1	Amp_20q12	1	1
PTCH1	Del_2p12	1	1
PTCH1	Del_6q26	1	1
PTCH1	Del_8q11.1	1	1
PTCH1	Del_18p11.31	1	1
PTCH1	Del_18q12.2	1	1
PTCH1	Del_18q21.2	1	1
PTCH1	Del_18q22.1	1	1
GRB2	C2orf29	1	1
GRB2	GPATCH8	1	1
GRB2	CDK12	1	1
GRB2	GMPS	1	1
GRB2	PRPS1	1	1
GRB2	IDH1	1	1
GRB2	12p-Amp	1	1
GRB2	12q-Amp	1	1
GRB2	16p-Amp	1	1
GRB2	17q-Amp	1	1
GRB2	2q-Amp	1	1
GRB2	14q-Del	1	1
GRB2	20p-Del	1	1
GRB2	21q-Del	1	1
GRB2	22q-Del	1	1
GRB2	4p-Del	1	1
GRB2	4q-Del	1	1
GRB2	5q-Del	1	1
GRB2	8p-Del	1	1
GRB2	Amp_1q31.1	1	1
GRB2	Amp_2q33.1	1	1
GRB2	Amp_5p12	1	1
GRB2	Amp_11p15.5	1	1
GRB2	Amp_12p13.33	1	1
GRB2	Amp_16p11.2	1	1
GRB2	Amp_17q12	1	1
GRB2	Amp_17q24.1	1	1
GRB2	Del_2p12	1	1
GRB2	Del_2q22.1	1	1
GRB2	Del_3p26.3	1	1
GRB2	Del_4q22.1	1	1
GRB2	Del_4q35.1	1	1
GRB2	Del_5q12.1	1	1
GRB2	Del_6p25.3	1	1
GRB2	Del_6q26	1	1
GRB2	Del_7q31.1	1	1
GRB2	Del_8p22	1	1
GRB2	Del_8q11.1	1	1
GRB2	Del_10q21.1	1	1
GRB2	Del_10q23.31	1	1
GRB2	Del_10q25.2	1	1
GRB2	Del_12p13.1	1	1
GRB2	Del_14q11.2	1	1
GRB2	Del_15q15.2	1	1
GRB2	Del_15q21.1	1	1
GRB2	Del_16p13.3	1	1
GRB2	Del_17q24.3	1	1
GRB2	Del_19p13.3	1	1
GRB2	Del_22q13.32	1	1
NLRC4	VCX2	1	1
NLRC4	16p-Amp	1	1
NLRC4	16q-Amp	1	1
NLRC4	2q-Amp	1	1
NLRC4	17p-Del	1	1
NLRC4	18p-Del	1	1
NLRC4	18q-Del	1	1
NLRC4	1p-Del	1	1
NLRC4	4q-Del	1	1
NLRC4	5q-Del	1	1
NLRC4	Amp_2q33.1	1	1
NLRC4	Amp_15q26.1	1	1
NLRC4	Amp_17q12	1	1
NLRC4	Amp_17q24.1	1	1
NLRC4	Amp_19q12	1	1
NLRC4	Del_1p13.2	1	1
NLRC4	Del_2p12	1	1
NLRC4	Del_2q22.1	1	1
NLRC4	Del_3p26.3	1	1
NLRC4	Del_5q23.3	1	1
NLRC4	Del_6q26	1	1
NLRC4	Del_7q31.1	1	1
NLRC4	Del_8q11.1	1	1
NLRC4	Del_12p13.1	1	1
NLRC4	Del_17p12	1	1
NLRC4	Del_17q24.3	1	1
NLRC4	Del_18q12.2	1	1
NLRC4	Del_18q21.2	1	1
NLRC4	Del_18q22.1	1	1
NLRC4	Del_19p13.3	1	1
NLRC4	Del_21q21.1	1	1
PLAGL2	PCBP1	1	1
PLAGL2	RSPH3	1	1
PLAGL2	C2orf29	1	1
PLAGL2	RBBP7	1	1
PLAGL2	L1TD1	1	1
PLAGL2	DCLK2	1	1
PLAGL2	FKBP9	1	1
PLAGL2	C14orf184	1	1
PLAGL2	FYN	1	1
PLAGL2	MAP4K3	1	1
PLAGL2	NEXN	1	1
PLAGL2	GMPS	1	1
PLAGL2	HIST1H1T	1	1
PLAGL2	ZNF486	1	1
PLAGL2	GMNN	1	1
PLAGL2	16p-Amp	1	1
PLAGL2	16q-Amp	1	1
PLAGL2	17q-Amp	1	1
PLAGL2	2p-Amp	1	1
PLAGL2	2q-Amp	1	1
PLAGL2	6p-Amp	1	1
PLAGL2	9p-Amp	1	1
PLAGL2	14q-Del	1	1
PLAGL2	15q-Del	1	1
PLAGL2	17p-Del	1	1
PLAGL2	18p-Del	1	1
PLAGL2	18q-Del	1	1
PLAGL2	1p-Del	1	1
PLAGL2	20p-Del	1	1
PLAGL2	22q-Del	1	1
PLAGL2	4p-Del	1	1
PLAGL2	4q-Del	1	1
PLAGL2	5q-Del	1	1
PLAGL2	8p-Del	1	1
PLAGL2	Amp_1q31.1	1	1
PLAGL2	Amp_2q33.1	1	1
PLAGL2	Amp_6p21.1	1	1
PLAGL2	Amp_10q22.3	1	1
PLAGL2	Amp_11p15.5	1	1
PLAGL2	Amp_15q26.1	1	1
PLAGL2	Amp_16p11.2	1	1
PLAGL2	Amp_17q12	1	1
PLAGL2	Amp_17q24.1	1	1
PLAGL2	Amp_19q12	1	1
PLAGL2	Del_1p36.11	1	1
PLAGL2	Del_1p33	1	1
PLAGL2	Del_1p13.2	1	1
PLAGL2	Del_2p12	1	1
PLAGL2	Del_2q22.1	1	1
PLAGL2	Del_3p26.3	1	1
PLAGL2	Del_3p14.2	1	1
PLAGL2	Del_3q26.31	1	1
PLAGL2	Del_4p16.1	1	1
PLAGL2	Del_4q22.1	1	1
PLAGL2	Del_4q35.1	1	1
PLAGL2	Del_5q12.1	1	1
PLAGL2	Del_5q23.3	1	1
PLAGL2	Del_6p25.3	1	1
PLAGL2	Del_6q26	1	1
PLAGL2	Del_7q31.1	1	1
PLAGL2	Del_8q11.1	1	1
PLAGL2	Del_10q21.1	1	1
PLAGL2	Del_10q23.31	1	1
PLAGL2	Del_10q25.2	1	1
PLAGL2	Del_14q11.2	1	1
PLAGL2	Del_15q11.2	1	1
PLAGL2	Del_15q15.2	1	1
PLAGL2	Del_15q21.1	1	1
PLAGL2	Del_15q22.33	1	1
PLAGL2	Del_16p13.3	1	1
PLAGL2	Del_17p12	1	1
PLAGL2	Del_17q24.3	1	1
PLAGL2	Del_18p11.31	1	1
PLAGL2	Del_18q12.2	1	1
PLAGL2	Del_18q21.2	1	1
PLAGL2	Del_18q22.1	1	1
PLAGL2	Del_19p13.3	1	1
PLAGL2	Del_22q13.32	1	1
C11orf30	C14orf184	1	1
C11orf30	PRPS1	1	1
C11orf30	HIST1H1T	1	1
C11orf30	GMNN	1	1
C11orf30	13q-Amp	1	1
C11orf30	16p-Amp	1	1
C11orf30	16q-Amp	1	1
C11orf30	20q-Amp	1	1
C11orf30	6p-Amp	1	1
C11orf30	7q-Amp	1	1
C11orf30	9p-Amp	1	1
C11orf30	1p-Del	1	1
C11orf30	20p-Del	1	1
C11orf30	4p-Del	1	1
C11orf30	4q-Del	1	1
C11orf30	5q-Del	1	1
C11orf30	Amp_1q31.1	1	1
C11orf30	Amp_5p12	1	1
C11orf30	Amp_6p21.1	1	1
C11orf30	Amp_10q22.3	1	1
C11orf30	Amp_13q12.13	1	1
C11orf30	Amp_13q12.2	1	1
C11orf30	Amp_13q22.1	1	1
C11orf30	Amp_15q26.1	1	1
C11orf30	Amp_16p11.2	1	1
C11orf30	Amp_19q12	1	1
C11orf30	Amp_20q11.21	1	1
C11orf30	Amp_20q12	1	1
C11orf30	Amp_20q13.12	1	1
C11orf30	Del_1p33	1	1
C11orf30	Del_2p12	1	1
C11orf30	Del_2q22.1	1	1
C11orf30	Del_3p26.3	1	1
C11orf30	Del_3q26.31	1	1
C11orf30	Del_4p16.1	1	1
C11orf30	Del_4q35.1	1	1
C11orf30	Del_5q12.1	1	1
C11orf30	Del_5q21.2	1	1
C11orf30	Del_6q26	1	1
C11orf30	Del_8q11.1	1	1
C11orf30	Del_10q21.1	1	1
C11orf30	Del_10q23.31	1	1
C11orf30	Del_10q25.2	1	1
C11orf30	Del_16p13.3	1	1
C11orf30	Del_17q24.3	1	1
C11orf30	Del_18p11.31	1	1
C11orf30	Del_18q21.2	1	1
C11orf30	Del_18q22.1	1	1
DIP2B	VCX2	1	1
DIP2B	PRPS1	1	1
DIP2B	IDH1	1	1
DIP2B	2p-Amp	1	1
DIP2B	2q-Amp	1	1
DIP2B	8p-Amp	1	1
DIP2B	5q-Del	1	1
DIP2B	Amp_2q33.1	1	1
DIP2B	Amp_10q22.3	1	1
DIP2B	Amp_11p15.5	1	1
DIP2B	Amp_15q26.1	1	1
DIP2B	Del_2p12	1	1
DIP2B	Del_8q11.1	1	1
DIP2B	Del_12p13.1	1	1
DIP2B	Del_16p13.3	1	1
PRRG1	RSPH3	1	1
PRRG1	C14orf184	1	1
PRRG1	16p-Amp	1	1
PRRG1	16q-Amp	1	1
PRRG1	17q-Amp	1	1
PRRG1	2p-Amp	1	1
PRRG1	2q-Amp	1	1
PRRG1	1p-Del	1	1
PRRG1	20p-Del	1	1
PRRG1	21q-Del	1	1
PRRG1	22q-Del	1	1
PRRG1	5q-Del	1	1
PRRG1	Amp_2q33.1	1	1
PRRG1	Amp_10q22.3	1	1
PRRG1	Amp_11p15.5	1	1
PRRG1	Amp_15q26.1	1	1
PRRG1	Amp_19q12	1	1
PRRG1	Amp_20q13.12	1	1
PRRG1	Del_2p12	1	1
PRRG1	Del_2q22.1	1	1
PRRG1	Del_3p26.3	1	1
PRRG1	Del_3q26.31	1	1
PRRG1	Del_4q35.1	1	1
PRRG1	Del_5q12.1	1	1
PRRG1	Del_6p25.3	1	1
PRRG1	Del_6q26	1	1
PRRG1	Del_7q31.1	1	1
PRRG1	Del_10q21.1	1	1
PRRG1	Del_10q23.31	1	1
PRRG1	Del_10q25.2	1	1
PRRG1	Del_16p13.3	1	1
PRRG1	Del_17q24.3	1	1
PRRG1	Del_19p13.3	1	1
PRRG1	Del_21q11.2	1	1
PRRG1	Del_21q21.1	1	1
PRRG1	Del_22q13.32	1	1
PCBP1	IFT57	1	1
PCBP1	RSPH3	1	1
PCBP1	VCX2	1	1
PCBP1	DDX26B	1	1
PCBP1	C14orf184	1	1
PCBP1	BCORL1	1	1
PCBP1	GPATCH8	1	1
PCBP1	MAP4K3	1	1
PCBP1	PRPS1	1	1
PCBP1	HIST1H1T	1	1
PCBP1	GMNN	1	1
PCBP1	16p-Amp	1	1
PCBP1	16q-Amp	1	1
PCBP1	17q-Amp	1	1
PCBP1	2p-Amp	1	1
PCBP1	2q-Amp	1	1
PCBP1	6p-Amp	1	1
PCBP1	8p-Amp	1	1
PCBP1	9p-Amp	1	1
PCBP1	1p-Del	1	1
PCBP1	20p-Del	1	1
PCBP1	22q-Del	1	1
PCBP1	4p-Del	1	1
PCBP1	5q-Del	1	1
PCBP1	Amp_1q31.1	1	1
PCBP1	Amp_5p12	1	1
PCBP1	Amp_6p21.1	1	1
PCBP1	Amp_10q22.3	1	1
PCBP1	Amp_15q26.1	1	1
PCBP1	Amp_16p11.2	1	1
PCBP1	Amp_17q12	1	1
PCBP1	Amp_17q24.1	1	1
PCBP1	Amp_19q12	1	1
PCBP1	Del_1p33	1	1
PCBP1	Del_1p13.2	1	1
PCBP1	Del_2p12	1	1
PCBP1	Del_2q22.1	1	1
PCBP1	Del_3q26.31	1	1
PCBP1	Del_4p16.1	1	1
PCBP1	Del_5q21.2	1	1
PCBP1	Del_5q23.3	1	1
PCBP1	Del_7q31.1	1	1
PCBP1	Del_8q11.1	1	1
PCBP1	Del_10q25.2	1	1
PCBP1	Del_12p13.1	1	1
PCBP1	Del_14q11.2	1	1
PCBP1	Del_16p13.3	1	1
PCBP1	Del_16q23.1	1	1
PCBP1	Del_22q13.32	1	1
PIK3R1	2p-Amp	1	1
PIK3R1	2q-Amp	1	1
PIK3R1	6p-Amp	1	1
PIK3R1	1p-Del	1	1
PIK3R1	Amp_6p21.1	1	1
PIK3R1	Amp_15q26.1	1	1
PIK3R1	Amp_19q12	1	1
PIK3R1	Del_1p33	1	1
PIK3R1	Del_2p12	1	1
PIK3R1	Del_8q11.1	1	1
IFT57	RLIM	1	1
IFT57	VCX2	1	1
IFT57	C2orf29	1	1
IFT57	RBPJ	1	1
IFT57	ALDH1A3	1	1
IFT57	PRPS1	1	1
IFT57	PTGDR	1	1
IFT57	HIST1H1T	1	1
IFT57	GMNN	1	1
IFT57	12q-Amp	1	1
IFT57	16p-Amp	1	1
IFT57	16q-Amp	1	1
IFT57	17q-Amp	1	1
IFT57	2q-Amp	1	1
IFT57	14q-Del	1	1
IFT57	15q-Del	1	1
IFT57	1p-Del	1	1
IFT57	22q-Del	1	1
IFT57	4p-Del	1	1
IFT57	4q-Del	1	1
IFT57	5q-Del	1	1
IFT57	8p-Del	1	1
IFT57	Amp_1q31.1	1	1
IFT57	Amp_5p12	1	1
IFT57	Amp_11p15.5	1	1
IFT57	Amp_15q26.1	1	1
IFT57	Amp_16p11.2	1	1
IFT57	Amp_17q12	1	1
IFT57	Amp_17q24.1	1	1
IFT57	Amp_19q12	1	1
IFT57	Del_1p33	1	1
IFT57	Del_1p13.2	1	1
IFT57	Del_2p12	1	1
IFT57	Del_2q22.1	1	1
IFT57	Del_3p26.3	1	1
IFT57	Del_4p16.1	1	1
IFT57	Del_4q22.1	1	1
IFT57	Del_4q35.1	1	1
IFT57	Del_5q12.1	1	1
IFT57	Del_5q21.2	1	1
IFT57	Del_5q23.3	1	1
IFT57	Del_6p25.3	1	1
IFT57	Del_6q26	1	1
IFT57	Del_7q31.1	1	1
IFT57	Del_8q11.1	1	1
IFT57	Del_10q21.1	1	1
IFT57	Del_10q25.2	1	1
IFT57	Del_12p13.1	1	1
IFT57	Del_14q11.2	1	1
IFT57	Del_15q11.2	1	1
IFT57	Del_15q15.2	1	1
IFT57	Del_15q21.1	1	1
IFT57	Del_15q22.33	1	1
IFT57	Del_17q24.3	1	1
IFT57	Del_19p13.3	1	1
IFT57	Del_22q13.32	1	1
RSPH3	RLIM	1	1
RSPH3	VCX2	1	1
RSPH3	DDX26B	1	1
RSPH3	RBPJ	1	1
RSPH3	DCLK2	1	1
RSPH3	HLA-A	1	1
RSPH3	PRPS1	1	1
RSPH3	PTGDR	1	1
RSPH3	HIST1H1T	1	1
RSPH3	IDH1	1	1
RSPH3	12p-Amp	1	1
RSPH3	12q-Amp	1	1
RSPH3	16p-Amp	1	1
RSPH3	16q-Amp	1	1
RSPH3	15q-Del	1	1
RSPH3	1p-Del	1	1
RSPH3	20p-Del	1	1
RSPH3	4p-Del	1	1
RSPH3	4q-Del	1	1
RSPH3	5q-Del	1	1
RSPH3	Amp_5p12	1	1
RSPH3	Amp_11p15.5	1	1
RSPH3	Amp_16p11.2	1	1
RSPH3	Amp_19q12	1	1
RSPH3	Del_1p33	1	1
RSPH3	Del_1p13.2	1	1
RSPH3	Del_2p12	1	1
RSPH3	Del_3p26.3	1	1
RSPH3	Del_4p16.1	1	1
RSPH3	Del_4q22.1	1	1
RSPH3	Del_4q35.1	1	1
RSPH3	Del_6q26	1	1
RSPH3	Del_7q31.1	1	1
RSPH3	Del_8q11.1	1	1
RSPH3	Del_10q23.31	1	1
RSPH3	Del_15q11.2	1	1
RSPH3	Del_15q15.2	1	1
RSPH3	Del_15q21.1	1	1
RSPH3	Del_15q22.33	1	1
RSPH3	Del_16p13.3	1	1
RSPH3	Del_16q23.1	1	1
RSPH3	Del_19p13.3	1	1
RLIM	C14orf184	1	1
RLIM	BCORL1	1	1
RLIM	HIST1H1T	1	1
RLIM	GMNN	1	1
RLIM	16p-Amp	1	1
RLIM	16q-Amp	1	1
RLIM	17q-Amp	1	1
RLIM	2p-Amp	1	1
RLIM	2q-Amp	1	1
RLIM	8p-Amp	1	1
RLIM	15q-Del	1	1
RLIM	20p-Del	1	1
RLIM	Amp_2q33.1	1	1
RLIM	Amp_5p12	1	1
RLIM	Amp_10q22.3	1	1
RLIM	Amp_15q26.1	1	1
RLIM	Amp_17q12	1	1
RLIM	Amp_17q24.1	1	1
RLIM	Del_2p12	1	1
RLIM	Del_2q22.1	1	1
RLIM	Del_3p26.3	1	1
RLIM	Del_3p14.2	1	1
RLIM	Del_6p25.3	1	1
RLIM	Del_6q26	1	1
RLIM	Del_7q31.1	1	1
RLIM	Del_10q21.1	1	1
RLIM	Del_10q23.31	1	1
RLIM	Del_10q25.2	1	1
RLIM	Del_16q23.1	1	1
RLIM	Del_17q24.3	1	1
ROS1	16p-Amp	1	1
ROS1	2p-Amp	1	1
ROS1	2q-Amp	1	1
ROS1	Amp_20q11.21	1	1
ROS1	Amp_20q12	1	1
ROS1	Amp_20q13.12	1	1
ROS1	Del_2p12	1	1
ROS1	Del_2q22.1	1	1
ROS1	Del_6q26	1	1
ROS1	Del_8q11.1	1	1
ROS1	Del_14q11.2	1	1
ROS1	Del_16p13.3	1	1
ROS1	Del_18q21.2	1	1
MPHOSPH10	VCX2	1	1
MPHOSPH10	C2orf29	1	1
MPHOSPH10	C14orf184	1	1
MPHOSPH10	MAP4K3	1	1
MPHOSPH10	HIST1H1T	1	1
MPHOSPH10	GMNN	1	1
MPHOSPH10	16p-Amp	1	1
MPHOSPH10	16q-Amp	1	1
MPHOSPH10	17q-Amp	1	1
MPHOSPH10	2p-Amp	1	1
MPHOSPH10	2q-Amp	1	1
MPHOSPH10	6p-Amp	1	1
MPHOSPH10	14q-Del	1	1
MPHOSPH10	15q-Del	1	1
MPHOSPH10	17p-Del	1	1
MPHOSPH10	18p-Del	1	1
MPHOSPH10	18q-Del	1	1
MPHOSPH10	1p-Del	1	1
MPHOSPH10	20p-Del	1	1
MPHOSPH10	21q-Del	1	1
MPHOSPH10	22q-Del	1	1
MPHOSPH10	4p-Del	1	1
MPHOSPH10	4q-Del	1	1
MPHOSPH10	5q-Del	1	1
MPHOSPH10	Amp_1q31.1	1	1
MPHOSPH10	Amp_2q33.1	1	1
MPHOSPH10	Amp_6p21.1	1	1
MPHOSPH10	Amp_15q26.1	1	1
MPHOSPH10	Amp_17q12	1	1
MPHOSPH10	Amp_17q24.1	1	1
MPHOSPH10	Del_1p36.11	1	1
MPHOSPH10	Del_1p33	1	1
MPHOSPH10	Del_1p13.2	1	1
MPHOSPH10	Del_2p12	1	1
MPHOSPH10	Del_2q22.1	1	1
MPHOSPH10	Del_3p26.3	1	1
MPHOSPH10	Del_3q26.31	1	1
MPHOSPH10	Del_4p16.1	1	1
MPHOSPH10	Del_4q22.1	1	1
MPHOSPH10	Del_4q35.1	1	1
MPHOSPH10	Del_5q12.1	1	1
MPHOSPH10	Del_6q26	1	1
MPHOSPH10	Del_8q11.1	1	1
MPHOSPH10	Del_10q21.1	1	1
MPHOSPH10	Del_10q25.2	1	1
MPHOSPH10	Del_12p13.1	1	1
MPHOSPH10	Del_15q22.33	1	1
MPHOSPH10	Del_16p13.3	1	1
MPHOSPH10	Del_17p12	1	1
MPHOSPH10	Del_17q24.3	1	1
MPHOSPH10	Del_18p11.31	1	1
MPHOSPH10	Del_18q21.2	1	1
MPHOSPH10	Del_18q22.1	1	1
MPHOSPH10	Del_19p13.3	1	1
MPHOSPH10	Del_21q21.1	1	1
MPHOSPH10	Del_22q13.32	1	1
VCX2	RBPJ	1	1
VCX2	SLC26A8	1	1
VCX2	RBBP7	1	1
VCX2	L1TD1	1	1
VCX2	DCLK2	1	1
VCX2	C14orf184	1	1
VCX2	FYN	1	1
VCX2	ALDH1A3	1	1
VCX2	BCORL1	1	1
VCX2	MAP4K3	1	1
VCX2	SETD2	1	1
VCX2	NEXN	1	1
VCX2	GMPS	1	1
VCX2	PRPS1	1	1
VCX2	BIRC3	1	1
VCX2	HIST1H1T	1	1
VCX2	ZNF486	1	1
VCX2	GMNN	1	1
VCX2	12p-Amp	1	1
VCX2	12q-Amp	1	1
VCX2	16p-Amp	1	1
VCX2	16q-Amp	1	1
VCX2	17q-Amp	1	1
VCX2	2p-Amp	1	1
VCX2	2q-Amp	1	1
VCX2	6p-Amp	1	1
VCX2	9p-Amp	1	1
VCX2	20p-Del	1	1
VCX2	Amp_1q31.1	1	1
VCX2	Amp_5p12	1	1
VCX2	Amp_15q26.1	1	1
VCX2	Amp_16p11.2	1	1
VCX2	Amp_17q12	1	1
VCX2	Amp_17q24.1	1	1
VCX2	Del_2p12	1	1
VCX2	Del_2q22.1	1	1
VCX2	Del_3p14.2	1	1
VCX2	Del_3q26.31	1	1
VCX2	Del_6p25.3	1	1
VCX2	Del_6q26	1	1
VCX2	Del_7q31.1	1	1
VCX2	Del_8q11.1	1	1
VCX2	Del_10q23.31	1	1
VCX2	Del_10q25.2	1	1
VCX2	Del_16p13.3	1	1
VCX2	Del_16q23.1	1	1
VCX2	Del_17q24.3	1	1
VCX2	Del_19p13.3	1	1
C2orf29	DDX26B	1	1
C2orf29	RBPJ	1	1
C2orf29	DCLK2	1	1
C2orf29	HLA-A	1	1
C2orf29	GPATCH8	1	1
C2orf29	PTGDR	1	1
C2orf29	HIST1H1T	1	1
C2orf29	16p-Amp	1	1
C2orf29	16q-Amp	1	1
C2orf29	17q-Amp	1	1
C2orf29	2p-Amp	1	1
C2orf29	2q-Amp	1	1
C2orf29	14q-Del	1	1
C2orf29	1p-Del	1	1
C2orf29	20p-Del	1	1
C2orf29	4p-Del	1	1
C2orf29	5q-Del	1	1
C2orf29	Amp_2q33.1	1	1
C2orf29	Amp_5p12	1	1
C2orf29	Amp_15q26.1	1	1
C2orf29	Amp_16p11.2	1	1
C2orf29	Amp_17q12	1	1
C2orf29	Amp_19q12	1	1
C2orf29	Del_1p33	1	1
C2orf29	Del_2p12	1	1
C2orf29	Del_3p26.3	1	1
C2orf29	Del_4p16.1	1	1
C2orf29	Del_5q23.3	1	1
C2orf29	Del_7q31.1	1	1
C2orf29	Del_10q21.1	1	1
C2orf29	Del_12p13.1	1	1
C2orf29	Del_14q11.2	1	1
C2orf29	Del_16q23.1	1	1
C2orf29	Del_17q24.3	1	1
DDX26B	DCLK2	1	1
DDX26B	C14orf184	1	1
DDX26B	PTGDR	1	1
DDX26B	IDH1	1	1
DDX26B	GMNN	1	1
DDX26B	12p-Amp	1	1
DDX26B	12q-Amp	1	1
DDX26B	16p-Amp	1	1
DDX26B	16q-Amp	1	1
DDX26B	17q-Amp	1	1
DDX26B	20q-Amp	1	1
DDX26B	2p-Amp	1	1
DDX26B	2q-Amp	1	1
DDX26B	6p-Amp	1	1
DDX26B	7p-Amp	1	1
DDX26B	7q-Amp	1	1
DDX26B	14q-Del	1	1
DDX26B	15q-Del	1	1
DDX26B	17p-Del	1	1
DDX26B	18p-Del	1	1
DDX26B	18q-Del	1	1
DDX26B	1p-Del	1	1
DDX26B	20p-Del	1	1
DDX26B	4p-Del	1	1
DDX26B	4q-Del	1	1
DDX26B	5q-Del	1	1
DDX26B	8p-Del	1	1
DDX26B	Amp_2q33.1	1	1
DDX26B	Amp_5p12	1	1
DDX26B	Amp_6p21.1	1	1
DDX26B	Amp_10q22.3	1	1
DDX26B	Amp_15q26.1	1	1
DDX26B	Amp_16p11.2	1	1
DDX26B	Amp_17q12	1	1
DDX26B	Amp_17q24.1	1	1
DDX26B	Amp_19q12	1	1
DDX26B	Amp_20p11.21	1	1
DDX26B	Amp_20q11.21	1	1
DDX26B	Amp_20q12	1	1
DDX26B	Amp_20q13.12	1	1
DDX26B	Del_1p13.2	1	1
DDX26B	Del_2p12	1	1
DDX26B	Del_2q22.1	1	1
DDX26B	Del_3p26.3	1	1
DDX26B	Del_3q26.31	1	1
DDX26B	Del_4p16.1	1	1
DDX26B	Del_4q22.1	1	1
DDX26B	Del_4q35.1	1	1
DDX26B	Del_5q12.1	1	1
DDX26B	Del_5q21.2	1	1
DDX26B	Del_5q23.3	1	1
DDX26B	Del_6q26	1	1
DDX26B	Del_7q31.1	1	1
DDX26B	Del_8p22	1	1
DDX26B	Del_8q11.1	1	1
DDX26B	Del_14q11.2	1	1
DDX26B	Del_15q22.33	1	1
DDX26B	Del_16p13.3	1	1
DDX26B	Del_17p12	1	1
DDX26B	Del_17q24.3	1	1
DDX26B	Del_18p11.31	1	1
DDX26B	Del_18q12.2	1	1
DDX26B	Del_18q21.2	1	1
DDX26B	Del_18q22.1	1	1
DDX26B	Del_19p13.3	1	1
RBPJ	C14orf184	1	1
RBPJ	PRPS1	1	1
RBPJ	GMNN	1	1
RBPJ	16p-Amp	1	1
RBPJ	16q-Amp	1	1
RBPJ	20p-Amp	1	1
RBPJ	6p-Amp	1	1
RBPJ	15q-Del	1	1
RBPJ	4q-Del	1	1
RBPJ	5q-Del	1	1
RBPJ	Amp_6p21.1	1	1
RBPJ	Amp_10q22.3	1	1
RBPJ	Amp_11p15.5	1	1
RBPJ	Amp_15q26.1	1	1
RBPJ	Del_2p12	1	1
RBPJ	Del_3p26.3	1	1
RBPJ	Del_3p14.2	1	1
RBPJ	Del_3q26.31	1	1
RBPJ	Del_4q22.1	1	1
RBPJ	Del_5q12.1	1	1
RBPJ	Del_5q23.3	1	1
RBPJ	Del_6p25.3	1	1
RBPJ	Del_6q26	1	1
RBPJ	Del_7q31.1	1	1
RBPJ	Del_8q11.1	1	1
RBPJ	Del_10q23.31	1	1
RBPJ	Del_10q25.2	1	1
RBPJ	Del_12p13.1	1	1
RBPJ	Del_15q11.2	1	1
RBPJ	Del_15q15.2	1	1
RBPJ	Del_15q21.1	1	1
RBPJ	Del_15q22.33	1	1
RBPJ	Del_16p13.3	1	1
RBPJ	Del_16q23.1	1	1
RBPJ	Del_17p12	1	1
RBPJ	Del_17q24.3	1	1
RBPJ	Del_18q12.2	1	1
RBPJ	Del_18q21.2	1	1
RBPJ	Del_18q22.1	1	1
RBPJ	Del_19p13.3	1	1
SMAD4	Amp_15q26.1	1	1
SLC26A8	C14orf184	1	1
SLC26A8	HIST1H1T	1	1
SLC26A8	13q-Amp	1	1
SLC26A8	16p-Amp	1	1
SLC26A8	16q-Amp	1	1
SLC26A8	20q-Amp	1	1
SLC26A8	6p-Amp	1	1
SLC26A8	9p-Amp	1	1
SLC26A8	14q-Del	1	1
SLC26A8	15q-Del	1	1
SLC26A8	18q-Del	1	1
SLC26A8	1p-Del	1	1
SLC26A8	20p-Del	1	1
SLC26A8	22q-Del	1	1
SLC26A8	4p-Del	1	1
SLC26A8	4q-Del	1	1
SLC26A8	5q-Del	1	1
SLC26A8	Amp_1q31.1	1	1
SLC26A8	Amp_5p12	1	1
SLC26A8	Amp_6p21.1	1	1
SLC26A8	Amp_10q22.3	1	1
SLC26A8	Amp_11p15.5	1	1
SLC26A8	Amp_13q12.13	1	1
SLC26A8	Amp_15q26.1	1	1
SLC26A8	Amp_16p11.2	1	1
SLC26A8	Amp_20q11.21	1	1
SLC26A8	Amp_20q12	1	1
SLC26A8	Amp_20q13.12	1	1
SLC26A8	Del_1p13.2	1	1
SLC26A8	Del_2p12	1	1
SLC26A8	Del_2q22.1	1	1
SLC26A8	Del_3p26.3	1	1
SLC26A8	Del_3q26.31	1	1
SLC26A8	Del_4p16.1	1	1
SLC26A8	Del_4q35.1	1	1
SLC26A8	Del_5q21.2	1	1
SLC26A8	Del_5q22.2	1	1
SLC26A8	Del_5q23.3	1	1
SLC26A8	Del_6q26	1	1
SLC26A8	Del_8q11.1	1	1
SLC26A8	Del_10q23.31	1	1
SLC26A8	Del_12p13.1	1	1
SLC26A8	Del_14q11.2	1	1
SLC26A8	Del_15q22.33	1	1
SLC26A8	Del_16p13.3	1	1
SLC26A8	Del_17p12	1	1
SLC26A8	Del_17q24.3	1	1
SLC26A8	Del_18q12.2	1	1
SLC26A8	Del_18q21.2	1	1
SLC26A8	Del_18q22.1	1	1
SLC26A8	Del_19p13.3	1	1
SLC26A8	Del_22q13.32	1	1
RBBP7	C14orf184	1	1
RBBP7	PRPS1	1	1
RBBP7	16p-Amp	1	1
RBBP7	16q-Amp	1	1
RBBP7	17q-Amp	1	1
RBBP7	20q-Amp	1	1
RBBP7	2p-Amp	1	1
RBBP7	2q-Amp	1	1
RBBP7	6p-Amp	1	1
RBBP7	7q-Amp	1	1
RBBP7	9p-Amp	1	1
RBBP7	15q-Del	1	1
RBBP7	1p-Del	1	1
RBBP7	20p-Del	1	1
RBBP7	5q-Del	1	1
RBBP7	Amp_2q33.1	1	1
RBBP7	Amp_5p12	1	1
RBBP7	Amp_6p21.1	1	1
RBBP7	Amp_15q26.1	1	1
RBBP7	Amp_17q12	1	1
RBBP7	Amp_19q12	1	1
RBBP7	Amp_20q12	1	1
RBBP7	Amp_20q13.12	1	1
RBBP7	Del_1p36.11	1	1
RBBP7	Del_1p33	1	1
RBBP7	Del_2p12	1	1
RBBP7	Del_2q22.1	1	1
RBBP7	Del_5q12.1	1	1
RBBP7	Del_5q21.2	1	1
RBBP7	Del_5q22.2	1	1
RBBP7	Del_5q23.3	1	1
RBBP7	Del_7q31.1	1	1
RBBP7	Del_8q11.1	1	1
RBBP7	Del_12p13.1	1	1
RBBP7	Del_16p13.3	1	1
RB1	Amp_15q26.1	1	1
RB1	Amp_20q13.12	1	1
RB1	Del_2p12	1	1
RB1	Del_8q11.1	1	1
RB1	Del_18q21.2	1	1
L1TD1	C14orf184	1	1
L1TD1	IDH1	1	1
L1TD1	16p-Amp	1	1
L1TD1	16q-Amp	1	1
L1TD1	17q-Amp	1	1
L1TD1	20q-Amp	1	1
L1TD1	2p-Amp	1	1
L1TD1	2q-Amp	1	1
L1TD1	6p-Amp	1	1
L1TD1	7p-Amp	1	1
L1TD1	7q-Amp	1	1
L1TD1	9p-Amp	1	1
L1TD1	14q-Del	1	1
L1TD1	15q-Del	1	1
L1TD1	22q-Del	1	1
L1TD1	4p-Del	1	1
L1TD1	4q-Del	1	1
L1TD1	5q-Del	1	1
L1TD1	Amp_1q31.1	1	1
L1TD1	Amp_2q33.1	1	1
L1TD1	Amp_5p12	1	1
L1TD1	Amp_6p21.1	1	1
L1TD1	Amp_10q22.3	1	1
L1TD1	Amp_13q12.2	1	1
L1TD1	Amp_15q26.1	1	1
L1TD1	Amp_16p11.2	1	1
L1TD1	Amp_19q12	1	1
L1TD1	Amp_20p11.21	1	1
L1TD1	Amp_20q11.21	1	1
L1TD1	Amp_20q12	1	1
L1TD1	Amp_20q13.12	1	1
L1TD1	Del_2p12	1	1
L1TD1	Del_3p26.3	1	1
L1TD1	Del_3q26.31	1	1
L1TD1	Del_4p16.1	1	1
L1TD1	Del_5q12.1	1	1
L1TD1	Del_5q22.2	1	1
L1TD1	Del_5q23.3	1	1
L1TD1	Del_8q11.1	1	1
L1TD1	Del_10q21.1	1	1
L1TD1	Del_10q23.31	1	1
L1TD1	Del_12p13.1	1	1
L1TD1	Del_14q11.2	1	1
L1TD1	Del_15q11.2	1	1
L1TD1	Del_15q15.2	1	1
L1TD1	Del_15q21.1	1	1
L1TD1	Del_15q22.33	1	1
L1TD1	Del_16p13.3	1	1
L1TD1	Del_17q24.3	1	1
L1TD1	Del_19p13.3	1	1
TOP2B	C14orf184	1	1
TOP2B	17q-Amp	1	1
TOP2B	2p-Amp	1	1
TOP2B	2q-Amp	1	1
TOP2B	6p-Amp	1	1
TOP2B	1p-Del	1	1
TOP2B	4p-Del	1	1
TOP2B	4q-Del	1	1
TOP2B	Amp_6p21.1	1	1
TOP2B	Amp_15q26.1	1	1
TOP2B	Amp_17q12	1	1
TOP2B	Amp_17q24.1	1	1
TOP2B	Amp_19q12	1	1
TOP2B	Del_1p13.2	1	1
TOP2B	Del_2p12	1	1
TOP2B	Del_2q22.1	1	1
TOP2B	Del_3p26.3	1	1
TOP2B	Del_3p14.2	1	1
TOP2B	Del_6q26	1	1
TOP2B	Del_8q11.1	1	1
TOP2B	Del_16p13.3	1	1
TOP2B	Del_17q24.3	1	1
TOP2B	Del_18q12.2	1	1
TOP2B	Del_18q21.2	1	1
DCLK2	C14orf184	1	1
DCLK2	GMNN	1	1
DCLK2	17q-Amp	1	1
DCLK2	2p-Amp	1	1
DCLK2	2q-Amp	1	1
DCLK2	6p-Amp	1	1
DCLK2	9p-Amp	1	1
DCLK2	1p-Del	1	1
DCLK2	20p-Del	1	1
DCLK2	5q-Del	1	1
DCLK2	Amp_1q31.1	1	1
DCLK2	Amp_5p12	1	1
DCLK2	Amp_6p21.1	1	1
DCLK2	Amp_10q22.3	1	1
DCLK2	Amp_15q26.1	1	1
DCLK2	Amp_17q24.1	1	1
DCLK2	Del_2p12	1	1
DCLK2	Del_2q22.1	1	1
DCLK2	Del_3p26.3	1	1
DCLK2	Del_3q26.31	1	1
DCLK2	Del_5q12.1	1	1
DCLK2	Del_5q21.2	1	1
DCLK2	Del_5q22.2	1	1
DCLK2	Del_5q23.3	1	1
DCLK2	Del_6q26	1	1
DCLK2	Del_8q11.1	1	1
DCLK2	Del_10q23.31	1	1
DCLK2	Del_10q25.2	1	1
DCLK2	Del_12p13.1	1	1
DCLK2	Del_16p13.3	1	1
DCLK2	Del_16q23.1	1	1
DCLK2	Del_17q24.3	1	1
DCLK2	Del_19p13.3	1	1
FKBP9	C14orf184	1	1
FKBP9	12p-Amp	1	1
FKBP9	12q-Amp	1	1
FKBP9	16p-Amp	1	1
FKBP9	16q-Amp	1	1
FKBP9	17q-Amp	1	1
FKBP9	20p-Amp	1	1
FKBP9	20q-Amp	1	1
FKBP9	2p-Amp	1	1
FKBP9	2q-Amp	1	1
FKBP9	6p-Amp	1	1
FKBP9	7q-Amp	1	1
FKBP9	9p-Amp	1	1
FKBP9	14q-Del	1	1
FKBP9	18q-Del	1	1
FKBP9	1p-Del	1	1
FKBP9	20p-Del	1	1
FKBP9	21q-Del	1	1
FKBP9	22q-Del	1	1
FKBP9	4q-Del	1	1
FKBP9	5q-Del	1	1
FKBP9	Amp_2q33.1	1	1
FKBP9	Amp_5p12	1	1
FKBP9	Amp_6p21.1	1	1
FKBP9	Amp_11p15.5	1	1
FKBP9	Amp_15q26.1	1	1
FKBP9	Amp_16p11.2	1	1
FKBP9	Amp_17q12	1	1
FKBP9	Amp_17q24.1	1	1
FKBP9	Amp_19q12	1	1
FKBP9	Amp_20q11.21	1	1
FKBP9	Amp_20q12	1	1
FKBP9	Amp_20q13.12	1	1
FKBP9	Del_1p33	1	1
FKBP9	Del_2p12	1	1
FKBP9	Del_3p26.3	1	1
FKBP9	Del_4q22.1	1	1
FKBP9	Del_5q12.1	1	1
FKBP9	Del_6q26	1	1
FKBP9	Del_7q31.1	1	1
FKBP9	Del_8q11.1	1	1
FKBP9	Del_10q23.31	1	1
FKBP9	Del_10q25.2	1	1
FKBP9	Del_12p13.1	1	1
FKBP9	Del_14q11.2	1	1
FKBP9	Del_18q12.2	1	1
FKBP9	Del_18q21.2	1	1
FKBP9	Del_18q22.1	1	1
FKBP9	Del_19p13.3	1	1
FKBP9	Del_21q11.2	1	1
FKBP9	Del_21q21.1	1	1
FKBP9	Del_22q13.32	1	1
PTEN	Del_2p12	1	1
C14orf184	HLA-A	1	1
C14orf184	FYN	1	1
C14orf184	GPATCH8	1	1
C14orf184	MAP4K3	1	1
C14orf184	SLC12A6	1	1
C14orf184	CDK12	1	1
C14orf184	NEXN	1	1
C14orf184	PRPS1	1	1
C14orf184	PTGDR	1	1
C14orf184	BIRC3	1	1
C14orf184	HIST1H1T	1	1
C14orf184	ZNF486	1	1
C14orf184	GMNN	1	1
C14orf184	12q-Amp	1	1
C14orf184	17q-Amp	1	1
C14orf184	2q-Amp	1	1
C14orf184	14q-Del	1	1
C14orf184	15q-Del	1	1
C14orf184	1p-Del	1	1
C14orf184	21q-Del	1	1
C14orf184	4p-Del	1	1
C14orf184	4q-Del	1	1
C14orf184	5q-Del	1	1
C14orf184	Amp_1q31.1	1	1
C14orf184	Amp_2q33.1	1	1
C14orf184	Amp_5p12	1	1
C14orf184	Amp_11p15.5	1	1
C14orf184	Amp_15q26.1	1	1
C14orf184	Amp_17q24.1	1	1
C14orf184	Amp_19q12	1	1
C14orf184	Del_1p13.2	1	1
C14orf184	Del_2p12	1	1
C14orf184	Del_2q22.1	1	1
C14orf184	Del_3p26.3	1	1
C14orf184	Del_4p16.1	1	1
C14orf184	Del_4q22.1	1	1
C14orf184	Del_5q12.1	1	1
C14orf184	Del_5q23.3	1	1
C14orf184	Del_7q31.1	1	1
C14orf184	Del_8q11.1	1	1
C14orf184	Del_10q21.1	1	1
C14orf184	Del_10q25.2	1	1
C14orf184	Del_12p13.1	1	1
C14orf184	Del_14q11.2	1	1
C14orf184	Del_15q11.2	1	1
C14orf184	Del_15q15.2	1	1
C14orf184	Del_15q21.1	1	1
C14orf184	Del_15q22.33	1	1
C14orf184	Del_16p13.3	1	1
C14orf184	Del_16q23.1	1	1
C14orf184	Del_17q24.3	1	1
C14orf184	Del_19p13.3	1	1
C14orf184	Del_21q11.2	1	1
C14orf184	Del_21q21.1	1	1
HLA-A	HIST1H1T	1	1
HLA-A	GMNN	1	1
HLA-A	12p-Amp	1	1
HLA-A	12q-Amp	1	1
HLA-A	16p-Amp	1	1
HLA-A	16q-Amp	1	1
HLA-A	17q-Amp	1	1
HLA-A	20p-Amp	1	1
HLA-A	20q-Amp	1	1
HLA-A	2p-Amp	1	1
HLA-A	2q-Amp	1	1
HLA-A	6p-Amp	1	1
HLA-A	8p-Amp	1	1
HLA-A	9p-Amp	1	1
HLA-A	14q-Del	1	1
HLA-A	15q-Del	1	1
HLA-A	18p-Del	1	1
HLA-A	1p-Del	1	1
HLA-A	20p-Del	1	1
HLA-A	5q-Del	1	1
HLA-A	Amp_1q31.1	1	1
HLA-A	Amp_2q33.1	1	1
HLA-A	Amp_6p21.1	1	1
HLA-A	Amp_8p11.23	1	1
HLA-A	Amp_10q22.3	1	1
HLA-A	Amp_11p15.5	1	1
HLA-A	Amp_15q26.1	1	1
HLA-A	Amp_16p11.2	1	1
HLA-A	Amp_17q12	1	1
HLA-A	Amp_17q24.1	1	1
HLA-A	Amp_19q12	1	1
HLA-A	Amp_20p12.1	1	1
HLA-A	Amp_20p11.21	1	1
HLA-A	Amp_20q11.21	1	1
HLA-A	Amp_20q12	1	1
HLA-A	Amp_20q13.12	1	1
HLA-A	Del_1p33	1	1
HLA-A	Del_1p13.2	1	1
HLA-A	Del_2p12	1	1
HLA-A	Del_2q22.1	1	1
HLA-A	Del_5q12.1	1	1
HLA-A	Del_5q21.2	1	1
HLA-A	Del_5q23.3	1	1
HLA-A	Del_6p25.3	1	1
HLA-A	Del_6q26	1	1
HLA-A	Del_7q31.1	1	1
HLA-A	Del_8q11.1	1	1
HLA-A	Del_14q11.2	1	1
HLA-A	Del_15q11.2	1	1
HLA-A	Del_15q15.2	1	1
HLA-A	Del_15q21.1	1	1
HLA-A	Del_15q22.33	1	1
HLA-A	Del_16p13.3	1	1
HLA-A	Del_18p11.31	1	1
BMPR2	GMNN	1	1
BMPR2	13q-Amp	1	1
BMPR2	16p-Amp	1	1
BMPR2	16q-Amp	1	1
BMPR2	17q-Amp	1	1
BMPR2	20p-Amp	1	1
BMPR2	20q-Amp	1	1
BMPR2	2p-Amp	1	1
BMPR2	2q-Amp	1	1
BMPR2	14q-Del	1	1
BMPR2	15q-Del	1	1
BMPR2	17p-Del	1	1
BMPR2	18p-Del	1	1
BMPR2	18q-Del	1	1
BMPR2	22q-Del	1	1
BMPR2	4q-Del	1	1
BMPR2	5q-Del	1	1
BMPR2	Amp_2q33.1	1	1
BMPR2	Amp_10q22.3	1	1
BMPR2	Amp_11p15.5	1	1
BMPR2	Amp_13q12.13	1	1
BMPR2	Amp_13q12.2	1	1
BMPR2	Amp_13q22.1	1	1
BMPR2	Amp_15q26.1	1	1
BMPR2	Amp_16p11.2	1	1
BMPR2	Amp_17q12	1	1
BMPR2	Amp_17q24.1	1	1
BMPR2	Amp_20p12.1	1	1
BMPR2	Amp_20p11.21	1	1
BMPR2	Amp_20q11.21	1	1
BMPR2	Amp_20q12	1	1
BMPR2	Amp_20q13.12	1	1
BMPR2	Del_2p12	1	1
BMPR2	Del_2q22.1	1	1
BMPR2	Del_3p26.3	1	1
BMPR2	Del_3q26.31	1	1
BMPR2	Del_6q26	1	1
BMPR2	Del_7q31.1	1	1
BMPR2	Del_8p22	1	1
BMPR2	Del_10q21.1	1	1
BMPR2	Del_14q11.2	1	1
BMPR2	Del_15q11.2	1	1
BMPR2	Del_15q15.2	1	1
BMPR2	Del_17p12	1	1
BMPR2	Del_17q24.3	1	1
BMPR2	Del_18p11.31	1	1
BMPR2	Del_18q12.2	1	1
BMPR2	Del_18q21.2	1	1
BMPR2	Del_18q22.1	1	1
BMPR2	Del_19p13.3	1	1
FYN	PRPS1	1	1
FYN	IDH1	1	1
FYN	16p-Amp	1	1
FYN	16q-Amp	1	1
FYN	17q-Amp	1	1
FYN	2p-Amp	1	1
FYN	2q-Amp	1	1
FYN	6p-Amp	1	1
FYN	8p-Amp	1	1
FYN	9p-Amp	1	1
FYN	1p-Del	1	1
FYN	4p-Del	1	1
FYN	4q-Del	1	1
FYN	5q-Del	1	1
FYN	Amp_1q31.1	1	1
FYN	Amp_2q33.1	1	1
FYN	Amp_5p12	1	1
FYN	Amp_8p11.23	1	1
FYN	Amp_10q22.3	1	1
FYN	Amp_15q26.1	1	1
FYN	Amp_16p11.2	1	1
FYN	Amp_17q24.1	1	1
FYN	Amp_19q12	1	1
FYN	Del_1p33	1	1
FYN	Del_2p12	1	1
FYN	Del_2q22.1	1	1
FYN	Del_3q26.31	1	1
FYN	Del_4q22.1	1	1
FYN	Del_4q35.1	1	1
FYN	Del_5q12.1	1	1
FYN	Del_5q22.2	1	1
FYN	Del_5q23.3	1	1
FYN	Del_6p25.3	1	1
FYN	Del_6q26	1	1
FYN	Del_8q11.1	1	1
FYN	Del_12p13.1	1	1
FYN	Del_16p13.3	1	1
FYN	Del_16q23.1	1	1
FYN	Del_17q24.3	1	1
FYN	Del_19p13.3	1	1
ALDH1A3	GMNN	1	1
ALDH1A3	13q-Amp	1	1
ALDH1A3	16p-Amp	1	1
ALDH1A3	16q-Amp	1	1
ALDH1A3	17q-Amp	1	1
ALDH1A3	2p-Amp	1	1
ALDH1A3	2q-Amp	1	1
ALDH1A3	14q-Del	1	1
ALDH1A3	15q-Del	1	1
ALDH1A3	18p-Del	1	1
ALDH1A3	18q-Del	1	1
ALDH1A3	22q-Del	1	1
ALDH1A3	4p-Del	1	1
ALDH1A3	4q-Del	1	1
ALDH1A3	5q-Del	1	1
ALDH1A3	Amp_1q31.1	1	1
ALDH1A3	Amp_2q33.1	1	1
ALDH1A3	Amp_10q22.3	1	1
ALDH1A3	Amp_11p15.5	1	1
ALDH1A3	Amp_13q12.13	1	1
ALDH1A3	Amp_13q12.2	1	1
ALDH1A3	Amp_13q22.1	1	1
ALDH1A3	Amp_15q26.1	1	1
ALDH1A3	Amp_16p11.2	1	1
ALDH1A3	Amp_17q12	1	1
ALDH1A3	Amp_17q24.1	1	1
ALDH1A3	Amp_19q12	1	1
ALDH1A3	Del_2p12	1	1
ALDH1A3	Del_2q22.1	1	1
ALDH1A3	Del_3p26.3	1	1
ALDH1A3	Del_3q26.31	1	1
ALDH1A3	Del_4p16.1	1	1
ALDH1A3	Del_4q35.1	1	1
ALDH1A3	Del_5q12.1	1	1
ALDH1A3	Del_10q21.1	1	1
ALDH1A3	Del_10q23.31	1	1
ALDH1A3	Del_10q25.2	1	1
ALDH1A3	Del_12p13.1	1	1
ALDH1A3	Del_14q11.2	1	1
ALDH1A3	Del_15q11.2	1	1
ALDH1A3	Del_15q15.2	1	1
ALDH1A3	Del_15q21.1	1	1
ALDH1A3	Del_17p12	1	1
ALDH1A3	Del_17q24.3	1	1
ALDH1A3	Del_18p11.31	1	1
ALDH1A3	Del_18q21.2	1	1
ALDH1A3	Del_18q22.1	1	1
ALDH1A3	Del_19p13.3	1	1
LARP4B	GMNN	1	1
LARP4B	13q-Amp	1	1
LARP4B	17q-Amp	1	1
LARP4B	20q-Amp	1	1
LARP4B	2p-Amp	1	1
LARP4B	2q-Amp	1	1
LARP4B	6p-Amp	1	1
LARP4B	9p-Amp	1	1
LARP4B	17p-Del	1	1
LARP4B	18p-Del	1	1
LARP4B	18q-Del	1	1
LARP4B	1p-Del	1	1
LARP4B	21q-Del	1	1
LARP4B	4q-Del	1	1
LARP4B	5q-Del	1	1
LARP4B	Amp_2q33.1	1	1
LARP4B	Amp_6p21.1	1	1
LARP4B	Amp_11p15.5	1	1
LARP4B	Amp_13q12.13	1	1
LARP4B	Amp_13q12.2	1	1
LARP4B	Amp_13q22.1	1	1
LARP4B	Amp_15q26.1	1	1
LARP4B	Amp_17q24.1	1	1
LARP4B	Amp_20q11.21	1	1
LARP4B	Amp_20q12	1	1
LARP4B	Amp_20q13.12	1	1
LARP4B	Del_2p12	1	1
LARP4B	Del_2q22.1	1	1
LARP4B	Del_3p26.3	1	1
LARP4B	Del_4q22.1	1	1
LARP4B	Del_4q35.1	1	1
LARP4B	Del_5q12.1	1	1
LARP4B	Del_5q21.2	1	1
LARP4B	Del_5q23.3	1	1
LARP4B	Del_8p23.2	1	1
LARP4B	Del_8q11.1	1	1
LARP4B	Del_17p12	1	1
LARP4B	Del_17q24.3	1	1
LARP4B	Del_18p11.31	1	1
LARP4B	Del_18q12.2	1	1
LARP4B	Del_18q21.2	1	1
LARP4B	Del_18q22.1	1	1
LARP4B	Del_19p13.3	1	1
LARP4B	Del_21q11.2	1	1
LARP4B	Del_21q21.1	1	1
BCORL1	12p-Amp	1	1
BCORL1	12q-Amp	1	1
BCORL1	17q-Amp	1	1
BCORL1	20q-Amp	1	1
BCORL1	2q-Amp	1	1
BCORL1	1p-Del	1	1
BCORL1	20p-Del	1	1
BCORL1	5q-Del	1	1
BCORL1	Amp_2q33.1	1	1
BCORL1	Amp_12p13.33	1	1
BCORL1	Amp_17q12	1	1
BCORL1	Amp_17q24.1	1	1
BCORL1	Amp_19q12	1	1
BCORL1	Amp_20q11.21	1	1
BCORL1	Amp_20q12	1	1
BCORL1	Amp_20q13.12	1	1
BCORL1	Del_2p12	1	1
BCORL1	Del_3p26.3	1	1
BCORL1	Del_4p16.1	1	1
BCORL1	Del_6q26	1	1
BCORL1	Del_7q31.1	1	1
BCORL1	Del_8q11.1	1	1
BCORL1	Del_10q23.31	1	1
BCORL1	Del_10q25.2	1	1
BCORL1	Del_12p13.1	1	1
BCORL1	Del_16p13.3	1	1
BCORL1	Del_18q21.2	1	1
BCORL1	Del_18q22.1	1	1
BCORL1	Del_19p13.3	1	1
GPATCH8	PTGDR	1	1
GPATCH8	BIRC3	1	1
GPATCH8	HIST1H1T	1	1
GPATCH8	ZNF486	1	1
GPATCH8	GMNN	1	1
GPATCH8	16p-Amp	1	1
GPATCH8	16q-Amp	1	1
GPATCH8	17q-Amp	1	1
GPATCH8	2p-Amp	1	1
GPATCH8	2q-Amp	1	1
GPATCH8	6p-Amp	1	1
GPATCH8	9p-Amp	1	1
GPATCH8	14q-Del	1	1
GPATCH8	15q-Del	1	1
GPATCH8	17p-Del	1	1
GPATCH8	18p-Del	1	1
GPATCH8	18q-Del	1	1
GPATCH8	1p-Del	1	1
GPATCH8	20p-Del	1	1
GPATCH8	22q-Del	1	1
GPATCH8	5q-Del	1	1
GPATCH8	Amp_1q31.1	1	1
GPATCH8	Amp_2q33.1	1	1
GPATCH8	Amp_6p21.1	1	1
GPATCH8	Amp_10q22.3	1	1
GPATCH8	Amp_11p15.5	1	1
GPATCH8	Amp_13q12.13	1	1
GPATCH8	Amp_13q12.2	1	1
GPATCH8	Amp_13q22.1	1	1
GPATCH8	Amp_15q26.1	1	1
GPATCH8	Amp_16p11.2	1	1
GPATCH8	Amp_17q12	1	1
GPATCH8	Amp_17q24.1	1	1
GPATCH8	Amp_20q11.21	1	1
GPATCH8	Amp_20q12	1	1
GPATCH8	Amp_20q13.12	1	1
GPATCH8	Del_1p36.11	1	1
GPATCH8	Del_1p33	1	1
GPATCH8	Del_1p13.2	1	1
GPATCH8	Del_2p12	1	1
GPATCH8	Del_3p26.3	1	1
GPATCH8	Del_3p14.2	1	1
GPATCH8	Del_4p16.1	1	1
GPATCH8	Del_4q22.1	1	1
GPATCH8	Del_5q12.1	1	1
GPATCH8	Del_5q21.2	1	1
GPATCH8	Del_5q23.3	1	1
GPATCH8	Del_6p25.3	1	1
GPATCH8	Del_6q26	1	1
GPATCH8	Del_7q31.1	1	1
GPATCH8	Del_8q11.1	1	1
GPATCH8	Del_10q21.1	1	1
GPATCH8	Del_10q23.31	1	1
GPATCH8	Del_10q25.2	1	1
GPATCH8	Del_14q11.2	1	1
GPATCH8	Del_15q11.2	1	1
GPATCH8	Del_15q15.2	1	1
GPATCH8	Del_15q21.1	1	1
GPATCH8	Del_15q22.33	1	1
GPATCH8	Del_16p13.3	1	1
GPATCH8	Del_17p12	1	1
GPATCH8	Del_17q24.3	1	1
GPATCH8	Del_18p11.31	1	1
GPATCH8	Del_18q12.2	1	1
GPATCH8	Del_18q21.2	1	1
GPATCH8	Del_18q22.1	1	1
GPATCH8	Del_19p13.3	1	1
GPATCH8	Del_22q13.32	1	1
MAP4K3	PRPS1	1	1
MAP4K3	PTGDR	1	1
MAP4K3	12p-Amp	1	1
MAP4K3	12q-Amp	1	1
MAP4K3	16p-Amp	1	1
MAP4K3	16q-Amp	1	1
MAP4K3	17q-Amp	1	1
MAP4K3	20q-Amp	1	1
MAP4K3	2p-Amp	1	1
MAP4K3	2q-Amp	1	1
MAP4K3	6p-Amp	1	1
MAP4K3	9p-Amp	1	1
MAP4K3	14q-Del	1	1
MAP4K3	15q-Del	1	1
MAP4K3	1p-Del	1	1
MAP4K3	20p-Del	1	1
MAP4K3	4q-Del	1	1
MAP4K3	5q-Del	1	1
MAP4K3	Amp_1q31.1	1	1
MAP4K3	Amp_5p12	1	1
MAP4K3	Amp_6p21.1	1	1
MAP4K3	Amp_10q22.3	1	1
MAP4K3	Amp_12p13.33	1	1
MAP4K3	Amp_15q26.1	1	1
MAP4K3	Amp_16p11.2	1	1
MAP4K3	Amp_17q12	1	1
MAP4K3	Amp_17q24.1	1	1
MAP4K3	Amp_19q12	1	1
MAP4K3	Amp_20p11.21	1	1
MAP4K3	Amp_20q11.21	1	1
MAP4K3	Amp_20q12	1	1
MAP4K3	Amp_20q13.12	1	1
MAP4K3	Del_1p33	1	1
MAP4K3	Del_1p13.2	1	1
MAP4K3	Del_2p12	1	1
MAP4K3	Del_3p26.3	1	1
MAP4K3	Del_4q35.1	1	1
MAP4K3	Del_5q12.1	1	1
MAP4K3	Del_6q26	1	1
MAP4K3	Del_7q31.1	1	1
MAP4K3	Del_8q11.1	1	1
MAP4K3	Del_10q23.31	1	1
MAP4K3	Del_10q25.2	1	1
MAP4K3	Del_15q11.2	1	1
MAP4K3	Del_15q15.2	1	1
MAP4K3	Del_15q21.1	1	1
MAP4K3	Del_15q22.33	1	1
MAP4K3	Del_16p13.3	1	1
MAP4K3	Del_21q21.1	1	1
SETD2	PRPS1	1	1
SETD2	17q-Amp	1	1
SETD2	20p-Amp	1	1
SETD2	20q-Amp	1	1
SETD2	2p-Amp	1	1
SETD2	2q-Amp	1	1
SETD2	18q-Del	1	1
SETD2	Amp_5p12	1	1
SETD2	Amp_10q22.3	1	1
SETD2	Amp_15q26.1	1	1
SETD2	Amp_20p12.1	1	1
SETD2	Amp_20p11.21	1	1
SETD2	Amp_20q11.21	1	1
SETD2	Amp_20q12	1	1
SETD2	Amp_20q13.12	1	1
SETD2	Del_2p12	1	1
SETD2	Del_2q22.1	1	1
SETD2	Del_3p26.3	1	1
SETD2	Del_12p13.1	1	1
SETD2	Del_16p13.3	1	1
SETD2	Del_18q12.2	1	1
SETD2	Del_18q21.2	1	1
SETD2	Del_18q22.1	1	1
SETD2	Del_19p13.3	1	1
SLC12A6	HIST1H1T	1	1
SLC12A6	16p-Amp	1	1
SLC12A6	16q-Amp	1	1
SLC12A6	17q-Amp	1	1
SLC12A6	20q-Amp	1	1
SLC12A6	2p-Amp	1	1
SLC12A6	2q-Amp	1	1
SLC12A6	6p-Amp	1	1
SLC12A6	14q-Del	1	1
SLC12A6	15q-Del	1	1
SLC12A6	1p-Del	1	1
SLC12A6	20p-Del	1	1
SLC12A6	5q-Del	1	1
SLC12A6	Amp_2q33.1	1	1
SLC12A6	Amp_10q22.3	1	1
SLC12A6	Amp_15q26.1	1	1
SLC12A6	Amp_17q12	1	1
SLC12A6	Amp_17q24.1	1	1
SLC12A6	Amp_19q12	1	1
SLC12A6	Amp_20q11.21	1	1
SLC12A6	Amp_20q12	1	1
SLC12A6	Amp_20q13.12	1	1
SLC12A6	Del_1p13.2	1	1
SLC12A6	Del_2p12	1	1
SLC12A6	Del_5q12.1	1	1
SLC12A6	Del_7q31.1	1	1
SLC12A6	Del_8p22	1	1
SLC12A6	Del_8q11.1	1	1
SLC12A6	Del_15q11.2	1	1
SLC12A6	Del_15q15.2	1	1
SLC12A6	Del_15q21.1	1	1
SLC12A6	Del_15q22.33	1	1
SLC12A6	Del_16p13.3	1	1
SLC12A6	Del_18q21.2	1	1
SLC12A6	Del_18q22.1	1	1
CDK12	PTGDR	1	1
CDK12	IDH1	1	1
CDK12	17q-Amp	1	1
CDK12	2p-Amp	1	1
CDK12	2q-Amp	1	1
CDK12	6p-Amp	1	1
CDK12	1p-Del	1	1
CDK12	5q-Del	1	1
CDK12	Amp_2q33.1	1	1
CDK12	Amp_5p12	1	1
CDK12	Amp_6p21.1	1	1
CDK12	Amp_10q22.3	1	1
CDK12	Amp_11p15.5	1	1
CDK12	Amp_15q26.1	1	1
CDK12	Amp_17q12	1	1
CDK12	Amp_17q24.1	1	1
CDK12	Amp_19q12	1	1
CDK12	Del_1p36.11	1	1
CDK12	Del_1p33	1	1
CDK12	Del_1p13.2	1	1
CDK12	Del_2p12	1	1
CDK12	Del_2q22.1	1	1
CDK12	Del_5q12.1	1	1
CDK12	Del_5q21.2	1	1
CDK12	Del_5q23.3	1	1
CDK12	Del_6q26	1	1
CDK12	Del_10q21.1	1	1
CDK12	Del_10q23.31	1	1
CDK12	Del_17q24.3	1	1
CDK12	Del_19p13.3	1	1
NEXN	PRPS1	1	1
NEXN	IDH1	1	1
NEXN	16p-Amp	1	1
NEXN	16q-Amp	1	1
NEXN	17q-Amp	1	1
NEXN	2p-Amp	1	1
NEXN	2q-Amp	1	1
NEXN	8p-Amp	1	1
NEXN	15q-Del	1	1
NEXN	1p-Del	1	1
NEXN	20p-Del	1	1
NEXN	4q-Del	1	1
NEXN	Amp_2q33.1	1	1
NEXN	Amp_5p12	1	1
NEXN	Amp_11p15.5	1	1
NEXN	Amp_19q12	1	1
NEXN	Del_1p33	1	1
NEXN	Del_1p13.2	1	1
NEXN	Del_2p12	1	1
NEXN	Del_2q22.1	1	1
NEXN	Del_3p26.3	1	1
NEXN	Del_3q26.31	1	1
NEXN	Del_4q35.1	1	1
NEXN	Del_6p25.3	1	1
NEXN	Del_6q26	1	1
NEXN	Del_7q31.1	1	1
NEXN	Del_8q11.1	1	1
NEXN	Del_10q21.1	1	1
NEXN	Del_10q25.2	1	1
NEXN	Del_16p13.3	1	1
NEXN	Del_17q24.3	1	1
GMPS	16p-Amp	1	1
GMPS	16q-Amp	1	1
GMPS	17q-Amp	1	1
GMPS	2p-Amp	1	1
GMPS	2q-Amp	1	1
GMPS	6p-Amp	1	1
GMPS	9p-Amp	1	1
GMPS	14q-Del	1	1
GMPS	15q-Del	1	1
GMPS	17p-Del	1	1
GMPS	1p-Del	1	1
GMPS	20p-Del	1	1
GMPS	21q-Del	1	1
GMPS	22q-Del	1	1
GMPS	4p-Del	1	1
GMPS	4q-Del	1	1
GMPS	5q-Del	1	1
GMPS	Amp_1q31.1	1	1
GMPS	Amp_2q33.1	1	1
GMPS	Amp_5p12	1	1
GMPS	Amp_6p21.1	1	1
GMPS	Amp_10q22.3	1	1
GMPS	Amp_11p15.5	1	1
GMPS	Amp_15q26.1	1	1
GMPS	Amp_16p11.2	1	1
GMPS	Amp_17q24.1	1	1
GMPS	Amp_19q12	1	1
GMPS	Del_1p36.11	1	1
GMPS	Del_1p13.2	1	1
GMPS	Del_2p12	1	1
GMPS	Del_2q22.1	1	1
GMPS	Del_3p26.3	1	1
GMPS	Del_3q26.31	1	1
GMPS	Del_4p16.1	1	1
GMPS	Del_4q22.1	1	1
GMPS	Del_4q35.1	1	1
GMPS	Del_5q12.1	1	1
GMPS	Del_5q21.2	1	1
GMPS	Del_5q22.2	1	1
GMPS	Del_5q23.3	1	1
GMPS	Del_6p25.3	1	1
GMPS	Del_6q26	1	1
GMPS	Del_8q11.1	1	1
GMPS	Del_10q21.1	1	1
GMPS	Del_10q23.31	1	1
GMPS	Del_10q25.2	1	1
GMPS	Del_12p13.1	1	1
GMPS	Del_14q11.2	1	1
GMPS	Del_15q11.2	1	1
GMPS	Del_15q21.1	1	1
GMPS	Del_15q22.33	1	1
GMPS	Del_16q23.1	1	1
GMPS	Del_17q24.3	1	1
GMPS	Del_18p11.31	1	1
GMPS	Del_18q12.2	1	1
GMPS	Del_18q21.2	1	1
GMPS	Del_18q22.1	1	1
GMPS	Del_19p13.3	1	1
GMPS	Del_21q11.2	1	1
GMPS	Del_21q21.1	1	1
GMPS	Del_22q13.32	1	1
PRPS1	BIRC3	1	1
PRPS1	HIST1H1T	1	1
PRPS1	ZNF486	1	1
PRPS1	GMNN	1	1
PRPS1	16p-Amp	1	1
PRPS1	16q-Amp	1	1
PRPS1	17q-Amp	1	1
PRPS1	2p-Amp	1	1
PRPS1	2q-Amp	1	1
PRPS1	6p-Amp	1	1
PRPS1	9p-Amp	1	1
PRPS1	17p-Del	1	1
PRPS1	1p-Del	1	1
PRPS1	20p-Del	1	1
PRPS1	22q-Del	1	1
PRPS1	4p-Del	1	1
PRPS1	4q-Del	1	1
PRPS1	Amp_1q31.1	1	1
PRPS1	Amp_2q33.1	1	1
PRPS1	Amp_6p21.1	1	1
PRPS1	Amp_10q22.3	1	1
PRPS1	Amp_11p15.5	1	1
PRPS1	Amp_15q26.1	1	1
PRPS1	Amp_16p11.2	1	1
PRPS1	Amp_17q24.1	1	1
PRPS1	Del_1p36.11	1	1
PRPS1	Del_1p33	1	1
PRPS1	Del_2p12	1	1
PRPS1	Del_2q22.1	1	1
PRPS1	Del_3p26.3	1	1
PRPS1	Del_3p14.2	1	1
PRPS1	Del_3q26.31	1	1
PRPS1	Del_4p16.1	1	1
PRPS1	Del_4q22.1	1	1
PRPS1	Del_6q26	1	1
PRPS1	Del_7q31.1	1	1
PRPS1	Del_8q11.1	1	1
PRPS1	Del_10q21.1	1	1
PRPS1	Del_10q23.31	1	1
PRPS1	Del_10q25.2	1	1
PRPS1	Del_12p13.1	1	1
PRPS1	Del_14q11.2	1	1
PRPS1	Del_17p12	1	1
PRPS1	Del_17q24.3	1	1
PRPS1	Del_19p13.3	1	1
PRPS1	Del_22q13.32	1	1
PTGDR	IDH1	1	1
PTGDR	12p-Amp	1	1
PTGDR	12q-Amp	1	1
PTGDR	16p-Amp	1	1
PTGDR	17q-Amp	1	1
PTGDR	2p-Amp	1	1
PTGDR	2q-Amp	1	1
PTGDR	6p-Amp	1	1
PTGDR	9p-Amp	1	1
PTGDR	14q-Del	1	1
PTGDR	20p-Del	1	1
PTGDR	21q-Del	1	1
PTGDR	4p-Del	1	1
PTGDR	4q-Del	1	1
PTGDR	5q-Del	1	1
PTGDR	Amp_1q31.1	1	1
PTGDR	Amp_2q33.1	1	1
PTGDR	Amp_5p12	1	1
PTGDR	Amp_6p21.1	1	1
PTGDR	Amp_10q22.3	1	1
PTGDR	Amp_11p15.5	1	1
PTGDR	Amp_12p13.33	1	1
PTGDR	Amp_16p11.2	1	1
PTGDR	Amp_17q12	1	1
PTGDR	Amp_17q24.1	1	1
PTGDR	Del_2p12	1	1
PTGDR	Del_2q22.1	1	1
PTGDR	Del_3p26.3	1	1
PTGDR	Del_3p14.2	1	1
PTGDR	Del_3q26.31	1	1
PTGDR	Del_5q12.1	1	1
PTGDR	Del_6p25.3	1	1
PTGDR	Del_6q26	1	1
PTGDR	Del_7q31.1	1	1
PTGDR	Del_8q11.1	1	1
PTGDR	Del_10q23.31	1	1
PTGDR	Del_10q25.2	1	1
PTGDR	Del_12p13.1	1	1
PTGDR	Del_14q11.2	1	1
PTGDR	Del_15q15.2	1	1
PTGDR	Del_15q21.1	1	1
PTGDR	Del_17q24.3	1	1
PTGDR	Del_19p13.3	1	1
PTGDR	Del_21q11.2	1	1
PTGDR	Del_21q21.1	1	1
BIRC3	IDH1	1	1
BIRC3	17q-Amp	1	1
BIRC3	2p-Amp	1	1
BIRC3	2q-Amp	1	1
BIRC3	6p-Amp	1	1
BIRC3	9p-Amp	1	1
BIRC3	1p-Del	1	1
BIRC3	20p-Del	1	1
BIRC3	4q-Del	1	1
BIRC3	5q-Del	1	1
BIRC3	Amp_6p21.1	1	1
BIRC3	Amp_10q22.3	1	1
BIRC3	Amp_11p15.5	1	1
BIRC3	Amp_15q26.1	1	1
BIRC3	Amp_17q12	1	1
BIRC3	Amp_19q12	1	1
BIRC3	Del_1p36.11	1	1
BIRC3	Del_1p33	1	1
BIRC3	Del_2p12	1	1
BIRC3	Del_2q22.1	1	1
BIRC3	Del_6q26	1	1
BIRC3	Del_7q31.1	1	1
BIRC3	Del_8q11.1	1	1
BIRC3	Del_10q21.1	1	1
BIRC3	Del_16p13.3	1	1
BIRC3	Del_19p13.3	1	1
ATM	20p-Amp	1	1
ATM	20q-Amp	1	1
ATM	Amp_20p12.1	1	1
ATM	Amp_20p11.21	1	1
ATM	Amp_20q11.21	1	1
ATM	Amp_20q12	1	1
ATM	Amp_20q13.12	1	1
ATM	Del_17p12	1	1
HIST1H1T	KDM6A	1	1
HIST1H1T	12p-Amp	1	1
HIST1H1T	12q-Amp	1	1
HIST1H1T	16p-Amp	1	1
HIST1H1T	16q-Amp	1	1
HIST1H1T	17q-Amp	1	1
HIST1H1T	2p-Amp	1	1
HIST1H1T	2q-Amp	1	1
HIST1H1T	6p-Amp	1	1
HIST1H1T	9p-Amp	1	1
HIST1H1T	5q-Del	1	1
HIST1H1T	Amp_2q33.1	1	1
HIST1H1T	Amp_5p12	1	1
HIST1H1T	Amp_6p21.1	1	1
HIST1H1T	Amp_10q22.3	1	1
HIST1H1T	Amp_12p13.33	1	1
HIST1H1T	Amp_15q26.1	1	1
HIST1H1T	Amp_16p11.2	1	1
HIST1H1T	Amp_17q12	1	1
HIST1H1T	Amp_19q12	1	1
HIST1H1T	Del_2p12	1	1
HIST1H1T	Del_2q22.1	1	1
HIST1H1T	Del_3p26.3	1	1
HIST1H1T	Del_3q26.31	1	1
HIST1H1T	Del_4p16.1	1	1
HIST1H1T	Del_5q12.1	1	1
HIST1H1T	Del_5q23.3	1	1
HIST1H1T	Del_6q26	1	1
HIST1H1T	Del_7q31.1	1	1
HIST1H1T	Del_10q21.1	1	1
HIST1H1T	Del_10q23.31	1	1
HIST1H1T	Del_10q25.2	1	1
HIST1H1T	Del_12p13.1	1	1
HIST1H1T	Del_17q24.3	1	1
HIST1H1T	Del_19p13.3	1	1
IDH1	GMNN	1	1
IDH1	16p-Amp	1	1
IDH1	16q-Amp	1	1
IDH1	2p-Amp	1	1
IDH1	2q-Amp	1	1
IDH1	6p-Amp	1	1
IDH1	14q-Del	1	1
IDH1	1p-Del	1	1
IDH1	22q-Del	1	1
IDH1	5q-Del	1	1
IDH1	Amp_1q31.1	1	1
IDH1	Amp_2q33.1	1	1
IDH1	Amp_6p21.1	1	1
IDH1	Amp_10q22.3	1	1
IDH1	Amp_15q26.1	1	1
IDH1	Amp_16p11.2	1	1
IDH1	Amp_19q12	1	1
IDH1	Del_2p12	1	1
IDH1	Del_2q22.1	1	1
IDH1	Del_3q26.31	1	1
IDH1	Del_5q12.1	1	1
IDH1	Del_5q23.3	1	1
IDH1	Del_6p25.3	1	1
IDH1	Del_6q26	1	1
IDH1	Del_7q31.1	1	1
IDH1	Del_10q21.1	1	1
IDH1	Del_10q23.31	1	1
IDH1	Del_12p13.1	1	1
IDH1	Del_16p13.3	1	1
IDH1	Del_17q24.3	1	1
IDH1	Del_19p13.3	1	1
IDH1	Del_22q13.32	1	1
ZNF486	GMNN	1	1
ZNF486	KDM6A	1	1
ZNF486	17q-Amp	1	1
ZNF486	2p-Amp	1	1
ZNF486	2q-Amp	1	1
ZNF486	6p-Amp	1	1
ZNF486	7q-Amp	1	1
ZNF486	15q-Del	1	1
ZNF486	1p-Del	1	1
ZNF486	20p-Del	1	1
ZNF486	21q-Del	1	1
ZNF486	22q-Del	1	1
ZNF486	4p-Del	1	1
ZNF486	4q-Del	1	1
ZNF486	Amp_6p21.1	1	1
ZNF486	Amp_11p15.5	1	1
ZNF486	Amp_15q26.1	1	1
ZNF486	Amp_17q12	1	1
ZNF486	Amp_17q24.1	1	1
ZNF486	Amp_19q12	1	1
ZNF486	Del_1p36.11	1	1
ZNF486	Del_1p33	1	1
ZNF486	Del_1p13.2	1	1
ZNF486	Del_2p12	1	1
ZNF486	Del_2q22.1	1	1
ZNF486	Del_3p26.3	1	1
ZNF486	Del_3p14.2	1	1
ZNF486	Del_4q35.1	1	1
ZNF486	Del_6q26	1	1
ZNF486	Del_8q11.1	1	1
ZNF486	Del_10q21.1	1	1
ZNF486	Del_10q25.2	1	1
ZNF486	Del_12p13.1	1	1
ZNF486	Del_15q15.2	1	1
ZNF486	Del_15q21.1	1	1
ZNF486	Del_15q22.33	1	1
ZNF486	Del_16p13.3	1	1
ZNF486	Del_17q24.3	1	1
ZNF486	Del_21q11.2	1	1
ZNF486	Del_21q21.1	1	1
ZNF486	Del_22q13.32	1	1
CREBBP	13q-Amp	1	1
CREBBP	17q-Amp	1	1
CREBBP	20p-Amp	1	1
CREBBP	20q-Amp	1	1
CREBBP	2q-Amp	1	1
CREBBP	17p-Del	1	1
CREBBP	18p-Del	1	1
CREBBP	18q-Del	1	1
CREBBP	1p-Del	1	1
CREBBP	5q-Del	1	1
CREBBP	Amp_13q12.13	1	1
CREBBP	Amp_13q12.2	1	1
CREBBP	Amp_13q22.1	1	1
CREBBP	Amp_20q11.21	1	1
CREBBP	Amp_20q12	1	1
CREBBP	Amp_20q13.12	1	1
CREBBP	Del_2p12	1	1
CREBBP	Del_8p23.2	1	1
CREBBP	Del_8p22	1	1
CREBBP	Del_17p12	1	1
CREBBP	Del_18p11.31	1	1
CREBBP	Del_18q12.2	1	1
CREBBP	Del_18q21.2	1	1
CREBBP	Del_18q22.1	1	1
GMNN	12p-Amp	1	1
GMNN	12q-Amp	1	1
GMNN	16p-Amp	1	1
GMNN	17q-Amp	1	1
GMNN	2p-Amp	1	1
GMNN	2q-Amp	1	1
GMNN	6p-Amp	1	1
GMNN	1p-Del	1	1
GMNN	20p-Del	1	1
GMNN	22q-Del	1	1
GMNN	4p-Del	1	1
GMNN	4q-Del	1	1
GMNN	5q-Del	1	1
GMNN	8p-Del	1	1
GMNN	Amp_1q31.1	1	1
GMNN	Amp_2q33.1	1	1
GMNN	Amp_5p12	1	1
GMNN	Amp_6p21.1	1	1
GMNN	Amp_10q22.3	1	1
GMNN	Amp_11p15.5	1	1
GMNN	Amp_12p13.33	1	1
GMNN	Amp_16p11.2	1	1
GMNN	Amp_17q12	1	1
GMNN	Amp_19q12	1	1
GMNN	Del_1p36.11	1	1
GMNN	Del_1p33	1	1
GMNN	Del_1p13.2	1	1
GMNN	Del_2p12	1	1
GMNN	Del_2q22.1	1	1
GMNN	Del_3p26.3	1	1
GMNN	Del_3p14.2	1	1
GMNN	Del_3q26.31	1	1
GMNN	Del_4p16.1	1	1
GMNN	Del_4q22.1	1	1
GMNN	Del_4q35.1	1	1
GMNN	Del_5q12.1	1	1
GMNN	Del_5q21.2	1	1
GMNN	Del_5q22.2	1	1
GMNN	Del_5q23.3	1	1
GMNN	Del_6p25.3	1	1
GMNN	Del_6q26	1	1
GMNN	Del_7q31.1	1	1
GMNN	Del_8q11.1	1	1
GMNN	Del_10q21.1	1	1
GMNN	Del_10q23.31	1	1
GMNN	Del_10q25.2	1	1
GMNN	Del_16p13.3	1	1
GMNN	Del_16q23.1	1	1
GMNN	Del_17q24.3	1	1
GMNN	Del_19p13.3	1	1
GMNN	Del_22q13.32	1	1
CTNNB1	Del_2p12	1	1
CTNNB1	Del_7q31.1	1	1
KDM6A	13q-Amp	1	1
KDM6A	16p-Amp	1	1
KDM6A	16q-Amp	1	1
KDM6A	17q-Amp	1	1
KDM6A	2p-Amp	1	1
KDM6A	2q-Amp	1	1
KDM6A	6p-Amp	1	1
KDM6A	9p-Amp	1	1
KDM6A	15q-Del	1	1
KDM6A	18q-Del	1	1
KDM6A	1p-Del	1	1
KDM6A	21q-Del	1	1
KDM6A	22q-Del	1	1
KDM6A	4p-Del	1	1
KDM6A	4q-Del	1	1
KDM6A	5q-Del	1	1
KDM6A	Amp_5p12	1	1
KDM6A	Amp_6p21.1	1	1
KDM6A	Amp_10q22.3	1	1
KDM6A	Amp_11p15.5	1	1
KDM6A	Amp_13q22.1	1	1
KDM6A	Amp_15q26.1	1	1
KDM6A	Amp_17q12	1	1
KDM6A	Amp_19q12	1	1
KDM6A	Del_1p13.2	1	1
KDM6A	Del_2p12	1	1
KDM6A	Del_2q22.1	1	1
KDM6A	Del_3p26.3	1	1
KDM6A	Del_3q26.31	1	1
KDM6A	Del_4p16.1	1	1
KDM6A	Del_6q26	1	1
KDM6A	Del_7q31.1	1	1
KDM6A	Del_8q11.1	1	1
KDM6A	Del_10q23.31	1	1
KDM6A	Del_15q22.33	1	1
KDM6A	Del_18q12.2	1	1
KDM6A	Del_18q21.2	1	1
KDM6A	Del_22q13.32	1	1
12p-Amp	1p-Del	1	1
12p-Amp	22q-Del	1	1
12p-Amp	Del_1p33	1	1
12p-Amp	Del_8q11.1	1	1
12q-Amp	14q-Del	1	1
12q-Amp	15q-Del	1	1
12q-Amp	1p-Del	1	1
12q-Amp	22q-Del	1	1
12q-Amp	Del_1p33	1	1
12q-Amp	Del_3q26.31	1	1
12q-Amp	Del_6p25.3	1	1
12q-Amp	Del_8q11.1	1	1
12q-Amp	Del_10q21.1	1	1
12q-Amp	Del_10q23.31	1	1
12q-Amp	Del_19p13.3	1	1
16p-Amp	2p-Amp	1	1
16p-Amp	2q-Amp	1	1
16p-Amp	1p-Del	1	1
16p-Amp	Amp_2q33.1	1	1
16p-Amp	Amp_11p15.5	1	1
16p-Amp	Amp_15q26.1	1	1
16p-Amp	Del_1p33	1	1
16p-Amp	Del_2p12	1	1
16p-Amp	Del_3p14.2	1	1
16p-Amp	Del_6p25.3	1	1
16p-Amp	Del_7q31.1	1	1
16p-Amp	Del_8q11.1	1	1
16p-Amp	Del_10q21.1	1	1
16p-Amp	Del_16q23.1	1	1
16q-Amp	2p-Amp	1	1
16q-Amp	2q-Amp	1	1
16q-Amp	1p-Del	1	1
16q-Amp	20p-Del	1	1
16q-Amp	Amp_2q33.1	1	1
16q-Amp	Amp_10q22.3	1	1
16q-Amp	Amp_11p15.5	1	1
16q-Amp	Del_1p36.11	1	1
16q-Amp	Del_1p33	1	1
16q-Amp	Del_1p13.2	1	1
16q-Amp	Del_2p12	1	1
16q-Amp	Del_3p14.2	1	1
16q-Amp	Del_6p25.3	1	1
16q-Amp	Del_6q26	1	1
16q-Amp	Del_7q31.1	1	1
16q-Amp	Del_8q11.1	1	1
16q-Amp	Del_10q21.1	1	1
16q-Amp	Del_10q25.2	1	1
16q-Amp	Del_12p13.1	1	1
16q-Amp	Del_16q23.1	1	1
17q-Amp	1p-Del	1	1
17q-Amp	4p-Del	1	1
17q-Amp	5q-Del	1	1
17q-Amp	Del_1p33	1	1
17q-Amp	Del_1p13.2	1	1
17q-Amp	Del_4p16.1	1	1
17q-Amp	Del_8q11.1	1	1
17q-Amp	Del_10q25.2	1	1
17q-Amp	Del_16p13.3	1	1
17q-Amp	Del_16q23.1	1	1
20p-Amp	20p-Del	1	1
2p-Amp	15q-Del	1	1
2p-Amp	17p-Del	1	1
2p-Amp	1p-Del	1	1
2p-Amp	21q-Del	1	1
2p-Amp	22q-Del	1	1
2p-Amp	4p-Del	1	1
2p-Amp	4q-Del	1	1
2p-Amp	5q-Del	1	1
2p-Amp	Amp_16p11.2	1	1
2p-Amp	Del_1p33	1	1
2p-Amp	Del_1p13.2	1	1
2p-Amp	Del_3p26.3	1	1
2p-Amp	Del_4p16.1	1	1
2p-Amp	Del_4q22.1	1	1
2p-Amp	Del_5q21.2	1	1
2p-Amp	Del_5q22.2	1	1
2p-Amp	Del_5q23.3	1	1
2p-Amp	Del_6p25.3	1	1
2p-Amp	Del_6q26	1	1
2p-Amp	Del_7q31.1	1	1
2p-Amp	Del_8q11.1	1	1
2p-Amp	Del_10q21.1	1	1
2p-Amp	Del_10q23.31	1	1
2p-Amp	Del_10q25.2	1	1
2p-Amp	Del_15q11.2	1	1
2p-Amp	Del_15q15.2	1	1
2p-Amp	Del_15q21.1	1	1
2p-Amp	Del_15q22.33	1	1
2p-Amp	Del_16p13.3	1	1
2p-Amp	Del_16q23.1	1	1
2p-Amp	Del_17q24.3	1	1
2p-Amp	Del_19p13.3	1	1
2p-Amp	Del_21q11.2	1	1
2p-Amp	Del_21q21.1	1	1
2p-Amp	Del_22q13.32	1	1
2q-Amp	15q-Del	1	1
2q-Amp	17p-Del	1	1
2q-Amp	1p-Del	1	1
2q-Amp	21q-Del	1	1
2q-Amp	22q-Del	1	1
2q-Amp	4p-Del	1	1
2q-Amp	4q-Del	1	1
2q-Amp	5q-Del	1	1
2q-Amp	Amp_10q22.3	1	1
2q-Amp	Amp_16p11.2	1	1
2q-Amp	Del_1p33	1	1
2q-Amp	Del_1p13.2	1	1
2q-Amp	Del_3p26.3	1	1
2q-Amp	Del_3p14.2	1	1
2q-Amp	Del_3q26.31	1	1
2q-Amp	Del_4p16.1	1	1
2q-Amp	Del_4q22.1	1	1
2q-Amp	Del_5q21.2	1	1
2q-Amp	Del_5q22.2	1	1
2q-Amp	Del_5q23.3	1	1
2q-Amp	Del_6p25.3	1	1
2q-Amp	Del_6q26	1	1
2q-Amp	Del_7q31.1	1	1
2q-Amp	Del_8q11.1	1	1
2q-Amp	Del_10q21.1	1	1
2q-Amp	Del_10q23.31	1	1
2q-Amp	Del_15q11.2	1	1
2q-Amp	Del_15q15.2	1	1
2q-Amp	Del_15q21.1	1	1
2q-Amp	Del_15q22.33	1	1
2q-Amp	Del_16p13.3	1	1
2q-Amp	Del_16q23.1	1	1
2q-Amp	Del_17q24.3	1	1
2q-Amp	Del_19p13.3	1	1
2q-Amp	Del_21q11.2	1	1
2q-Amp	Del_21q21.1	1	1
2q-Amp	Del_22q13.32	1	1
6p-Amp	14q-Del	1	1
6p-Amp	15q-Del	1	1
6p-Amp	1p-Del	1	1
6p-Amp	20p-Del	1	1
6p-Amp	21q-Del	1	1
6p-Amp	5q-Del	1	1
6p-Amp	Del_1p33	1	1
6p-Amp	Del_1p13.2	1	1
6p-Amp	Del_2p12	1	1
6p-Amp	Del_2q22.1	1	1
6p-Amp	Del_3p26.3	1	1
6p-Amp	Del_5q12.1	1	1
6p-Amp	Del_6p25.3	1	1
6p-Amp	Del_6q26	1	1
6p-Amp	Del_7q31.1	1	1
6p-Amp	Del_8q11.1	1	1
6p-Amp	Del_10q21.1	1	1
6p-Amp	Del_10q23.31	1	1
6p-Amp	Del_10q25.2	1	1
6p-Amp	Del_12p13.1	1	1
6p-Amp	Del_14q11.2	1	1
6p-Amp	Del_15q11.2	1	1
6p-Amp	Del_15q15.2	1	1
6p-Amp	Del_15q21.1	1	1
6p-Amp	Del_15q22.33	1	1
6p-Amp	Del_16p13.3	1	1
6p-Amp	Del_16q23.1	1	1
6p-Amp	Del_21q21.1	1	1
8p-Amp	1p-Del	1	1
8p-Amp	8p-Del	1	1
8p-Amp	Del_1p33	1	1
8p-Amp	Del_1p13.2	1	1
8p-Amp	Del_2p12	1	1
8p-Amp	Del_7q31.1	1	1
9p-Amp	1p-Del	1	1
9p-Amp	20p-Del	1	1
9p-Amp	Del_1p33	1	1
9p-Amp	Del_2p12	1	1
9p-Amp	Del_7q31.1	1	1
1p-Del	Amp_2q33.1	1	1
1p-Del	Amp_5p12	1	1
1p-Del	Amp_10q22.3	1	1
1p-Del	Amp_12p13.33	1	1
1p-Del	Amp_16p11.2	1	1
1p-Del	Del_2p12	1	1
1p-Del	Del_7q31.1	1	1
1p-Del	Del_19p13.3	1	1
20p-Del	Amp_19q12	1	1
20p-Del	Amp_20p12.1	1	1
20p-Del	Del_2q22.1	1	1
20p-Del	Del_6p25.3	1	1
21q-Del	Amp_15q26.1	1	1
22q-Del	Amp_15q26.1	1	1
22q-Del	Del_2p12	1	1
5q-Del	Amp_2q33.1	1	1
5q-Del	Amp_10q22.3	1	1
5q-Del	Amp_11p15.5	1	1
5q-Del	Amp_15q26.1	1	1
5q-Del	Amp_19q12	1	1
5q-Del	Del_2p12	1	1
5q-Del	Del_7q31.1	1	1
5q-Del	Del_8q11.1	1	1
8p-Del	Amp_15q26.1	1	1
Amp_2q33.1	Amp_10q22.3	1	1
Amp_2q33.1	Del_1p13.2	1	1
Amp_2q33.1	Del_5q21.2	1	1
Amp_2q33.1	Del_5q22.2	1	1
Amp_2q33.1	Del_6p25.3	1	1
Amp_2q33.1	Del_8q11.1	1	1
Amp_2q33.1	Del_21q11.2	1	1
Amp_5p12	Amp_10q22.3	1	1
Amp_5p12	Del_3q26.31	1	1
Amp_5p12	Del_6q26	1	1
Amp_5p12	Del_7q31.1	1	1
Amp_5p12	Del_16p13.3	1	1
Amp_8p11.23	Del_7q31.1	1	1
Amp_8p11.21	Del_7q31.1	1	1
Amp_10q22.3	Amp_11p15.5	1	1
Amp_10q22.3	Amp_15q26.1	1	1
Amp_10q22.3	Amp_17q12	1	1
Amp_10q22.3	Amp_19q12	1	1
Amp_10q22.3	Del_1p33	1	1
Amp_10q22.3	Del_2p12	1	1
Amp_11p15.5	Amp_16p11.2	1	1
Amp_11p15.5	Del_5q12.1	1	1
Amp_11p15.5	Del_5q23.3	1	1
Amp_11p15.5	Del_7q31.1	1	1
Amp_12p13.33	Del_1p33	1	1
Amp_12p13.33	Del_8q11.1	1	1
Amp_15q26.1	Amp_16p11.2	1	1
Amp_15q26.1	Del_3q26.31	1	1
Amp_15q26.1	Del_5q23.3	1	1
Amp_15q26.1	Del_6p25.3	1	1
Amp_15q26.1	Del_7q31.1	1	1
Amp_15q26.1	Del_10q21.1	1	1
Amp_15q26.1	Del_10q23.31	1	1
Amp_15q26.1	Del_10q25.2	1	1
Amp_15q26.1	Del_12p13.1	1	1
Amp_15q26.1	Del_16p13.3	1	1
Amp_15q26.1	Del_16q23.1	1	1
Amp_15q26.1	Del_17q24.3	1	1
Amp_15q26.1	Del_22q13.32	1	1
Amp_16p11.2	Del_6p25.3	1	1
Amp_16p11.2	Del_7q31.1	1	1
Amp_17q12	Del_16p13.3	1	1
Amp_17q12	Del_16q23.1	1	1
Amp_17q24.1	Del_10q25.2	1	1
Amp_17q24.1	Del_16p13.3	1	1
Amp_19q12	Del_3p26.3	1	1
Amp_19q12	Del_3q26.31	1	1
Amp_19q12	Del_5q23.3	1	1
Amp_19q12	Del_6q26	1	1
Amp_19q12	Del_7q31.1	1	1
Amp_19q12	Del_16q23.1	1	1
Del_1p33	Del_2p12	1	1
Del_1p33	Del_7q31.1	1	1
Del_1p33	Del_19p13.3	1	1
Del_1p13.2	Del_2p12	1	1
Del_1p13.2	Del_7q31.1	1	1
Del_2p12	Del_3p26.3	1	1
Del_2p12	Del_3p14.2	1	1
Del_2p12	Del_3q26.31	1	1
Del_2p12	Del_6p25.3	1	1
Del_2p12	Del_12p13.1	1	1
Del_2q22.1	Del_3p26.3	1	1
Del_2q22.1	Del_7q31.1	1	1
Del_2q22.1	Del_12p13.1	1	1
Del_3p26.3	Del_7q31.1	1	1
Del_5q21.2	Del_7q31.1	1	1
Del_5q22.2	Del_7q31.1	1	1
Del_7q31.1	Del_8q11.1	1	1
Del_7q31.1	Del_12p13.1	1	1
Del_7q31.1	Del_19p13.3	1	1
Del_12p13.1	Del_16q23.1	1	1
4q-Del	5q-Del	1.02e-05	1
Del_8p23.2	Del_22q13.32	1.02e-06	1
18p-Del	Del_15q11.2	1.02e-17	1
18q-Del	Del_15q11.2	1.02e-18	1
Amp_13q12.2	Amp_16p11.2	1.03e-05	1
Del_8p23.2	Del_19p13.3	1.03e-05	1
13q-Amp	Amp_13q22.1	1.03e-105	1
17p-Del	Del_4q35.1	1.04e-08	1
Amp_13q12.13	Amp_20q13.12	1.04e-18	1
Del_5q21.2	Del_5q23.3	1.04e-29	1
TP53	Del_17p12	1.05e-07	1
Del_15q11.2	Del_18p11.31	1.05e-13	1
FBXW7	PTEN	1.06e-05	1
14q-Del	Amp_13q22.1	1.06e-07	1
Amp_13q22.1	Amp_20q13.12	1.06e-18	1
15q-Del	Del_15q22.33	1.06e-66	1
Del_1p36.11	Del_21q11.2	1.07e-05	1
CDH1	NF1	1.07e-10	1
Del_8p22	Del_15q15.2	1.07e-10	1
Del_1p36.11	Del_18q21.2	1.07e-19	1
8q-Amp	Amp_20p11.21	1.08e-05	1
22q-Del	Del_15q22.33	1.08e-06	1
Amp_8q24.21	Amp_20p11.21	1.08e-06	1
DIP2B	BMPR2	1.08e-07	1
Amp_20p11.21	Amp_20q12	1.08e-55	1
TOP2B	ZNF486	1.09e-05	1
Del_4q22.1	Del_15q21.1	1.09e-05	1
SLC26A8	L1TD1	1.09e-07	1
Amp_8q24.21	Amp_20q12	1.09e-08	1
Amp_20q13.12	Del_14q11.2	1.09e-09	1
18q-Del	Del_1p36.11	1.09e-19	1
Amp_20p11.21	Amp_20q13.12	1.09e-53	1
21q-Del	Del_18q22.1	1.11e-06	1
4q-Del	Amp_13q12.2	1.11e-06	1
Del_5q21.2	Del_18q22.1	1.11e-06	1
Amp_20q12	Del_15q11.2	1.11e-07	1
4p-Del	Del_18q21.2	1.11e-09	1
18p-Del	Amp_20q13.12	1.11e-23	1
4q-Del	Del_1p36.11	1.12e-05	1
4q-Del	Del_8p22	1.12e-07	1
Amp_20q13.12	Del_18q12.2	1.12e-19	1
18p-Del	Amp_20q11.21	1.12e-23	1
22q-Del	Del_1p36.11	1.13e-05	1
15q-Del	Del_18p11.31	1.13e-13	1
Amp_20q12	Del_18p11.31	1.13e-27	1
ARID1A	RB1	1.14e-05	1
15q-Del	Del_8p22	1.14e-07	1
Del_4q35.1	Del_8p22	1.14e-07	1
Del_4q22.1	Del_8p22	1.15e-07	1
Del_18p11.31	Del_18q12.2	1.15e-61	1
Del_15q22.33	Del_22q13.32	1.16e-08	1
Amp_13q12.2	Del_18q22.1	1.16e-11	1
Amp_13q12.13	Amp_20q12	1.16e-16	1
Del_14q11.2	Del_18p11.31	1.16e-20	1
NF2	ROS1	1.17e-06	1
Del_10q23.31	Del_18q22.1	1.17e-06	1
17p-Del	Amp_20q11.21	1.17e-07	1
15q-Del	18p-Del	1.17e-16	1
Amp_20p11.21	Del_17p12	1.18e-05	1
Amp_8q24.21	Amp_20q11.21	1.18e-08	1
17q-Amp	Amp_17q24.1	1.18e-24	1
Del_6q26	Del_10q25.2	1.19e-05	1
7p-Amp	Amp_20p12.1	1.19e-06	1
Del_15q21.1	Del_22q13.32	1.19e-07	1
Amp_20q11.21	Del_15q21.1	1.1e-05	1
NF1	ROS1	1.1e-07	1
20q-Amp	Del_17p12	1.1e-11	1
Amp_20q12	Del_18q21.2	1.1e-17	1
20p-Amp	Amp_20p12.1	1.1e-56	1
22q-Del	Del_1p33	1.21e-06	1
TP53	Amp_20q11.21	1.21e-08	1
MLH1	RB1	1.21e-09	1
8p-Amp	8q-Amp	1.21e-33	1
17p-Del	Del_18q21.2	1.21e-38	1
Del_18p11.31	Del_18q21.2	1.21e-61	1
TP53	Del_8p22	1.22e-08	1
RNF43	CDK12	1.23e-06	1
15q-Del	Del_15q21.1	1.23e-55	1
8p-Del	Del_4q22.1	1.24e-05	1
Amp_8p11.21	Amp_20q12	1.24e-06	1
18p-Del	Del_15q15.2	1.24e-16	1
TOP2B	ATM	1.25e-05	1
TP53	18q-Del	1.25e-06	1
Amp_20q11.21	Del_15q15.2	1.25e-06	1
MGA	ATM	1.25e-07	1
7p-Amp	Amp_13q12.2	1.25e-13	1
20q-Amp	18q-Del	1.25e-18	1
15q-Del	Del_15q11.2	1.25e-58	1
MGA	L1TD1	1.26e-05	1
B2M	PRKDC	1.26e-07	1
17p-Del	Del_4q22.1	1.26e-08	1
4p-Del	Del_4q35.1	1.26e-21	1
ROS1	TOP2B	1.27e-05	1
20q-Amp	15q-Del	1.27e-06	1
14q-Del	Del_18q22.1	1.27e-19	1
RBBP7	CREBBP	1.28e-06	1
15q-Del	Del_14q11.2	1.28e-06	1
Del_8p23.2	Del_15q11.2	1.28e-07	1
Del_15q11.2	Del_18q12.2	1.28e-20	1
Amp_13q12.2	Del_18q12.2	1.29e-11	1
PTCH1	SMAD4	1.2e-08	1
18p-Del	Del_21q21.1	1.2e-09	1
Del_8p22	Del_15q21.1	1.2e-09	1
CDH1	NF2	1.2e-12	1
Amp_13q12.2	Amp_20q13.12	1.2e-17	1
Del_10q21.1	Del_10q25.2	1.31e-08	1
Del_15q11.2	Del_17p12	1.31e-16	1
8p-Amp	Amp_8p11.23	1.31e-20	1
15q-Del	22q-Del	1.32e-06	1
15q-Del	Del_4p16.1	1.32e-06	1
Amp_20p11.21	Del_18p11.31	1.32e-11	1
Del_1p13.2	Del_4p16.1	1.33e-06	1
Del_15q22.33	Del_17p12	1.33e-11	1
Del_4p16.1	Del_4q22.1	1.33e-15	1
14q-Del	Del_18q21.2	1.33e-20	1
TP53	Del_18q21.2	1.34e-06	1
PRKDC	PTCH1	1.34e-06	1
Del_15q15.2	Del_18p11.31	1.34e-12	1
Amp_20q12	Del_15q15.2	1.35e-05	1
18q-Del	Del_8p22	1.35e-16	1
20p-Amp	20q-Amp	1.35e-57	1
BMPR2	CREBBP	1.36e-05	1
PTEN	KDM6A	1.36e-07	1
4q-Del	Del_15q15.2	1.37e-05	1
Del_3p14.2	Del_3q26.31	1.37e-06	1
Amp_20q11.21	Del_15q11.2	1.37e-07	1
20p-Del	Del_18q21.2	1.37e-08	1
20q-Amp	Del_18q21.2	1.37e-15	1
18p-Del	Amp_20q12	1.37e-24	1
Amp_13q12.2	Del_15q15.2	1.39e-05	1
Amp_20q11.21	Del_14q11.2	1.39e-09	1
20q-Amp	Amp_13q12.2	1.39e-13	1
Del_18q22.1	Del_21q11.2	1.3e-08	1
PTCH1	PTEN	1.3e-17	1
7p-Amp	Del_8p22	1.41e-07	1
8q-Amp	Amp_20q11.21	1.41e-08	1
Del_15q15.2	Del_17p12	1.41e-14	1
20q-Amp	Del_18q12.2	1.41e-17	1
Del_8p23.2	Del_8p22	1.41e-99	1
ASXL1	SETD2	1.42e-05	1
18q-Del	Del_21q21.1	1.42e-08	1
18q-Del	Amp_20q12	1.42e-21	1
Del_5q21.2	Del_18q12.2	1.43e-05	1
CDH1	PTCH1	1.43e-09	1
18q-Del	Del_22q13.32	1.43e-12	1
17q-Amp	Amp_17q12	1.43e-19	1
13q-Amp	Del_4q35.1	1.44e-05	1
7q-Amp	Amp_13q22.1	1.44e-07	1
14q-Del	18p-Del	1.44e-24	1
NF1	PTEN	1.45e-13	1
1p-Del	Del_18q22.1	1.46e-06	1
BMPR2	ALDH1A3	1.47e-05	1
Amp_20p11.21	Del_18q12.2	1.47e-06	1
MGA	BMPR2	1.47e-07	1
Del_5q22.2	Del_5q23.3	1.47e-34	1
18p-Del	22q-Del	1.48e-08	1
7p-Amp	Amp_20q11.21	1.48e-12	1
ARID1A	NF2	1.49e-05	1
ASXL1	CTNNB1	1.49e-05	1
Amp_13q22.1	Amp_16p11.2	1.49e-06	1
4p-Del	Del_15q11.2	1.49e-08	1
Del_15q22.33	Del_18q12.2	1.49e-24	1
Amp_13q22.1	Del_8p22	1.4e-06	1
20q-Amp	Del_14q11.2	1.4e-08	1
17p-Del	22q-Del	1.4e-08	1
1p-Del	Del_21q21.1	1.51e-06	1
18q-Del	8p-Del	1.51e-07	1
Del_8p22	Del_18q21.2	1.51e-19	1
MGA	ROS1	1.52e-05	1
4p-Del	Del_15q15.2	1.52e-07	1
PTCH1	RB1	1.52e-10	1
Del_18q21.2	Del_22q13.32	1.52e-13	1
RBBP7	FKBP9	1.53e-05	1
17p-Del	Del_4p16.1	1.53e-06	1
Amp_20p11.21	Del_18q21.2	1.53e-06	1
PLAGL2	HLA-A	1.54e-05	1
18p-Del	8p-Del	1.54e-05	1
Del_3p26.3	Del_3p14.2	1.55e-10	1
ALPK2	RB1	1.56e-05	1
PRKDC	PTEN	1.56e-06	1
RNF43	DDX26B	1.56e-07	1
PRKDC	RB1	1.56e-08	1
18p-Del	Del_15q22.33	1.56e-15	1
20q-Amp	18p-Del	1.56e-22	1
17p-Del	Amp_20q13.12	1.57e-07	1
4q-Del	Del_8p23.2	1.57e-07	1
18p-Del	Amp_13q12.2	1.57e-11	1
Del_8p23.2	Del_18q22.1	1.57e-16	1
FAM9A	PRKDC	1.58e-05	1
20q-Amp	8q-Amp	1.58e-06	1
RNF43	ZBTB20	1.58e-09	1
Amp_20p11.21	Amp_20q11.21	1.58e-58	1
17p-Del	Amp_13q22.1	1.59e-08	1
P2RY13	ATM	1.5e-05	1
GPATCH8	ATM	1.5e-05	1
18p-Del	Del_5q22.2	1.5e-05	1
PRKDC	SETD2	1.5e-06	1
18p-Del	Del_5q23.3	1.5e-06	1
Amp_13q12.13	Del_17p12	1.5e-09	1
TP53	Amp_20q13.12	1.5e-11	1
ARID1A	NF1	1.61e-05	1
7p-Amp	Amp_19q12	1.61e-05	1
Del_17p12	Del_18p11.31	1.61e-29	1
FAM9A	MPHOSPH10	1.62e-05	1
13q-Amp	Amp_16p11.2	1.62e-06	1
ALPK2	L1TD1	1.62e-07	1
Del_8p23.2	Del_15q21.1	1.62e-07	1
20q-Amp	14q-Del	1.62e-08	1
18q-Del	Del_4q22.1	1.63e-07	1
Del_1p33	Del_22q13.32	1.63e-07	1
14q-Del	Del_14q11.2	1.64e-60	1
14q-Del	Amp_20q11.21	1.65e-10	1
6p-Amp	Amp_6p21.1	1.66e-09	1
8p-Amp	Amp_8q24.21	1.66e-22	1
17p-Del	8p-Del	1.67e-06	1
TOP2B	CREBBP	1.68e-05	1
4q-Del	Del_15q21.1	1.68e-05	1
Del_10q25.2	Del_15q15.2	1.68e-05	1
RNF43	PRKDC	1.69e-05	1
MGA	ALPK2	1.69e-08	1
Del_8p23.2	Del_17p12	1.69e-15	1
Del_10q21.1	Del_22q13.32	1.6e-05	1
Del_4q35.1	Del_18q22.1	1.6e-10	1
5q-Del	Del_5q21.2	1.6e-21	1
Amp_20q13.12	Del_15q22.33	1.71e-07	1
20p-Amp	7p-Amp	1.72e-05	1
PRKDC	CREBBP	1.72e-08	1
Amp_13q12.2	Del_8p23.2	1.72e-08	1
18q-Del	5q-Del	1.73e-05	1
Del_8p22	Del_8q11.1	1.73e-05	1
20p-Del	Del_18q12.2	1.73e-09	1
20q-Amp	17p-Del	1.74e-06	1
Del_14q11.2	Del_15q22.33	1.74e-06	1
17p-Del	Del_22q13.32	1.74e-09	1
Amp_13q12.2	Del_18p11.31	1.74e-11	1
4q-Del	Del_18q22.1	1.75e-10	1
Del_1p13.2	Del_18q22.1	1.75e-10	1
NF1	PTCH1	1.75e-11	1
22q-Del	Del_18q12.2	1.75e-14	1
Amp_20q11.21	Del_18p11.31	1.75e-25	1
GRB2	PTGDR	1.76e-05	1
NF2	PTCH1	1.76e-08	1
4q-Del	Del_4q35.1	1.76e-33	1
PRKDC	L1TD1	1.77e-06	1
ROS1	RBBP7	1.77e-06	1
Amp_13q12.2	Del_17p12	1.77e-09	1
20q-Amp	Amp_8q24.21	1.79e-08	1
7q-Amp	Amp_13q12.2	1.79e-09	1
17p-Del	Del_17q24.3	1.7e-07	1
8p-Del	Del_15q21.1	1.7e-07	1
4p-Del	Del_8p22	1.81e-06	1
4q-Del	Del_18p11.31	1.81e-07	1
Del_15q21.1	Del_15q22.33	1.81e-50	1
RNF43	ROS1	1.82e-06	1
Del_1p36.11	Del_1p33	1.82e-17	1
Del_1p13.2	Del_17p12	1.83e-06	1
TP53	Del_18q22.1	1.83e-07	1
Amp_13q12.13	Amp_20p11.21	1.83e-08	1
15q-Del	Del_18q12.2	1.83e-22	1
1p-Del	Del_18q21.2	1.85e-06	1
2q-Amp	Amp_2q33.1	1.85e-12	1
18p-Del	1p-Del	1.87e-05	1
NLRC4	ATM	1.87e-06	1
13q-Amp	Del_8p23.2	1.87e-06	1
ARID1A	BCOR	1.89e-05	1
Del_8p22	Del_22q13.32	1.89e-05	1
NF2	CTNNB1	1.8e-07	1
Del_10q23.31	Del_15q15.2	1.92e-05	1
MLH1	PTCH1	1.92e-07	1
Amp_20q13.12	Del_18q21.2	1.92e-18	1
7q-Amp	Amp_20p11.21	1.93e-05	1
ROS1	CTNNB1	1.93e-06	1
ARID1A	CDH1	1.94e-05	1
ARID1A	BMPR2	1.94e-07	1
Del_4p16.1	Del_15q22.33	1.95e-07	1
4p-Del	Del_18p11.31	1.95e-08	1
13q-Amp	Amp_20q13.12	1.95e-16	1
Amp_20q12	Del_1p36.11	1.97e-05	1
4p-Del	Del_15q21.1	1.98e-07	1
Amp_13q12.2	Amp_20p11.21	1.98e-08	1
RNF43	BMPR2	1.99e-12	1
Amp_8q24.21	Del_8p22	1.99e-20	1
ST3GAL6	C11orf30	1e-04	1
7p-Amp	Amp_8p11.21	1e-05	1
8q-Amp	Amp_20p12.1	1e-05	1
Amp_20q12	Del_8p22	1e-09	1
Amp_8p11.21	Amp_8q24.21	2.01e-40	1
PRKDC	BMPR2	2.02e-05	1
15q-Del	Del_4q22.1	2.02e-06	1
TP53	8p-Del	2.03e-05	1
Del_4q22.1	Del_18q22.1	2.03e-08	1
13q-Amp	20q-Amp	2.03e-11	1
Amp_20q13.12	Del_8p22	2.03e-11	1
20q-Amp	Amp_20p11.21	2.03e-48	1
Amp_20q11.21	Del_17p12	2.04e-12	1
Del_8p22	Del_18q22.1	2.04e-20	1
Del_8p23.2	Del_15q22.33	2.05e-06	1
Del_15q21.1	Del_18p11.31	2.05e-11	1
15q-Del	17p-Del	2.05e-12	1
NF1	ATM	2.05e-14	1
Del_15q21.1	Del_18q22.1	2.05e-18	1
Del_1p33	Del_1p13.2	2.05e-25	1
ROS1	HLA-A	2.06e-05	1
PRKDC	ATM	2.06e-09	1
Del_15q11.2	Del_18q22.1	2.06e-22	1
Amp_20p12.1	Amp_20p11.21	2.06e-52	1
Amp_8p11.23	Del_8p22	2.07e-05	1
Amp_13q12.13	Amp_16p11.2	2.07e-05	1
18q-Del	Amp_20q11.21	2.07e-19	1
Amp_8q24.21	Amp_20q13.12	2.08e-10	1
Del_15q15.2	Del_18q21.2	2.08e-21	1
RNF43	TOP2B	2.09e-07	1
RNF43	MGA	2.11e-07	1
13q-Amp	7q-Amp	2.11e-08	1
14q-Del	Del_18p11.31	2.11e-23	1
Del_8p22	Del_15q11.2	2.12e-08	1
Amp_13q12.13	Del_18q12.2	2.12e-11	1
5q-Del	Del_5q23.3	2.13e-24	1
13q-Amp	Del_18q21.2	2.14e-10	1
Amp_8p11.21	Del_8p23.2	2.14e-10	1
14q-Del	Del_18q12.2	2.14e-21	1
Del_1p13.2	Del_4q22.1	2.15e-05	1
20p-Amp	Amp_13q22.1	2.16e-05	1
Del_8p23.2	Del_15q15.2	2.16e-08	1
Del_4q35.1	Del_21q21.1	2.17e-05	1
Amp_13q22.1	Del_18q21.2	2.17e-12	1
Del_4q35.1	Del_22q13.32	2.18e-05	1
13q-Amp	18q-Del	2.18e-10	1
Del_17p12	Del_18q21.2	2.18e-44	1
15q-Del	Del_18q21.2	2.19e-22	1
Amp_8p11.23	Amp_20q12	2.1e-05	1
7p-Amp	Amp_13q12.13	2.1e-12	1
Amp_13q12.2	Amp_20q11.21	2.1e-16	1
13q-Amp	Del_14q11.2	2.21e-07	1
Del_1p13.2	Del_18p11.31	2.22e-05	1
Del_18p11.31	Del_21q21.1	2.22e-08	1
LARP4B	GMPS	2.23e-05	1
ATM	CREBBP	2.23e-07	1
MAPK6	RLIM	2.24e-05	1
5q-Del	Del_17p12	2.24e-05	1
7p-Amp	Amp_20q13.12	2.24e-13	1
PTCH1	BMPR2	2.25e-08	1
18p-Del	4q-Del	2.26e-09	1
NF1	C14orf184	2.27e-05	1
Del_12p13.1	Del_18q22.1	2.27e-05	1
Del_4q35.1	Del_21q11.2	2.2e-06	1
TP53	Amp_13q12.2	2.32e-05	1
L1TD1	BMPR2	2.32e-05	1
Del_18q12.2	Del_22q13.32	2.32e-15	1
18p-Del	Del_14q11.2	2.32e-21	1
PRKDC	TOP2B	2.33e-05	1
Amp_8p11.23	Amp_20q13.12	2.34e-06	1
MLH1	PTEN	2.34e-10	1
13q-Amp	Amp_13q12.2	2.34e-98	1
ZBTB20	ROS1	2.35e-06	1
22q-Del	Del_1p13.2	2.36e-08	1
PTCH1	CREBBP	2.37e-06	1
RB1	CREBBP	2.37e-06	1
18q-Del	Amp_13q22.1	2.37e-12	1
ASXL1	PTEN	2.38e-05	1
Del_5q22.2	Del_18q21.2	2.38e-05	1
20p-Amp	Del_18p11.31	2.38e-07	1
16p-Amp	16q-Amp	2.38e-20	1
Del_4q35.1	Del_18q12.2	2.39e-09	1
20q-Amp	Amp_20q11.21	2.39e-101	1
MGA	BCORL1	2.3e-06	1
BMPR2	SETD2	2.41e-06	1
C11orf30	PIK3R1	2.42e-05	1
Amp_13q22.1	Amp_20p11.21	2.42e-07	1
16q-Amp	Amp_13q12.2	2.43e-05	1
15q-Del	4q-Del	2.44e-06	1
15q-Del	Amp_13q12.2	2.45e-05	1
Del_18q21.2	Del_21q11.2	2.45e-08	1
18p-Del	Del_4p16.1	2.46e-09	1
Del_10q23.31	Del_18q21.2	2.47e-07	1
RB1	CTNNB1	2.48e-05	1
22q-Del	Del_18p11.31	2.4e-05	1
13q-Amp	Amp_20p11.21	2.4e-06	1
4q-Del	Del_15q11.2	2.51e-07	1
17p-Del	4q-Del	2.51e-08	1
PTCH1	ATM	2.52e-13	1
Amp_20p12.1	Amp_20q13.12	2.52e-27	1
7p-Amp	7q-Amp	2.52e-70	1
8p-Del	Del_15q15.2	2.54e-08	1
Amp_20q11.21	Del_18q22.1	2.54e-17	1
Del_15q22.33	Del_18q21.2	2.54e-24	1
15q-Del	Amp_20q11.21	2.55e-09	1
17p-Del	Del_8p22	2.55e-15	1
Del_18p11.31	Del_18q22.1	2.55e-63	1
BMPR2	SLC12A6	2.57e-05	1
17p-Del	Del_18p11.31	2.58e-23	1
Amp_17q12	Amp_17q24.1	2.5e-19	1
RB1	BCORL1	2.61e-05	1
RB1	SLC12A6	2.61e-05	1
8p-Del	Del_15q22.33	2.61e-06	1
Amp_13q22.1	Del_17p12	2.61e-08	1
ALPK2	ATM	2.62e-07	1
ROS1	LARP4B	2.66e-05	1
Amp_20q12	Del_18q22.1	2.66e-18	1
Del_15q11.2	Del_15q22.33	2.67e-50	1
13q-Amp	20p-Amp	2.69e-05	1
SELPLG	ATM	2.6e-05	1
FKBP9	ATM	2.6e-05	1
17p-Del	Amp_20q12	2.6e-07	1
SLC26A8	ATM	2.72e-06	1
15q-Del	Amp_20q13.12	2.76e-07	1
STARD3NL	SLC12A6	2.77e-06	1
Del_10q25.2	Del_22q13.32	2.77e-06	1
ALPK2	LARP4B	2.77e-09	1
7q-Amp	Amp_13q12.13	2.78e-09	1
Amp_13q12.2	Amp_20q12	2.78e-16	1
CDH1	RB1	2.79e-10	1
5q-Del	Del_5q12.1	2.79e-21	1
NF1	CREBBP	2.7e-06	1
8q-Amp	Del_8p23.2	2.7e-08	1
8p-Del	Del_18q21.2	2.7e-08	1
Del_4q22.1	Del_22q13.32	2.82e-06	1
NF2	ALPK2	2.83e-05	1
Amp_13q12.13	Del_8p22	2.83e-07	1
Amp_17q24.1	Del_17p12	2.84e-05	1
7q-Amp	Amp_20p12.1	2.84e-06	1
ATM	CTNNB1	2.84e-08	1
18p-Del	Del_1p36.11	2.84e-15	1
Del_1p36.11	Del_14q11.2	2.85e-05	1
ARID1A	RNF43	2.86e-06	1
TP53	Amp_20q12	2.87e-10	1
22q-Del	Del_18q22.1	2.87e-13	1
7p-Amp	8q-Amp	2.88e-06	1
TP53	Del_8p23.2	2.88e-08	1
7q-Amp	Amp_19q12	2.91e-06	1
4q-Del	Del_18q21.2	2.91e-10	1
Del_1p13.2	Del_18q21.2	2.91e-10	1
DDX26B	BMPR2	2.93e-06	1
18q-Del	Del_18q12.2	2.93e-120	1
B2M	ZBTB20	2.94e-05	1
4q-Del	Del_18q12.2	2.94e-10	1
Del_1p13.2	Del_18q12.2	2.94e-10	1
13q-Amp	7p-Amp	2.94e-11	1
ZBTB20	ATM	2.95e-05	1
RNF43	ST3GAL6	2.96e-05	1
18p-Del	4p-Del	2.96e-11	1
SETD2	ATM	2.97e-06	1
15q-Del	Del_15q15.2	2.97e-56	1
20q-Amp	Del_15q11.2	2.98e-06	1
4q-Del	Del_22q13.32	2.99e-07	1
RNF43	MLH1	2.9e-05	1
Del_1p33	Del_18q12.2	2.9e-05	1
Del_12p13.1	Del_18q21.2	2.9e-05	1
RNF43	FAM9A	2e-04	1
20q-Amp	Del_15q15.2	2e-04	1
18q-Del	Amp_20p11.21	3.01e-07	1
Del_15q21.1	Del_17p12	3.01e-13	1
1p-Del	Del_4p16.1	3.03e-06	1
17p-Del	18q-Del	3.03e-38	1
MVK	DDX26B	3.04e-08	1
Del_10q23.31	Del_10q25.2	3.04e-17	1
8p-Del	Del_18q22.1	3.06e-09	1
Del_4q22.1	Del_5q12.1	3.07e-05	1
C11orf30	HLA-A	3.07e-06	1
Del_6p25.3	Del_6q26	3.07e-07	1
Amp_20q11.21	Del_8p22	3.09e-08	1
Amp_20q11.21	Del_18q12.2	3.09e-18	1
Del_1p36.11	Del_17p12	3.11e-08	1
22q-Del	Del_17p12	3.12e-08	1
Amp_20q12	Del_15q22.33	3.12e-08	1
Del_1p33	Del_18q21.2	3.13e-05	1
Amp_20p11.21	Del_18q22.1	3.15e-06	1
13q-Amp	Del_8p22	3.17e-06	1
18q-Del	Del_18q21.2	3.1e-110	1
18q-Del	Amp_20q13.12	3.21e-21	1
Del_15q11.2	Del_22q13.32	3.22e-09	1
Amp_20q13.12	Del_8p23.2	3.22e-10	1
22q-Del	Del_10q21.1	3.23e-05	1
14q-Del	22q-Del	3.24e-06	1
Del_8p22	Del_18q12.2	3.24e-19	1
FMN2	RB1	3.25e-06	1
Del_18q12.2	Del_21q21.1	3.25e-09	1
21q-Del	Del_18p11.31	3.26e-06	1
Del_6q26	Del_10q23.31	3.26e-06	1
20p-Amp	Amp_20q13.12	3.27e-47	1
20p-Amp	18q-Del	3.28e-05	1
18p-Del	Amp_13q22.1	3.29e-10	1
4q-Del	Del_4q22.1	3.29e-34	1
Del_17q24.3	Del_19p13.3	3.2e-05	1
22q-Del	Del_15q15.2	3.2e-06	1
Del_4p16.1	Del_15q15.2	3.2e-06	1
Del_1p36.11	Del_18p11.31	3.2e-12	1
7q-Amp	Amp_8q24.21	3.32e-05	1
15q-Del	8p-Del	3.32e-07	1
ROS1	CREBBP	3.35e-05	1
GPATCH8	CREBBP	3.36e-05	1
15q-Del	Del_8p23.2	3.36e-07	1
17p-Del	Amp_13q12.2	3.36e-09	1
Amp_13q12.13	Del_18q21.2	3.36e-11	1
NF2	RB1	3.37e-09	1
Amp_20q12	Amp_20q13.12	3.37e-120	1
20q-Amp	Amp_13q22.1	3.37e-13	1
18q-Del	Del_17p12	3.37e-43	1
13q-Amp	Amp_13q12.13	3.37e-92	1
ARID1A	ATM	3.38e-07	1
ROS1	ATM	3.3e-07	1
20q-Amp	Del_8p22	3.3e-07	1
Del_8p22	Del_17p12	3.3e-19	1
4p-Del	Del_4q22.1	3.42e-22	1
Del_12p13.1	Del_17p12	3.43e-07	1
1p-Del	Del_22q13.32	3.44e-06	1
18q-Del	Del_15q21.1	3.44e-15	1
Del_15q11.2	Del_15q15.2	3.44e-61	1
15q-Del	Del_17p12	3.45e-13	1
PRRG1	DDX26B	3.46e-05	1
18p-Del	Del_4q35.1	3.47e-09	1
Amp_20q12	Del_18q12.2	3.48e-20	1
18p-Del	5q-Del	3.4e-05	1
TP53	17p-Del	3.4e-06	1
TP53	Del_18q12.2	3.4e-06	1
NF1	CTNNB1	3.4e-07	1
ASXL1	PTCH1	3.51e-06	1
ASXL1	CREBBP	3.53e-05	1
MLH1	NF1	3.53e-06	1
5q-Del	Del_18q12.2	3.54e-05	1
4p-Del	Del_15q22.33	3.55e-07	1
ZBTB20	BMPR2	3.56e-05	1
Amp_13q12.13	Del_14q11.2	3.57e-09	1
PRKDC	MGA	3.59e-06	1
7p-Amp	Amp_20q12	3.59e-13	1
OR4D10	C11orf30	3.5e-05	1
4q-Del	Del_5q21.2	3.61e-05	1
13q-Amp	Del_18q12.2	3.61e-10	1
Amp_13q22.1	Del_18p11.31	3.61e-10	1
Del_4p16.1	Del_8p23.2	3.63e-06	1
EGR1	SLC26A8	3.64e-05	1
ROS1	MPHOSPH10	3.64e-06	1
18q-Del	Del_12p13.1	3.66e-06	1
14q-Del	Del_15q21.1	3.66e-07	1
14q-Del	Del_1p36.11	3.67e-06	1
Del_4q22.1	Del_18q21.2	3.68e-08	1
Del_4p16.1	Del_18p11.31	3.69e-07	1
8q-Amp	Del_8p22	3.69e-09	1
13q-Amp	Amp_20q12	3.6e-14	1
Del_5q21.2	Del_5q22.2	3.71e-48	1
EGR1	CDK12	3.72e-05	1
ARID1A	FAM9A	3.72e-06	1
13q-Amp	Del_17p12	3.72e-07	1
FAM9A	ZBTB20	3.73e-05	1
ZBTB20	GRB2	3.73e-05	1
18q-Del	Del_8p23.2	3.73e-14	1
22q-Del	Del_22q13.32	3.73e-58	1
C2orf29	PTEN	3.74e-05	1
Del_4q22.1	Del_15q22.33	3.74e-05	1
Del_12p13.1	Del_14q11.2	3.76e-07	1
DIP2B	ROS1	3.77e-06	1
Del_14q11.2	Del_15q21.1	3.77e-06	1
13q-Amp	Amp_20q11.21	3.77e-14	1
PRKDC	FYN	3.79e-06	1
Del_1p36.11	Del_18q22.1	3.79e-20	1
WNT1	PLAGL2	3.7e-05	1
18q-Del	Del_5q23.3	3.83e-06	1
Amp_8p11.23	Amp_8p11.21	3.85e-44	1
17p-Del	Del_5q23.3	3.87e-07	1
Del_17p12	Del_17q24.3	3.88e-08	1
17p-Del	18p-Del	3.89e-30	1
18q-Del	21q-Del	3.8e-06	1
Del_4p16.1	Del_18q22.1	3.91e-10	1
NF2	CREBBP	3.92e-06	1
WNT1	TOP2B	3.93e-06	1
ALPK2	BMPR2	3.93e-07	1
7p-Amp	Amp_8q24.21	3.93e-09	1
18p-Del	Del_22q13.32	3.93e-09	1
Amp_20q13.12	Del_18q22.1	3.93e-19	1
16q-Amp	Amp_13q12.13	3.95e-05	1
20p-Amp	Amp_20p11.21	3.96e-49	1
CDH1	SETD2	3.98e-05	1
ASXL1	SLC12A6	3.99e-05	1
20p-Amp	Amp_13q12.2	3.99e-07	1
4p-Del	Del_17p12	3.99e-08	1
12q-Amp	2q-Amp	3.9e-05	1
ALPK2	SETD2	3.9e-08	1
16q-Amp	7q-Amp	3e-04	1
18p-Del	Del_15q21.1	3e-14	1
8p-Del	Del_8p22	3e-48	1
18p-Del	Amp_20p11.21	4.01e-11	1
RBBP7	SETD2	4.02e-05	1
FAM9A	ROS1	4.03e-05	1
NF2	PTEN	4.03e-10	1
17p-Del	Del_15q15.2	4.03e-14	1
NF1	PIK3R1	4.05e-06	1
PTCH1	NLRC4	4.05e-06	1
NLRC4	RB1	4.05e-06	1
Del_4q35.1	Del_8p23.2	4.05e-06	1
MAPK6	LARP4B	4.07e-06	1
Del_1p13.2	Del_15q22.33	4.08e-05	1
Del_1p33	Del_18q22.1	4.09e-06	1
Amp_20q11.21	Del_8p23.2	4.09e-07	1
22q-Del	Del_14q11.2	4.11e-06	1
22q-Del	Del_15q21.1	4.11e-06	1
Del_4p16.1	Del_15q21.1	4.11e-06	1
Del_5q22.2	Del_18q22.1	4.11e-06	1
Amp_13q12.2	Del_18q21.2	4.13e-12	1
NF2	NF1	4.18e-09	1
Del_14q11.2	Del_15q11.2	4.19e-08	1
RNF43	ATM	4.21e-05	1
4p-Del	Del_8p23.2	4.21e-07	1
13q-Amp	17p-Del	4.22e-07	1
20q-Amp	Del_18q22.1	4.25e-16	1
20p-Amp	Amp_20q12	4.25e-53	1
ROS1	RB1	4.26e-05	1
BCL9	ROS1	4.26e-06	1
NLRC4	ROS1	4.26e-06	1
FMN2	PTEN	4.26e-07	1
PTCH1	TOP2B	4.28e-05	1
RB1	TOP2B	4.28e-05	1
17p-Del	Del_15q11.2	4.28e-13	1
14q-Del	18q-Del	4.28e-20	1
17p-Del	Del_17p12	4.2e-90	1
DIP2B	CDK12	4.31e-05	1
LARP4B	CDK12	4.31e-05	1
RNF43	BCOR	4.31e-06	1
7p-Amp	Del_8p23.2	4.32e-05	1
4p-Del	Del_18q12.2	4.32e-08	1
Del_5q23.3	Del_15q15.2	4.33e-05	1
PTEN	ATM	4.33e-14	1
NF1	RB1	4.36e-10	1
1p-Del	Del_21q11.2	4.37e-05	1
4p-Del	Del_1p13.2	4.39e-05	1
17p-Del	Del_8p23.2	4.39e-12	1
Del_18q21.2	Del_18q22.1	4.39e-120	1
8q-Amp	Amp_8p11.21	4.3e-37	1
17p-Del	Del_18q22.1	4.3e-41	1
MLH1	PRKDC	4.41e-05	1
CHUK	TOP2B	4.42e-05	1
C11orf30	TOP2B	4.42e-05	1
18q-Del	22q-Del	4.44e-11	1
4q-Del	Del_5q22.2	4.45e-05	1
Del_4p16.1	Del_22q13.32	4.45e-08	1
Del_15q15.2	Del_15q22.33	4.45e-51	1
Del_15q22.33	Del_18p11.31	4.46e-12	1
18p-Del	Del_17p12	4.46e-37	1
18p-Del	Del_4q22.1	4.47e-06	1
18q-Del	Del_4q35.1	4.48e-08	1
18p-Del	Del_8p23.2	4.49e-10	1
CDH1	ATM	4.52e-09	1
Amp_8q24.21	Del_8p23.2	4.54e-20	1
18q-Del	Del_4p16.1	4.56e-07	1
Del_4q22.1	Del_18q12.2	4.57e-08	1
22q-Del	4q-Del	4.58e-05	1
Del_4q35.1	Del_18q21.2	4.58e-11	1
20q-Amp	Del_18p11.31	4.58e-26	1
Del_1p36.11	Del_21q21.1	4.59e-06	1
Del_5q23.3	Del_18q22.1	4.5e-09	1
14q-Del	17p-Del	4.5e-13	1
ARID1A	DDX26B	4.62e-05	1
PTEN	CTNNB1	4.64e-12	1
RNF43	PTEN	4.65e-05	1
Amp_20q12	Del_8p23.2	4.65e-09	1
18p-Del	Del_18q21.2	4.66e-82	1
17p-Del	Del_5q21.2	4.68e-05	1
18p-Del	Del_5q21.2	4.68e-05	1
4p-Del	Del_22q13.32	4.69e-07	1
Del_18q12.2	Del_18q22.1	4.6e-114	1
Amp_8p11.23	Amp_8q24.21	4.6e-25	1
20q-Amp	Amp_13q12.13	4.71e-14	1
17p-Del	Amp_13q12.13	4.72e-09	1
4p-Del	Del_4p16.1	4.72e-37	1
13q-Amp	4q-Del	4.73e-05	1
NLRC4	CREBBP	4.75e-05	1
BCORL1	CREBBP	4.75e-05	1
DDX26B	BCORL1	4.75e-06	1
Del_18p11.31	Del_21q11.2	4.75e-10	1
Del_4q22.1	Del_4q35.1	4.75e-21	1
Del_10q21.1	Del_10q23.31	4.78e-09	1
APC	PTEN	4.79e-06	1
8p-Del	Del_17p12	4.79e-08	1
22q-Del	Del_8p23.2	4.81e-05	1
18q-Del	20p-Del	4.81e-06	1
PRRG1	RBBP7	4.82e-05	1
Del_1p33	Del_4p16.1	4.83e-05	1
18q-Del	Amp_13q12.2	4.83e-12	1
BMPR2	ATM	4.85e-06	1
Del_5q12.1	Del_5q22.2	4.88e-18	1
8p-Del	Amp_20q12	4.89e-05	1
15q-Del	18q-Del	4.89e-19	1
Del_6q26	Del_17p12	4.8e-05	1
RNF43	LARP4B	4.91e-07	1
RNF43	CREBBP	4.93e-05	1
17q-Amp	2p-Amp	4.93e-06	1
17q-Amp	2q-Amp	4.93e-06	1
TP53	18p-Del	4.93e-07	1
7q-Amp	Amp_20q11.21	4.94e-10	1
Amp_13q12.13	Del_18p11.31	4.94e-11	1
5q-Del	Del_5q22.2	4.94e-20	1
Amp_20p12.1	Amp_20q12	4.94e-31	1
21q-Del	Del_22q13.32	4.95e-06	1
22q-Del	Del_10q25.2	4.96e-07	1
Del_1p36.11	Del_18q12.2	4.96e-22	1
20q-Amp	Amp_20q13.12	4.98e-108	1
8p-Amp	Amp_12p13.33	4e-04	1
Del_1p33	Del_4q22.1	4e-04	1
Del_8q11.1	Del_15q15.2	4e-04	1
Del_10q23.31	Del_18q12.2	4e-05	1
DIP2B	CREBBP	5.01e-05	1
LARP4B	CREBBP	5.01e-05	1
12p-Amp	Amp_12p13.33	5.01e-45	1
13q-Amp	18p-Del	5.02e-09	1
8q-Amp	Amp_8q24.21	5.03e-67	1
Del_8p23.2	Del_8q11.1	5.04e-07	1
20p-Del	Del_17p12	5.06e-05	1
Del_3p26.3	Del_4p16.1	5.06e-05	1
Del_4q22.1	Del_17p12	5.07e-09	1
18p-Del	Del_18p11.31	5.07e-102	1
Amp_20q11.21	Amp_20q13.12	5.08e-107	1
22q-Del	Del_4q22.1	5.09e-05	1
Amp_8q24.21	Del_18q22.1	5.11e-05	1
Amp_8p11.21	Amp_12p13.33	5.13e-05	1
Del_6q26	Del_18q22.1	5.15e-05	1
Del_18q22.1	Del_19p13.3	5.15e-05	1
Amp_13q12.2	Del_14q11.2	5.16e-08	1
15q-Del	4p-Del	5.17e-07	1
7p-Amp	Amp_20p11.21	5.18e-08	1
Del_5q23.3	Del_15q21.1	5.21e-05	1
17p-Del	5q-Del	5.24e-05	1
17p-Del	Del_6q26	5.24e-05	1
SMAD4	RB1	5.25e-07	1
2p-Amp	Amp_2q33.1	5.27e-10	1
P2RY13	MAP4K3	5.28e-07	1
Del_4p16.1	Del_18q21.2	5.31e-09	1
12q-Amp	Amp_12p13.33	5.33e-29	1
Amp_8q24.21	Del_18q21.2	5.34e-05	1
7q-Amp	8p-Amp	5.36e-05	1
Del_8p23.2	Del_18q12.2	5.37e-16	1
18q-Del	Del_5q21.2	5.38e-05	1
Del_4q35.1	Del_15q11.2	5.38e-05	1
13q-Amp	14q-Del	5.38e-07	1
FKBP9	LARP4B	5.3e-05	1
Del_4p16.1	Del_8p22	5.3e-05	1
Amp_13q12.2	Del_8p22	5.3e-09	1
18p-Del	Amp_13q12.13	5.3e-11	1
Amp_13q12.13	Amp_13q12.2	5.3e-121	1
PRKDC	ASXL1	5.41e-05	1
Del_17p12	Del_19p13.3	5.41e-08	1
SLC26A8	CREBBP	5.43e-05	1
1p-Del	Del_18q12.2	5.43e-07	1
14q-Del	Del_15q15.2	5.44e-08	1
SELPLG	PTCH1	5.46e-05	1
CDH1	ALPK2	5.47e-07	1
4q-Del	Del_17p12	5.47e-08	1
Del_8p22	Del_18p11.31	5.4e-11	1
4p-Del	Del_1p33	5.52e-05	1
4q-Del	Amp_13q12.13	5.53e-07	1
Del_4q35.1	Del_17p12	5.55e-09	1
Del_1p13.2	Del_22q13.32	5.56e-09	1
2p-Amp	2q-Amp	5.57e-14	1
Amp_17q12	Amp_20q11.21	5.59e-05	1
22q-Del	Del_18q21.2	5.62e-13	1
8p-Amp	Amp_8p11.21	5.62e-22	1
RNF43	HLA-A	5.65e-05	1
12p-Amp	8p-Amp	5.65e-05	1
4p-Del	Del_8q11.1	5.65e-05	1
14q-Del	Del_8p23.2	5.65e-06	1
Del_4p16.1	Del_4q35.1	5.65e-12	1
SMAD4	CTNNB1	5.66e-06	1
Del_15q21.1	Del_18q21.2	5.66e-18	1
7q-Amp	8q-Amp	5.69e-06	1
20q-Amp	Del_8p23.2	5.69e-07	1
Amp_20q12	Del_17p12	5.69e-13	1
MVK	BCORL1	5.6e-08	1
CDH1	PTEN	5.71e-10	1
18q-Del	Del_21q11.2	5.74e-10	1
CDH1	MLH1	5.76e-08	1
12q-Amp	8p-Amp	5.77e-05	1
PRKDC	FBXW7	5.79e-05	1
Del_5q23.3	Del_18q12.2	5.7e-08	1
18p-Del	Del_8p22	5.7e-13	1
8p-Del	Del_8p23.2	5.7e-49	1
NF2	DDX26B	5.81e-06	1
4p-Del	Del_5q12.1	5.85e-05	1
16p-Amp	Amp_13q22.1	5.86e-05	1
NF2	ATM	5.87e-09	1
14q-Del	Amp_20q13.12	5.88e-10	1
RNF43	ZNF486	5.94e-05	1
Amp_8q24.21	Amp_20p12.1	5.95e-06	1
Amp_20q13.12	Del_15q15.2	5.96e-05	1
Amp_13q22.1	Amp_20q11.21	5.9e-16	1
Amp_20q12	Del_21q11.2	5e-04	1
Del_4q35.1	Del_18p11.31	5e-08	1
Del_1p36.11	Del_22q13.32	6.01e-08	1
ARID1A	ROS1	6.02e-05	1
C11orf30	ROS1	6.02e-05	1
ROS1	GPATCH8	6.02e-05	1
CDH1	PRKDC	6.04e-05	1
CDH1	SMAD4	6.04e-06	1
FKBP9	MAP4K3	6.09e-05	1
7q-Amp	Amp_20q12	6.09e-11	1
PIK3R1	ATM	6.12e-05	1
DIP2B	PIK3R1	6.13e-05	1
22q-Del	Del_4p16.1	6.13e-05	1
18q-Del	Del_19p13.3	6.14e-05	1
RNF43	BCL9	6.14e-06	1
Amp_8p11.21	Del_8p22	6.14e-11	1
Amp_13q22.1	Del_18q22.1	6.14e-12	1
18p-Del	Amp_20p12.1	6.16e-05	1
Amp_20p12.1	Del_18p11.31	6.19e-06	1
4p-Del	Amp_13q12.2	6.1e-05	1
8p-Del	Amp_8q24.21	6.21e-06	1
18q-Del	Del_10q23.31	6.22e-05	1
DIP2B	SLC12A6	6.23e-05	1
Del_4p16.1	Del_5q12.1	6.23e-05	1
7q-Amp	Amp_20q13.12	6.25e-10	1
Amp_20p11.21	Del_8p22	6.28e-05	1
14q-Del	Del_15q11.2	6.2e-08	1
Amp_13q12.13	Amp_13q22.1	6.2e-82	1
14q-Del	Amp_20q12	6.35e-10	1
Amp_20p12.1	Amp_20q11.21	6.36e-31	1
Del_21q11.2	Del_22q13.32	6.37e-05	1
13q-Amp	Del_18q22.1	6.38e-10	1
17p-Del	Del_15q21.1	6.39e-13	1
18q-Del	4p-Del	6.3e-08	1
RNF43	ALPK2	6.44e-07	1
Del_8q11.1	Del_18q22.1	6.45e-05	1
RNF43	BCORL1	6.45e-07	1
RNF43	SLC12A6	6.45e-07	1
C11orf30	BMPR2	6.47e-07	1
4q-Del	Del_4p16.1	6.47e-19	1
14q-Del	Del_17p12	6.49e-15	1
Amp_13q22.1	Del_14q11.2	6.51e-08	1
MAPK6	ROS1	6.52e-05	1
PRKDC	SLC12A6	6.52e-05	1
ROS1	BMPR2	6.52e-07	1
Del_15q11.2	Del_18q21.2	6.52e-22	1
14q-Del	Del_4q35.1	6.53e-07	1
Amp_8p11.21	Amp_20q13.12	6.53e-08	1
SMAD4	PTEN	6.53e-09	1
4p-Del	Del_18q22.1	6.5e-10	1
Amp_13q22.1	Del_18q12.2	6.61e-12	1
4q-Del	Del_1p13.2	6.62e-05	1
18q-Del	Del_1p13.2	6.64e-09	1
Del_18q21.2	Del_21q21.1	6.68e-08	1
Amp_20q11.21	Amp_20q12	6.69e-119	1
NF1	DDX26B	6.6e-05	1
Del_18q21.2	Del_19p13.3	6.6e-05	1
Del_5q23.3	Del_18q21.2	6.6e-08	1
18q-Del	Amp_13q12.13	6.71e-12	1
Del_14q11.2	Del_15q15.2	6.72e-07	1
PTCH1	CTNNB1	6.73e-07	1
Amp_20q13.12	Del_18p11.31	6.73e-26	1
MAPK6	RB1	6.77e-06	1
Del_18q22.1	Del_22q13.32	6.79e-14	1
Del_14q11.2	Del_18q22.1	6.79e-21	1
PLAGL2	TOP2B	6.7e-05	1
Del_17q24.3	Del_18q21.2	6.7e-05	1
Amp_20q13.12	Del_17p12	6.7e-13	1
FAM123B	BMPR2	6.84e-05	1
TOP2B	HLA-A	6.85e-05	1
7p-Amp	Del_18q22.1	6.87e-05	1
16p-Amp	Amp_16p11.2	6.87e-22	1
RB1	ATM	6.88e-12	1
8q-Amp	Amp_20q13.12	6.93e-08	1
Del_5q23.3	Del_8p22	6.94e-06	1
FMN2	MAP4K3	6.96e-05	1
SLC12A6	CREBBP	6.96e-06	1
18q-Del	Del_18q22.1	6.96e-110	1
18q-Del	4q-Del	6.99e-10	1
22q-Del	Del_21q21.1	6e-04	1
Del_17p12	Del_22q13.32	6e-09	1
21q-Del	Del_21q21.1	6e-54	1
ROS1	ALDH1A3	7.01e-06	1
Del_18q22.1	Del_21q21.1	7.02e-09	1
Del_15q15.2	Del_18q22.1	7.02e-22	1
PRKDC	DIP2B	7.03e-05	1
HLA-A	GPATCH8	7.07e-05	1
Amp_20q13.12	Del_15q11.2	7.11e-07	1
Del_15q15.2	Del_15q21.1	7.11e-79	1
PRKDC	SLC26A8	7.12e-05	1
Del_10q25.2	Del_18q22.1	7.13e-05	1
Del_15q21.1	Del_18q12.2	7.13e-17	1
15q-Del	Amp_13q12.13	7.15e-05	1
4q-Del	Del_17q24.3	7.17e-05	1
18p-Del	Del_1p13.2	7.17e-07	1
16q-Amp	18q-Del	7.18e-05	1
12p-Amp	12q-Amp	7.18e-37	1
20p-Amp	Amp_13q12.13	7.19e-07	1
Amp_13q12.13	Del_8p23.2	7.19e-07	1
1p-Del	Del_1p13.2	7.25e-17	1
Del_15q15.2	Del_18q12.2	7.26e-20	1
PRKDC	CDK12	7.28e-07	1
FBXW7	ATM	7.29e-06	1
Del_5q23.3	Del_17p12	7.29e-07	1
Del_5q22.2	Del_17p12	7.2e-05	1
18q-Del	Del_18p11.31	7.31e-71	1
Amp_20p11.21	Del_8p23.2	7.32e-05	1
1p-Del	Del_1p36.11	7.32e-16	1
Del_21q11.2	Del_21q21.1	7.34e-55	1
NF2	SMAD4	7.35e-06	1
Del_4q22.1	Del_5q23.3	7.36e-05	1
Del_4q35.1	Del_14q11.2	7.36e-05	1
Amp_8p11.23	Amp_20q11.21	7.37e-06	1
Del_4q22.1	Del_10q21.1	7.37e-06	1
Amp_13q12.2	Del_15q11.2	7.37e-07	1
Del_4q22.1	Del_8p23.2	7.39e-08	1
18p-Del	Del_18q12.2	7.3e-82	1
Del_5q12.1	Del_17p12	7.43e-05	1
Amp_13q22.1	Del_15q11.2	7.44e-05	1
Del_4p16.1	Del_17p12	7.44e-07	1
ALPK2	ROS1	7.48e-06	1
Amp_20q11.21	Del_1p36.11	7.49e-05	1
Del_18q12.2	Del_18q21.2	7.49e-117	1
20q-Amp	Amp_20q12	7.4e-116	1
PLAGL2	RB1	7.51e-05	1
CHUK	ROS1	7.53e-06	1
17p-Del	Del_12p13.1	7.55e-06	1
Del_14q11.2	Del_17p12	7.55e-17	1
Amp_13q22.1	Del_8p23.2	7.56e-08	1
Amp_13q12.13	Amp_20q11.21	7.56e-17	1
18p-Del	Del_18q22.1	7.56e-82	1
Del_6q26	Del_18q21.2	7.57e-06	1
MGA	SLC26A8	7.59e-05	1
MVK	BMPR2	7.59e-07	1
14q-Del	15q-Del	7.59e-07	1
2q-Amp	Amp_11p15.5	7.61e-06	1
Del_14q11.2	Del_18q12.2	7.61e-23	1
8q-Amp	Amp_20q12	7.62e-08	1
18q-Del	Amp_8q24.21	7.65e-05	1
Amp_13q12.13	Del_4q35.1	7.66e-06	1
4p-Del	4q-Del	7.66e-34	1
21q-Del	Del_21q11.2	7.66e-45	1
21q-Del	Del_18q21.2	7.69e-06	1
Del_5q21.2	Del_18q21.2	7.69e-06	1
20q-Amp	7p-Amp	7.6e-12	1
Amp_13q12.2	Del_4q35.1	7.72e-06	1
14q-Del	Del_21q21.1	7.73e-05	1
20q-Amp	7q-Amp	7.78e-10	1
8p-Del	Del_15q11.2	7.79e-07	1
FBXW7	BMPR2	7.7e-05	1
18q-Del	Del_15q15.2	7.81e-18	1
Del_5q21.2	Del_17p12	7.85e-05	1
SMAD4	ATM	7.86e-06	1
18p-Del	21q-Del	7.86e-07	1
Del_8q11.1	Del_18q21.2	7.88e-05	1
18q-Del	1p-Del	7.89e-05	1
DIP2B	L1TD1	7.8e-05	1
1p-Del	Del_1p33	7.91e-23	1
21q-Del	Del_18q12.2	7.93e-07	1
ALPK2	MPHOSPH10	7.97e-05	1
Del_10q23.31	Del_22q13.32	7.99e-05	1
4q-Del	Del_5q23.3	7.99e-06	1
20p-Amp	Amp_20q11.21	7.9e-51	1
ARID1A	MVK	7e-04	1
RNF43	MVK	7e-10	1
Amp_13q22.1	Amp_20q12	8.02e-16	1
20q-Amp	Amp_20p12.1	8.04e-34	1
TP53	Del_18p11.31	8.05e-06	1
13q-Amp	Del_18p11.31	8.09e-10	1
4q-Del	Del_15q22.33	8.12e-06	1
18q-Del	Del_5q22.2	8.13e-05	1
Del_17p12	Del_18q22.1	8.14e-46	1
14q-Del	Del_8p22	8.16e-07	1
15q-Del	Amp_20q12	8.17e-09	1
14q-Del	Del_22q13.32	8.19e-05	1
8q-Amp	Amp_8p11.23	8.19e-24	1
17p-Del	Del_21q21.1	8.1e-05	1
Del_12p13.1	Del_18q12.2	8.21e-06	1
Del_5q12.1	Del_5q23.3	8.21e-20	1
8p-Del	Del_18q12.2	8.24e-09	1
Del_4p16.1	Del_18q12.2	8.27e-08	1
4q-Del	8p-Del	8.2e-05	1
Del_17p12	Del_18q12.2	8.31e-44	1
CDH1	CTNNB1	8.32e-06	1
FKBP9	CDK12	8.36e-05	1
Del_4q22.1	Del_15q15.2	8.37e-06	1
Del_1p13.2	Del_21q21.1	8.38e-05	1
7p-Amp	Amp_8p11.23	8.39e-07	1
PTCH1	PIK3R1	8.3e-05	1
2p-Amp	Amp_17q24.1	8.41e-05	1
2q-Amp	Amp_17q24.1	8.41e-05	1
Amp_20q13.12	Del_1p36.11	8.41e-05	1
17p-Del	Del_15q22.33	8.42e-10	1
PRKDC	FKBP9	8.43e-06	1
Amp_13q12.2	Amp_13q22.1	8.43e-91	1
RB1	PTEN	8.44e-13	1
Amp_13q12.13	Del_18q22.1	8.45e-11	1
Del_1p36.11	Del_1p13.2	8.46e-13	1
16q-Amp	Amp_16p11.2	8.46e-19	1
Del_15q15.2	Del_22q13.32	8.48e-08	1
Del_5q12.1	Del_5q21.2	8.48e-19	1
Del_5q22.2	Del_18q12.2	8.52e-06	1
14q-Del	Amp_13q12.2	8.53e-08	1
Del_4q22.1	Del_15q11.2	8.53e-08	1
12q-Amp	Amp_19q12	8.56e-06	1
17p-Del	4p-Del	8.5e-09	1
4q-Del	Del_5q12.1	8.62e-05	1
18p-Del	Del_21q11.2	8.68e-10	1
Del_8p23.2	Del_18q21.2	8.6e-16	1
15q-Del	Del_18q22.1	8.6e-23	1
5q-Del	Del_18q22.1	8.74e-05	1
MAPK6	PRRG1	8.76e-05	1
NF1	TOP2B	8.78e-05	1
RNF43	PRRG1	8.78e-06	1
Del_14q11.2	Del_18q21.2	8.79e-22	1
ST3GAL6	ROS1	8.81e-05	1
NLRC4	PIK3R1	8.81e-05	1
12p-Amp	7q-Amp	8.82e-05	1
Amp_13q22.1	Del_4q35.1	8.85e-05	1
ALPK2	PTEN	8.8e-05	1
Del_18q12.2	Del_21q11.2	8.8e-10	1
Amp_20q12	Del_14q11.2	8.91e-10	1
OR4D10	PRKDC	8.94e-06	1
Del_8p22	Del_15q22.33	8.94e-07	1
Amp_17q12	Amp_20p11.21	8e-04	1
8p-Del	Amp_20q13.12	9.02e-05	1
15q-Del	Del_22q13.32	9.02e-09	1
CDH1	ROS1	9.03e-05	1
Del_21q21.1	Del_22q13.32	9.03e-06	1
Amp_8q24.21	Del_18q12.2	9.11e-05	1
13q-Amp	16q-Amp	9.12e-05	1
Del_15q22.33	Del_18q22.1	9.13e-25	1
ZBTB20	DDX26B	9.15e-07	1
14q-Del	Amp_13q12.13	9.15e-10	1
20p-Del	Del_18q22.1	9.17e-09	1
22q-Del	Del_15q11.2	9.19e-08	1
Del_4p16.1	Del_15q11.2	9.19e-08	1
14q-Del	Del_15q22.33	9.21e-07	1
PRKDC	C11orf30	9.22e-05	1
Amp_20q11.21	Del_18q21.2	9.22e-17	1
22q-Del	Del_10q23.31	9.23e-05	1
4p-Del	Del_21q11.2	9.23e-05	1
HLA-A	ATM	9.23e-08	1
Del_5q23.3	Del_8p23.2	9.25e-06	1
PRKDC	NF1	9.31e-08	1
Amp_8q24.21	Del_17p12	9.33e-05	1
NF2	PIK3R1	9.33e-07	1
Amp_20q12	Del_15q21.1	9.34e-05	1
Del_18p11.31	Del_22q13.32	9.3e-05	1
17p-Del	Del_1p36.11	9.3e-07	1
7p-Amp	Amp_13q22.1	9.3e-13	1
Del_15q11.2	Del_15q21.1	9.3e-56	1
1p-Del	4p-Del	9.42e-05	1
20p-Amp	18p-Del	9.43e-07	1
Del_8p23.2	Del_18p11.31	9.44e-09	1
RNF43	PTCH1	9.47e-05	1
NF1	SLC12A6	9.47e-06	1
ALPK2	PRRG1	9.49e-05	1
PRKDC	ROS1	9.49e-08	1
TP53	20q-Amp	9.4e-09	1
BCOR	BMPR2	9.55e-05	1
BMPR2	LARP4B	9.55e-05	1
Amp_20q11.21	Del_15q22.33	9.55e-09	1
18q-Del	Del_15q22.33	9.57e-20	1
PRKDC	CTNNB1	9.61e-06	1
ARID1A	RPTN	9.63e-05	1
Del_8q11.1	Del_15q11.2	9.63e-05	1
MLH1	NLRC4	9.63e-06	1
17p-Del	Del_18q12.2	9.63e-39	1
Del_10q25.2	Del_18q21.2	9.64e-05	1
18p-Del	18q-Del	9.64e-94	1
4q-Del	Del_1p33	9.66e-05	1
TPRKB	ATM	9.66e-06	1
Amp_8p11.21	Amp_20q11.21	9.67e-06	1
20q-Amp	Amp_8p11.21	9.68e-06	1
5q-Del	Del_8p22	9.72e-05	1
20q-Amp	Del_15q22.33	9.72e-06	1
NF2	TOP2B	9.73e-05	1
20p-Amp	Amp_8q24.21	9.73e-05	1
20q-Amp	Amp_8p11.23	9.73e-05	1
17p-Del	Del_14q11.2	9.74e-14	1
TP53	Amp_13q12.13	9.7e-05	1
MLH1	CTNNB1	9.83e-06	1
12p-Amp	Amp_19q12	9.85e-05	1
18q-Del	Del_14q11.2	9.91e-22	1
4q-Del	Del_10q21.1	9.92e-05	1
PRKDC	BCL9	9.94e-06	1
Amp_13q12.13	Del_15q11.2	9.96e-06	1
Del_10q25.2	Del_15q21.1	9.97e-05	1
17p-Del	Del_19p13.3	9.98e-08	1
FAM123B	ALPK2	9.99e-05	1
B2M	CREBBP	9e-04	1
HLA-A	CREBBP	9e-04	1
Del_8q11.1	Del_15q22.33	9e-04	1
14q-Del	4q-Del	9e-05	1
