[1] "ofn"          "-oTGBMLGG-TP"
[1] "opt"       "-OPMUTSIG"
[1] "tl" ""  
[1] "dx" ""  
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/GBMLGG-TP/22573865/GBMLGG-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/GBMLGG-TP/22818079/transformed.cor.cli.txt"

nPatients in clinical file=1114, in cluster file=799, common to both=799
[1] 171 799
[1] "IDH1 MUTATION ANALYSIS"
[1] 3
  IDH1 MUTATED IDH1 WILD-TYPE 
           415            384 
  IDH1 MUTATED IDH1 WILD-TYPE 
           415            384 
[1] "TP53 MUTATION ANALYSIS"
[1] 3
  TP53 MUTATED TP53 WILD-TYPE 
           331            468 
  TP53 MUTATED TP53 WILD-TYPE 
           331            468 
[1] "ATRX MUTATION ANALYSIS"
[1] 3
  ATRX MUTATED ATRX WILD-TYPE 
           214            585 
  ATRX MUTATED ATRX WILD-TYPE 
           214            585 
[1] "CIC MUTATION ANALYSIS"
[1] 3
  CIC MUTATED CIC WILD-TYPE 
          109           690 
  CIC MUTATED CIC WILD-TYPE 
          109           690 
[1] "NF1 MUTATION ANALYSIS"
[1] 3
  NF1 MUTATED NF1 WILD-TYPE 
           62           737 
  NF1 MUTATED NF1 WILD-TYPE 
           62           737 
[1] "PIK3R1 MUTATION ANALYSIS"
[1] 3
  PIK3R1 MUTATED PIK3R1 WILD-TYPE 
              54              745 
  PIK3R1 MUTATED PIK3R1 WILD-TYPE 
              54              745 
[1] "NOTCH1 MUTATION ANALYSIS"
[1] 3
  NOTCH1 MUTATED NOTCH1 WILD-TYPE 
              42              757 
  NOTCH1 MUTATED NOTCH1 WILD-TYPE 
              42              757 
[1] "IDH2 MUTATION ANALYSIS"
[1] 3
  IDH2 MUTATED IDH2 WILD-TYPE 
            20            779 
  IDH2 MUTATED IDH2 WILD-TYPE 
            20            779 
[1] "TCF12 MUTATION ANALYSIS"
[1] 3
  TCF12 MUTATED TCF12 WILD-TYPE 
             19             780 
  TCF12 MUTATED TCF12 WILD-TYPE 
             19             780 
[1] "PIK3CA MUTATION ANALYSIS"
[1] 3
  PIK3CA MUTATED PIK3CA WILD-TYPE 
              71              728 
  PIK3CA MUTATED PIK3CA WILD-TYPE 
              71              728 
[1] "RB1 MUTATION ANALYSIS"
[1] 3
  RB1 MUTATED RB1 WILD-TYPE 
           30           769 
  RB1 MUTATED RB1 WILD-TYPE 
           30           769 
[1] "FUBP1 MUTATION ANALYSIS"
[1] 3
  FUBP1 MUTATED FUBP1 WILD-TYPE 
             47             752 
  FUBP1 MUTATED FUBP1 WILD-TYPE 
             47             752 
[1] "PTEN MUTATION ANALYSIS"
[1] 3
  PTEN MUTATED PTEN WILD-TYPE 
           111            688 
  PTEN MUTATED PTEN WILD-TYPE 
           111            688 
[1] "STK19 MUTATION ANALYSIS"
[1] 3
  STK19 MUTATED STK19 WILD-TYPE 
             11             788 
  STK19 MUTATED STK19 WILD-TYPE 
             11             788 
[1] "ZMIZ1 MUTATION ANALYSIS"
[1] 3
  ZMIZ1 MUTATED ZMIZ1 WILD-TYPE 
             13             786 
  ZMIZ1 MUTATED ZMIZ1 WILD-TYPE 
             13             786 
[1] "ARID1A MUTATION ANALYSIS"
[1] 3
  ARID1A MUTATED ARID1A WILD-TYPE 
              22              777 
  ARID1A MUTATED ARID1A WILD-TYPE 
              22              777 
[1] "NIPBL MUTATION ANALYSIS"
[1] 3
  NIPBL MUTATED NIPBL WILD-TYPE 
             20             779 
  NIPBL MUTATED NIPBL WILD-TYPE 
             20             779 
[1] "GAGE2A MUTATION ANALYSIS"
[1] 3
  GAGE2A MUTATED GAGE2A WILD-TYPE 
               8              791 
  GAGE2A MUTATED GAGE2A WILD-TYPE 
               8              791 
[1] "NUDT11 MUTATION ANALYSIS"
[1] 3
  NUDT11 MUTATED NUDT11 WILD-TYPE 
              11              788 
  NUDT11 MUTATED NUDT11 WILD-TYPE 
              11              788 
[1] "CREBZF MUTATION ANALYSIS"
[1] 3
  CREBZF MUTATED CREBZF WILD-TYPE 
               9              790 
  CREBZF MUTATED CREBZF WILD-TYPE 
               9              790 
[1] "SLC26A3 MUTATION ANALYSIS"
[1] 3
  SLC26A3 MUTATED SLC26A3 WILD-TYPE 
               11               788 
  SLC26A3 MUTATED SLC26A3 WILD-TYPE 
               11               788 
[1] "PLCG1 MUTATION ANALYSIS"
[1] 3
  PLCG1 MUTATED PLCG1 WILD-TYPE 
             11             788 
  PLCG1 MUTATED PLCG1 WILD-TYPE 
             11             788 
[1] "SEMG1 MUTATION ANALYSIS"
[1] 3
  SEMG1 MUTATED SEMG1 WILD-TYPE 
             11             788 
  SEMG1 MUTATED SEMG1 WILD-TYPE 
             11             788 
[1] "NUP210L MUTATION ANALYSIS"
[1] 3
  NUP210L MUTATED NUP210L WILD-TYPE 
               12               787 
  NUP210L MUTATED NUP210L WILD-TYPE 
               12               787 
[1] "PDGFRA MUTATION ANALYSIS"
[1] 3
  PDGFRA MUTATED PDGFRA WILD-TYPE 
              21              778 
  PDGFRA MUTATED PDGFRA WILD-TYPE 
              21              778 
[1] "STAG2 MUTATION ANALYSIS"
[1] 3
  STAG2 MUTATED STAG2 WILD-TYPE 
             16             783 
  STAG2 MUTATED STAG2 WILD-TYPE 
             16             783 
[1] "MED9 MUTATION ANALYSIS"
[1] 3
  MED9 MUTATED MED9 WILD-TYPE 
             3            796 
  MED9 MUTATED MED9 WILD-TYPE 
             3            796 
[1] "NKD2 MUTATION ANALYSIS"
[1] 3
  NKD2 MUTATED NKD2 WILD-TYPE 
             4            795 
  NKD2 MUTATED NKD2 WILD-TYPE 
             4            795 
[1] "IRS4 MUTATION ANALYSIS"
[1] 3
  IRS4 MUTATED IRS4 WILD-TYPE 
            11            788 
  IRS4 MUTATED IRS4 WILD-TYPE 
            11            788 
[1] "REN MUTATION ANALYSIS"
[1] 3
  REN MUTATED REN WILD-TYPE 
            7           792 
  REN MUTATED REN WILD-TYPE 
            7           792 
[1] "MUC17 MUTATION ANALYSIS"
[1] 3
  MUC17 MUTATED MUC17 WILD-TYPE 
             50             749 
  MUC17 MUTATED MUC17 WILD-TYPE 
             50             749 
[1] "HTRA2 MUTATION ANALYSIS"
[1] 3
  HTRA2 MUTATED HTRA2 WILD-TYPE 
              5             794 
  HTRA2 MUTATED HTRA2 WILD-TYPE 
              5             794 
[1] "RPL5 MUTATION ANALYSIS"
[1] 3
  RPL5 MUTATED RPL5 WILD-TYPE 
            10            789 
  RPL5 MUTATED RPL5 WILD-TYPE 
            10            789 
[1] "BRAF MUTATION ANALYSIS"
[1] 3
  BRAF MUTATED BRAF WILD-TYPE 
            11            788 
  BRAF MUTATED BRAF WILD-TYPE 
            11            788 
[1] "KDR MUTATION ANALYSIS"
[1] 3
  KDR MUTATED KDR WILD-TYPE 
           13           786 
  KDR MUTATED KDR WILD-TYPE 
           13           786 
[1] "RBPJ MUTATION ANALYSIS"
[1] 3
  RBPJ MUTATED RBPJ WILD-TYPE 
             7            792 
  RBPJ MUTATED RBPJ WILD-TYPE 
             7            792 
[1] "NRAS MUTATION ANALYSIS"
[1] 3
  NRAS MUTATED NRAS WILD-TYPE 
             5            794 
  NRAS MUTATED NRAS WILD-TYPE 
             5            794 
[1] "TRERF1 MUTATION ANALYSIS"
[1] 3
  TRERF1 MUTATED TRERF1 WILD-TYPE 
               7              792 
  TRERF1 MUTATED TRERF1 WILD-TYPE 
               7              792 
[1] "BCOR MUTATION ANALYSIS"
[1] 3
  BCOR MUTATED BCOR WILD-TYPE 
            22            777 
  BCOR MUTATED BCOR WILD-TYPE 
            22            777 
[1] "PTPN11 MUTATION ANALYSIS"
[1] 3
  PTPN11 MUTATED PTPN11 WILD-TYPE 
              11              788 
  PTPN11 MUTATED PTPN11 WILD-TYPE 
              11              788 
[1] "MX2 MUTATION ANALYSIS"
[1] 3
  MX2 MUTATED MX2 WILD-TYPE 
            9           790 
  MX2 MUTATED MX2 WILD-TYPE 
            9           790 
[1] "FAM47C MUTATION ANALYSIS"
[1] 3
  FAM47C MUTATED FAM47C WILD-TYPE 
              24              775 
  FAM47C MUTATED FAM47C WILD-TYPE 
              24              775 
[1] "DDX5 MUTATION ANALYSIS"
[1] 3
  DDX5 MUTATED DDX5 WILD-TYPE 
             9            790 
  DDX5 MUTATED DDX5 WILD-TYPE 
             9            790 
[1] "SETD2 MUTATION ANALYSIS"
[1] 3
  SETD2 MUTATED SETD2 WILD-TYPE 
             13             786 
  SETD2 MUTATED SETD2 WILD-TYPE 
             13             786 
[1] "ZNF709 MUTATION ANALYSIS"
[1] 3
  ZNF709 MUTATED ZNF709 WILD-TYPE 
               5              794 
  ZNF709 MUTATED ZNF709 WILD-TYPE 
               5              794 
[1] "FAM126B MUTATION ANALYSIS"
[1] 3
  FAM126B MUTATED FAM126B WILD-TYPE 
                8               791 
  FAM126B MUTATED FAM126B WILD-TYPE 
                8               791 
[1] "MYST4 MUTATION ANALYSIS"
[1] 3
  MYST4 MUTATED MYST4 WILD-TYPE 
             12             787 
  MYST4 MUTATED MYST4 WILD-TYPE 
             12             787 
[1] "TLR6 MUTATION ANALYSIS"
[1] 3
  TLR6 MUTATED TLR6 WILD-TYPE 
             8            791 
  TLR6 MUTATED TLR6 WILD-TYPE 
             8            791 
[1] "EGFR MUTATION ANALYSIS"
[1] 3
  EGFR MUTATED EGFR WILD-TYPE 
           109            690 
  EGFR MUTATED EGFR WILD-TYPE 
           109            690 
[1] "ACADS MUTATION ANALYSIS"
[1] 3
  ACADS MUTATED ACADS WILD-TYPE 
              5             794 
  ACADS MUTATED ACADS WILD-TYPE 
              5             794 
[1] "TNRC18 MUTATION ANALYSIS"
[1] 3
  TNRC18 MUTATED TNRC18 WILD-TYPE 
              12              787 
  TNRC18 MUTATED TNRC18 WILD-TYPE 
              12              787 
[1] "SLC6A3 MUTATION ANALYSIS"
[1] 3
  SLC6A3 MUTATED SLC6A3 WILD-TYPE 
              12              787 
  SLC6A3 MUTATED SLC6A3 WILD-TYPE 
              12              787 
[1] "ZNF292 MUTATION ANALYSIS"
[1] 3
  ZNF292 MUTATED ZNF292 WILD-TYPE 
              17              782 
  ZNF292 MUTATED ZNF292 WILD-TYPE 
              17              782 
[1] "ARID2 MUTATION ANALYSIS"
[1] 3
  ARID2 MUTATED ARID2 WILD-TYPE 
             13             786 
  ARID2 MUTATED ARID2 WILD-TYPE 
             13             786 
[1] "KRTAP5-3 MUTATION ANALYSIS"
[1] 3
  KRTAP5-3 MUTATED KRTAP5-3 WILD-TYPE 
                 4                795 
  KRTAP5-3 MUTATED KRTAP5-3 WILD-TYPE 
                 4                795 
[1] "SRPX MUTATION ANALYSIS"
[1] 3
  SRPX MUTATED SRPX WILD-TYPE 
             4            795 
  SRPX MUTATED SRPX WILD-TYPE 
             4            795 
[1] "WRN MUTATION ANALYSIS"
[1] 3
  WRN MUTATED WRN WILD-TYPE 
            6           793 
  WRN MUTATED WRN WILD-TYPE 
            6           793 
[1] "NEU2 MUTATION ANALYSIS"
[1] 3
  NEU2 MUTATED NEU2 WILD-TYPE 
             9            790 
  NEU2 MUTATED NEU2 WILD-TYPE 
             9            790 
[1] "TMEM216 MUTATION ANALYSIS"
[1] 3
  TMEM216 MUTATED TMEM216 WILD-TYPE 
                3               796 
  TMEM216 MUTATED TMEM216 WILD-TYPE 
                3               796 
[1] "KTELC1 MUTATION ANALYSIS"
[1] 3
  KTELC1 MUTATED KTELC1 WILD-TYPE 
               5              794 
  KTELC1 MUTATED KTELC1 WILD-TYPE 
               5              794 
[1] "ZNF41 MUTATION ANALYSIS"
[1] 3
  ZNF41 MUTATED ZNF41 WILD-TYPE 
              8             791 
  ZNF41 MUTATED ZNF41 WILD-TYPE 
              8             791 
[1] "SOX4 MUTATION ANALYSIS"
[1] 3
  SOX4 MUTATED SOX4 WILD-TYPE 
             7            792 
  SOX4 MUTATED SOX4 WILD-TYPE 
             7            792 
[1] "SERPING1 MUTATION ANALYSIS"
[1] 3
  SERPING1 MUTATED SERPING1 WILD-TYPE 
                 4                795 
  SERPING1 MUTATED SERPING1 WILD-TYPE 
                 4                795 
[1] "RASGRF2 MUTATION ANALYSIS"
[1] 3
  RASGRF2 MUTATED RASGRF2 WILD-TYPE 
                6               793 
  RASGRF2 MUTATED RASGRF2 WILD-TYPE 
                6               793 
[1] "FAM83D MUTATION ANALYSIS"
[1] 3
  FAM83D MUTATED FAM83D WILD-TYPE 
               6              793 
  FAM83D MUTATED FAM83D WILD-TYPE 
               6              793 
[1] "ZNF512B MUTATION ANALYSIS"
[1] 3
  ZNF512B MUTATED ZNF512B WILD-TYPE 
                5               794 
  ZNF512B MUTATED ZNF512B WILD-TYPE 
                5               794 
[1] "ATF7IP2 MUTATION ANALYSIS"
[1] 3
  ATF7IP2 MUTATED ATF7IP2 WILD-TYPE 
                8               791 
  ATF7IP2 MUTATED ATF7IP2 WILD-TYPE 
                8               791 
[1] "TPX2 MUTATION ANALYSIS"
[1] 3
  TPX2 MUTATED TPX2 WILD-TYPE 
             7            792 
  TPX2 MUTATED TPX2 WILD-TYPE 
             7            792 
[1] "ZBTB20 MUTATION ANALYSIS"
[1] 3
  ZBTB20 MUTATED ZBTB20 WILD-TYPE 
              22              777 
  ZBTB20 MUTATED ZBTB20 WILD-TYPE 
              22              777 
[1] "C10ORF76 MUTATION ANALYSIS"
[1] 3
  C10ORF76 MUTATED C10ORF76 WILD-TYPE 
                 4                795 
  C10ORF76 MUTATED C10ORF76 WILD-TYPE 
                 4                795 
[1] "TRPV6 MUTATION ANALYSIS"
[1] 3
  TRPV6 MUTATED TRPV6 WILD-TYPE 
             13             786 
  TRPV6 MUTATED TRPV6 WILD-TYPE 
             13             786 
[1] "PDHA1 MUTATION ANALYSIS"
[1] 3
  PDHA1 MUTATED PDHA1 WILD-TYPE 
              6             793 
  PDHA1 MUTATED PDHA1 WILD-TYPE 
              6             793 
[1] "ZDHHC4 MUTATION ANALYSIS"
[1] 3
  ZDHHC4 MUTATED ZDHHC4 WILD-TYPE 
               4              795 
  ZDHHC4 MUTATED ZDHHC4 WILD-TYPE 
               4              795 
[1] "FAM123C MUTATION ANALYSIS"
[1] 3
  FAM123C MUTATED FAM123C WILD-TYPE 
               11               788 
  FAM123C MUTATED FAM123C WILD-TYPE 
               11               788 
[1] "CPEB4 MUTATION ANALYSIS"
[1] 3
  CPEB4 MUTATED CPEB4 WILD-TYPE 
              7             792 
  CPEB4 MUTATED CPEB4 WILD-TYPE 
              7             792 
[1] "EEF1A1 MUTATION ANALYSIS"
[1] 3
  EEF1A1 MUTATED EEF1A1 WILD-TYPE 
               8              791 
  EEF1A1 MUTATED EEF1A1 WILD-TYPE 
               8              791 
[1] "PROKR2 MUTATION ANALYSIS"
[1] 3
  PROKR2 MUTATED PROKR2 WILD-TYPE 
               9              790 
  PROKR2 MUTATED PROKR2 WILD-TYPE 
               9              790 
[1] "DNMT3A MUTATION ANALYSIS"
[1] 3
  DNMT3A MUTATED DNMT3A WILD-TYPE 
              11              788 
  DNMT3A MUTATED DNMT3A WILD-TYPE 
              11              788 
[1] "TMEM184A MUTATION ANALYSIS"
[1] 3
  TMEM184A MUTATED TMEM184A WILD-TYPE 
                 3                796 
  TMEM184A MUTATED TMEM184A WILD-TYPE 
                 3                796 
[1] "G6PC MUTATION ANALYSIS"
[1] 3
  G6PC MUTATED G6PC WILD-TYPE 
             7            792 
  G6PC MUTATED G6PC WILD-TYPE 
             7            792 
[1] "CYP11A1 MUTATION ANALYSIS"
[1] 3
  CYP11A1 MUTATED CYP11A1 WILD-TYPE 
                7               792 
  CYP11A1 MUTATED CYP11A1 WILD-TYPE 
                7               792 
[1] "KRT15 MUTATION ANALYSIS"
[1] 3
  KRT15 MUTATED KRT15 WILD-TYPE 
              8             791 
  KRT15 MUTATED KRT15 WILD-TYPE 
              8             791 
[1] "CMA1 MUTATION ANALYSIS"
[1] 3
  CMA1 MUTATED CMA1 WILD-TYPE 
             3            796 
  CMA1 MUTATED CMA1 WILD-TYPE 
             3            796 
[1] "MAP3K12 MUTATION ANALYSIS"
[1] 3
  MAP3K12 MUTATED MAP3K12 WILD-TYPE 
                6               793 
  MAP3K12 MUTATED MAP3K12 WILD-TYPE 
                6               793 
[1] "TREML2 MUTATION ANALYSIS"
[1] 3
  TREML2 MUTATED TREML2 WILD-TYPE 
               7              792 
  TREML2 MUTATED TREML2 WILD-TYPE 
               7              792 
[1] "PRCP MUTATION ANALYSIS"
[1] 3
  PRCP MUTATED PRCP WILD-TYPE 
             5            794 
  PRCP MUTATED PRCP WILD-TYPE 
             5            794 
[1] "ESR2 MUTATION ANALYSIS"
[1] 3
  ESR2 MUTATED ESR2 WILD-TYPE 
             6            793 
  ESR2 MUTATED ESR2 WILD-TYPE 
             6            793 
[1] "POM121 MUTATION ANALYSIS"
[1] 3
  POM121 MUTATED POM121 WILD-TYPE 
               6              793 
  POM121 MUTATED POM121 WILD-TYPE 
               6              793 
[1] "MACC1 MUTATION ANALYSIS"
[1] 3
  MACC1 MUTATED MACC1 WILD-TYPE 
              8             791 
  MACC1 MUTATED MACC1 WILD-TYPE 
              8             791 
[1] "QKI MUTATION ANALYSIS"
[1] 3
  QKI MUTATED QKI WILD-TYPE 
            6           793 
  QKI MUTATED QKI WILD-TYPE 
            6           793 
[1] "AOX1 MUTATION ANALYSIS"
[1] 3
  AOX1 MUTATED AOX1 WILD-TYPE 
             8            791 
  AOX1 MUTATED AOX1 WILD-TYPE 
             8            791 
[1] "KRAS MUTATION ANALYSIS"
[1] 3
  KRAS MUTATED KRAS WILD-TYPE 
             4            795 
  KRAS MUTATED KRAS WILD-TYPE 
             4            795 
[1] "TYRP1 MUTATION ANALYSIS"
[1] 3
  TYRP1 MUTATED TYRP1 WILD-TYPE 
              6             793 
  TYRP1 MUTATED TYRP1 WILD-TYPE 
              6             793 
[1] "EMG1 MUTATION ANALYSIS"
[1] 3
  EMG1 MUTATED EMG1 WILD-TYPE 
             5            794 
  EMG1 MUTATED EMG1 WILD-TYPE 
             5            794 
[1] "HEATR3 MUTATION ANALYSIS"
[1] 3
  HEATR3 MUTATED HEATR3 WILD-TYPE 
               4              795 
  HEATR3 MUTATED HEATR3 WILD-TYPE 
               4              795 
[1] "CDKN2A MUTATION ANALYSIS"
[1] 3
  CDKN2A MUTATED CDKN2A WILD-TYPE 
               6              793 
  CDKN2A MUTATED CDKN2A WILD-TYPE 
               6              793 
[1] "SLC35A2 MUTATION ANALYSIS"
[1] 3
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                3               796 
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                3               796 
[1] "MYH8 MUTATION ANALYSIS"
[1] 3
  MYH8 MUTATED MYH8 WILD-TYPE 
            21            778 
  MYH8 MUTATED MYH8 WILD-TYPE 
            21            778 
[1] "SMARCA4 MUTATION ANALYSIS"
[1] 3
  SMARCA4 MUTATED SMARCA4 WILD-TYPE 
               27               772 
  SMARCA4 MUTATED SMARCA4 WILD-TYPE 
               27               772 
[1] "DOCK5 MUTATION ANALYSIS"
[1] 3
  DOCK5 MUTATED DOCK5 WILD-TYPE 
             20             779 
  DOCK5 MUTATED DOCK5 WILD-TYPE 
             20             779 
[1] "PAK1 MUTATION ANALYSIS"
[1] 3
  PAK1 MUTATED PAK1 WILD-TYPE 
             3            796 
  PAK1 MUTATED PAK1 WILD-TYPE 
             3            796 
[1] "KRT13 MUTATION ANALYSIS"
[1] 3
  KRT13 MUTATED KRT13 WILD-TYPE 
              6             793 
  KRT13 MUTATED KRT13 WILD-TYPE 
              6             793 
[1] "MYO5A MUTATION ANALYSIS"
[1] 3
  MYO5A MUTATED MYO5A WILD-TYPE 
              5             794 
  MYO5A MUTATED MYO5A WILD-TYPE 
              5             794 
[1] "MORN5 MUTATION ANALYSIS"
[1] 3
  MORN5 MUTATED MORN5 WILD-TYPE 
              3             796 
  MORN5 MUTATED MORN5 WILD-TYPE 
              3             796 
[1] "KRT3 MUTATION ANALYSIS"
[1] 3
  KRT3 MUTATED KRT3 WILD-TYPE 
             4            795 
  KRT3 MUTATED KRT3 WILD-TYPE 
             4            795 
[1] "LGALS13 MUTATION ANALYSIS"
[1] 3
  LGALS13 MUTATED LGALS13 WILD-TYPE 
                4               795 
  LGALS13 MUTATED LGALS13 WILD-TYPE 
                4               795 
[1] "CD44 MUTATION ANALYSIS"
[1] 3
  CD44 MUTATED CD44 WILD-TYPE 
             6            793 
  CD44 MUTATED CD44 WILD-TYPE 
             6            793 
[1] "GRHL3 MUTATION ANALYSIS"
[1] 3
  GRHL3 MUTATED GRHL3 WILD-TYPE 
              8             791 
  GRHL3 MUTATED GRHL3 WILD-TYPE 
              8             791 
[1] "CD1D MUTATION ANALYSIS"
[1] 3
  CD1D MUTATED CD1D WILD-TYPE 
             4            795 
  CD1D MUTATED CD1D WILD-TYPE 
             4            795 
[1] "CNOT1 MUTATION ANALYSIS"
[1] 3
  CNOT1 MUTATED CNOT1 WILD-TYPE 
              8             791 
  CNOT1 MUTATED CNOT1 WILD-TYPE 
              8             791 
[1] "NAP1L2 MUTATION ANALYSIS"
[1] 3
  NAP1L2 MUTATED NAP1L2 WILD-TYPE 
               6              793 
  NAP1L2 MUTATED NAP1L2 WILD-TYPE 
               6              793 
[1] "OR52M1 MUTATION ANALYSIS"
[1] 3
  OR52M1 MUTATED OR52M1 WILD-TYPE 
               8              791 
  OR52M1 MUTATED OR52M1 WILD-TYPE 
               8              791 
[1] "OAS2 MUTATION ANALYSIS"
[1] 3
  OAS2 MUTATED OAS2 WILD-TYPE 
             4            795 
  OAS2 MUTATED OAS2 WILD-TYPE 
             4            795 
[1] "FMR1 MUTATION ANALYSIS"
[1] 3
  FMR1 MUTATED FMR1 WILD-TYPE 
             5            794 
  FMR1 MUTATED FMR1 WILD-TYPE 
             5            794 
[1] "INF2 MUTATION ANALYSIS"
[1] 3
  INF2 MUTATED INF2 WILD-TYPE 
             4            795 
  INF2 MUTATED INF2 WILD-TYPE 
             4            795 
[1] "EPS8L1 MUTATION ANALYSIS"
[1] 3
  EPS8L1 MUTATED EPS8L1 WILD-TYPE 
               4              795 
  EPS8L1 MUTATED EPS8L1 WILD-TYPE 
               4              795 
[1] "CD209 MUTATION ANALYSIS"
[1] 3
  CD209 MUTATED CD209 WILD-TYPE 
             10             789 
  CD209 MUTATED CD209 WILD-TYPE 
             10             789 
[1] "TNFRSF9 MUTATION ANALYSIS"
[1] 3
  TNFRSF9 MUTATED TNFRSF9 WILD-TYPE 
                4               795 
  TNFRSF9 MUTATED TNFRSF9 WILD-TYPE 
                4               795 
[1] "PRG4 MUTATION ANALYSIS"
[1] 3
  PRG4 MUTATED PRG4 WILD-TYPE 
            10            789 
  PRG4 MUTATED PRG4 WILD-TYPE 
            10            789 
[1] "RFX4 MUTATION ANALYSIS"
[1] 3
  RFX4 MUTATED RFX4 WILD-TYPE 
             6            793 
  RFX4 MUTATED RFX4 WILD-TYPE 
             6            793 
[1] "LUM MUTATION ANALYSIS"
[1] 3
  LUM MUTATED LUM WILD-TYPE 
            7           792 
  LUM MUTATED LUM WILD-TYPE 
            7           792 
[1] "MYT1 MUTATION ANALYSIS"
[1] 3
  MYT1 MUTATED MYT1 WILD-TYPE 
             6            793 
  MYT1 MUTATED MYT1 WILD-TYPE 
             6            793 
[1] "KCNJ15 MUTATION ANALYSIS"
[1] 3
  KCNJ15 MUTATED KCNJ15 WILD-TYPE 
               4              795 
  KCNJ15 MUTATED KCNJ15 WILD-TYPE 
               4              795 
[1] "GFRA4 MUTATION ANALYSIS"
[1] 3
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              3             796 
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              3             796 
[1] "DLC1 MUTATION ANALYSIS"
[1] 3
  DLC1 MUTATED DLC1 WILD-TYPE 
             9            790 
  DLC1 MUTATED DLC1 WILD-TYPE 
             9            790 
[1] "TMPRSS6 MUTATION ANALYSIS"
[1] 3
  TMPRSS6 MUTATED TMPRSS6 WILD-TYPE 
                9               790 
  TMPRSS6 MUTATED TMPRSS6 WILD-TYPE 
                9               790 
[1] "DLX6 MUTATION ANALYSIS"
[1] 3
  DLX6 MUTATED DLX6 WILD-TYPE 
             5            794 
  DLX6 MUTATED DLX6 WILD-TYPE 
             5            794 
[1] "MAP3K1 MUTATION ANALYSIS"
[1] 3
  MAP3K1 MUTATED MAP3K1 WILD-TYPE 
               9              790 
  MAP3K1 MUTATED MAP3K1 WILD-TYPE 
               9              790 
[1] "ROBO3 MUTATION ANALYSIS"
[1] 3
  ROBO3 MUTATED ROBO3 WILD-TYPE 
              5             794 
  ROBO3 MUTATED ROBO3 WILD-TYPE 
              5             794 
[1] "SGOL2 MUTATION ANALYSIS"
[1] 3
  SGOL2 MUTATED SGOL2 WILD-TYPE 
              9             790 
  SGOL2 MUTATED SGOL2 WILD-TYPE 
              9             790 
[1] "HTT MUTATION ANALYSIS"
[1] 3
  HTT MUTATED HTT WILD-TYPE 
            5           794 
  HTT MUTATED HTT WILD-TYPE 
            5           794 
[1] "SON MUTATION ANALYSIS"
[1] 3
  SON MUTATED SON WILD-TYPE 
            9           790 
  SON MUTATED SON WILD-TYPE 
            9           790 
[1] "PLXNA3 MUTATION ANALYSIS"
[1] 3
  PLXNA3 MUTATED PLXNA3 WILD-TYPE 
              10              789 
  PLXNA3 MUTATED PLXNA3 WILD-TYPE 
              10              789 
[1] "PASD1 MUTATION ANALYSIS"
[1] 3
  PASD1 MUTATED PASD1 WILD-TYPE 
              8             791 
  PASD1 MUTATED PASD1 WILD-TYPE 
              8             791 
[1] "AMPD1 MUTATION ANALYSIS"
[1] 3
  AMPD1 MUTATED AMPD1 WILD-TYPE 
              7             792 
  AMPD1 MUTATED AMPD1 WILD-TYPE 
              7             792 
[1] "TNFSF9 MUTATION ANALYSIS"
[1] 3
  TNFSF9 MUTATED TNFSF9 WILD-TYPE 
               5              794 
  TNFSF9 MUTATED TNFSF9 WILD-TYPE 
               5              794 
[1] "IL4R MUTATION ANALYSIS"
[1] 3
  IL4R MUTATED IL4R WILD-TYPE 
            10            789 
  IL4R MUTATED IL4R WILD-TYPE 
            10            789 
[1] "TJAP1 MUTATION ANALYSIS"
[1] 3
  TJAP1 MUTATED TJAP1 WILD-TYPE 
              3             796 
  TJAP1 MUTATED TJAP1 WILD-TYPE 
              3             796 
[1] "KLKB1 MUTATION ANALYSIS"
[1] 3
  KLKB1 MUTATED KLKB1 WILD-TYPE 
              7             792 
  KLKB1 MUTATED KLKB1 WILD-TYPE 
              7             792 
[1] "CHGB MUTATION ANALYSIS"
[1] 3
  CHGB MUTATED CHGB WILD-TYPE 
             8            791 
  CHGB MUTATED CHGB WILD-TYPE 
             8            791 
[1] "GABRA6 MUTATION ANALYSIS"
[1] 3
  GABRA6 MUTATED GABRA6 WILD-TYPE 
              15              784 
  GABRA6 MUTATED GABRA6 WILD-TYPE 
              15              784 
[1] "ALPK3 MUTATION ANALYSIS"
[1] 3
  ALPK3 MUTATED ALPK3 WILD-TYPE 
              4             795 
  ALPK3 MUTATED ALPK3 WILD-TYPE 
              4             795 
[1] "MYO1B MUTATION ANALYSIS"
[1] 3
  MYO1B MUTATED MYO1B WILD-TYPE 
             11             788 
  MYO1B MUTATED MYO1B WILD-TYPE 
             11             788 
[1] "SMOC1 MUTATION ANALYSIS"
[1] 3
  SMOC1 MUTATED SMOC1 WILD-TYPE 
              4             795 
  SMOC1 MUTATED SMOC1 WILD-TYPE 
              4             795 
[1] "ACSM1 MUTATION ANALYSIS"
[1] 3
  ACSM1 MUTATED ACSM1 WILD-TYPE 
              7             792 
  ACSM1 MUTATED ACSM1 WILD-TYPE 
              7             792 
[1] "CIB1 MUTATION ANALYSIS"
[1] 3
  CIB1 MUTATED CIB1 WILD-TYPE 
             5            794 
  CIB1 MUTATED CIB1 WILD-TYPE 
             5            794 
[1] "CDA MUTATION ANALYSIS"
[1] 3
  CDA MUTATED CDA WILD-TYPE 
            3           796 
  CDA MUTATED CDA WILD-TYPE 
            3           796 
[1] "TTC30B MUTATION ANALYSIS"
[1] 3
  TTC30B MUTATED TTC30B WILD-TYPE 
               7              792 
  TTC30B MUTATED TTC30B WILD-TYPE 
               7              792 
[1] "AGXT2L1 MUTATION ANALYSIS"
[1] 3
  AGXT2L1 MUTATED AGXT2L1 WILD-TYPE 
                4               795 
  AGXT2L1 MUTATED AGXT2L1 WILD-TYPE 
                4               795 
[1] "PRKCD MUTATION ANALYSIS"
[1] 3
  PRKCD MUTATED PRKCD WILD-TYPE 
              3             796 
  PRKCD MUTATED PRKCD WILD-TYPE 
              3             796 
[1] "ST3GAL6 MUTATION ANALYSIS"
[1] 3
  ST3GAL6 MUTATED ST3GAL6 WILD-TYPE 
                5               794 
  ST3GAL6 MUTATED ST3GAL6 WILD-TYPE 
                5               794 
[1] "SOX13 MUTATION ANALYSIS"
[1] 3
  SOX13 MUTATED SOX13 WILD-TYPE 
              5             794 
  SOX13 MUTATED SOX13 WILD-TYPE 
              5             794 
[1] "NKX2-2 MUTATION ANALYSIS"
[1] 3
  NKX2-2 MUTATED NKX2-2 WILD-TYPE 
               6              793 
  NKX2-2 MUTATED NKX2-2 WILD-TYPE 
               6              793 
[1] "SYBU MUTATION ANALYSIS"
[1] 3
  SYBU MUTATED SYBU WILD-TYPE 
             3            796 
  SYBU MUTATED SYBU WILD-TYPE 
             3            796 
[1] "WDR90 MUTATION ANALYSIS"
[1] 3
  WDR90 MUTATED WDR90 WILD-TYPE 
              9             790 
  WDR90 MUTATED WDR90 WILD-TYPE 
              9             790 
[1] "TP63 MUTATION ANALYSIS"
[1] 3
  TP63 MUTATED TP63 WILD-TYPE 
            10            789 
  TP63 MUTATED TP63 WILD-TYPE 
            10            789 
[1] "AK7 MUTATION ANALYSIS"
[1] 3
  AK7 MUTATED AK7 WILD-TYPE 
            9           790 
  AK7 MUTATED AK7 WILD-TYPE 
            9           790 
[1] "SLC2A3 MUTATION ANALYSIS"
[1] 3
  SLC2A3 MUTATED SLC2A3 WILD-TYPE 
               5              794 
  SLC2A3 MUTATED SLC2A3 WILD-TYPE 
               5              794 
[1] "DSP MUTATION ANALYSIS"
[1] 3
  DSP MUTATED DSP WILD-TYPE 
           21           778 
  DSP MUTATED DSP WILD-TYPE 
           21           778 
[1] "EGR1 MUTATION ANALYSIS"
[1] 3
  EGR1 MUTATED EGR1 WILD-TYPE 
             5            794 
  EGR1 MUTATED EGR1 WILD-TYPE 
             5            794 
[1] "PRB3 MUTATION ANALYSIS"
[1] 3
  PRB3 MUTATED PRB3 WILD-TYPE 
             3            796 
  PRB3 MUTATED PRB3 WILD-TYPE 
             3            796 
[1] "FBN3 MUTATION ANALYSIS"
[1] 3
  FBN3 MUTATED FBN3 WILD-TYPE 
            18            781 
  FBN3 MUTATED FBN3 WILD-TYPE 
            18            781 
[1] "FLNB MUTATION ANALYSIS"
[1] 3
  FLNB MUTATED FLNB WILD-TYPE 
            10            789 
  FLNB MUTATED FLNB WILD-TYPE 
            10            789 
[1] "SLFN11 MUTATION ANALYSIS"
[1] 3
  SLFN11 MUTATED SLFN11 WILD-TYPE 
               7              792 
  SLFN11 MUTATED SLFN11 WILD-TYPE 
               7              792 
[1] "SEZ6L2 MUTATION ANALYSIS"
[1] 3
  SEZ6L2 MUTATED SEZ6L2 WILD-TYPE 
               7              792 
  SEZ6L2 MUTATED SEZ6L2 WILD-TYPE 
               7              792 
[1] "MAX MUTATION ANALYSIS"
[1] 3
  MAX MUTATED MAX WILD-TYPE 
            6           793 
  MAX MUTATED MAX WILD-TYPE 
            6           793 
[1] "ZNF148 MUTATION ANALYSIS"
[1] 3
  ZNF148 MUTATED ZNF148 WILD-TYPE 
               5              794 
  ZNF148 MUTATED ZNF148 WILD-TYPE 
               5              794 
[1] "PAN3 MUTATION ANALYSIS"
[1] 3
  PAN3 MUTATED PAN3 WILD-TYPE 
             7            792 
  PAN3 MUTATED PAN3 WILD-TYPE 
             7            792 
[1] "PPL MUTATION ANALYSIS"
[1] 3
  PPL MUTATED PPL WILD-TYPE 
            9           790 
  PPL MUTATED PPL WILD-TYPE 
            9           790 
[1] "IGFN1 MUTATION ANALYSIS"
[1] 3
  IGFN1 MUTATED IGFN1 WILD-TYPE 
              9             790 
  IGFN1 MUTATED IGFN1 WILD-TYPE 
              9             790 
[1] "GLYAT MUTATION ANALYSIS"
[1] 3
  GLYAT MUTATED GLYAT WILD-TYPE 
              5             794 
  GLYAT MUTATED GLYAT WILD-TYPE 
              5             794 
[1] "data2feature, selection=ALL"
 [1] "MRNA_CNMF"                   "MRNA_CHIERARCHICAL"         
 [3] "MIR_CNMF"                    "MIR_CHIERARCHICAL"          
 [5] "CN_CNMF"                     "METHLYATION_CNMF"           
 [7] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [9] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
[11] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[13] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 14 rows and 799 columns.

Variable 1:'MRNA_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'MRNA_CHIERARCHICAL':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'MIR_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'MIR_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'CN_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'METHLYATION_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'RPPA_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'RPPA_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'MRNASEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 10:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 11:'MIRSEQ_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 12:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 13:'MIRSEQ_MATURE_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 14:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=6,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "## **** detect survival parameters (defined in index such as ind_OS, ind_MFS, ind_RFS, ind_RFS, ind_BCR and ind_d2ssd) *** ##"
[1] "detected survival parameters using [ind_OS, overall_survival]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_OS, curated_overall_survival]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_TCGAOS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survivial parameters using [ind_MFS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_RFS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_BCR]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_Progression]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [index_additional_survival_time]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using condition: [is.null(surv.mat)&&(selection=='SURV')]"
[1] "survival parameters accumulated so far"
NULL
[1] "************ conversion from categorical data to rank data ********** "
[1] "****** SUMMARY ***** "
Output Data has 799 columns, 0 survival variables, and 14 non-survival variables.
[1] "* survival variables: "
NULL
[1] "* non-survival variables: "
 [1] "MRNA_CNMF"                   "MRNA_CHIERARCHICAL"         
 [3] "MIR_CNMF"                    "MIR_CHIERARCHICAL"          
 [5] "CN_CNMF"                     "METHLYATION_CNMF"           
 [7] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [9] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
[11] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
[13] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
MRNA_CNMF, nv=4, binary=FALSE, numeric=FALSE
MRNA_CHIERARCHICAL, nv=4, binary=FALSE, numeric=FALSE
MIR_CNMF, nv=4, binary=FALSE, numeric=FALSE
MIR_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
CN_CNMF, nv=3, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=4, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=4, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=4, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=6, binary=FALSE, numeric=FALSE

Clustering(1) Variable = IDH1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH1 MUTATED        1      3      0      9
  IDH1 WILD-TYPE     77     38     64     48
D1V1, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1            1             77
  CLUS_2            3             38
  CLUS_3            0             64
  CLUS_4            9             48
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH1 MUTATED        0     13      0      0
  IDH1 WILD-TYPE     63     37     48     79
D1V2, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1            0             63
  CLUS_2           13             37
  CLUS_3            0             48
  CLUS_4            0             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH1 MUTATED        0     13      1      0
  IDH1 WILD-TYPE     70     85     43     63
D1V3, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1            0             70
  CLUS_2           13             85
  CLUS_3            1             43
  CLUS_4            0             63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH1 MUTATED       13      0      1
  IDH1 WILD-TYPE    125     61     75
D1V4, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1           13            125
  CLUS_2            0             61
  CLUS_3            1             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH1 MUTATED        8    381     23
  IDH1 WILD-TYPE    284     51     39
D1V5, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1            8            284
  CLUS_2          381             51
  CLUS_3           23             39
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH1 MUTATED        0    219     39    148
  IDH1 WILD-TYPE    153      4     49     13
D1V6, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1            0            153
  CLUS_2          219              4
  CLUS_3           39             49
  CLUS_4          148             13
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH1 MUTATED      111    102     66     65
  IDH1 WILD-TYPE     74     53     72     30
D1V7, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1          111             74
  CLUS_2          102             53
  CLUS_3           66             72
  CLUS_4           65             30
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH1 MUTATED      115    130     99
  IDH1 WILD-TYPE     90     90     49
D1V8, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1          115             90
  CLUS_2          130             90
  CLUS_3           99             49
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH1 MUTATED       37    151    221
  IDH1 WILD-TYPE    201     40      7
D1V9, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1           37            201
  CLUS_2          151             40
  CLUS_3          221              7
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH1 MUTATED        1    182    226
  IDH1 WILD-TYPE    195      9     44
D1V10, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1            1            195
  CLUS_2          182              9
  CLUS_3          226             44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH1 MUTATED      102     73     77    145
  IDH1 WILD-TYPE     38     34      6     37
D1V11, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1          102             38
  CLUS_2           73             34
  CLUS_3           77              6
  CLUS_4          145             37
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH1 MUTATED      208    154     35
  IDH1 WILD-TYPE     15     32     68
D1V12, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1          208             15
  CLUS_2          154             32
  CLUS_3           35             68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH1 MUTATED       96     76    101    121
  IDH1 WILD-TYPE     31     43      5     35
D1V13, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1           96             31
  CLUS_2           76             43
  CLUS_3          101              5
  CLUS_4          121             35
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  IDH1 MUTATED       93     69     90     54      0     88
  IDH1 WILD-TYPE      6      8     30      3     63      4
D1V14, multiclass
        clus
vv       IDH1 MUTATED IDH1 WILD-TYPE
  CLUS_1           93              6
  CLUS_2           69              8
  CLUS_3           90             30
  CLUS_4           54              3
  CLUS_5            0             63
  CLUS_6           88              4
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(2) Variable = TP53 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP53 MUTATED       17     18     10     24
  TP53 WILD-TYPE     61     23     54     33
D2V1, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           17             61
  CLUS_2           18             23
  CLUS_3           10             54
  CLUS_4           24             33
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP53 MUTATED       16     30      7     16
  TP53 WILD-TYPE     47     20     41     63
D2V2, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           16             47
  CLUS_2           30             20
  CLUS_3            7             41
  CLUS_4           16             63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP53 MUTATED       10     41     10     19
  TP53 WILD-TYPE     60     57     34     44
D2V3, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           10             60
  CLUS_2           41             57
  CLUS_3           10             34
  CLUS_4           19             44
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP53 MUTATED       47     15     18
  TP53 WILD-TYPE     91     46     58
D2V4, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           47             91
  CLUS_2           15             46
  CLUS_3           18             58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP53 MUTATED       67    228     35
  TP53 WILD-TYPE    225    204     27
D2V5, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           67            225
  CLUS_2          228            204
  CLUS_3           35             27
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP53 MUTATED       33    212     24      9
  TP53 WILD-TYPE    120     11     64    152
D2V6, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           33            120
  CLUS_2          212             11
  CLUS_3           24             64
  CLUS_4            9            152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP53 MUTATED       86     58     54     48
  TP53 WILD-TYPE     99     97     84     47
D2V7, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           86             99
  CLUS_2           58             97
  CLUS_3           54             84
  CLUS_4           48             47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP53 MUTATED      101     96     49
  TP53 WILD-TYPE    104    124     99
D2V8, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1          101            104
  CLUS_2           96            124
  CLUS_3           49             99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP53 MUTATED       81     69    146
  TP53 WILD-TYPE    157    122     82
D2V9, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           81            157
  CLUS_2           69            122
  CLUS_3          146             82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP53 MUTATED       44    177     75
  TP53 WILD-TYPE    152     14    195
D2V10, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           44            152
  CLUS_2          177             14
  CLUS_3           75            195
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP53 MUTATED       84     71     17     75
  TP53 WILD-TYPE     56     36     66    107
D2V11, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           84             56
  CLUS_2           71             36
  CLUS_3           17             66
  CLUS_4           75            107
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP53 MUTATED      134     73     40
  TP53 WILD-TYPE     89    113     63
D2V12, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1          134             89
  CLUS_2           73            113
  CLUS_3           40             63
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP53 MUTATED       88     66     24     66
  TP53 WILD-TYPE     39     53     82     90
D2V13, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           88             39
  CLUS_2           66             53
  CLUS_3           24             82
  CLUS_4           66             90
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  TP53 MUTATED       88     47     42      4      8     55
  TP53 WILD-TYPE     11     30     78     53     55     37
D2V14, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           88             11
  CLUS_2           47             30
  CLUS_3           42             78
  CLUS_4            4             53
  CLUS_5            8             55
  CLUS_6           55             37
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(3) Variable = ATRX MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATRX MUTATED        2      4      0      7
  ATRX WILD-TYPE     76     37     64     50
D3V1, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1            2             76
  CLUS_2            4             37
  CLUS_3            0             64
  CLUS_4            7             50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATRX MUTATED        0     11      0      2
  ATRX WILD-TYPE     63     39     48     77
D3V2, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1            0             63
  CLUS_2           11             39
  CLUS_3            0             48
  CLUS_4            2             77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATRX MUTATED        3     11      2      0
  ATRX WILD-TYPE     67     87     42     63
D3V3, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1            3             67
  CLUS_2           11             87
  CLUS_3            2             42
  CLUS_4            0             63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ATRX MUTATED       13      0      3
  ATRX WILD-TYPE    125     61     73
D3V4, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1           13            125
  CLUS_2            0             61
  CLUS_3            3             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ATRX MUTATED       11    184     18
  ATRX WILD-TYPE    281    248     44
D3V5, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1           11            281
  CLUS_2          184            248
  CLUS_3           18             44
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATRX MUTATED        6    171     23      5
  ATRX WILD-TYPE    147     52     65    156
D3V6, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1            6            147
  CLUS_2          171             52
  CLUS_3           23             65
  CLUS_4            5            156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATRX MUTATED       56     48     31     42
  ATRX WILD-TYPE    129    107    107     53
D3V7, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1           56            129
  CLUS_2           48            107
  CLUS_3           31            107
  CLUS_4           42             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ATRX MUTATED       62     72     43
  ATRX WILD-TYPE    143    148    105
D3V8, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1           62            143
  CLUS_2           72            148
  CLUS_3           43            105
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ATRX MUTATED       34     57    115
  ATRX WILD-TYPE    204    134    113
D3V9, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1           34            204
  CLUS_2           57            134
  CLUS_3          115            113
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ATRX MUTATED        5    141     60
  ATRX WILD-TYPE    191     50    210
D3V10, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1            5            191
  CLUS_2          141             50
  CLUS_3           60            210
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATRX MUTATED       63     61     10     60
  ATRX WILD-TYPE     77     46     73    122
D3V11, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1           63             77
  CLUS_2           61             46
  CLUS_3           10             73
  CLUS_4           60            122
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ATRX MUTATED      109     60     25
  ATRX WILD-TYPE    114    126     78
D3V12, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1          109            114
  CLUS_2           60            126
  CLUS_3           25             78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATRX MUTATED       70     53     16     52
  ATRX WILD-TYPE     57     66     90    104
D3V13, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1           70             57
  CLUS_2           53             66
  CLUS_3           16             90
  CLUS_4           52            104
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  ATRX MUTATED       69     41     34      2      3     42
  ATRX WILD-TYPE     30     36     86     55     60     50
D3V14, multiclass
        clus
vv       ATRX MUTATED ATRX WILD-TYPE
  CLUS_1           69             30
  CLUS_2           41             36
  CLUS_3           34             86
  CLUS_4            2             55
  CLUS_5            3             60
  CLUS_6           42             50
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(4) Variable = CIC MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIC MUTATED        0      1      0      0
  CIC WILD-TYPE     78     40     64     57
D4V1, multiclass
[1] "Remove cluster labels:" "CIC MUTATED"           
clus
  CIC MUTATED CIC WILD-TYPE 
            1           239 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-2470    TCGA-02-2483 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124    TCGA-06-0126 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0132    TCGA-06-0137 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157    TCGA-06-0158 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0166    TCGA-06-0167    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-2557    TCGA-06-2558 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5859    TCGA-06-6389    TCGA-06-6390    TCGA-06-6391    TCGA-08-0386 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-0616    TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-0821    TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-3653    TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0781 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-0817    TCGA-14-0871    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-1829    TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-15-1444    TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-1390    TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-2624    TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-5947    TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5954 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-26-5136    TCGA-26-5139    TCGA-27-1830    TCGA-27-1831    TCGA-27-1832 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-1833    TCGA-27-1834    TCGA-27-1835    TCGA-27-1836    TCGA-27-1837 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-1838    TCGA-27-2518    TCGA-27-2519    TCGA-27-2523    TCGA-27-2524 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-2526    TCGA-27-2527    TCGA-27-2528    TCGA-28-1747    TCGA-28-1753 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-2501    TCGA-28-2502    TCGA-28-2509    TCGA-28-2510    TCGA-28-2513 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-2514    TCGA-28-5204    TCGA-28-5207    TCGA-28-5208    TCGA-28-5209 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-5213    TCGA-28-5214    TCGA-28-5215    TCGA-28-5216    TCGA-28-5218 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-5219    TCGA-28-5220    TCGA-28-6450    TCGA-32-1970    TCGA-32-1977 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-1979    TCGA-32-1980    TCGA-32-1982    TCGA-32-1986    TCGA-32-1991 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-2491    TCGA-32-2494    TCGA-32-2495    TCGA-32-2615    TCGA-32-2632 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-2634    TCGA-32-2638    TCGA-32-4208    TCGA-32-4209    TCGA-32-4210 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-4211    TCGA-32-4213    TCGA-32-4719    TCGA-32-5222    TCGA-41-2571 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-41-2572    TCGA-41-2573    TCGA-41-2575    TCGA-41-3392    TCGA-41-3393 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-41-3915    TCGA-41-4097    TCGA-41-5651    TCGA-76-4925    TCGA-76-4926 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-4927    TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-4934    TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6285    TCGA-81-5910    TCGA-87-5896 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIC MUTATED        0      1      0      0
  CIC WILD-TYPE     63     49     48     79
D4V2, multiclass
[1] "Remove cluster labels:" "CIC MUTATED"           
clus
  CIC MUTATED CIC WILD-TYPE 
            1           239 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-2470    TCGA-02-2483 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124    TCGA-06-0126 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0132    TCGA-06-0137 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157    TCGA-06-0158 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0166    TCGA-06-0167    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-2557    TCGA-06-2558 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5859    TCGA-06-6389    TCGA-06-6390    TCGA-06-6391    TCGA-08-0386 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-0616    TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-0821    TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-3653    TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0781 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-0817    TCGA-14-0871    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-1829    TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-15-1444    TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-1390    TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-2624    TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-5947    TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5954 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-26-5136    TCGA-26-5139    TCGA-27-1830    TCGA-27-1831    TCGA-27-1832 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-1833    TCGA-27-1834    TCGA-27-1835    TCGA-27-1836    TCGA-27-1837 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-1838    TCGA-27-2518    TCGA-27-2519    TCGA-27-2523    TCGA-27-2524 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-2526    TCGA-27-2527    TCGA-27-2528    TCGA-28-1747    TCGA-28-1753 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-2501    TCGA-28-2502    TCGA-28-2509    TCGA-28-2510    TCGA-28-2513 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-2514    TCGA-28-5204    TCGA-28-5207    TCGA-28-5208    TCGA-28-5209 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-5213    TCGA-28-5214    TCGA-28-5215    TCGA-28-5216    TCGA-28-5218 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-5219    TCGA-28-5220    TCGA-28-6450    TCGA-32-1970    TCGA-32-1977 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-1979    TCGA-32-1980    TCGA-32-1982    TCGA-32-1986    TCGA-32-1991 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-2491    TCGA-32-2494    TCGA-32-2495    TCGA-32-2615    TCGA-32-2632 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-2634    TCGA-32-2638    TCGA-32-4208    TCGA-32-4209    TCGA-32-4210 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-4211    TCGA-32-4213    TCGA-32-4719    TCGA-32-5222    TCGA-41-2571 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-41-2572    TCGA-41-2573    TCGA-41-2575    TCGA-41-3392    TCGA-41-3393 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-41-3915    TCGA-41-4097    TCGA-41-5651    TCGA-76-4925    TCGA-76-4926 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-4927    TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-4934    TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6285    TCGA-81-5910    TCGA-87-5896 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIC MUTATED        0      1      0      0
  CIC WILD-TYPE     70     97     44     63
D4V3, multiclass
[1] "Remove cluster labels:" "CIC MUTATED"           
clus
  CIC MUTATED CIC WILD-TYPE 
            1           274 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-0055    TCGA-02-2470 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-02-2483    TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0126    TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0137 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0151    TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0158    TCGA-06-0166    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-1806    TCGA-06-2557 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-2558    TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-2564    TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5408    TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5414    TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5858    TCGA-06-5859    TCGA-06-6388    TCGA-06-6389    TCGA-06-6390 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-6391    TCGA-06-6693    TCGA-06-6694    TCGA-06-6695    TCGA-06-6697 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-6698    TCGA-06-6699    TCGA-06-6700    TCGA-06-6701    TCGA-08-0386 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-0616    TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-0821    TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-3653    TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0740 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-0781    TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-0813    TCGA-14-0817    TCGA-14-0862    TCGA-14-0871    TCGA-14-1043 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-1395    TCGA-14-1450    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-1829    TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-15-1444    TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-1390    TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-2624    TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-5947    TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5953 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-5954    TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-26-1439    TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-26-5135    TCGA-26-5136    TCGA-26-5139    TCGA-26-6173    TCGA-26-6174 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-1830    TCGA-27-1831    TCGA-27-1832    TCGA-27-1833    TCGA-27-1834 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-1835    TCGA-27-1836    TCGA-27-1837    TCGA-27-1838    TCGA-27-2518 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-2519    TCGA-27-2523    TCGA-27-2524    TCGA-27-2526    TCGA-27-2527 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-2528    TCGA-28-1747    TCGA-28-1753    TCGA-28-2502    TCGA-28-2509 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-2510    TCGA-28-2513    TCGA-28-2514    TCGA-28-5204    TCGA-28-5207 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-5208    TCGA-28-5209    TCGA-28-5211    TCGA-28-5213    TCGA-28-5214 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-5215    TCGA-28-5216    TCGA-28-5218    TCGA-28-5219    TCGA-28-5220 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-6450    TCGA-32-1970    TCGA-32-1977    TCGA-32-1979    TCGA-32-1980 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-1982    TCGA-32-1986    TCGA-32-1991    TCGA-32-2491    TCGA-32-2494 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-2495    TCGA-32-2615    TCGA-32-2632    TCGA-32-2634    TCGA-32-2638 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-4208    TCGA-32-4209    TCGA-32-4210    TCGA-32-4211    TCGA-32-4213 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-4719    TCGA-32-5222    TCGA-41-2571    TCGA-41-2572    TCGA-41-2573 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-41-2575    TCGA-41-3392    TCGA-41-3393    TCGA-41-3915    TCGA-41-4097 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-41-5651    TCGA-41-6646    TCGA-74-6573    TCGA-74-6575    TCGA-74-6577 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-74-6578    TCGA-74-6584    TCGA-76-4925    TCGA-76-4926    TCGA-76-4927 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932    TCGA-76-4934 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193    TCGA-76-6280 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6283    TCGA-76-6285    TCGA-76-6286    TCGA-76-6656 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-6657    TCGA-76-6660    TCGA-76-6661    TCGA-76-6662    TCGA-76-6663 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-6664    TCGA-81-5910    TCGA-81-5911    TCGA-87-5896 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CIC MUTATED        1      0      0
  CIC WILD-TYPE    137     61     76
D4V4, multiclass
[1] "Remove cluster labels:" "CIC MUTATED"           
clus
  CIC MUTATED CIC WILD-TYPE 
            1           274 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-0055    TCGA-02-2470 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-02-2483    TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0126    TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0137 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0151    TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0158    TCGA-06-0166    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-1806    TCGA-06-2557 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-2558    TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-2564    TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5408    TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5414    TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-5858    TCGA-06-5859    TCGA-06-6388    TCGA-06-6389    TCGA-06-6390 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-6391    TCGA-06-6693    TCGA-06-6694    TCGA-06-6695    TCGA-06-6697 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-06-6698    TCGA-06-6699    TCGA-06-6700    TCGA-06-6701    TCGA-08-0386 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-0616    TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-0821    TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-12-3653    TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0740 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-0781    TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-0813    TCGA-14-0817    TCGA-14-0862    TCGA-14-0871    TCGA-14-1043 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-1395    TCGA-14-1450    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-14-1829    TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-15-1444    TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-1390    TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-2624    TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-5947    TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5953 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-19-5954    TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-26-1439    TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-26-5135    TCGA-26-5136    TCGA-26-5139    TCGA-26-6173    TCGA-26-6174 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-1830    TCGA-27-1831    TCGA-27-1832    TCGA-27-1833    TCGA-27-1834 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-1835    TCGA-27-1836    TCGA-27-1837    TCGA-27-1838    TCGA-27-2518 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-2519    TCGA-27-2523    TCGA-27-2524    TCGA-27-2526    TCGA-27-2527 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-27-2528    TCGA-28-1747    TCGA-28-1753    TCGA-28-2502    TCGA-28-2509 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-2510    TCGA-28-2513    TCGA-28-2514    TCGA-28-5204    TCGA-28-5207 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-5208    TCGA-28-5209    TCGA-28-5211    TCGA-28-5213    TCGA-28-5214 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-5215    TCGA-28-5216    TCGA-28-5218    TCGA-28-5219    TCGA-28-5220 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-28-6450    TCGA-32-1970    TCGA-32-1977    TCGA-32-1979    TCGA-32-1980 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-1982    TCGA-32-1986    TCGA-32-1991    TCGA-32-2491    TCGA-32-2494 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-2495    TCGA-32-2615    TCGA-32-2632    TCGA-32-2634    TCGA-32-2638 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-4208    TCGA-32-4209    TCGA-32-4210    TCGA-32-4211    TCGA-32-4213 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-32-4719    TCGA-32-5222    TCGA-41-2571    TCGA-41-2572    TCGA-41-2573 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-41-2575    TCGA-41-3392    TCGA-41-3393    TCGA-41-3915    TCGA-41-4097 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-41-5651    TCGA-41-6646    TCGA-74-6573    TCGA-74-6575    TCGA-74-6577 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-74-6578    TCGA-74-6584    TCGA-76-4925    TCGA-76-4926    TCGA-76-4927 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932    TCGA-76-4934 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193    TCGA-76-6280 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6283    TCGA-76-6285    TCGA-76-6286    TCGA-76-6656 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-6657    TCGA-76-6660    TCGA-76-6661    TCGA-76-6662    TCGA-76-6663 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
   TCGA-76-6664    TCGA-81-5910    TCGA-81-5911    TCGA-87-5896 
"CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" "CIC WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CIC MUTATED        1    108      0
  CIC WILD-TYPE    291    324     62
D4V5, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1           1           291
  CLUS_2         108           324
  CLUS_3           0            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIC MUTATED        1      0      5    102
  CIC WILD-TYPE    152    223     83     59
D4V6, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1           1           152
  CLUS_2           0           223
  CLUS_3           5            83
  CLUS_4         102            59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIC MUTATED       36     29     25      5
  CIC WILD-TYPE    149    126    113     90
D4V7, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1          36           149
  CLUS_2          29           126
  CLUS_3          25           113
  CLUS_4           5            90
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CIC MUTATED       30     34     31
  CIC WILD-TYPE    175    186    117
D4V8, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1          30           175
  CLUS_2          34           186
  CLUS_3          31           117
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CIC MUTATED        2     52     55
  CIC WILD-TYPE    236    139    173
D4V9, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1           2           236
  CLUS_2          52           139
  CLUS_3          55           173
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CIC MUTATED        0      5    104
  CIC WILD-TYPE    196    186    166
D4V10, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1           0           196
  CLUS_2           5           186
  CLUS_3         104           166
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIC MUTATED       17      3     46     42
  CIC WILD-TYPE    123    104     37    140
D4V11, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1          17           123
  CLUS_2           3           104
  CLUS_3          46            37
  CLUS_4          42           140
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CIC MUTATED       55     51      2
  CIC WILD-TYPE    168    135    101
D4V12, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1          55           168
  CLUS_2          51           135
  CLUS_3           2           101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIC MUTATED        7      8     60     33
  CIC WILD-TYPE    120    111     46    123
D4V13, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1           7           120
  CLUS_2           8           111
  CLUS_3          60            46
  CLUS_4          33           123
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  CIC MUTATED        2     16     25     43      0     22
  CIC WILD-TYPE     97     61     95     14     63     70
D4V14, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1           2            97
  CLUS_2          16            61
  CLUS_3          25            95
  CLUS_4          43            14
  CLUS_5           0            63
  CLUS_6          22            70
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(5) Variable = NF1 MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NF1 MUTATED       12      3      4      2
  NF1 WILD-TYPE     66     38     60     55
D5V1, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          12            66
  CLUS_2           3            38
  CLUS_3           4            60
  CLUS_4           2            55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NF1 MUTATED       14      1      1      5
  NF1 WILD-TYPE     49     49     47     74
D5V2, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          14            49
  CLUS_2           1            49
  CLUS_3           1            47
  CLUS_4           5            74
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NF1 MUTATED       12      4      4      8
  NF1 WILD-TYPE     58     94     40     55
D5V3, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          12            58
  CLUS_2           4            94
  CLUS_3           4            40
  CLUS_4           8            55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NF1 MUTATED       14      7      7
  NF1 WILD-TYPE    124     54     69
D5V4, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          14           124
  CLUS_2           7            54
  CLUS_3           7            69
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NF1 MUTATED       30     20     12
  NF1 WILD-TYPE    262    412     50
D5V5, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          30           262
  CLUS_2          20           412
  CLUS_3          12            50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NF1 MUTATED       21      2     16      7
  NF1 WILD-TYPE    132    221     72    154
D5V6, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          21           132
  CLUS_2           2           221
  CLUS_3          16            72
  CLUS_4           7           154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NF1 MUTATED       12     11     13      5
  NF1 WILD-TYPE    173    144    125     90
D5V7, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          12           173
  CLUS_2          11           144
  CLUS_3          13           125
  CLUS_4           5            90
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NF1 MUTATED       27      4     10
  NF1 WILD-TYPE    178    216    138
D5V8, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          27           178
  CLUS_2           4           216
  CLUS_3          10           138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NF1 MUTATED       28     10      6
  NF1 WILD-TYPE    210    181    222
D5V9, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          28           210
  CLUS_2          10           181
  CLUS_3           6           222
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NF1 MUTATED       24      7     13
  NF1 WILD-TYPE    172    184    257
D5V10, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          24           172
  CLUS_2           7           184
  CLUS_3          13           257
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NF1 MUTATED        8     11      5      9
  NF1 WILD-TYPE    132     96     78    173
D5V11, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1           8           132
  CLUS_2          11            96
  CLUS_3           5            78
  CLUS_4           9           173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NF1 MUTATED       10      6     17
  NF1 WILD-TYPE    213    180     86
D5V12, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          10           213
  CLUS_2           6           180
  CLUS_3          17            86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NF1 MUTATED       11     10      5      7
  NF1 WILD-TYPE    116    109    101    149
D5V13, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          11           116
  CLUS_2          10           109
  CLUS_3           5           101
  CLUS_4           7           149
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  NF1 MUTATED        1      4      5      2     16      5
  NF1 WILD-TYPE     98     73    115     55     47     87
D5V14, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1           1            98
  CLUS_2           4            73
  CLUS_3           5           115
  CLUS_4           2            55
  CLUS_5          16            47
  CLUS_6           5            87
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(6) Variable = PIK3R1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3R1 MUTATED        8      1      7      6
  PIK3R1 WILD-TYPE     70     40     57     51
D6V1, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1              8               70
  CLUS_2              1               40
  CLUS_3              7               57
  CLUS_4              6               51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3R1 MUTATED        7      6      6      3
  PIK3R1 WILD-TYPE     56     44     42     76
D6V2, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1              7               56
  CLUS_2              6               44
  CLUS_3              6               42
  CLUS_4              3               76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3R1 MUTATED       13     13      3      3
  PIK3R1 WILD-TYPE     57     85     41     60
D6V3, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1             13               57
  CLUS_2             13               85
  CLUS_3              3               41
  CLUS_4              3               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3R1 MUTATED       16      5     11
  PIK3R1 WILD-TYPE    122     56     65
D6V4, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1             16              122
  CLUS_2              5               56
  CLUS_3             11               65
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3R1 MUTATED       27     22      4
  PIK3R1 WILD-TYPE    265    410     58
D6V5, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1             27              265
  CLUS_2             22              410
  CLUS_3              4               58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3R1 MUTATED       20      5      2     13
  PIK3R1 WILD-TYPE    133    218     86    148
D6V6, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1             20              133
  CLUS_2              5              218
  CLUS_3              2               86
  CLUS_4             13              148
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3R1 MUTATED       15     11      8      8
  PIK3R1 WILD-TYPE    170    144    130     87
D6V7, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1             15              170
  CLUS_2             11              144
  CLUS_3              8              130
  CLUS_4              8               87
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3R1 MUTATED       16     15     11
  PIK3R1 WILD-TYPE    189    205    137
D6V8, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1             16              189
  CLUS_2             15              205
  CLUS_3             11              137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3R1 MUTATED       17      6     11
  PIK3R1 WILD-TYPE    221    185    217
D6V9, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1             17              221
  CLUS_2              6              185
  CLUS_3             11              217
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3R1 MUTATED       11     10     13
  PIK3R1 WILD-TYPE    185    181    257
D6V10, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1             11              185
  CLUS_2             10              181
  CLUS_3             13              257
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3R1 MUTATED        6      3      8      5
  PIK3R1 WILD-TYPE    134    104     75    177
D6V11, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1              6              134
  CLUS_2              3              104
  CLUS_3              8               75
  CLUS_4              5              177
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3R1 MUTATED       12      7      3
  PIK3R1 WILD-TYPE    211    179    100
D6V12, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1             12              211
  CLUS_2              7              179
  CLUS_3              3              100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3R1 MUTATED        5      5      6      6
  PIK3R1 WILD-TYPE    122    114    100    150
D6V13, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1              5              122
  CLUS_2              5              114
  CLUS_3              6              100
  CLUS_4              6              150
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  PIK3R1 MUTATED        3      3      5      5      2      4
  PIK3R1 WILD-TYPE     96     74    115     52     61     88
D6V14, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1              3               96
  CLUS_2              3               74
  CLUS_3              5              115
  CLUS_4              5               52
  CLUS_5              2               61
  CLUS_6              4               88
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(7) Variable = NOTCH1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOTCH1 MUTATED        0      0      0      0
  NOTCH1 WILD-TYPE     78     41     64     57
D7V1, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOTCH1 MUTATED        0      0      0      0
  NOTCH1 WILD-TYPE     63     50     48     79
D7V2, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOTCH1 MUTATED        0      0      0      0
  NOTCH1 WILD-TYPE     70     98     44     63
D7V3, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NOTCH1 MUTATED        0      0      0
  NOTCH1 WILD-TYPE    138     61     76
D7V4, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NOTCH1 MUTATED        1     41      0
  NOTCH1 WILD-TYPE    291    391     62
D7V5, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1              1              291
  CLUS_2             41              391
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOTCH1 MUTATED        1      9      0     32
  NOTCH1 WILD-TYPE    152    214     88    129
D7V6, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1              1              152
  CLUS_2              9              214
  CLUS_3              0               88
  CLUS_4             32              129
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOTCH1 MUTATED       13      9     12      5
  NOTCH1 WILD-TYPE    172    146    126     90
D7V7, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1             13              172
  CLUS_2              9              146
  CLUS_3             12              126
  CLUS_4              5               90
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NOTCH1 MUTATED       14     15     10
  NOTCH1 WILD-TYPE    191    205    138
D7V8, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1             14              191
  CLUS_2             15              205
  CLUS_3             10              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NOTCH1 MUTATED        3     24     15
  NOTCH1 WILD-TYPE    235    167    213
D7V9, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1              3              235
  CLUS_2             24              167
  CLUS_3             15              213
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NOTCH1 MUTATED        0      6     36
  NOTCH1 WILD-TYPE    196    185    234
D7V10, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1              0              196
  CLUS_2              6              185
  CLUS_3             36              234
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOTCH1 MUTATED        4      3     14     20
  NOTCH1 WILD-TYPE    136    104     69    162
D7V11, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1              4              136
  CLUS_2              3              104
  CLUS_3             14               69
  CLUS_4             20              162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NOTCH1 MUTATED       16     23      2
  NOTCH1 WILD-TYPE    207    163    101
D7V12, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1             16              207
  CLUS_2             23              163
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOTCH1 MUTATED        2      3     16     20
  NOTCH1 WILD-TYPE    125    116     90    136
D7V13, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1              2              125
  CLUS_2              3              116
  CLUS_3             16               90
  CLUS_4             20              136
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  NOTCH1 MUTATED        3      7     15      7      0      9
  NOTCH1 WILD-TYPE     96     70    105     50     63     83
D7V14, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1              3               96
  CLUS_2              7               70
  CLUS_3             15              105
  CLUS_4              7               50
  CLUS_5              0               63
  CLUS_6              9               83
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(8) Variable = IDH2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH2 MUTATED        0      0      0      0
  IDH2 WILD-TYPE     78     41     64     57
D8V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH2 MUTATED        0      0      0      0
  IDH2 WILD-TYPE     63     50     48     79
D8V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH2 MUTATED        0      0      0      0
  IDH2 WILD-TYPE     70     98     44     63
D8V3, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH2 MUTATED        0      0      0
  IDH2 WILD-TYPE    138     61     76
D8V4, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH2 MUTATED        1     19      0
  IDH2 WILD-TYPE    291    413     62
D8V5, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            1            291
  CLUS_2           19            413
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH2 MUTATED        0      3      4     13
  IDH2 WILD-TYPE    153    220     84    148
D8V6, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            0            153
  CLUS_2            3            220
  CLUS_3            4             84
  CLUS_4           13            148
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH2 MUTATED        6      7      4      0
  IDH2 WILD-TYPE    179    148    134     95
D8V7, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            6            179
  CLUS_2            7            148
  CLUS_3            4            134
  CLUS_4            0             95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH2 MUTATED        7      3      7
  IDH2 WILD-TYPE    198    217    141
D8V8, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            7            198
  CLUS_2            3            217
  CLUS_3            7            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH2 MUTATED        0     14      6
  IDH2 WILD-TYPE    238    177    222
D8V9, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            0            238
  CLUS_2           14            177
  CLUS_3            6            222
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH2 MUTATED        0      1     19
  IDH2 WILD-TYPE    196    190    251
D8V10, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            0            196
  CLUS_2            1            190
  CLUS_3           19            251
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH2 MUTATED        3      0      5     12
  IDH2 WILD-TYPE    137    107     78    170
D8V11, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            3            137
  CLUS_2            0            107
  CLUS_3            5             78
  CLUS_4           12            170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH2 MUTATED        5     15      0
  IDH2 WILD-TYPE    218    171    103
D8V12, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            5            218
  CLUS_2           15            171
  CLUS_3            0            103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH2 MUTATED        1      3      5     11
  IDH2 WILD-TYPE    126    116    101    145
D8V13, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            1            126
  CLUS_2            3            116
  CLUS_3            5            101
  CLUS_4           11            145
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  IDH2 MUTATED        2      3     10      3      0      2
  IDH2 WILD-TYPE     97     74    110     54     63     90
D8V14, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            2             97
  CLUS_2            3             74
  CLUS_3           10            110
  CLUS_4            3             54
  CLUS_5            0             63
  CLUS_6            2             90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(9) Variable = TCF12 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TCF12 MUTATED        1      0      1      1
  TCF12 WILD-TYPE     77     41     63     56
D9V1, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             1              77
  CLUS_2             0              41
  CLUS_3             1              63
  CLUS_4             1              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TCF12 MUTATED        1      1      1      0
  TCF12 WILD-TYPE     62     49     47     79
D9V2, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             1              62
  CLUS_2             1              49
  CLUS_3             1              47
  CLUS_4             0              79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TCF12 MUTATED        2      2      0      0
  TCF12 WILD-TYPE     68     96     44     63
D9V3, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             2              68
  CLUS_2             2              96
  CLUS_3             0              44
  CLUS_4             0              63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TCF12 MUTATED        2      2      0
  TCF12 WILD-TYPE    136     59     76
D9V4, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             2             136
  CLUS_2             2              59
  CLUS_3             0              76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TCF12 MUTATED        3     14      1
  TCF12 WILD-TYPE    289    418     61
D9V5, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             3             289
  CLUS_2            14             418
  CLUS_3             1              61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TCF12 MUTATED        3      4      3      7
  TCF12 WILD-TYPE    150    219     85    154
D9V6, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             3             150
  CLUS_2             4             219
  CLUS_3             3              85
  CLUS_4             7             154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TCF12 MUTATED        6      2      5      3
  TCF12 WILD-TYPE    179    153    133     92
D9V7, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             6             179
  CLUS_2             2             153
  CLUS_3             5             133
  CLUS_4             3              92
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TCF12 MUTATED        8      6      2
  TCF12 WILD-TYPE    197    214    146
D9V8, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             8             197
  CLUS_2             6             214
  CLUS_3             2             146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TCF12 MUTATED        2      5      9
  TCF12 WILD-TYPE    236    186    219
D9V9, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             2             236
  CLUS_2             5             186
  CLUS_3             9             219
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TCF12 MUTATED        2      6      8
  TCF12 WILD-TYPE    194    185    262
D9V10, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             2             194
  CLUS_2             6             185
  CLUS_3             8             262
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TCF12 MUTATED        5      2      3      5
  TCF12 WILD-TYPE    135    105     80    177
D9V11, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             5             135
  CLUS_2             2             105
  CLUS_3             3              80
  CLUS_4             5             177
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TCF12 MUTATED        8      6      1
  TCF12 WILD-TYPE    215    180    102
D9V12, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             8             215
  CLUS_2             6             180
  CLUS_3             1             102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TCF12 MUTATED        5      0      5      5
  TCF12 WILD-TYPE    122    119    101    151
D9V13, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             5             122
  CLUS_2             0             119
  CLUS_3             5             101
  CLUS_4             5             151
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  TCF12 MUTATED        4      0      5      3      1      2
  TCF12 WILD-TYPE     95     77    115     54     62     90
D9V14, multiclass
        clus
vv       TCF12 MUTATED TCF12 WILD-TYPE
  CLUS_1             4              95
  CLUS_2             0              77
  CLUS_3             5             115
  CLUS_4             3              54
  CLUS_5             1              62
  CLUS_6             2              90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(10) Variable = PIK3CA MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3CA MUTATED        7      5      7      5
  PIK3CA WILD-TYPE     71     36     57     52
D10V1, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1              7               71
  CLUS_2              5               36
  CLUS_3              7               57
  CLUS_4              5               52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3CA MUTATED        8      6      6      4
  PIK3CA WILD-TYPE     55     44     42     75
D10V2, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1              8               55
  CLUS_2              6               44
  CLUS_3              6               42
  CLUS_4              4               75
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3CA MUTATED        9     10      1      6
  PIK3CA WILD-TYPE     61     88     43     57
D10V3, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1              9               61
  CLUS_2             10               88
  CLUS_3              1               43
  CLUS_4              6               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3CA MUTATED       12      6      8
  PIK3CA WILD-TYPE    126     55     68
D10V4, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1             12              126
  CLUS_2              6               55
  CLUS_3              8               68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3CA MUTATED       26     38      5
  PIK3CA WILD-TYPE    266    394     57
D10V5, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1             26              266
  CLUS_2             38              394
  CLUS_3              5               57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3CA MUTATED       21      4      8     24
  PIK3CA WILD-TYPE    132    219     80    137
D10V6, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1             21              132
  CLUS_2              4              219
  CLUS_3              8               80
  CLUS_4             24              137
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3CA MUTATED       12     18     14      6
  PIK3CA WILD-TYPE    173    137    124     89
D10V7, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1             12              173
  CLUS_2             18              137
  CLUS_3             14              124
  CLUS_4              6               89
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3CA MUTATED       19     15     16
  PIK3CA WILD-TYPE    186    205    132
D10V8, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1             19              186
  CLUS_2             15              205
  CLUS_3             16              132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3CA MUTATED       23     15     16
  PIK3CA WILD-TYPE    215    176    212
D10V9, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1             23              215
  CLUS_2             15              176
  CLUS_3             16              212
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3CA MUTATED       18      8     28
  PIK3CA WILD-TYPE    178    183    242
D10V10, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1             18              178
  CLUS_2              8              183
  CLUS_3             28              242
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3CA MUTATED        6     14     11     13
  PIK3CA WILD-TYPE    134     93     72    169
D10V11, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1              6              134
  CLUS_2             14               93
  CLUS_3             11               72
  CLUS_4             13              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3CA MUTATED       13     16     15
  PIK3CA WILD-TYPE    210    170     88
D10V12, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1             13              210
  CLUS_2             16              170
  CLUS_3             15               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3CA MUTATED        6     10     13     15
  PIK3CA WILD-TYPE    121    109     93    141
D10V13, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1              6              121
  CLUS_2             10              109
  CLUS_3             13               93
  CLUS_4             15              141
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  PIK3CA MUTATED        0      4     13     13     10      4
  PIK3CA WILD-TYPE     99     73    107     44     53     88
D10V14, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1              0               99
  CLUS_2              4               73
  CLUS_3             13              107
  CLUS_4             13               44
  CLUS_5             10               53
  CLUS_6              4               88
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(11) Variable = RB1 MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RB1 MUTATED       11      1      3      3
  RB1 WILD-TYPE     67     40     61     54
D11V1, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1          11            67
  CLUS_2           1            40
  CLUS_3           3            61
  CLUS_4           3            54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RB1 MUTATED        5      2      0     11
  RB1 WILD-TYPE     58     48     48     68
D11V2, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1           5            58
  CLUS_2           2            48
  CLUS_3           0            48
  CLUS_4          11            68
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RB1 MUTATED       10      4      3      7
  RB1 WILD-TYPE     60     94     41     56
D11V3, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1          10            60
  CLUS_2           4            94
  CLUS_3           3            41
  CLUS_4           7            56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  RB1 MUTATED       12      6      6
  RB1 WILD-TYPE    126     55     70
D11V4, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1          12           126
  CLUS_2           6            55
  CLUS_3           6            70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  RB1 MUTATED       25      0      5
  RB1 WILD-TYPE    267    432     57
D11V5, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1          25           267
  CLUS_2           0           432
  CLUS_3           5            57
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RB1 MUTATED       10      0      3      1
  RB1 WILD-TYPE    143    223     85    160
D11V6, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1          10           143
  CLUS_2           0           223
  CLUS_3           3            85
  CLUS_4           1           160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RB1 MUTATED        6      2      6      1
  RB1 WILD-TYPE    179    153    132     94
D11V7, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1           6           179
  CLUS_2           2           153
  CLUS_3           6           132
  CLUS_4           1            94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  RB1 MUTATED        9      4      2
  RB1 WILD-TYPE    196    216    146
D11V8, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1           9           196
  CLUS_2           4           216
  CLUS_3           2           146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  RB1 MUTATED       14      1      1
  RB1 WILD-TYPE    224    190    227
D11V9, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1          14           224
  CLUS_2           1           190
  CLUS_3           1           227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  RB1 MUTATED       13      1      2
  RB1 WILD-TYPE    183    190    268
D11V10, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1          13           183
  CLUS_2           1           190
  CLUS_3           2           268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RB1 MUTATED        3      1      1      1
  RB1 WILD-TYPE    137    106     82    181
D11V11, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1           3           137
  CLUS_2           1           106
  CLUS_3           1            82
  CLUS_4           1           181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  RB1 MUTATED        1      1      4
  RB1 WILD-TYPE    222    185     99
D11V12, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1           1           222
  CLUS_2           1           185
  CLUS_3           4            99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RB1 MUTATED        2      2      0      2
  RB1 WILD-TYPE    125    117    106    154
D11V13, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1           2           125
  CLUS_2           2           117
  CLUS_3           0           106
  CLUS_4           2           154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  RB1 MUTATED        0      0      1      1      3      1
  RB1 WILD-TYPE     99     77    119     56     60     91
D11V14, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1           0            99
  CLUS_2           0            77
  CLUS_3           1           119
  CLUS_4           1            56
  CLUS_5           3            60
  CLUS_6           1            91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(12) Variable = FUBP1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FUBP1 MUTATED        0      0      0      0
  FUBP1 WILD-TYPE     78     41     64     57
D12V1, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FUBP1 MUTATED        0      0      0      0
  FUBP1 WILD-TYPE     63     50     48     79
D12V2, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FUBP1 MUTATED        0      0      0      0
  FUBP1 WILD-TYPE     70     98     44     63
D12V3, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FUBP1 MUTATED        0      0      0
  FUBP1 WILD-TYPE    138     61     76
D12V4, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FUBP1 MUTATED        1     46      0
  FUBP1 WILD-TYPE    291    386     62
D12V5, multiclass
        clus
vv       FUBP1 MUTATED FUBP1 WILD-TYPE
  CLUS_1             1             291
  CLUS_2            46             386
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FUBP1 MUTATED        1      0      2     44
  FUBP1 WILD-TYPE    152    223     86    117
D12V6, multiclass
        clus
vv       FUBP1 MUTATED FUBP1 WILD-TYPE
  CLUS_1             1             152
  CLUS_2             0             223
  CLUS_3             2              86
  CLUS_4            44             117
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FUBP1 MUTATED       14     13     12      2
  FUBP1 WILD-TYPE    171    142    126     93
D12V7, multiclass
        clus
vv       FUBP1 MUTATED FUBP1 WILD-TYPE
  CLUS_1            14             171
  CLUS_2            13             142
  CLUS_3            12             126
  CLUS_4             2              93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FUBP1 MUTATED       11     17     13
  FUBP1 WILD-TYPE    194    203    135
D12V8, multiclass
        clus
vv       FUBP1 MUTATED FUBP1 WILD-TYPE
  CLUS_1            11             194
  CLUS_2            17             203
  CLUS_3            13             135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FUBP1 MUTATED        1     24     22
  FUBP1 WILD-TYPE    237    167    206
D12V9, multiclass
        clus
vv       FUBP1 MUTATED FUBP1 WILD-TYPE
  CLUS_1             1             237
  CLUS_2            24             167
  CLUS_3            22             206
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FUBP1 MUTATED        0      3     44
  FUBP1 WILD-TYPE    196    188    226
D12V10, multiclass
        clus
vv       FUBP1 MUTATED FUBP1 WILD-TYPE
  CLUS_1             0             196
  CLUS_2             3             188
  CLUS_3            44             226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FUBP1 MUTATED        6      1     19     21
  FUBP1 WILD-TYPE    134    106     64    161
D12V11, multiclass
        clus
vv       FUBP1 MUTATED FUBP1 WILD-TYPE
  CLUS_1             6             134
  CLUS_2             1             106
  CLUS_3            19              64
  CLUS_4            21             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FUBP1 MUTATED       24     22      1
  FUBP1 WILD-TYPE    199    164    102
D12V12, multiclass
        clus
vv       FUBP1 MUTATED FUBP1 WILD-TYPE
  CLUS_1            24             199
  CLUS_2            22             164
  CLUS_3             1             102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FUBP1 MUTATED        6      4     21     16
  FUBP1 WILD-TYPE    121    115     85    140
D12V13, multiclass
        clus
vv       FUBP1 MUTATED FUBP1 WILD-TYPE
  CLUS_1             6             121
  CLUS_2             4             115
  CLUS_3            21              85
  CLUS_4            16             140
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  FUBP1 MUTATED        0      6     15     15      0     11
  FUBP1 WILD-TYPE     99     71    105     42     63     81
D12V14, multiclass
        clus
vv       FUBP1 MUTATED FUBP1 WILD-TYPE
  CLUS_1             0              99
  CLUS_2             6              71
  CLUS_3            15             105
  CLUS_4            15              42
  CLUS_5             0              63
  CLUS_6            11              81
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(13) Variable = PTEN MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTEN MUTATED       27      9     16     23
  PTEN WILD-TYPE     51     32     48     34
D13V1, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           27             51
  CLUS_2            9             32
  CLUS_3           16             48
  CLUS_4           23             34
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTEN MUTATED       18     16      9     32
  PTEN WILD-TYPE     45     34     39     47
D13V2, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           18             45
  CLUS_2           16             34
  CLUS_3            9             39
  CLUS_4           32             47
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTEN MUTATED       26     21     18     22
  PTEN WILD-TYPE     44     77     26     41
D13V3, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           26             44
  CLUS_2           21             77
  CLUS_3           18             26
  CLUS_4           22             41
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PTEN MUTATED       45     21     21
  PTEN WILD-TYPE     93     40     55
D13V4, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           45             93
  CLUS_2           21             40
  CLUS_3           21             55
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PTEN MUTATED       89      8     12
  PTEN WILD-TYPE    203    424     50
D13V5, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           89            203
  CLUS_2            8            424
  CLUS_3           12             50
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTEN MUTATED       46      3      7      1
  PTEN WILD-TYPE    107    220     81    160
D13V6, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           46            107
  CLUS_2            3            220
  CLUS_3            7             81
  CLUS_4            1            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTEN MUTATED       19     13     17     11
  PTEN WILD-TYPE    166    142    121     84
D13V7, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           19            166
  CLUS_2           13            142
  CLUS_3           17            121
  CLUS_4           11             84
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PTEN MUTATED       29     19     12
  PTEN WILD-TYPE    176    201    136
D13V8, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           29            176
  CLUS_2           19            201
  CLUS_3           12            136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PTEN MUTATED       62      3      4
  PTEN WILD-TYPE    176    188    224
D13V9, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           62            176
  CLUS_2            3            188
  CLUS_3            4            224
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PTEN MUTATED       61      4      4
  PTEN WILD-TYPE    135    187    266
D13V10, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           61            135
  CLUS_2            4            187
  CLUS_3            4            266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTEN MUTATED       12      8      1      3
  PTEN WILD-TYPE    128     99     82    179
D13V11, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           12            128
  CLUS_2            8             99
  CLUS_3            1             82
  CLUS_4            3            179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PTEN MUTATED        6      1     17
  PTEN WILD-TYPE    217    185     86
D13V12, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1            6            217
  CLUS_2            1            185
  CLUS_3           17             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTEN MUTATED        8     13      1      2
  PTEN WILD-TYPE    119    106    105    154
D13V13, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1            8            119
  CLUS_2           13            106
  CLUS_3            1            105
  CLUS_4            2            154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  PTEN MUTATED        3      1      0      1     17      2
  PTEN WILD-TYPE     96     76    120     56     46     90
D13V14, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1            3             96
  CLUS_2            1             76
  CLUS_3            0            120
  CLUS_4            1             56
  CLUS_5           17             46
  CLUS_6            2             90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(14) Variable = STK19 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STK19 MUTATED        0      1      0      0
  STK19 WILD-TYPE     78     40     64     57
D14V1, multiclass
[1] "Remove cluster labels:" "STK19 MUTATED"         
clus
  STK19 MUTATED STK19 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STK19 MUTATED        0      0      1      0
  STK19 WILD-TYPE     63     50     47     79
D14V2, multiclass
[1] "Remove cluster labels:" "STK19 MUTATED"         
clus
  STK19 MUTATED STK19 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STK19 MUTATED        0      1      0      0
  STK19 WILD-TYPE     70     97     44     63
D14V3, multiclass
[1] "Remove cluster labels:" "STK19 MUTATED"         
clus
  STK19 MUTATED STK19 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-1597      TCGA-12-3649 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-5299      TCGA-12-5301      TCGA-14-0740      TCGA-14-0781 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK19 MUTATED        1      0      0
  STK19 WILD-TYPE    137     61     76
D14V4, multiclass
[1] "Remove cluster labels:" "STK19 MUTATED"         
clus
  STK19 MUTATED STK19 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-1597      TCGA-12-3649 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-12-5299      TCGA-12-5301      TCGA-14-0740      TCGA-14-0781 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" "STK19 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"STK19 WILD-TYPE" "STK19 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK19 MUTATED        4      7      0
  STK19 WILD-TYPE    288    425     62
D14V5, multiclass
        clus
vv       STK19 MUTATED STK19 WILD-TYPE
  CLUS_1             4             288
  CLUS_2             7             425
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STK19 MUTATED        3      4      2      1
  STK19 WILD-TYPE    150    219     86    160
D14V6, multiclass
        clus
vv       STK19 MUTATED STK19 WILD-TYPE
  CLUS_1             3             150
  CLUS_2             4             219
  CLUS_3             2              86
  CLUS_4             1             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STK19 MUTATED        3      2      0      2
  STK19 WILD-TYPE    182    153    138     93
D14V7, multiclass
        clus
vv       STK19 MUTATED STK19 WILD-TYPE
  CLUS_1             3             182
  CLUS_2             2             153
  CLUS_3             0             138
  CLUS_4             2              93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK19 MUTATED        2      2      3
  STK19 WILD-TYPE    203    218    145
D14V8, multiclass
        clus
vv       STK19 MUTATED STK19 WILD-TYPE
  CLUS_1             2             203
  CLUS_2             2             218
  CLUS_3             3             145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK19 MUTATED        4      5      2
  STK19 WILD-TYPE    234    186    226
D14V9, multiclass
        clus
vv       STK19 MUTATED STK19 WILD-TYPE
  CLUS_1             4             234
  CLUS_2             5             186
  CLUS_3             2             226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK19 MUTATED        3      4      4
  STK19 WILD-TYPE    193    187    266
D14V10, multiclass
        clus
vv       STK19 MUTATED STK19 WILD-TYPE
  CLUS_1             3             193
  CLUS_2             4             187
  CLUS_3             4             266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STK19 MUTATED        1      4      0      5
  STK19 WILD-TYPE    139    103     83    177
D14V11, multiclass
        clus
vv       STK19 MUTATED STK19 WILD-TYPE
  CLUS_1             1             139
  CLUS_2             4             103
  CLUS_3             0              83
  CLUS_4             5             177
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK19 MUTATED        3      4      3
  STK19 WILD-TYPE    220    182    100
D14V12, multiclass
        clus
vv       STK19 MUTATED STK19 WILD-TYPE
  CLUS_1             3             220
  CLUS_2             4             182
  CLUS_3             3             100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STK19 MUTATED        0      6      0      4
  STK19 WILD-TYPE    127    113    106    152
D14V13, multiclass
        clus
vv       STK19 MUTATED STK19 WILD-TYPE
  CLUS_1             0             127
  CLUS_2             6             113
  CLUS_3             0             106
  CLUS_4             4             152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  STK19 MUTATED        1      1      3      0      2      3
  STK19 WILD-TYPE     98     76    117     57     61     89
D14V14, multiclass
        clus
vv       STK19 MUTATED STK19 WILD-TYPE
  CLUS_1             1              98
  CLUS_2             1              76
  CLUS_3             3             117
  CLUS_4             0              57
  CLUS_5             2              61
  CLUS_6             3              89
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(15) Variable = ZMIZ1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZMIZ1 MUTATED        2      1      0      1
  ZMIZ1 WILD-TYPE     76     40     64     56
D15V1, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             2              76
  CLUS_2             1              40
  CLUS_3             0              64
  CLUS_4             1              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZMIZ1 MUTATED        1      1      0      2
  ZMIZ1 WILD-TYPE     62     49     48     77
D15V2, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             1              62
  CLUS_2             1              49
  CLUS_3             0              48
  CLUS_4             2              77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZMIZ1 MUTATED        1      3      0      0
  ZMIZ1 WILD-TYPE     69     95     44     63
D15V3, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             1              69
  CLUS_2             3              95
  CLUS_3             0              44
  CLUS_4             0              63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZMIZ1 MUTATED        1      1      2
  ZMIZ1 WILD-TYPE    137     60     74
D15V4, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             1             137
  CLUS_2             1              60
  CLUS_3             2              74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZMIZ1 MUTATED        2     10      0
  ZMIZ1 WILD-TYPE    290    422     62
D15V5, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             2             290
  CLUS_2            10             422
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZMIZ1 MUTATED        2      2      0      5
  ZMIZ1 WILD-TYPE    151    221     88    156
D15V6, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             2             151
  CLUS_2             2             221
  CLUS_3             0              88
  CLUS_4             5             156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZMIZ1 MUTATED        3      5      0      3
  ZMIZ1 WILD-TYPE    182    150    138     92
D15V7, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             3             182
  CLUS_2             5             150
  CLUS_3             0             138
  CLUS_4             3              92
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZMIZ1 MUTATED        3      2      6
  ZMIZ1 WILD-TYPE    202    218    142
D15V8, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             3             202
  CLUS_2             2             218
  CLUS_3             6             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZMIZ1 MUTATED        3      3      5
  ZMIZ1 WILD-TYPE    235    188    223
D15V9, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             3             235
  CLUS_2             3             188
  CLUS_3             5             223
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZMIZ1 MUTATED        1      4      6
  ZMIZ1 WILD-TYPE    195    187    264
D15V10, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             1             195
  CLUS_2             4             187
  CLUS_3             6             264
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZMIZ1 MUTATED        1      2      3      3
  ZMIZ1 WILD-TYPE    139    105     80    179
D15V11, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             1             139
  CLUS_2             2             105
  CLUS_3             3              80
  CLUS_4             3             179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZMIZ1 MUTATED        5      2      2
  ZMIZ1 WILD-TYPE    218    184    101
D15V12, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             5             218
  CLUS_2             2             184
  CLUS_3             2             101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZMIZ1 MUTATED        0      1      4      4
  ZMIZ1 WILD-TYPE    127    118    102    152
D15V13, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             0             127
  CLUS_2             1             118
  CLUS_3             4             102
  CLUS_4             4             152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  ZMIZ1 MUTATED        0      1      1      3      1      3
  ZMIZ1 WILD-TYPE     99     76    119     54     62     89
D15V14, multiclass
        clus
vv       ZMIZ1 MUTATED ZMIZ1 WILD-TYPE
  CLUS_1             0              99
  CLUS_2             1              76
  CLUS_3             1             119
  CLUS_4             3              54
  CLUS_5             1              62
  CLUS_6             3              89
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(16) Variable = ARID1A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID1A MUTATED        1      0      0      0
  ARID1A WILD-TYPE     77     41     64     57
D16V1, multiclass
[1] "Remove cluster labels:" "ARID1A MUTATED"        
clus
  ARID1A MUTATED ARID1A WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2629       TCGA-19-2631       TCGA-19-4068 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-26-5139       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-2501       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5213       TCGA-28-5214 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-41-3393       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID1A MUTATED        0      0      0      1
  ARID1A WILD-TYPE     63     50     48     78
D16V2, multiclass
[1] "Remove cluster labels:" "ARID1A MUTATED"        
clus
  ARID1A MUTATED ARID1A WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2629       TCGA-19-2631       TCGA-19-4068 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-26-5139       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-2501       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5213       TCGA-28-5214 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-41-3393       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID1A MUTATED        1      0      0      1
  ARID1A WILD-TYPE     69     98     44     62
D16V3, multiclass
[1] "Remove cluster labels:" "ARID1A MUTATED"        
clus
  ARID1A MUTATED ARID1A WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-4097       TCGA-41-5651 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-87-5896 
"ARID1A WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID1A MUTATED        1      1      0
  ARID1A WILD-TYPE    137     60     76
D16V4, multiclass
[1] "Remove cluster labels:" "ARID1A MUTATED"        
clus
  ARID1A MUTATED ARID1A WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-4097       TCGA-41-5651 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" "ARID1A WILD-TYPE" 
      TCGA-87-5896 
"ARID1A WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID1A MUTATED        2     17      2
  ARID1A WILD-TYPE    290    415     60
D16V5, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1              2              290
  CLUS_2             17              415
  CLUS_3              2               60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID1A MUTATED        2      6      1     12
  ARID1A WILD-TYPE    151    217     87    149
D16V6, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1              2              151
  CLUS_2              6              217
  CLUS_3              1               87
  CLUS_4             12              149
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID1A MUTATED        9      4      2      5
  ARID1A WILD-TYPE    176    151    136     90
D16V7, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1              9              176
  CLUS_2              4              151
  CLUS_3              2              136
  CLUS_4              5               90
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID1A MUTATED        7      8      5
  ARID1A WILD-TYPE    198    212    143
D16V8, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1              7              198
  CLUS_2              8              212
  CLUS_3              5              143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID1A MUTATED        2      7     12
  ARID1A WILD-TYPE    236    184    216
D16V9, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1              2              236
  CLUS_2              7              184
  CLUS_3             12              216
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID1A MUTATED        1      5     15
  ARID1A WILD-TYPE    195    186    255
D16V10, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1              1              195
  CLUS_2              5              186
  CLUS_3             15              255
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID1A MUTATED        6      2      5      7
  ARID1A WILD-TYPE    134    105     78    175
D16V11, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1              6              134
  CLUS_2              2              105
  CLUS_3              5               78
  CLUS_4              7              175
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID1A MUTATED       10      8      2
  ARID1A WILD-TYPE    213    178    101
D16V12, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1             10              213
  CLUS_2              8              178
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID1A MUTATED        2      1     10      7
  ARID1A WILD-TYPE    125    118     96    149
D16V13, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1              2              125
  CLUS_2              1              118
  CLUS_3             10               96
  CLUS_4              7              149
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  ARID1A MUTATED        2      3      3      7      1      4
  ARID1A WILD-TYPE     97     74    117     50     62     88
D16V14, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1              2               97
  CLUS_2              3               74
  CLUS_3              3              117
  CLUS_4              7               50
  CLUS_5              1               62
  CLUS_6              4               88
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(17) Variable = NIPBL MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NIPBL MUTATED        1      1      0      0
  NIPBL WILD-TYPE     77     40     64     57
D17V1, multiclass
[1] "Remove cluster labels:" "NIPBL MUTATED"         
clus
  NIPBL MUTATED NIPBL WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0124 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0126      TCGA-06-0128      TCGA-06-0129      TCGA-06-0130 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0132      TCGA-06-0137      TCGA-06-0139      TCGA-06-0140 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0142      TCGA-06-0145      TCGA-06-0152 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0154      TCGA-06-0155      TCGA-06-0157      TCGA-06-0158 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0166      TCGA-06-0167      TCGA-06-0168      TCGA-06-0169 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5859      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0781 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0871      TCGA-14-1456 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5954      TCGA-19-5955 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-5958      TCGA-19-5959      TCGA-19-5960      TCGA-26-1439 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-27-1830 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1836      TCGA-27-1837      TCGA-27-1838 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2527      TCGA-27-2528 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2501      TCGA-28-2502 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-2509      TCGA-28-2510      TCGA-28-2513      TCGA-28-2514 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5204      TCGA-28-5207      TCGA-28-5208      TCGA-28-5209 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NIPBL MUTATED        1      0      0      1
  NIPBL WILD-TYPE     62     50     48     78
D17V2, multiclass
[1] "Remove cluster labels:" "NIPBL MUTATED"         
clus
  NIPBL MUTATED NIPBL WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0124 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0126      TCGA-06-0128      TCGA-06-0129      TCGA-06-0130 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0132      TCGA-06-0137      TCGA-06-0139      TCGA-06-0140 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0142      TCGA-06-0145      TCGA-06-0152 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0154      TCGA-06-0155      TCGA-06-0157      TCGA-06-0158 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0166      TCGA-06-0167      TCGA-06-0168      TCGA-06-0169 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5859      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0781 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0871      TCGA-14-1456 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5954      TCGA-19-5955 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-5958      TCGA-19-5959      TCGA-19-5960      TCGA-26-1439 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-27-1830 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1836      TCGA-27-1837      TCGA-27-1838 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2527      TCGA-27-2528 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2501      TCGA-28-2502 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-2509      TCGA-28-2510      TCGA-28-2513      TCGA-28-2514 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5204      TCGA-28-5207      TCGA-28-5208      TCGA-28-5209 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NIPBL MUTATED        2      0      0      0
  NIPBL WILD-TYPE     68     98     44     63
D17V3, multiclass
[1] "Remove cluster labels:" "NIPBL MUTATED"         
clus
  NIPBL MUTATED NIPBL WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0137      TCGA-06-0139      TCGA-06-0140 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0142      TCGA-06-0145      TCGA-06-0151 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0168      TCGA-06-0169 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-1806 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5859      TCGA-06-6388      TCGA-06-6389 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-06-6693      TCGA-06-6694 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-6695      TCGA-06-6697      TCGA-06-6698      TCGA-06-6699 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-6700      TCGA-06-6701      TCGA-08-0386      TCGA-12-0616 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0740      TCGA-14-0781      TCGA-14-0786 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-0787      TCGA-14-0789      TCGA-14-0790      TCGA-14-0813 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-0817      TCGA-14-0862      TCGA-14-0871      TCGA-14-1043 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-1395      TCGA-14-1450      TCGA-14-1456      TCGA-14-1823 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-1825      TCGA-14-1829      TCGA-14-2554      TCGA-14-3476 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-4157      TCGA-15-0742      TCGA-15-1444      TCGA-16-0846 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-16-0861      TCGA-16-1045      TCGA-16-1048      TCGA-19-1390 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-1790      TCGA-19-2619      TCGA-19-2620      TCGA-19-2623 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-2624      TCGA-19-2625      TCGA-19-2629      TCGA-19-2631 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-4068      TCGA-19-5947      TCGA-19-5950      TCGA-19-5951 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-5952      TCGA-19-5953      TCGA-19-5954      TCGA-19-5955 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-5958      TCGA-19-5959      TCGA-19-5960      TCGA-26-1439 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-26-6173 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-26-6174      TCGA-27-1830      TCGA-27-1831      TCGA-27-1832 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-1833      TCGA-27-1834      TCGA-27-1835      TCGA-27-1836 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-1837      TCGA-27-1838      TCGA-27-2518      TCGA-27-2519 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-2521      TCGA-27-2523      TCGA-27-2524      TCGA-27-2526 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-2527      TCGA-27-2528      TCGA-28-1747      TCGA-28-1753 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5211      TCGA-28-5213      TCGA-28-5214 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5219 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5220      TCGA-28-6450      TCGA-32-1970      TCGA-32-1977 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-87-5896 
"NIPBL WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NIPBL MUTATED        1      0      1
  NIPBL WILD-TYPE    137     61     75
D17V4, multiclass
[1] "Remove cluster labels:" "NIPBL MUTATED"         
clus
  NIPBL MUTATED NIPBL WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0137      TCGA-06-0139      TCGA-06-0140 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0142      TCGA-06-0145      TCGA-06-0151 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0168      TCGA-06-0169 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-1806 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5859      TCGA-06-6388      TCGA-06-6389 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-06-6693      TCGA-06-6694 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-6695      TCGA-06-6697      TCGA-06-6698      TCGA-06-6699 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-06-6700      TCGA-06-6701      TCGA-08-0386      TCGA-12-0616 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0740      TCGA-14-0781      TCGA-14-0786 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-0787      TCGA-14-0789      TCGA-14-0790      TCGA-14-0813 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-0817      TCGA-14-0862      TCGA-14-0871      TCGA-14-1043 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-1395      TCGA-14-1450      TCGA-14-1456      TCGA-14-1823 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-1825      TCGA-14-1829      TCGA-14-2554      TCGA-14-3476 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-14-4157      TCGA-15-0742      TCGA-15-1444      TCGA-16-0846 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-16-0861      TCGA-16-1045      TCGA-16-1048      TCGA-19-1390 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-1790      TCGA-19-2619      TCGA-19-2620      TCGA-19-2623 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-2624      TCGA-19-2625      TCGA-19-2629      TCGA-19-2631 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-4068      TCGA-19-5947      TCGA-19-5950      TCGA-19-5951 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-5952      TCGA-19-5953      TCGA-19-5954      TCGA-19-5955 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-19-5958      TCGA-19-5959      TCGA-19-5960      TCGA-26-1439 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-26-6173 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-26-6174      TCGA-27-1830      TCGA-27-1831      TCGA-27-1832 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-1833      TCGA-27-1834      TCGA-27-1835      TCGA-27-1836 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-1837      TCGA-27-1838      TCGA-27-2518      TCGA-27-2519 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-2521      TCGA-27-2523      TCGA-27-2524      TCGA-27-2526 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-27-2527      TCGA-27-2528      TCGA-28-1747      TCGA-28-1753 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5211      TCGA-28-5213      TCGA-28-5214 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5219 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-28-5220      TCGA-28-6450      TCGA-32-1970      TCGA-32-1977 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" "NIPBL WILD-TYPE" 
     TCGA-87-5896 
"NIPBL WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NIPBL MUTATED        4     15      1
  NIPBL WILD-TYPE    288    417     61
D17V5, multiclass
        clus
vv       NIPBL MUTATED NIPBL WILD-TYPE
  CLUS_1             4             288
  CLUS_2            15             417
  CLUS_3             1              61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NIPBL MUTATED        3      2      0     14
  NIPBL WILD-TYPE    150    221     88    147
D17V6, multiclass
        clus
vv       NIPBL MUTATED NIPBL WILD-TYPE
  CLUS_1             3             150
  CLUS_2             2             221
  CLUS_3             0              88
  CLUS_4            14             147
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NIPBL MUTATED        6      2      4      3
  NIPBL WILD-TYPE    179    153    134     92
D17V7, multiclass
        clus
vv       NIPBL MUTATED NIPBL WILD-TYPE
  CLUS_1             6             179
  CLUS_2             2             153
  CLUS_3             4             134
  CLUS_4             3              92
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NIPBL MUTATED        6      7      2
  NIPBL WILD-TYPE    199    213    146
D17V8, multiclass
        clus
vv       NIPBL MUTATED NIPBL WILD-TYPE
  CLUS_1             6             199
  CLUS_2             7             213
  CLUS_3             2             146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NIPBL MUTATED        3      4     12
  NIPBL WILD-TYPE    235    187    216
D17V9, multiclass
        clus
vv       NIPBL MUTATED NIPBL WILD-TYPE
  CLUS_1             3             235
  CLUS_2             4             187
  CLUS_3            12             216
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NIPBL MUTATED        2      4     13
  NIPBL WILD-TYPE    194    187    257
D17V10, multiclass
        clus
vv       NIPBL MUTATED NIPBL WILD-TYPE
  CLUS_1             2             194
  CLUS_2             4             187
  CLUS_3            13             257
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NIPBL MUTATED        5      4      5      4
  NIPBL WILD-TYPE    135    103     78    178
D17V11, multiclass
        clus
vv       NIPBL MUTATED NIPBL WILD-TYPE
  CLUS_1             5             135
  CLUS_2             4             103
  CLUS_3             5              78
  CLUS_4             4             178
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NIPBL MUTATED       12      4      2
  NIPBL WILD-TYPE    211    182    101
D17V12, multiclass
        clus
vv       NIPBL MUTATED NIPBL WILD-TYPE
  CLUS_1            12             211
  CLUS_2             4             182
  CLUS_3             2             101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NIPBL MUTATED        2      4      9      3
  NIPBL WILD-TYPE    125    115     97    153
D17V13, multiclass
        clus
vv       NIPBL MUTATED NIPBL WILD-TYPE
  CLUS_1             2             125
  CLUS_2             4             115
  CLUS_3             9              97
  CLUS_4             3             153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  NIPBL MUTATED        3      3      2      7      1      2
  NIPBL WILD-TYPE     96     74    118     50     62     90
D17V14, multiclass
        clus
vv       NIPBL MUTATED NIPBL WILD-TYPE
  CLUS_1             3              96
  CLUS_2             3              74
  CLUS_3             2             118
  CLUS_4             7              50
  CLUS_5             1              62
  CLUS_6             2              90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(18) Variable = GAGE2A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GAGE2A MUTATED        0      0      0      0
  GAGE2A WILD-TYPE     78     41     64     57
D18V1, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GAGE2A MUTATED        0      0      0      0
  GAGE2A WILD-TYPE     63     50     48     79
D18V2, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GAGE2A MUTATED        0      0      0      0
  GAGE2A WILD-TYPE     70     98     44     63
D18V3, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GAGE2A MUTATED        0      0      0
  GAGE2A WILD-TYPE    138     61     76
D18V4, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GAGE2A MUTATED        1      6      1
  GAGE2A WILD-TYPE    291    426     61
D18V5, multiclass
        clus
vv       GAGE2A MUTATED GAGE2A WILD-TYPE
  CLUS_1              1              291
  CLUS_2              6              426
  CLUS_3              1               61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GAGE2A MUTATED        1      4      0      3
  GAGE2A WILD-TYPE    152    219     88    158
D18V6, multiclass
        clus
vv       GAGE2A MUTATED GAGE2A WILD-TYPE
  CLUS_1              1              152
  CLUS_2              4              219
  CLUS_3              0               88
  CLUS_4              3              158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GAGE2A MUTATED        3      3      2      0
  GAGE2A WILD-TYPE    182    152    136     95
D18V7, multiclass
        clus
vv       GAGE2A MUTATED GAGE2A WILD-TYPE
  CLUS_1              3              182
  CLUS_2              3              152
  CLUS_3              2              136
  CLUS_4              0               95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GAGE2A MUTATED        4      1      3
  GAGE2A WILD-TYPE    201    219    145
D18V8, multiclass
        clus
vv       GAGE2A MUTATED GAGE2A WILD-TYPE
  CLUS_1              4              201
  CLUS_2              1              219
  CLUS_3              3              145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GAGE2A MUTATED        2      3      3
  GAGE2A WILD-TYPE    236    188    225
D18V9, multiclass
        clus
vv       GAGE2A MUTATED GAGE2A WILD-TYPE
  CLUS_1              2              236
  CLUS_2              3              188
  CLUS_3              3              225
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GAGE2A MUTATED        1      3      4
  GAGE2A WILD-TYPE    195    188    266
D18V10, multiclass
        clus
vv       GAGE2A MUTATED GAGE2A WILD-TYPE
  CLUS_1              1              195
  CLUS_2              3              188
  CLUS_3              4              266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GAGE2A MUTATED        1      3      1      3
  GAGE2A WILD-TYPE    139    104     82    179
D18V11, multiclass
        clus
vv       GAGE2A MUTATED GAGE2A WILD-TYPE
  CLUS_1              1              139
  CLUS_2              3              104
  CLUS_3              1               82
  CLUS_4              3              179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GAGE2A MUTATED        3      3      2
  GAGE2A WILD-TYPE    220    183    101
D18V12, multiclass
        clus
vv       GAGE2A MUTATED GAGE2A WILD-TYPE
  CLUS_1              3              220
  CLUS_2              3              183
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GAGE2A MUTATED        0      4      1      3
  GAGE2A WILD-TYPE    127    115    105    153
D18V13, multiclass
        clus
vv       GAGE2A MUTATED GAGE2A WILD-TYPE
  CLUS_1              0              127
  CLUS_2              4              115
  CLUS_3              1              105
  CLUS_4              3              153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  GAGE2A MUTATED        1      3      2      0      1      1
  GAGE2A WILD-TYPE     98     74    118     57     62     91
D18V14, multiclass
        clus
vv       GAGE2A MUTATED GAGE2A WILD-TYPE
  CLUS_1              1               98
  CLUS_2              3               74
  CLUS_3              2              118
  CLUS_4              0               57
  CLUS_5              1               62
  CLUS_6              1               91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(19) Variable = NUDT11 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUDT11 MUTATED        0      0      0      0
  NUDT11 WILD-TYPE     78     41     64     57
D19V1, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUDT11 MUTATED        0      0      0      0
  NUDT11 WILD-TYPE     63     50     48     79
D19V2, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUDT11 MUTATED        0      0      0      0
  NUDT11 WILD-TYPE     70     98     44     63
D19V3, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NUDT11 MUTATED        0      0      0
  NUDT11 WILD-TYPE    138     61     76
D19V4, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NUDT11 MUTATED        1      9      1
  NUDT11 WILD-TYPE    291    423     61
D19V5, multiclass
        clus
vv       NUDT11 MUTATED NUDT11 WILD-TYPE
  CLUS_1              1              291
  CLUS_2              9              423
  CLUS_3              1               61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUDT11 MUTATED        1      6      0      4
  NUDT11 WILD-TYPE    152    217     88    157
D19V6, multiclass
        clus
vv       NUDT11 MUTATED NUDT11 WILD-TYPE
  CLUS_1              1              152
  CLUS_2              6              217
  CLUS_3              0               88
  CLUS_4              4              157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUDT11 MUTATED        5      2      3      1
  NUDT11 WILD-TYPE    180    153    135     94
D19V7, multiclass
        clus
vv       NUDT11 MUTATED NUDT11 WILD-TYPE
  CLUS_1              5              180
  CLUS_2              2              153
  CLUS_3              3              135
  CLUS_4              1               94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NUDT11 MUTATED        6      2      3
  NUDT11 WILD-TYPE    199    218    145
D19V8, multiclass
        clus
vv       NUDT11 MUTATED NUDT11 WILD-TYPE
  CLUS_1              6              199
  CLUS_2              2              218
  CLUS_3              3              145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NUDT11 MUTATED        2      3      6
  NUDT11 WILD-TYPE    236    188    222
D19V9, multiclass
        clus
vv       NUDT11 MUTATED NUDT11 WILD-TYPE
  CLUS_1              2              236
  CLUS_2              3              188
  CLUS_3              6              222
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NUDT11 MUTATED        0      7      4
  NUDT11 WILD-TYPE    196    184    266
D19V10, multiclass
        clus
vv       NUDT11 MUTATED NUDT11 WILD-TYPE
  CLUS_1              0              196
  CLUS_2              7              184
  CLUS_3              4              266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUDT11 MUTATED        1      4      4      1
  NUDT11 WILD-TYPE    139    103     79    181
D19V11, multiclass
        clus
vv       NUDT11 MUTATED NUDT11 WILD-TYPE
  CLUS_1              1              139
  CLUS_2              4              103
  CLUS_3              4               79
  CLUS_4              1              181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NUDT11 MUTATED        5      3      2
  NUDT11 WILD-TYPE    218    183    101
D19V12, multiclass
        clus
vv       NUDT11 MUTATED NUDT11 WILD-TYPE
  CLUS_1              5              218
  CLUS_2              3              183
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUDT11 MUTATED        1      4      2      3
  NUDT11 WILD-TYPE    126    115    104    153
D19V13, multiclass
        clus
vv       NUDT11 MUTATED NUDT11 WILD-TYPE
  CLUS_1              1              126
  CLUS_2              4              115
  CLUS_3              2              104
  CLUS_4              3              153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  NUDT11 MUTATED        2      3      1      0      0      4
  NUDT11 WILD-TYPE     97     74    119     57     63     88
D19V14, multiclass
        clus
vv       NUDT11 MUTATED NUDT11 WILD-TYPE
  CLUS_1              2               97
  CLUS_2              3               74
  CLUS_3              1              119
  CLUS_4              0               57
  CLUS_5              0               63
  CLUS_6              4               88
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(20) Variable = CREBZF MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CREBZF MUTATED        1      0      0      1
  CREBZF WILD-TYPE     77     41     64     56
D20V1, multiclass
[1] "Remove cluster labels:" "CREBZF MUTATED"        
clus
  CREBZF MUTATED CREBZF WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0130 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0132       TCGA-06-0137       TCGA-06-0139       TCGA-06-0140 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0142       TCGA-06-0145       TCGA-06-0152 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0154       TCGA-06-0155       TCGA-06-0157       TCGA-06-0158 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0166       TCGA-06-0167       TCGA-06-0168       TCGA-06-0169 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4209 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CREBZF MUTATED        0      2      0      0
  CREBZF WILD-TYPE     63     48     48     79
D20V2, multiclass
[1] "Remove cluster labels:" "CREBZF MUTATED"        
clus
  CREBZF MUTATED CREBZF WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0130 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0132       TCGA-06-0137       TCGA-06-0139       TCGA-06-0140 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0142       TCGA-06-0145       TCGA-06-0152 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0154       TCGA-06-0155       TCGA-06-0157       TCGA-06-0158 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0166       TCGA-06-0167       TCGA-06-0168       TCGA-06-0169 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4209 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CREBZF MUTATED        0      2      0      0
  CREBZF WILD-TYPE     70     96     44     63
D20V3, multiclass
[1] "Remove cluster labels:" "CREBZF MUTATED"        
clus
  CREBZF MUTATED CREBZF WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0137       TCGA-06-0139       TCGA-06-0140 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0142       TCGA-06-0145       TCGA-06-0151 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0168       TCGA-06-0169 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-1806 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-87-5896 
"CREBZF WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CREBZF MUTATED        2      0      0
  CREBZF WILD-TYPE    136     61     76
D20V4, multiclass
[1] "Remove cluster labels:" "CREBZF MUTATED"        
clus
  CREBZF MUTATED CREBZF WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0137       TCGA-06-0139       TCGA-06-0140 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0142       TCGA-06-0145       TCGA-06-0151 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0168       TCGA-06-0169 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-1806 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" "CREBZF WILD-TYPE" 
      TCGA-87-5896 
"CREBZF WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CREBZF MUTATED        0      9      0
  CREBZF WILD-TYPE    292    423     62
D20V5, multiclass
        clus
vv       CREBZF MUTATED CREBZF WILD-TYPE
  CLUS_1              0              292
  CLUS_2              9              423
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CREBZF MUTATED        0      0      0      7
  CREBZF WILD-TYPE    153    223     88    154
D20V6, multiclass
        clus
vv       CREBZF MUTATED CREBZF WILD-TYPE
  CLUS_1              0              153
  CLUS_2              0              223
  CLUS_3              0               88
  CLUS_4              7              154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CREBZF MUTATED        0      4      4      0
  CREBZF WILD-TYPE    185    151    134     95
D20V7, multiclass
        clus
vv       CREBZF MUTATED CREBZF WILD-TYPE
  CLUS_1              0              185
  CLUS_2              4              151
  CLUS_3              4              134
  CLUS_4              0               95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CREBZF MUTATED        1      4      3
  CREBZF WILD-TYPE    204    216    145
D20V8, multiclass
        clus
vv       CREBZF MUTATED CREBZF WILD-TYPE
  CLUS_1              1              204
  CLUS_2              4              216
  CLUS_3              3              145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CREBZF MUTATED        2      6      0
  CREBZF WILD-TYPE    236    185    228
D20V9, multiclass
        clus
vv       CREBZF MUTATED CREBZF WILD-TYPE
  CLUS_1              2              236
  CLUS_2              6              185
  CLUS_3              0              228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CREBZF MUTATED        0      2      6
  CREBZF WILD-TYPE    196    189    264
D20V10, multiclass
        clus
vv       CREBZF MUTATED CREBZF WILD-TYPE
  CLUS_1              0              196
  CLUS_2              2              189
  CLUS_3              6              264
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CREBZF MUTATED        0      1      1      5
  CREBZF WILD-TYPE    140    106     82    177
D20V11, multiclass
        clus
vv       CREBZF MUTATED CREBZF WILD-TYPE
  CLUS_1              0              140
  CLUS_2              1              106
  CLUS_3              1               82
  CLUS_4              5              177
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CREBZF MUTATED        0      6      1
  CREBZF WILD-TYPE    223    180    102
D20V12, multiclass
        clus
vv       CREBZF MUTATED CREBZF WILD-TYPE
  CLUS_1              0              223
  CLUS_2              6              180
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CREBZF MUTATED        0      1      2      4
  CREBZF WILD-TYPE    127    118    104    152
D20V13, multiclass
        clus
vv       CREBZF MUTATED CREBZF WILD-TYPE
  CLUS_1              0              127
  CLUS_2              1              118
  CLUS_3              2              104
  CLUS_4              4              152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  CREBZF MUTATED        0      1      4      0      0      2
  CREBZF WILD-TYPE     99     76    116     57     63     90
D20V14, multiclass
        clus
vv       CREBZF MUTATED CREBZF WILD-TYPE
  CLUS_1              0               99
  CLUS_2              1               76
  CLUS_3              4              116
  CLUS_4              0               57
  CLUS_5              0               63
  CLUS_6              2               90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(21) Variable = SLC26A3 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC26A3 MUTATED        1      1      2      2
  SLC26A3 WILD-TYPE     77     40     62     55
D21V1, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               1                77
  CLUS_2               1                40
  CLUS_3               2                62
  CLUS_4               2                55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC26A3 MUTATED        2      1      2      1
  SLC26A3 WILD-TYPE     61     49     46     78
D21V2, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               2                61
  CLUS_2               1                49
  CLUS_3               2                46
  CLUS_4               1                78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC26A3 MUTATED        1      4      0      2
  SLC26A3 WILD-TYPE     69     94     44     61
D21V3, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               1                69
  CLUS_2               4                94
  CLUS_3               0                44
  CLUS_4               2                61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC26A3 MUTATED        4      0      3
  SLC26A3 WILD-TYPE    134     61     73
D21V4, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               4               134
  CLUS_2               0                61
  CLUS_3               3                73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC26A3 MUTATED        9      1      1
  SLC26A3 WILD-TYPE    283    431     61
D21V5, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               9               283
  CLUS_2               1               431
  CLUS_3               1                61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC26A3 MUTATED        5      1      0      0
  SLC26A3 WILD-TYPE    148    222     88    161
D21V6, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               5               148
  CLUS_2               1               222
  CLUS_3               0                88
  CLUS_4               0               161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC26A3 MUTATED        5      0      3      0
  SLC26A3 WILD-TYPE    180    155    135     95
D21V7, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               5               180
  CLUS_2               0               155
  CLUS_3               3               135
  CLUS_4               0                95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC26A3 MUTATED        6      2      0
  SLC26A3 WILD-TYPE    199    218    148
D21V8, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               6               199
  CLUS_2               2               218
  CLUS_3               0               148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC26A3 MUTATED        7      0      1
  SLC26A3 WILD-TYPE    231    191    227
D21V9, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               7               231
  CLUS_2               0               191
  CLUS_3               1               227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC26A3 MUTATED        6      2      0
  SLC26A3 WILD-TYPE    190    189    270
D21V10, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               6               190
  CLUS_2               2               189
  CLUS_3               0               270
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC26A3 MUTATED        1      3      0      0
  SLC26A3 WILD-TYPE    139    104     83    182
D21V11, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               1               139
  CLUS_2               3               104
  CLUS_3               0                83
  CLUS_4               0               182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC26A3 MUTATED        1      0      3
  SLC26A3 WILD-TYPE    222    186    100
D21V12, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               1               222
  CLUS_2               0               186
  CLUS_3               3               100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC26A3 MUTATED        1      1      1      1
  SLC26A3 WILD-TYPE    126    118    105    155
D21V13, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               1               126
  CLUS_2               1               118
  CLUS_3               1               105
  CLUS_4               1               155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  SLC26A3 MUTATED        1      0      0      0      2      1
  SLC26A3 WILD-TYPE     98     77    120     57     61     91
D21V14, multiclass
        clus
vv       SLC26A3 MUTATED SLC26A3 WILD-TYPE
  CLUS_1               1                98
  CLUS_2               0                77
  CLUS_3               0               120
  CLUS_4               0                57
  CLUS_5               2                61
  CLUS_6               1                91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(22) Variable = PLCG1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCG1 MUTATED        2      0      1      2
  PLCG1 WILD-TYPE     76     41     63     55
D22V1, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             2              76
  CLUS_2             0              41
  CLUS_3             1              63
  CLUS_4             2              55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCG1 MUTATED        2      1      1      1
  PLCG1 WILD-TYPE     61     49     47     78
D22V2, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             2              61
  CLUS_2             1              49
  CLUS_3             1              47
  CLUS_4             1              78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCG1 MUTATED        2      1      1      1
  PLCG1 WILD-TYPE     68     97     43     62
D22V3, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             2              68
  CLUS_2             1              97
  CLUS_3             1              43
  CLUS_4             1              62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCG1 MUTATED        2      1      2
  PLCG1 WILD-TYPE    136     60     74
D22V4, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             2             136
  CLUS_2             1              60
  CLUS_3             2              74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCG1 MUTATED        9      2      0
  PLCG1 WILD-TYPE    283    430     62
D22V5, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             9             283
  CLUS_2             2             430
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCG1 MUTATED        4      1      1      1
  PLCG1 WILD-TYPE    149    222     87    160
D22V6, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             4             149
  CLUS_2             1             222
  CLUS_3             1              87
  CLUS_4             1             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCG1 MUTATED        1      0      2      2
  PLCG1 WILD-TYPE    184    155    136     93
D22V7, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             1             184
  CLUS_2             0             155
  CLUS_3             2             136
  CLUS_4             2              93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCG1 MUTATED        2      2      1
  PLCG1 WILD-TYPE    203    218    147
D22V8, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             2             203
  CLUS_2             2             218
  CLUS_3             1             147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCG1 MUTATED        4      1      2
  PLCG1 WILD-TYPE    234    190    226
D22V9, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             4             234
  CLUS_2             1             190
  CLUS_3             2             226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCG1 MUTATED        4      2      1
  PLCG1 WILD-TYPE    192    189    269
D22V10, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             4             192
  CLUS_2             2             189
  CLUS_3             1             269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCG1 MUTATED        5      0      0      1
  PLCG1 WILD-TYPE    135    107     83    181
D22V11, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             5             135
  CLUS_2             0             107
  CLUS_3             0              83
  CLUS_4             1             181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLCG1 MUTATED        3      0      3
  PLCG1 WILD-TYPE    220    186    100
D22V12, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             3             220
  CLUS_2             0             186
  CLUS_3             3             100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLCG1 MUTATED        3      3      0      0
  PLCG1 WILD-TYPE    124    116    106    156
D22V13, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             3             124
  CLUS_2             3             116
  CLUS_3             0             106
  CLUS_4             0             156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  PLCG1 MUTATED        0      2      0      0      3      1
  PLCG1 WILD-TYPE     99     75    120     57     60     91
D22V14, multiclass
        clus
vv       PLCG1 MUTATED PLCG1 WILD-TYPE
  CLUS_1             0              99
  CLUS_2             2              75
  CLUS_3             0             120
  CLUS_4             0              57
  CLUS_5             3              60
  CLUS_6             1              91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(23) Variable = SEMG1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEMG1 MUTATED        2      1      3      2
  SEMG1 WILD-TYPE     76     40     61     55
D23V1, multiclass
        clus
vv       SEMG1 MUTATED SEMG1 WILD-TYPE
  CLUS_1             2              76
  CLUS_2             1              40
  CLUS_3             3              61
  CLUS_4             2              55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEMG1 MUTATED        0      2      1      5
  SEMG1 WILD-TYPE     63     48     47     74
D23V2, multiclass
        clus
vv       SEMG1 MUTATED SEMG1 WILD-TYPE
  CLUS_1             0              63
  CLUS_2             2              48
  CLUS_3             1              47
  CLUS_4             5              74
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEMG1 MUTATED        2      4      1      1
  SEMG1 WILD-TYPE     68     94     43     62
D23V3, multiclass
        clus
vv       SEMG1 MUTATED SEMG1 WILD-TYPE
  CLUS_1             2              68
  CLUS_2             4              94
  CLUS_3             1              43
  CLUS_4             1              62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SEMG1 MUTATED        4      2      2
  SEMG1 WILD-TYPE    134     59     74
D23V4, multiclass
        clus
vv       SEMG1 MUTATED SEMG1 WILD-TYPE
  CLUS_1             4             134
  CLUS_2             2              59
  CLUS_3             2              74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SEMG1 MUTATED       11      0      0
  SEMG1 WILD-TYPE    281    432     62
D23V5, multiclass
        clus
vv       SEMG1 MUTATED SEMG1 WILD-TYPE
  CLUS_1            11             281
  CLUS_2             0             432
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEMG1 MUTATED        4      0      0      0
  SEMG1 WILD-TYPE    149    223     88    161
D23V6, multiclass
        clus
vv       SEMG1 MUTATED SEMG1 WILD-TYPE
  CLUS_1             4             149
  CLUS_2             0             223
  CLUS_3             0              88
  CLUS_4             0             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEMG1 MUTATED        1      0      2      0
  SEMG1 WILD-TYPE    184    155    136     95
D23V7, multiclass
        clus
vv       SEMG1 MUTATED SEMG1 WILD-TYPE
  CLUS_1             1             184
  CLUS_2             0             155
  CLUS_3             2             136
  CLUS_4             0              95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SEMG1 MUTATED        1      2      0
  SEMG1 WILD-TYPE    204    218    148
D23V8, multiclass
        clus
vv       SEMG1 MUTATED SEMG1 WILD-TYPE
  CLUS_1             1             204
  CLUS_2             2             218
  CLUS_3             0             148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SEMG1 MUTATED        6      0      0
  SEMG1 WILD-TYPE    232    191    228
D23V9, multiclass
        clus
vv       SEMG1 MUTATED SEMG1 WILD-TYPE
  CLUS_1             6             232
  CLUS_2             0             191
  CLUS_3             0             228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SEMG1 MUTATED        5      1      0
  SEMG1 WILD-TYPE    191    190    270
D23V10, multiclass
        clus
vv       SEMG1 MUTATED SEMG1 WILD-TYPE
  CLUS_1             5             191
  CLUS_2             1             190
  CLUS_3             0             270
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEMG1 MUTATED        1      2      0      0
  SEMG1 WILD-TYPE    139    105     83    182
D23V11, multiclass
        clus
vv       SEMG1 MUTATED SEMG1 WILD-TYPE
  CLUS_1             1             139
  CLUS_2             2             105
  CLUS_3             0              83
  CLUS_4             0             182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SEMG1 MUTATED        1      0      2
  SEMG1 WILD-TYPE    222    186    101
D23V12, multiclass
        clus
vv       SEMG1 MUTATED SEMG1 WILD-TYPE
  CLUS_1             1             222
  CLUS_2             0             186
  CLUS_3             2             101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEMG1 MUTATED        0      2      0      1
  SEMG1 WILD-TYPE    127    117    106    155
D23V13, multiclass
        clus
vv       SEMG1 MUTATED SEMG1 WILD-TYPE
  CLUS_1             0             127
  CLUS_2             2             117
  CLUS_3             0             106
  CLUS_4             1             155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  SEMG1 MUTATED        1      0      0      0      1      1
  SEMG1 WILD-TYPE     98     77    120     57     62     91
D23V14, multiclass
        clus
vv       SEMG1 MUTATED SEMG1 WILD-TYPE
  CLUS_1             1              98
  CLUS_2             0              77
  CLUS_3             0             120
  CLUS_4             0              57
  CLUS_5             1              62
  CLUS_6             1              91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(24) Variable = NUP210L MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUP210L MUTATED        1      2      2      1
  NUP210L WILD-TYPE     77     39     62     56
D24V1, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               1                77
  CLUS_2               2                39
  CLUS_3               2                62
  CLUS_4               1                56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUP210L MUTATED        0      2      1      3
  NUP210L WILD-TYPE     63     48     47     76
D24V2, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               0                63
  CLUS_2               2                48
  CLUS_3               1                47
  CLUS_4               3                76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUP210L MUTATED        3      3      2      0
  NUP210L WILD-TYPE     67     95     42     63
D24V3, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               3                67
  CLUS_2               3                95
  CLUS_3               2                42
  CLUS_4               0                63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  NUP210L MUTATED        5      0      3
  NUP210L WILD-TYPE    133     61     73
D24V4, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               5               133
  CLUS_2               0                61
  CLUS_3               3                73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  NUP210L MUTATED        8      3      0
  NUP210L WILD-TYPE    284    429     62
D24V5, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               8               284
  CLUS_2               3               429
  CLUS_3               0                62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUP210L MUTATED        7      1      0      1
  NUP210L WILD-TYPE    146    222     88    160
D24V6, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               7               146
  CLUS_2               1               222
  CLUS_3               0                88
  CLUS_4               1               160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUP210L MUTATED        2      4      3      0
  NUP210L WILD-TYPE    183    151    135     95
D24V7, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               2               183
  CLUS_2               4               151
  CLUS_3               3               135
  CLUS_4               0                95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  NUP210L MUTATED        3      4      2
  NUP210L WILD-TYPE    202    216    146
D24V8, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               3               202
  CLUS_2               4               216
  CLUS_3               2               146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  NUP210L MUTATED        6      2      0
  NUP210L WILD-TYPE    232    189    228
D24V9, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               6               232
  CLUS_2               2               189
  CLUS_3               0               228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  NUP210L MUTATED        5      1      2
  NUP210L WILD-TYPE    191    190    268
D24V10, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               5               191
  CLUS_2               1               190
  CLUS_3               2               268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUP210L MUTATED        0      2      0      2
  NUP210L WILD-TYPE    140    105     83    180
D24V11, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               0               140
  CLUS_2               2               105
  CLUS_3               0                83
  CLUS_4               2               180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  NUP210L MUTATED        0      2      2
  NUP210L WILD-TYPE    223    184    101
D24V12, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               0               223
  CLUS_2               2               184
  CLUS_3               2               101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUP210L MUTATED        1      0      0      3
  NUP210L WILD-TYPE    126    119    106    153
D24V13, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               1               126
  CLUS_2               0               119
  CLUS_3               0               106
  CLUS_4               3               153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  NUP210L MUTATED        0      0      2      0      1      1
  NUP210L WILD-TYPE     99     77    118     57     62     91
D24V14, multiclass
        clus
vv       NUP210L MUTATED NUP210L WILD-TYPE
  CLUS_1               0                99
  CLUS_2               0                77
  CLUS_3               2               118
  CLUS_4               0                57
  CLUS_5               1                62
  CLUS_6               1                91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(25) Variable = PDGFRA MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDGFRA MUTATED        2      6      1      1
  PDGFRA WILD-TYPE     76     35     63     56
D25V1, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1              2               76
  CLUS_2              6               35
  CLUS_3              1               63
  CLUS_4              1               56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDGFRA MUTATED        1      5      2      2
  PDGFRA WILD-TYPE     62     45     46     77
D25V2, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1              1               62
  CLUS_2              5               45
  CLUS_3              2               46
  CLUS_4              2               77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDGFRA MUTATED        3      4      2      2
  PDGFRA WILD-TYPE     67     94     42     61
D25V3, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1              3               67
  CLUS_2              4               94
  CLUS_3              2               42
  CLUS_4              2               61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PDGFRA MUTATED        9      1      1
  PDGFRA WILD-TYPE    129     60     75
D25V4, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1              9              129
  CLUS_2              1               60
  CLUS_3              1               75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PDGFRA MUTATED       11      8      2
  PDGFRA WILD-TYPE    281    424     60
D25V5, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1             11              281
  CLUS_2              8              424
  CLUS_3              2               60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDGFRA MUTATED        6      3      1      2
  PDGFRA WILD-TYPE    147    220     87    159
D25V6, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1              6              147
  CLUS_2              3              220
  CLUS_3              1               87
  CLUS_4              2              159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDGFRA MUTATED        6      1      5      1
  PDGFRA WILD-TYPE    179    154    133     94
D25V7, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1              6              179
  CLUS_2              1              154
  CLUS_3              5              133
  CLUS_4              1               94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PDGFRA MUTATED       10      1      2
  PDGFRA WILD-TYPE    195    219    146
D25V8, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1             10              195
  CLUS_2              1              219
  CLUS_3              2              146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PDGFRA MUTATED       13      1      2
  PDGFRA WILD-TYPE    225    190    226
D25V9, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1             13              225
  CLUS_2              1              190
  CLUS_3              2              226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PDGFRA MUTATED        9      5      2
  PDGFRA WILD-TYPE    187    186    268
D25V10, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1              9              187
  CLUS_2              5              186
  CLUS_3              2              268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDGFRA MUTATED        1      7      2      0
  PDGFRA WILD-TYPE    139    100     81    182
D25V11, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1              1              139
  CLUS_2              7              100
  CLUS_3              2               81
  CLUS_4              0              182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PDGFRA MUTATED        2      1      7
  PDGFRA WILD-TYPE    221    185     96
D25V12, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1              2              221
  CLUS_2              1              185
  CLUS_3              7               96
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDGFRA MUTATED        3      3      2      2
  PDGFRA WILD-TYPE    124    116    104    154
D25V13, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1              3              124
  CLUS_2              3              116
  CLUS_3              2              104
  CLUS_4              2              154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  PDGFRA MUTATED        0      5      1      1      1      2
  PDGFRA WILD-TYPE     99     72    119     56     62     90
D25V14, multiclass
        clus
vv       PDGFRA MUTATED PDGFRA WILD-TYPE
  CLUS_1              0               99
  CLUS_2              5               72
  CLUS_3              1              119
  CLUS_4              1               56
  CLUS_5              1               62
  CLUS_6              2               90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(26) Variable = STAG2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STAG2 MUTATED        4      3      1      2
  STAG2 WILD-TYPE     74     38     63     55
D26V1, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1             4              74
  CLUS_2             3              38
  CLUS_3             1              63
  CLUS_4             2              55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STAG2 MUTATED        2      1      3      4
  STAG2 WILD-TYPE     61     49     45     75
D26V2, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1             2              61
  CLUS_2             1              49
  CLUS_3             3              45
  CLUS_4             4              75
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STAG2 MUTATED        4      6      1      1
  STAG2 WILD-TYPE     66     92     43     62
D26V3, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1             4              66
  CLUS_2             6              92
  CLUS_3             1              43
  CLUS_4             1              62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STAG2 MUTATED        5      2      5
  STAG2 WILD-TYPE    133     59     71
D26V4, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1             5             133
  CLUS_2             2              59
  CLUS_3             5              71
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STAG2 MUTATED       14      2      0
  STAG2 WILD-TYPE    278    430     62
D26V5, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1            14             278
  CLUS_2             2             430
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STAG2 MUTATED        8      0      1      0
  STAG2 WILD-TYPE    145    223     87    161
D26V6, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1             8             145
  CLUS_2             0             223
  CLUS_3             1              87
  CLUS_4             0             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STAG2 MUTATED        1      3      4      2
  STAG2 WILD-TYPE    184    152    134     93
D26V7, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1             1             184
  CLUS_2             3             152
  CLUS_3             4             134
  CLUS_4             2              93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STAG2 MUTATED        7      1      2
  STAG2 WILD-TYPE    198    219    146
D26V8, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1             7             198
  CLUS_2             1             219
  CLUS_3             2             146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STAG2 MUTATED       10      1      0
  STAG2 WILD-TYPE    228    190    228
D26V9, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1            10             228
  CLUS_2             1             190
  CLUS_3             0             228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STAG2 MUTATED        9      1      1
  STAG2 WILD-TYPE    187    190    269
D26V10, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1             9             187
  CLUS_2             1             190
  CLUS_3             1             269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STAG2 MUTATED        1      2      0      1
  STAG2 WILD-TYPE    139    105     83    181
D26V11, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1             1             139
  CLUS_2             2             105
  CLUS_3             0              83
  CLUS_4             1             181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STAG2 MUTATED        0      1      3
  STAG2 WILD-TYPE    223    185    100
D26V12, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1             0             223
  CLUS_2             1             185
  CLUS_3             3             100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STAG2 MUTATED        1      1      0      2
  STAG2 WILD-TYPE    126    118    106    154
D26V13, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1             1             126
  CLUS_2             1             118
  CLUS_3             0             106
  CLUS_4             2             154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  STAG2 MUTATED        0      0      1      0      2      1
  STAG2 WILD-TYPE     99     77    119     57     61     91
D26V14, multiclass
        clus
vv       STAG2 MUTATED STAG2 WILD-TYPE
  CLUS_1             0              99
  CLUS_2             0              77
  CLUS_3             1             119
  CLUS_4             0              57
  CLUS_5             2              61
  CLUS_6             1              91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(27) Variable = MED9 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MED9 MUTATED        0      0      0      0
  MED9 WILD-TYPE     78     41     64     57
D27V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MED9 MUTATED        0      0      0      0
  MED9 WILD-TYPE     63     50     48     79
D27V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MED9 MUTATED        0      0      0      0
  MED9 WILD-TYPE     70     98     44     63
D27V3, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MED9 MUTATED        0      0      0
  MED9 WILD-TYPE    138     61     76
D27V4, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MED9 MUTATED        1      1      1
  MED9 WILD-TYPE    291    431     61
D27V5, multiclass
        clus
vv       MED9 MUTATED MED9 WILD-TYPE
  CLUS_1            1            291
  CLUS_2            1            431
  CLUS_3            1             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MED9 MUTATED        0      1      1      1
  MED9 WILD-TYPE    153    222     87    160
D27V6, multiclass
        clus
vv       MED9 MUTATED MED9 WILD-TYPE
  CLUS_1            0            153
  CLUS_2            1            222
  CLUS_3            1             87
  CLUS_4            1            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MED9 MUTATED        0      2      0      1
  MED9 WILD-TYPE    185    153    138     94
D27V7, multiclass
        clus
vv       MED9 MUTATED MED9 WILD-TYPE
  CLUS_1            0            185
  CLUS_2            2            153
  CLUS_3            0            138
  CLUS_4            1             94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MED9 MUTATED        0      1      2
  MED9 WILD-TYPE    205    219    146
D27V8, multiclass
        clus
vv       MED9 MUTATED MED9 WILD-TYPE
  CLUS_1            0            205
  CLUS_2            1            219
  CLUS_3            2            146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MED9 MUTATED        0      2      1
  MED9 WILD-TYPE    238    189    227
D27V9, multiclass
        clus
vv       MED9 MUTATED MED9 WILD-TYPE
  CLUS_1            0            238
  CLUS_2            2            189
  CLUS_3            1            227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MED9 MUTATED        1      1      1
  MED9 WILD-TYPE    195    190    269
D27V10, multiclass
        clus
vv       MED9 MUTATED MED9 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            1            190
  CLUS_3            1            269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MED9 MUTATED        1      0      0      2
  MED9 WILD-TYPE    139    107     83    180
D27V11, multiclass
        clus
vv       MED9 MUTATED MED9 WILD-TYPE
  CLUS_1            1            139
  CLUS_2            0            107
  CLUS_3            0             83
  CLUS_4            2            180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MED9 MUTATED        1      1      1
  MED9 WILD-TYPE    222    185    102
D27V12, multiclass
        clus
vv       MED9 MUTATED MED9 WILD-TYPE
  CLUS_1            1            222
  CLUS_2            1            185
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MED9 MUTATED        1      1      0      1
  MED9 WILD-TYPE    126    118    106    155
D27V13, multiclass
        clus
vv       MED9 MUTATED MED9 WILD-TYPE
  CLUS_1            1            126
  CLUS_2            1            118
  CLUS_3            0            106
  CLUS_4            1            155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  MED9 MUTATED        0      0      1      0      1      1
  MED9 WILD-TYPE     99     77    119     57     62     91
D27V14, multiclass
        clus
vv       MED9 MUTATED MED9 WILD-TYPE
  CLUS_1            0             99
  CLUS_2            0             77
  CLUS_3            1            119
  CLUS_4            0             57
  CLUS_5            1             62
  CLUS_6            1             91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(28) Variable = NKD2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKD2 MUTATED        0      0      0      0
  NKD2 WILD-TYPE     78     41     64     57
D28V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKD2 MUTATED        0      0      0      0
  NKD2 WILD-TYPE     63     50     48     79
D28V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKD2 MUTATED        0      0      0      0
  NKD2 WILD-TYPE     70     98     44     63
D28V3, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NKD2 MUTATED        0      0      0
  NKD2 WILD-TYPE    138     61     76
D28V4, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NKD2 MUTATED        1      3      0
  NKD2 WILD-TYPE    291    429     62
D28V5, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            1            291
  CLUS_2            3            429
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKD2 MUTATED        1      2      0      1
  NKD2 WILD-TYPE    152    221     88    160
D28V6, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            1            152
  CLUS_2            2            221
  CLUS_3            0             88
  CLUS_4            1            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKD2 MUTATED        0      0      1      0
  NKD2 WILD-TYPE    185    155    137     95
D28V7, multiclass
[1] "Remove cluster labels:" "NKD2 MUTATED"          
clus
  NKD2 MUTATED NKD2 WILD-TYPE 
             1            572 
    TCGA-02-0003     TCGA-02-2470     TCGA-02-2485     TCGA-06-0126 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-0128     TCGA-06-0129     TCGA-06-0130     TCGA-06-0154 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-0155     TCGA-06-0189     TCGA-06-0238     TCGA-06-0644 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-0650     TCGA-06-0875     TCGA-06-0876     TCGA-06-0877 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-0878     TCGA-06-0879     TCGA-06-0882     TCGA-06-0939 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-1804     TCGA-06-1806     TCGA-06-2557     TCGA-06-2558 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-2559     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2570     TCGA-06-5408 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5301 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0862     TCGA-14-0871     TCGA-14-1823 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-16-0846     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2625     TCGA-19-2631     TCGA-19-4068 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-19-5947     TCGA-19-5950     TCGA-19-5951     TCGA-19-5952 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-19-5953     TCGA-19-5954     TCGA-19-5955     TCGA-19-5958 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-19-5959     TCGA-19-5960     TCGA-26-1442     TCGA-26-5132 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-6173     TCGA-26-6174 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1836     TCGA-27-2518     TCGA-27-2528 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2501     TCGA-28-5208 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-28-5214     TCGA-32-1970     TCGA-32-1982     TCGA-32-1986 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-32-1991     TCGA-32-4210     TCGA-32-4211     TCGA-32-5222 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-41-6646 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-74-6573     TCGA-74-6575     TCGA-74-6577     TCGA-74-6578 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-74-6584     TCGA-76-4926     TCGA-76-4927     TCGA-76-4928 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-76-4929     TCGA-76-4931     TCGA-76-4932     TCGA-76-6192 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-76-6193     TCGA-76-6282     TCGA-76-6283     TCGA-76-6285 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-CS-4938     TCGA-CS-4942     TCGA-CS-4943     TCGA-CS-4944 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394     TCGA-CS-5396 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-CS-5397     TCGA-CS-6186     TCGA-CS-6188     TCGA-CS-6665 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-CS-6666     TCGA-CS-6669     TCGA-CS-6670     TCGA-DB-5270 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275     TCGA-DB-5276 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279     TCGA-DB-5280 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75M     TCGA-DB-A75O 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A66B     TCGA-DH-A66D 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7US     TCGA-DU-5847 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7011     TCGA-DU-7012     TCGA-DU-7013 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-7014     TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7TA     TCGA-DU-A7TB 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YQ 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z6     TCGA-EZ-7264 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-7634     TCGA-FG-7636 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60L     TCGA-FG-A6IZ 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-HT-7467 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8564     TCGA-HT-A4DV 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RB 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74J     TCGA-HT-A74L     TCGA-HT-A74O 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-KT-A74X     TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-P5-A5F6     TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-P5-A735     TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65S 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X4     TCGA-QH-A6X5 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-RY-A83X     TCGA-RY-A83Y 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-RY-A83Z     TCGA-RY-A843     TCGA-RY-A845     TCGA-S9-A6TS 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TX     TCGA-S9-A6TY 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U5     TCGA-S9-A6U6 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-S9-A6U9     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WN     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IY     TCGA-S9-A7IZ 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2     TCGA-S9-A7QX 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R4     TCGA-S9-A7R8 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TQ-A7RF 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RK     TCGA-TQ-A7RN 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-TQ-A7RQ     TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RV 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-W9-A837     TCGA-WY-A85B     TCGA-WY-A85C     TCGA-WY-A85D 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NKD2 MUTATED        0      1      0
  NKD2 WILD-TYPE    205    219    148
D28V8, multiclass
[1] "Remove cluster labels:" "NKD2 MUTATED"          
clus
  NKD2 MUTATED NKD2 WILD-TYPE 
             1            572 
    TCGA-02-0003     TCGA-02-2470     TCGA-02-2485     TCGA-06-0126 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-0128     TCGA-06-0129     TCGA-06-0130     TCGA-06-0154 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-0155     TCGA-06-0189     TCGA-06-0238     TCGA-06-0644 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-0650     TCGA-06-0875     TCGA-06-0876     TCGA-06-0877 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-0878     TCGA-06-0879     TCGA-06-0882     TCGA-06-0939 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-1804     TCGA-06-1806     TCGA-06-2557     TCGA-06-2558 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-2559     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2570     TCGA-06-5408 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5301 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0862     TCGA-14-0871     TCGA-14-1823 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-16-0846     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2625     TCGA-19-2631     TCGA-19-4068 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-19-5947     TCGA-19-5950     TCGA-19-5951     TCGA-19-5952 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-19-5953     TCGA-19-5954     TCGA-19-5955     TCGA-19-5958 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-19-5959     TCGA-19-5960     TCGA-26-1442     TCGA-26-5132 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-6173     TCGA-26-6174 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1836     TCGA-27-2518     TCGA-27-2528 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2501     TCGA-28-5208 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-28-5214     TCGA-32-1970     TCGA-32-1982     TCGA-32-1986 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-32-1991     TCGA-32-4210     TCGA-32-4211     TCGA-32-5222 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-41-6646 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-74-6573     TCGA-74-6575     TCGA-74-6577     TCGA-74-6578 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-74-6584     TCGA-76-4926     TCGA-76-4927     TCGA-76-4928 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-76-4929     TCGA-76-4931     TCGA-76-4932     TCGA-76-6192 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-76-6193     TCGA-76-6282     TCGA-76-6283     TCGA-76-6285 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-CS-4938     TCGA-CS-4942     TCGA-CS-4943     TCGA-CS-4944 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394     TCGA-CS-5396 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-CS-5397     TCGA-CS-6186     TCGA-CS-6188     TCGA-CS-6665 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-CS-6666     TCGA-CS-6669     TCGA-CS-6670     TCGA-DB-5270 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275     TCGA-DB-5276 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279     TCGA-DB-5280 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75M     TCGA-DB-A75O 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A66B     TCGA-DH-A66D 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7US     TCGA-DU-5847 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7011     TCGA-DU-7012     TCGA-DU-7013 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-7014     TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7TA     TCGA-DU-A7TB 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YQ 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z6     TCGA-EZ-7264 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-7634     TCGA-FG-7636 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60L     TCGA-FG-A6IZ 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-HT-7467 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8564     TCGA-HT-A4DV 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RB 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74J     TCGA-HT-A74L     TCGA-HT-A74O 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-KT-A74X     TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-P5-A5F6     TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-P5-A735     TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65S 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X4     TCGA-QH-A6X5 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-RY-A83X     TCGA-RY-A83Y 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-RY-A83Z     TCGA-RY-A843     TCGA-RY-A845     TCGA-S9-A6TS 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TX     TCGA-S9-A6TY 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U5     TCGA-S9-A6U6 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-S9-A6U9     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WN     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IY     TCGA-S9-A7IZ 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2     TCGA-S9-A7QX 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R4     TCGA-S9-A7R8 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TQ-A7RF 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RK     TCGA-TQ-A7RN 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-TQ-A7RQ     TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RV 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
    TCGA-W9-A837     TCGA-WY-A85B     TCGA-WY-A85C     TCGA-WY-A85D 
"NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" "NKD2 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NKD2 MUTATED        1      0      3
  NKD2 WILD-TYPE    237    191    225
D28V9, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            1            237
  CLUS_2            0            191
  CLUS_3            3            225
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NKD2 MUTATED        1      1      2
  NKD2 WILD-TYPE    195    190    268
D28V10, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            1            190
  CLUS_3            2            268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKD2 MUTATED        0      2      1      1
  NKD2 WILD-TYPE    140    105     82    181
D28V11, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            0            140
  CLUS_2            2            105
  CLUS_3            1             82
  CLUS_4            1            181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NKD2 MUTATED        2      1      1
  NKD2 WILD-TYPE    221    185    102
D28V12, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            2            221
  CLUS_2            1            185
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKD2 MUTATED        1      1      1      1
  NKD2 WILD-TYPE    126    118    105    155
D28V13, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            1            126
  CLUS_2            1            118
  CLUS_3            1            105
  CLUS_4            1            155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  NKD2 MUTATED        1      0      1      1      1      0
  NKD2 WILD-TYPE     98     77    119     56     62     92
D28V14, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            1             98
  CLUS_2            0             77
  CLUS_3            1            119
  CLUS_4            1             56
  CLUS_5            1             62
  CLUS_6            0             92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(29) Variable = IRS4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IRS4 MUTATED        1      1      0      1
  IRS4 WILD-TYPE     77     40     64     56
D29V1, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            1             77
  CLUS_2            1             40
  CLUS_3            0             64
  CLUS_4            1             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IRS4 MUTATED        1      1      0      1
  IRS4 WILD-TYPE     62     49     48     78
D29V2, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            1             62
  CLUS_2            1             49
  CLUS_3            0             48
  CLUS_4            1             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IRS4 MUTATED        2      0      0      1
  IRS4 WILD-TYPE     68     98     44     62
D29V3, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            2             68
  CLUS_2            0             98
  CLUS_3            0             44
  CLUS_4            1             62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRS4 MUTATED        0      1      2
  IRS4 WILD-TYPE    138     60     74
D29V4, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            0            138
  CLUS_2            1             60
  CLUS_3            2             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRS4 MUTATED        4      6      1
  IRS4 WILD-TYPE    288    426     61
D29V5, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            4            288
  CLUS_2            6            426
  CLUS_3            1             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IRS4 MUTATED        3      4      1      1
  IRS4 WILD-TYPE    150    219     87    160
D29V6, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            3            150
  CLUS_2            4            219
  CLUS_3            1             87
  CLUS_4            1            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IRS4 MUTATED        4      2      2      0
  IRS4 WILD-TYPE    181    153    136     95
D29V7, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            4            181
  CLUS_2            2            153
  CLUS_3            2            136
  CLUS_4            0             95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRS4 MUTATED        2      5      1
  IRS4 WILD-TYPE    203    215    147
D29V8, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            2            203
  CLUS_2            5            215
  CLUS_3            1            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRS4 MUTATED        6      2      3
  IRS4 WILD-TYPE    232    189    225
D29V9, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            6            232
  CLUS_2            2            189
  CLUS_3            3            225
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRS4 MUTATED        3      6      2
  IRS4 WILD-TYPE    193    185    268
D29V10, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            3            193
  CLUS_2            6            185
  CLUS_3            2            268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IRS4 MUTATED        1      4      0      3
  IRS4 WILD-TYPE    139    103     83    179
D29V11, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            1            139
  CLUS_2            4            103
  CLUS_3            0             83
  CLUS_4            3            179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRS4 MUTATED        2      3      3
  IRS4 WILD-TYPE    221    183    100
D29V12, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            2            221
  CLUS_2            3            183
  CLUS_3            3            100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IRS4 MUTATED        0      3      1      4
  IRS4 WILD-TYPE    127    116    105    152
D29V13, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            0            127
  CLUS_2            3            116
  CLUS_3            1            105
  CLUS_4            4            152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  IRS4 MUTATED        1      3      1      0      1      2
  IRS4 WILD-TYPE     98     74    119     57     62     90
D29V14, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            1             98
  CLUS_2            3             74
  CLUS_3            1            119
  CLUS_4            0             57
  CLUS_5            1             62
  CLUS_6            2             90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(30) Variable = REN MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  REN MUTATED        0      0      2      1
  REN WILD-TYPE     78     41     62     56
D30V1, multiclass
        clus
vv       REN MUTATED REN WILD-TYPE
  CLUS_1           0            78
  CLUS_2           0            41
  CLUS_3           2            62
  CLUS_4           1            56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  REN MUTATED        0      0      1      2
  REN WILD-TYPE     63     50     47     77
D30V2, multiclass
        clus
vv       REN MUTATED REN WILD-TYPE
  CLUS_1           0            63
  CLUS_2           0            50
  CLUS_3           1            47
  CLUS_4           2            77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  REN MUTATED        1      1      3      0
  REN WILD-TYPE     69     97     41     63
D30V3, multiclass
        clus
vv       REN MUTATED REN WILD-TYPE
  CLUS_1           1            69
  CLUS_2           1            97
  CLUS_3           3            41
  CLUS_4           0            63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  REN MUTATED        4      0      1
  REN WILD-TYPE    134     61     75
D30V4, multiclass
        clus
vv       REN MUTATED REN WILD-TYPE
  CLUS_1           4           134
  CLUS_2           0            61
  CLUS_3           1            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  REN MUTATED        7      0      0
  REN WILD-TYPE    285    432     62
D30V5, multiclass
        clus
vv       REN MUTATED REN WILD-TYPE
  CLUS_1           7           285
  CLUS_2           0           432
  CLUS_3           0            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  REN MUTATED        5      0      0      0
  REN WILD-TYPE    148    223     88    161
D30V6, multiclass
        clus
vv       REN MUTATED REN WILD-TYPE
  CLUS_1           5           148
  CLUS_2           0           223
  CLUS_3           0            88
  CLUS_4           0           161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  REN MUTATED        1      2      2      1
  REN WILD-TYPE    184    153    136     94
D30V7, multiclass
        clus
vv       REN MUTATED REN WILD-TYPE
  CLUS_1           1           184
  CLUS_2           2           153
  CLUS_3           2           136
  CLUS_4           1            94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  REN MUTATED        2      3      1
  REN WILD-TYPE    203    217    147
D30V8, multiclass
        clus
vv       REN MUTATED REN WILD-TYPE
  CLUS_1           2           203
  CLUS_2           3           217
  CLUS_3           1           147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  REN MUTATED        1      2      0
  REN WILD-TYPE    237    189    228
D30V9, multiclass
        clus
vv       REN MUTATED REN WILD-TYPE
  CLUS_1           1           237
  CLUS_2           2           189
  CLUS_3           0           228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  REN MUTATED        1      0      2
  REN WILD-TYPE    195    191    268
D30V10, multiclass
        clus
vv       REN MUTATED REN WILD-TYPE
  CLUS_1           1           195
  CLUS_2           0           191
  CLUS_3           2           268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  REN MUTATED        0      1      0      1
  REN WILD-TYPE    140    106     83    181
D30V11, multiclass
[1] "Remove cluster labels:" "REN MUTATED"           
clus
  REN MUTATED REN WILD-TYPE 
            2           510 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5280    TCGA-DB-5281 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A4X9    TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A4XE    TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A64O    TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A64U    TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A75L    TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-5142    TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-A66D    TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-A7UT    TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-5851    TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-5870    TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6393    TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6399    TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6404    TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6410    TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7009    TCGA-DU-7010    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7014 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7015    TCGA-DU-7018    TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7294 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7298    TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7304    TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-8162    TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8166 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-8167    TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A5TT    TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A6S3    TCGA-DU-A6S6    TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A76L    TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A7TA    TCGA-DU-A7TB    TCGA-DU-A7TC    TCGA-DU-A7TG    TCGA-DU-A7TI 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A7TJ    TCGA-E1-5302    TCGA-E1-5303    TCGA-E1-5304    TCGA-E1-5305 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-5307    TCGA-E1-5311    TCGA-E1-5318    TCGA-E1-5319    TCGA-E1-5322 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YD    TCGA-E1-A7YE    TCGA-E1-A7YH    TCGA-E1-A7YI    TCGA-E1-A7YJ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YK    TCGA-E1-A7YL    TCGA-E1-A7YM    TCGA-E1-A7YN    TCGA-E1-A7YO 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YQ    TCGA-E1-A7YS    TCGA-E1-A7YU    TCGA-E1-A7YV    TCGA-E1-A7YW 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YY    TCGA-E1-A7Z2    TCGA-E1-A7Z3    TCGA-E1-A7Z4    TCGA-E1-A7Z6 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-EZ-7264    TCGA-F6-A8O3    TCGA-F6-A8O4    TCGA-FG-5962    TCGA-FG-5963 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-5964    TCGA-FG-5965    TCGA-FG-6688    TCGA-FG-6689    TCGA-FG-6690 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-6691    TCGA-FG-6692    TCGA-FG-7634    TCGA-FG-7636    TCGA-FG-7637 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-7638    TCGA-FG-7641    TCGA-FG-7643    TCGA-FG-8181    TCGA-FG-8182 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-8185    TCGA-FG-8186    TCGA-FG-8187    TCGA-FG-8188    TCGA-FG-8189 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-8191    TCGA-FG-A4MT    TCGA-FG-A4MU    TCGA-FG-A4MW    TCGA-FG-A4MX 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A4MY    TCGA-FG-A60J    TCGA-FG-A60K    TCGA-FG-A60L    TCGA-FG-A6IZ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A6J1    TCGA-FG-A6J3    TCGA-FG-A70Y    TCGA-FG-A70Z    TCGA-FG-A710 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A711    TCGA-FG-A713    TCGA-FG-A87N    TCGA-FG-A87Q    TCGA-FN-7833 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7467    TCGA-HT-7468    TCGA-HT-7469    TCGA-HT-7470    TCGA-HT-7471 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7472    TCGA-HT-7473    TCGA-HT-7474    TCGA-HT-7475    TCGA-HT-7476 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7477    TCGA-HT-7478    TCGA-HT-7479    TCGA-HT-7480    TCGA-HT-7481 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7482    TCGA-HT-7483    TCGA-HT-7485    TCGA-HT-7601    TCGA-HT-7602 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7603    TCGA-HT-7604    TCGA-HT-7605    TCGA-HT-7606    TCGA-HT-7607 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7608    TCGA-HT-7609    TCGA-HT-7610    TCGA-HT-7611    TCGA-HT-7616 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7620    TCGA-HT-7676    TCGA-HT-7677    TCGA-HT-7680    TCGA-HT-7681 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7684    TCGA-HT-7686    TCGA-HT-7687    TCGA-HT-7688    TCGA-HT-7689 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7690    TCGA-HT-7691    TCGA-HT-7692    TCGA-HT-7693    TCGA-HT-7694 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7695    TCGA-HT-7854    TCGA-HT-7855    TCGA-HT-7856    TCGA-HT-7857 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7858    TCGA-HT-7860    TCGA-HT-7873    TCGA-HT-7874    TCGA-HT-7875 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7877    TCGA-HT-7879    TCGA-HT-7880    TCGA-HT-7881    TCGA-HT-7882 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7884    TCGA-HT-7902    TCGA-HT-8010    TCGA-HT-8011    TCGA-HT-8012 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8013    TCGA-HT-8015    TCGA-HT-8018    TCGA-HT-8019    TCGA-HT-8104 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8105    TCGA-HT-8106    TCGA-HT-8107    TCGA-HT-8108    TCGA-HT-8109 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8110    TCGA-HT-8111    TCGA-HT-8113    TCGA-HT-8114    TCGA-HT-8558 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8563    TCGA-HT-8564    TCGA-HT-A4DS    TCGA-HT-A4DV    TCGA-HT-A5R5 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A5R7    TCGA-HT-A5R9    TCGA-HT-A5RA    TCGA-HT-A5RB    TCGA-HT-A5RC 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A614    TCGA-HT-A615    TCGA-HT-A616    TCGA-HT-A617    TCGA-HT-A618 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A619    TCGA-HT-A61A    TCGA-HT-A61B    TCGA-HT-A61C    TCGA-HT-A74H 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A74K    TCGA-HT-A74L    TCGA-HT-A74O    TCGA-HW-7486    TCGA-HW-7487 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HW-7489    TCGA-HW-7490    TCGA-HW-7491    TCGA-HW-7493    TCGA-HW-7495 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HW-8319    TCGA-HW-8320    TCGA-HW-8321    TCGA-HW-8322    TCGA-HW-A5KJ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HW-A5KK    TCGA-HW-A5KL    TCGA-HW-A5KM    TCGA-IK-7675    TCGA-IK-8125 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-KT-A74X    TCGA-KT-A7W1    TCGA-P5-A5ET    TCGA-P5-A5EU    TCGA-P5-A5EV 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A5EW    TCGA-P5-A5EX    TCGA-P5-A5EY    TCGA-P5-A5EZ    TCGA-P5-A5F0 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A5F1    TCGA-P5-A5F2    TCGA-P5-A5F4    TCGA-P5-A5F6    TCGA-P5-A72U 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A72W    TCGA-P5-A72X    TCGA-P5-A72Z    TCGA-P5-A730    TCGA-P5-A731 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A733    TCGA-P5-A735    TCGA-P5-A736    TCGA-P5-A737    TCGA-P5-A77W 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A77X    TCGA-P5-A780    TCGA-P5-A781    TCGA-QH-A65R    TCGA-QH-A65S 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A65V    TCGA-QH-A65X    TCGA-QH-A65Z    TCGA-QH-A6CS    TCGA-QH-A6CU 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A6CV    TCGA-QH-A6CX    TCGA-QH-A6CY    TCGA-QH-A6CZ    TCGA-QH-A6X3 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A6X4    TCGA-QH-A6X5    TCGA-QH-A6X8    TCGA-QH-A6X9    TCGA-QH-A6XA 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A6XC    TCGA-QH-A86X    TCGA-QH-A870    TCGA-R8-A6MK    TCGA-R8-A6ML 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-R8-A6MO    TCGA-R8-A6YH    TCGA-R8-A73M    TCGA-RY-A83X    TCGA-RY-A83Y 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-RY-A83Z    TCGA-RY-A840    TCGA-RY-A843    TCGA-RY-A845    TCGA-RY-A847 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6TS    TCGA-S9-A6TU    TCGA-S9-A6TV    TCGA-S9-A6TW    TCGA-S9-A6TX 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6TY    TCGA-S9-A6TZ    TCGA-S9-A6U0    TCGA-S9-A6U1    TCGA-S9-A6U2 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6U5    TCGA-S9-A6U6    TCGA-S9-A6U8    TCGA-S9-A6U9    TCGA-S9-A6UA 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6UB    TCGA-S9-A6WD    TCGA-S9-A6WE    TCGA-S9-A6WG    TCGA-S9-A6WH 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6WI    TCGA-S9-A6WL    TCGA-S9-A6WM    TCGA-S9-A6WN    TCGA-S9-A6WO 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6WP    TCGA-S9-A6WQ    TCGA-S9-A7IQ    TCGA-S9-A7IS    TCGA-S9-A7IX 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7IY    TCGA-S9-A7IZ    TCGA-S9-A7J0    TCGA-S9-A7J1    TCGA-S9-A7J2 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7J3    TCGA-S9-A7QW    TCGA-S9-A7QX    TCGA-S9-A7QY    TCGA-S9-A7QZ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7R1    TCGA-S9-A7R2    TCGA-S9-A7R3    TCGA-S9-A7R4    TCGA-S9-A7R7 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7R8    TCGA-S9-A89V    TCGA-S9-A89Z    TCGA-TM-A7C3    TCGA-TM-A7C4 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A7C5    TCGA-TM-A7CA    TCGA-TM-A7CF    TCGA-TM-A84B    TCGA-TM-A84C 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A84F    TCGA-TM-A84G    TCGA-TM-A84H    TCGA-TM-A84I    TCGA-TM-A84J 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A84L    TCGA-TM-A84M    TCGA-TM-A84O    TCGA-TM-A84Q    TCGA-TM-A84R 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A84S    TCGA-TM-A84T    TCGA-TQ-A7RF    TCGA-TQ-A7RG    TCGA-TQ-A7RH 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RI    TCGA-TQ-A7RJ    TCGA-TQ-A7RK    TCGA-TQ-A7RM    TCGA-TQ-A7RN 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RO    TCGA-TQ-A7RP    TCGA-TQ-A7RQ    TCGA-TQ-A7RR    TCGA-TQ-A7RS 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RU    TCGA-TQ-A7RV    TCGA-TQ-A7RW    TCGA-TQ-A8XE    TCGA-VM-A8C8 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-VM-A8C9    TCGA-VM-A8CA    TCGA-VM-A8CB    TCGA-VM-A8CD    TCGA-VM-A8CE 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-VM-A8CF    TCGA-VM-A8CH    TCGA-VV-A829    TCGA-VV-A86M    TCGA-VW-A7QS 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-VW-A8FI    TCGA-W9-A837    TCGA-WH-A86K    TCGA-WY-A858    TCGA-WY-A859 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-WY-A85A    TCGA-WY-A85B    TCGA-WY-A85C    TCGA-WY-A85D    TCGA-WY-A85E 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  REN MUTATED        0      1      1
  REN WILD-TYPE    223    185    102
D30V12, multiclass
[1] "Remove cluster labels:" "REN MUTATED"           
clus
  REN MUTATED REN WILD-TYPE 
            2           510 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5280    TCGA-DB-5281 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A4X9    TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A4XE    TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A64O    TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A64U    TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A75L    TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-5142    TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-A66D    TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-A7UT    TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-5851    TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-5870    TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6393    TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6399    TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6404    TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6410    TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7009    TCGA-DU-7010    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7014 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7015    TCGA-DU-7018    TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7294 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7298    TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7304    TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-8162    TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8166 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-8167    TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A5TT    TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A6S3    TCGA-DU-A6S6    TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A76L    TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A7TA    TCGA-DU-A7TB    TCGA-DU-A7TC    TCGA-DU-A7TG    TCGA-DU-A7TI 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A7TJ    TCGA-E1-5302    TCGA-E1-5303    TCGA-E1-5304    TCGA-E1-5305 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-5307    TCGA-E1-5311    TCGA-E1-5318    TCGA-E1-5319    TCGA-E1-5322 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YD    TCGA-E1-A7YE    TCGA-E1-A7YH    TCGA-E1-A7YI    TCGA-E1-A7YJ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YK    TCGA-E1-A7YL    TCGA-E1-A7YM    TCGA-E1-A7YN    TCGA-E1-A7YO 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YQ    TCGA-E1-A7YS    TCGA-E1-A7YU    TCGA-E1-A7YV    TCGA-E1-A7YW 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YY    TCGA-E1-A7Z2    TCGA-E1-A7Z3    TCGA-E1-A7Z4    TCGA-E1-A7Z6 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-EZ-7264    TCGA-F6-A8O3    TCGA-F6-A8O4    TCGA-FG-5962    TCGA-FG-5963 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-5964    TCGA-FG-5965    TCGA-FG-6688    TCGA-FG-6689    TCGA-FG-6690 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-6691    TCGA-FG-6692    TCGA-FG-7634    TCGA-FG-7636    TCGA-FG-7637 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-7638    TCGA-FG-7641    TCGA-FG-7643    TCGA-FG-8181    TCGA-FG-8182 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-8185    TCGA-FG-8186    TCGA-FG-8187    TCGA-FG-8188    TCGA-FG-8189 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-8191    TCGA-FG-A4MT    TCGA-FG-A4MU    TCGA-FG-A4MW    TCGA-FG-A4MX 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A4MY    TCGA-FG-A60J    TCGA-FG-A60K    TCGA-FG-A60L    TCGA-FG-A6IZ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A6J1    TCGA-FG-A6J3    TCGA-FG-A70Y    TCGA-FG-A70Z    TCGA-FG-A710 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A711    TCGA-FG-A713    TCGA-FG-A87N    TCGA-FG-A87Q    TCGA-FN-7833 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7467    TCGA-HT-7468    TCGA-HT-7469    TCGA-HT-7470    TCGA-HT-7471 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7472    TCGA-HT-7473    TCGA-HT-7474    TCGA-HT-7475    TCGA-HT-7476 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7477    TCGA-HT-7478    TCGA-HT-7479    TCGA-HT-7480    TCGA-HT-7481 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7482    TCGA-HT-7483    TCGA-HT-7485    TCGA-HT-7601    TCGA-HT-7602 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7603    TCGA-HT-7604    TCGA-HT-7605    TCGA-HT-7606    TCGA-HT-7607 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7608    TCGA-HT-7609    TCGA-HT-7610    TCGA-HT-7611    TCGA-HT-7616 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7620    TCGA-HT-7676    TCGA-HT-7677    TCGA-HT-7680    TCGA-HT-7681 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7684    TCGA-HT-7686    TCGA-HT-7687    TCGA-HT-7688    TCGA-HT-7689 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7690    TCGA-HT-7691    TCGA-HT-7692    TCGA-HT-7693    TCGA-HT-7694 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7695    TCGA-HT-7854    TCGA-HT-7855    TCGA-HT-7856    TCGA-HT-7857 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7858    TCGA-HT-7860    TCGA-HT-7873    TCGA-HT-7874    TCGA-HT-7875 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7877    TCGA-HT-7879    TCGA-HT-7880    TCGA-HT-7881    TCGA-HT-7882 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7884    TCGA-HT-7902    TCGA-HT-8010    TCGA-HT-8011    TCGA-HT-8012 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8013    TCGA-HT-8015    TCGA-HT-8018    TCGA-HT-8019    TCGA-HT-8104 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8105    TCGA-HT-8106    TCGA-HT-8107    TCGA-HT-8108    TCGA-HT-8109 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8110    TCGA-HT-8111    TCGA-HT-8113    TCGA-HT-8114    TCGA-HT-8558 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8563    TCGA-HT-8564    TCGA-HT-A4DS    TCGA-HT-A4DV    TCGA-HT-A5R5 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A5R7    TCGA-HT-A5R9    TCGA-HT-A5RA    TCGA-HT-A5RB    TCGA-HT-A5RC 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A614    TCGA-HT-A615    TCGA-HT-A616    TCGA-HT-A617    TCGA-HT-A618 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A619    TCGA-HT-A61A    TCGA-HT-A61B    TCGA-HT-A61C    TCGA-HT-A74H 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A74K    TCGA-HT-A74L    TCGA-HT-A74O    TCGA-HW-7486    TCGA-HW-7487 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HW-7489    TCGA-HW-7490    TCGA-HW-7491    TCGA-HW-7493    TCGA-HW-7495 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HW-8319    TCGA-HW-8320    TCGA-HW-8321    TCGA-HW-8322    TCGA-HW-A5KJ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HW-A5KK    TCGA-HW-A5KL    TCGA-HW-A5KM    TCGA-IK-7675    TCGA-IK-8125 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-KT-A74X    TCGA-KT-A7W1    TCGA-P5-A5ET    TCGA-P5-A5EU    TCGA-P5-A5EV 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A5EW    TCGA-P5-A5EX    TCGA-P5-A5EY    TCGA-P5-A5EZ    TCGA-P5-A5F0 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A5F1    TCGA-P5-A5F2    TCGA-P5-A5F4    TCGA-P5-A5F6    TCGA-P5-A72U 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A72W    TCGA-P5-A72X    TCGA-P5-A72Z    TCGA-P5-A730    TCGA-P5-A731 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A733    TCGA-P5-A735    TCGA-P5-A736    TCGA-P5-A737    TCGA-P5-A77W 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A77X    TCGA-P5-A780    TCGA-P5-A781    TCGA-QH-A65R    TCGA-QH-A65S 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A65V    TCGA-QH-A65X    TCGA-QH-A65Z    TCGA-QH-A6CS    TCGA-QH-A6CU 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A6CV    TCGA-QH-A6CX    TCGA-QH-A6CY    TCGA-QH-A6CZ    TCGA-QH-A6X3 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A6X4    TCGA-QH-A6X5    TCGA-QH-A6X8    TCGA-QH-A6X9    TCGA-QH-A6XA 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A6XC    TCGA-QH-A86X    TCGA-QH-A870    TCGA-R8-A6MK    TCGA-R8-A6ML 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-R8-A6MO    TCGA-R8-A6YH    TCGA-R8-A73M    TCGA-RY-A83X    TCGA-RY-A83Y 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-RY-A83Z    TCGA-RY-A840    TCGA-RY-A843    TCGA-RY-A845    TCGA-RY-A847 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6TS    TCGA-S9-A6TU    TCGA-S9-A6TV    TCGA-S9-A6TW    TCGA-S9-A6TX 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6TY    TCGA-S9-A6TZ    TCGA-S9-A6U0    TCGA-S9-A6U1    TCGA-S9-A6U2 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6U5    TCGA-S9-A6U6    TCGA-S9-A6U8    TCGA-S9-A6U9    TCGA-S9-A6UA 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6UB    TCGA-S9-A6WD    TCGA-S9-A6WE    TCGA-S9-A6WG    TCGA-S9-A6WH 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6WI    TCGA-S9-A6WL    TCGA-S9-A6WM    TCGA-S9-A6WN    TCGA-S9-A6WO 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6WP    TCGA-S9-A6WQ    TCGA-S9-A7IQ    TCGA-S9-A7IS    TCGA-S9-A7IX 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7IY    TCGA-S9-A7IZ    TCGA-S9-A7J0    TCGA-S9-A7J1    TCGA-S9-A7J2 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7J3    TCGA-S9-A7QW    TCGA-S9-A7QX    TCGA-S9-A7QY    TCGA-S9-A7QZ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7R1    TCGA-S9-A7R2    TCGA-S9-A7R3    TCGA-S9-A7R4    TCGA-S9-A7R7 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7R8    TCGA-S9-A89V    TCGA-S9-A89Z    TCGA-TM-A7C3    TCGA-TM-A7C4 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A7C5    TCGA-TM-A7CA    TCGA-TM-A7CF    TCGA-TM-A84B    TCGA-TM-A84C 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A84F    TCGA-TM-A84G    TCGA-TM-A84H    TCGA-TM-A84I    TCGA-TM-A84J 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A84L    TCGA-TM-A84M    TCGA-TM-A84O    TCGA-TM-A84Q    TCGA-TM-A84R 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A84S    TCGA-TM-A84T    TCGA-TQ-A7RF    TCGA-TQ-A7RG    TCGA-TQ-A7RH 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RI    TCGA-TQ-A7RJ    TCGA-TQ-A7RK    TCGA-TQ-A7RM    TCGA-TQ-A7RN 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RO    TCGA-TQ-A7RP    TCGA-TQ-A7RQ    TCGA-TQ-A7RR    TCGA-TQ-A7RS 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RU    TCGA-TQ-A7RV    TCGA-TQ-A7RW    TCGA-TQ-A8XE    TCGA-VM-A8C8 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-VM-A8C9    TCGA-VM-A8CA    TCGA-VM-A8CB    TCGA-VM-A8CD    TCGA-VM-A8CE 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-VM-A8CF    TCGA-VM-A8CH    TCGA-VV-A829    TCGA-VV-A86M    TCGA-VW-A7QS 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-VW-A8FI    TCGA-W9-A837    TCGA-WH-A86K    TCGA-WY-A858    TCGA-WY-A859 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-WY-A85A    TCGA-WY-A85B    TCGA-WY-A85C    TCGA-WY-A85D    TCGA-WY-A85E 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  REN MUTATED        0      1      0      1
  REN WILD-TYPE    127    118    106    155
D30V13, multiclass
[1] "Remove cluster labels:" "REN MUTATED"           
clus
  REN MUTATED REN WILD-TYPE 
            2           506 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5281    TCGA-DB-A4X9 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD    TCGA-DB-A4XE 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L    TCGA-DB-A64O 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S    TCGA-DB-A64U 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K    TCGA-DB-A75L 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141    TCGA-DH-5142 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B    TCGA-DH-A66D 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US    TCGA-DH-A7UT 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849    TCGA-DU-5851 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855    TCGA-DU-5870 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392    TCGA-DU-6393 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397    TCGA-DU-6399 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403    TCGA-DU-6404 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408    TCGA-DU-6410 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008    TCGA-DU-7009 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7010    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7014    TCGA-DU-7015 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7018    TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7294    TCGA-DU-7298 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302    TCGA-DU-7304 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161    TCGA-DU-8162 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8166    TCGA-DU-8167 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS    TCGA-DU-A5TT 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2    TCGA-DU-A6S3 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A6S6    TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K    TCGA-DU-A76L 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8    TCGA-DU-A7TA 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A7TB    TCGA-DU-A7TC    TCGA-DU-A7TG    TCGA-DU-A7TI    TCGA-DU-A7TJ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-5302    TCGA-E1-5303    TCGA-E1-5304    TCGA-E1-5305    TCGA-E1-5307 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-5311    TCGA-E1-5318    TCGA-E1-5319    TCGA-E1-5322    TCGA-E1-A7YD 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YE    TCGA-E1-A7YH    TCGA-E1-A7YI    TCGA-E1-A7YJ    TCGA-E1-A7YK 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YL    TCGA-E1-A7YM    TCGA-E1-A7YN    TCGA-E1-A7YO    TCGA-E1-A7YQ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YS    TCGA-E1-A7YU    TCGA-E1-A7YV    TCGA-E1-A7YW    TCGA-E1-A7YY 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7Z2    TCGA-E1-A7Z3    TCGA-E1-A7Z4    TCGA-E1-A7Z6    TCGA-EZ-7264 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-F6-A8O3    TCGA-F6-A8O4    TCGA-FG-5962    TCGA-FG-5963    TCGA-FG-5964 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-5965    TCGA-FG-6688    TCGA-FG-6689    TCGA-FG-6690    TCGA-FG-6691 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-6692    TCGA-FG-7634    TCGA-FG-7636    TCGA-FG-7637    TCGA-FG-7638 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-7641    TCGA-FG-7643    TCGA-FG-8181    TCGA-FG-8182    TCGA-FG-8185 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-8186    TCGA-FG-8187    TCGA-FG-8188    TCGA-FG-8189    TCGA-FG-8191 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A4MT    TCGA-FG-A4MU    TCGA-FG-A4MW    TCGA-FG-A4MX    TCGA-FG-A4MY 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A60J    TCGA-FG-A60K    TCGA-FG-A60L    TCGA-FG-A6IZ    TCGA-FG-A6J1 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A6J3    TCGA-FG-A70Y    TCGA-FG-A70Z    TCGA-FG-A710    TCGA-FG-A711 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A713    TCGA-FG-A87N    TCGA-FG-A87Q    TCGA-FN-7833    TCGA-HT-7467 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7468    TCGA-HT-7469    TCGA-HT-7470    TCGA-HT-7471    TCGA-HT-7472 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7473    TCGA-HT-7474    TCGA-HT-7475    TCGA-HT-7476    TCGA-HT-7477 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7478    TCGA-HT-7479    TCGA-HT-7480    TCGA-HT-7481    TCGA-HT-7482 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7483    TCGA-HT-7485    TCGA-HT-7601    TCGA-HT-7602    TCGA-HT-7603 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7604    TCGA-HT-7605    TCGA-HT-7606    TCGA-HT-7607    TCGA-HT-7608 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7609    TCGA-HT-7610    TCGA-HT-7611    TCGA-HT-7616    TCGA-HT-7620 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7676    TCGA-HT-7677    TCGA-HT-7680    TCGA-HT-7681    TCGA-HT-7684 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7686    TCGA-HT-7687    TCGA-HT-7688    TCGA-HT-7689    TCGA-HT-7690 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7691    TCGA-HT-7692    TCGA-HT-7693    TCGA-HT-7694    TCGA-HT-7695 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7854    TCGA-HT-7855    TCGA-HT-7856    TCGA-HT-7857    TCGA-HT-7858 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7860    TCGA-HT-7873    TCGA-HT-7874    TCGA-HT-7875    TCGA-HT-7877 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7879    TCGA-HT-7880    TCGA-HT-7881    TCGA-HT-7882    TCGA-HT-7884 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7902    TCGA-HT-8010    TCGA-HT-8011    TCGA-HT-8012    TCGA-HT-8013 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8015    TCGA-HT-8018    TCGA-HT-8019    TCGA-HT-8104    TCGA-HT-8105 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8106    TCGA-HT-8107    TCGA-HT-8108    TCGA-HT-8109    TCGA-HT-8110 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8111    TCGA-HT-8113    TCGA-HT-8114    TCGA-HT-8558    TCGA-HT-8563 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8564    TCGA-HT-A4DS    TCGA-HT-A4DV    TCGA-HT-A5R5    TCGA-HT-A5R7 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A5R9    TCGA-HT-A5RA    TCGA-HT-A5RB    TCGA-HT-A5RC    TCGA-HT-A614 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A615    TCGA-HT-A616    TCGA-HT-A617    TCGA-HT-A618    TCGA-HT-A619 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A61A    TCGA-HT-A61B    TCGA-HT-A61C    TCGA-HT-A74H    TCGA-HT-A74K 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A74L    TCGA-HT-A74O    TCGA-HW-7486    TCGA-HW-7487    TCGA-HW-7489 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HW-7490    TCGA-HW-7491    TCGA-HW-7493    TCGA-HW-7495    TCGA-HW-8319 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HW-8320    TCGA-HW-8321    TCGA-HW-8322    TCGA-HW-A5KJ    TCGA-HW-A5KK 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HW-A5KL    TCGA-HW-A5KM    TCGA-IK-7675    TCGA-IK-8125    TCGA-KT-A74X 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-KT-A7W1    TCGA-P5-A5ET    TCGA-P5-A5EU    TCGA-P5-A5EV    TCGA-P5-A5EW 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A5EX    TCGA-P5-A5EY    TCGA-P5-A5EZ    TCGA-P5-A5F0    TCGA-P5-A5F1 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A5F2    TCGA-P5-A5F4    TCGA-P5-A72U    TCGA-P5-A72W    TCGA-P5-A72X 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A72Z    TCGA-P5-A730    TCGA-P5-A731    TCGA-P5-A733    TCGA-P5-A735 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A737    TCGA-P5-A77W    TCGA-P5-A77X    TCGA-P5-A780    TCGA-P5-A781 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A65R    TCGA-QH-A65S    TCGA-QH-A65V    TCGA-QH-A65X    TCGA-QH-A65Z 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A6CS    TCGA-QH-A6CU    TCGA-QH-A6CV    TCGA-QH-A6CX    TCGA-QH-A6CY 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A6CZ    TCGA-QH-A6X3    TCGA-QH-A6X4    TCGA-QH-A6X5    TCGA-QH-A6X8 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A6X9    TCGA-QH-A6XA    TCGA-QH-A6XC    TCGA-QH-A86X    TCGA-QH-A870 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-R8-A6MK    TCGA-R8-A6ML    TCGA-R8-A6MO    TCGA-R8-A6YH    TCGA-R8-A73M 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-RY-A83X    TCGA-RY-A83Y    TCGA-RY-A83Z    TCGA-RY-A840    TCGA-RY-A843 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-RY-A845    TCGA-RY-A847    TCGA-S9-A6TS    TCGA-S9-A6TU    TCGA-S9-A6TV 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6TW    TCGA-S9-A6TX    TCGA-S9-A6TY    TCGA-S9-A6TZ    TCGA-S9-A6U0 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6U1    TCGA-S9-A6U2    TCGA-S9-A6U5    TCGA-S9-A6U6    TCGA-S9-A6U8 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6UA    TCGA-S9-A6UB    TCGA-S9-A6WD    TCGA-S9-A6WE    TCGA-S9-A6WG 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6WH    TCGA-S9-A6WI    TCGA-S9-A6WL    TCGA-S9-A6WM    TCGA-S9-A6WN 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6WO    TCGA-S9-A6WP    TCGA-S9-A6WQ    TCGA-S9-A7IQ    TCGA-S9-A7IS 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7IX    TCGA-S9-A7IY    TCGA-S9-A7IZ    TCGA-S9-A7J0    TCGA-S9-A7J1 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7J2    TCGA-S9-A7J3    TCGA-S9-A7QW    TCGA-S9-A7QX    TCGA-S9-A7QY 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7QZ    TCGA-S9-A7R1    TCGA-S9-A7R2    TCGA-S9-A7R3    TCGA-S9-A7R4 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7R7    TCGA-S9-A7R8    TCGA-S9-A89V    TCGA-S9-A89Z    TCGA-TM-A7C3 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A7C4    TCGA-TM-A7C5    TCGA-TM-A7CA    TCGA-TM-A7CF    TCGA-TM-A84B 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A84C    TCGA-TM-A84F    TCGA-TM-A84G    TCGA-TM-A84H    TCGA-TM-A84I 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A84J    TCGA-TM-A84L    TCGA-TM-A84M    TCGA-TM-A84O    TCGA-TM-A84Q 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A84R    TCGA-TM-A84S    TCGA-TM-A84T    TCGA-TQ-A7RF    TCGA-TQ-A7RG 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RH    TCGA-TQ-A7RI    TCGA-TQ-A7RJ    TCGA-TQ-A7RK    TCGA-TQ-A7RM 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RN    TCGA-TQ-A7RO    TCGA-TQ-A7RP    TCGA-TQ-A7RQ    TCGA-TQ-A7RR 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RS    TCGA-TQ-A7RU    TCGA-TQ-A7RV    TCGA-TQ-A7RW    TCGA-TQ-A8XE 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-VM-A8C8    TCGA-VM-A8C9    TCGA-VM-A8CA    TCGA-VM-A8CB    TCGA-VM-A8CD 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-VM-A8CE    TCGA-VM-A8CF    TCGA-VM-A8CH    TCGA-VV-A829    TCGA-VV-A86M 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-VW-A7QS    TCGA-VW-A8FI    TCGA-W9-A837    TCGA-WH-A86K    TCGA-WY-A858 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-WY-A859    TCGA-WY-A85A    TCGA-WY-A85B    TCGA-WY-A85C    TCGA-WY-A85D 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-WY-A85E 
"REN WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  REN MUTATED        0      0      1      0      1      0
  REN WILD-TYPE     99     77    119     57     62     92
D30V14, multiclass
[1] "Remove cluster labels:" "REN MUTATED"           
clus
  REN MUTATED REN WILD-TYPE 
            2           506 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5281    TCGA-DB-A4X9 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD    TCGA-DB-A4XE 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L    TCGA-DB-A64O 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S    TCGA-DB-A64U 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K    TCGA-DB-A75L 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141    TCGA-DH-5142 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B    TCGA-DH-A66D 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US    TCGA-DH-A7UT 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849    TCGA-DU-5851 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855    TCGA-DU-5870 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392    TCGA-DU-6393 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397    TCGA-DU-6399 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403    TCGA-DU-6404 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408    TCGA-DU-6410 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008    TCGA-DU-7009 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7010    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7014    TCGA-DU-7015 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7018    TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7294    TCGA-DU-7298 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302    TCGA-DU-7304 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161    TCGA-DU-8162 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8166    TCGA-DU-8167 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS    TCGA-DU-A5TT 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2    TCGA-DU-A6S3 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A6S6    TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K    TCGA-DU-A76L 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8    TCGA-DU-A7TA 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-DU-A7TB    TCGA-DU-A7TC    TCGA-DU-A7TG    TCGA-DU-A7TI    TCGA-DU-A7TJ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-5302    TCGA-E1-5303    TCGA-E1-5304    TCGA-E1-5305    TCGA-E1-5307 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-5311    TCGA-E1-5318    TCGA-E1-5319    TCGA-E1-5322    TCGA-E1-A7YD 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YE    TCGA-E1-A7YH    TCGA-E1-A7YI    TCGA-E1-A7YJ    TCGA-E1-A7YK 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YL    TCGA-E1-A7YM    TCGA-E1-A7YN    TCGA-E1-A7YO    TCGA-E1-A7YQ 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7YS    TCGA-E1-A7YU    TCGA-E1-A7YV    TCGA-E1-A7YW    TCGA-E1-A7YY 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-E1-A7Z2    TCGA-E1-A7Z3    TCGA-E1-A7Z4    TCGA-E1-A7Z6    TCGA-EZ-7264 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-F6-A8O3    TCGA-F6-A8O4    TCGA-FG-5962    TCGA-FG-5963    TCGA-FG-5964 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-5965    TCGA-FG-6688    TCGA-FG-6689    TCGA-FG-6690    TCGA-FG-6691 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-6692    TCGA-FG-7634    TCGA-FG-7636    TCGA-FG-7637    TCGA-FG-7638 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-7641    TCGA-FG-7643    TCGA-FG-8181    TCGA-FG-8182    TCGA-FG-8185 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-8186    TCGA-FG-8187    TCGA-FG-8188    TCGA-FG-8189    TCGA-FG-8191 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A4MT    TCGA-FG-A4MU    TCGA-FG-A4MW    TCGA-FG-A4MX    TCGA-FG-A4MY 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A60J    TCGA-FG-A60K    TCGA-FG-A60L    TCGA-FG-A6IZ    TCGA-FG-A6J1 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A6J3    TCGA-FG-A70Y    TCGA-FG-A70Z    TCGA-FG-A710    TCGA-FG-A711 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-FG-A713    TCGA-FG-A87N    TCGA-FG-A87Q    TCGA-FN-7833    TCGA-HT-7467 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7468    TCGA-HT-7469    TCGA-HT-7470    TCGA-HT-7471    TCGA-HT-7472 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7473    TCGA-HT-7474    TCGA-HT-7475    TCGA-HT-7476    TCGA-HT-7477 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7478    TCGA-HT-7479    TCGA-HT-7480    TCGA-HT-7481    TCGA-HT-7482 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7483    TCGA-HT-7485    TCGA-HT-7601    TCGA-HT-7602    TCGA-HT-7603 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7604    TCGA-HT-7605    TCGA-HT-7606    TCGA-HT-7607    TCGA-HT-7608 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7609    TCGA-HT-7610    TCGA-HT-7611    TCGA-HT-7616    TCGA-HT-7620 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7676    TCGA-HT-7677    TCGA-HT-7680    TCGA-HT-7681    TCGA-HT-7684 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7686    TCGA-HT-7687    TCGA-HT-7688    TCGA-HT-7689    TCGA-HT-7690 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7691    TCGA-HT-7692    TCGA-HT-7693    TCGA-HT-7694    TCGA-HT-7695 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7854    TCGA-HT-7855    TCGA-HT-7856    TCGA-HT-7857    TCGA-HT-7858 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7860    TCGA-HT-7873    TCGA-HT-7874    TCGA-HT-7875    TCGA-HT-7877 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7879    TCGA-HT-7880    TCGA-HT-7881    TCGA-HT-7882    TCGA-HT-7884 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-7902    TCGA-HT-8010    TCGA-HT-8011    TCGA-HT-8012    TCGA-HT-8013 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8015    TCGA-HT-8018    TCGA-HT-8019    TCGA-HT-8104    TCGA-HT-8105 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8106    TCGA-HT-8107    TCGA-HT-8108    TCGA-HT-8109    TCGA-HT-8110 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8111    TCGA-HT-8113    TCGA-HT-8114    TCGA-HT-8558    TCGA-HT-8563 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-8564    TCGA-HT-A4DS    TCGA-HT-A4DV    TCGA-HT-A5R5    TCGA-HT-A5R7 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A5R9    TCGA-HT-A5RA    TCGA-HT-A5RB    TCGA-HT-A5RC    TCGA-HT-A614 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A615    TCGA-HT-A616    TCGA-HT-A617    TCGA-HT-A618    TCGA-HT-A619 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A61A    TCGA-HT-A61B    TCGA-HT-A61C    TCGA-HT-A74H    TCGA-HT-A74K 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HT-A74L    TCGA-HT-A74O    TCGA-HW-7486    TCGA-HW-7487    TCGA-HW-7489 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HW-7490    TCGA-HW-7491    TCGA-HW-7493    TCGA-HW-7495    TCGA-HW-8319 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HW-8320    TCGA-HW-8321    TCGA-HW-8322    TCGA-HW-A5KJ    TCGA-HW-A5KK 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-HW-A5KL    TCGA-HW-A5KM    TCGA-IK-7675    TCGA-IK-8125    TCGA-KT-A74X 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-KT-A7W1    TCGA-P5-A5ET    TCGA-P5-A5EU    TCGA-P5-A5EV    TCGA-P5-A5EW 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A5EX    TCGA-P5-A5EY    TCGA-P5-A5EZ    TCGA-P5-A5F0    TCGA-P5-A5F1 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A5F2    TCGA-P5-A5F4    TCGA-P5-A72U    TCGA-P5-A72W    TCGA-P5-A72X 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A72Z    TCGA-P5-A730    TCGA-P5-A731    TCGA-P5-A733    TCGA-P5-A735 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-P5-A737    TCGA-P5-A77W    TCGA-P5-A77X    TCGA-P5-A780    TCGA-P5-A781 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A65R    TCGA-QH-A65S    TCGA-QH-A65V    TCGA-QH-A65X    TCGA-QH-A65Z 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A6CS    TCGA-QH-A6CU    TCGA-QH-A6CV    TCGA-QH-A6CX    TCGA-QH-A6CY 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A6CZ    TCGA-QH-A6X3    TCGA-QH-A6X4    TCGA-QH-A6X5    TCGA-QH-A6X8 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-QH-A6X9    TCGA-QH-A6XA    TCGA-QH-A6XC    TCGA-QH-A86X    TCGA-QH-A870 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-R8-A6MK    TCGA-R8-A6ML    TCGA-R8-A6MO    TCGA-R8-A6YH    TCGA-R8-A73M 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-RY-A83X    TCGA-RY-A83Y    TCGA-RY-A83Z    TCGA-RY-A840    TCGA-RY-A843 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-RY-A845    TCGA-RY-A847    TCGA-S9-A6TS    TCGA-S9-A6TU    TCGA-S9-A6TV 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6TW    TCGA-S9-A6TX    TCGA-S9-A6TY    TCGA-S9-A6TZ    TCGA-S9-A6U0 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6U1    TCGA-S9-A6U2    TCGA-S9-A6U5    TCGA-S9-A6U6    TCGA-S9-A6U8 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6UA    TCGA-S9-A6UB    TCGA-S9-A6WD    TCGA-S9-A6WE    TCGA-S9-A6WG 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6WH    TCGA-S9-A6WI    TCGA-S9-A6WL    TCGA-S9-A6WM    TCGA-S9-A6WN 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A6WO    TCGA-S9-A6WP    TCGA-S9-A6WQ    TCGA-S9-A7IQ    TCGA-S9-A7IS 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7IX    TCGA-S9-A7IY    TCGA-S9-A7IZ    TCGA-S9-A7J0    TCGA-S9-A7J1 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7J2    TCGA-S9-A7J3    TCGA-S9-A7QW    TCGA-S9-A7QX    TCGA-S9-A7QY 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7QZ    TCGA-S9-A7R1    TCGA-S9-A7R2    TCGA-S9-A7R3    TCGA-S9-A7R4 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-S9-A7R7    TCGA-S9-A7R8    TCGA-S9-A89V    TCGA-S9-A89Z    TCGA-TM-A7C3 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A7C4    TCGA-TM-A7C5    TCGA-TM-A7CA    TCGA-TM-A7CF    TCGA-TM-A84B 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A84C    TCGA-TM-A84F    TCGA-TM-A84G    TCGA-TM-A84H    TCGA-TM-A84I 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A84J    TCGA-TM-A84L    TCGA-TM-A84M    TCGA-TM-A84O    TCGA-TM-A84Q 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TM-A84R    TCGA-TM-A84S    TCGA-TM-A84T    TCGA-TQ-A7RF    TCGA-TQ-A7RG 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RH    TCGA-TQ-A7RI    TCGA-TQ-A7RJ    TCGA-TQ-A7RK    TCGA-TQ-A7RM 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RN    TCGA-TQ-A7RO    TCGA-TQ-A7RP    TCGA-TQ-A7RQ    TCGA-TQ-A7RR 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-TQ-A7RS    TCGA-TQ-A7RU    TCGA-TQ-A7RV    TCGA-TQ-A7RW    TCGA-TQ-A8XE 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-VM-A8C8    TCGA-VM-A8C9    TCGA-VM-A8CA    TCGA-VM-A8CB    TCGA-VM-A8CD 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-VM-A8CE    TCGA-VM-A8CF    TCGA-VM-A8CH    TCGA-VV-A829    TCGA-VV-A86M 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-VW-A7QS    TCGA-VW-A8FI    TCGA-W9-A837    TCGA-WH-A86K    TCGA-WY-A858 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-WY-A859    TCGA-WY-A85A    TCGA-WY-A85B    TCGA-WY-A85C    TCGA-WY-A85D 
"REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" "REN WILD-TYPE" 
   TCGA-WY-A85E 
"REN WILD-TYPE" 

Clustering(31) Variable = MUC17 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MUC17 MUTATED       10      4      1      4
  MUC17 WILD-TYPE     68     37     63     53
D31V1, multiclass
        clus
vv       MUC17 MUTATED MUC17 WILD-TYPE
  CLUS_1            10              68
  CLUS_2             4              37
  CLUS_3             1              63
  CLUS_4             4              53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MUC17 MUTATED        8      1      3      7
  MUC17 WILD-TYPE     55     49     45     72
D31V2, multiclass
        clus
vv       MUC17 MUTATED MUC17 WILD-TYPE
  CLUS_1             8              55
  CLUS_2             1              49
  CLUS_3             3              45
  CLUS_4             7              72
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MUC17 MUTATED        5      7      3      7
  MUC17 WILD-TYPE     65     91     41     56
D31V3, multiclass
        clus
vv       MUC17 MUTATED MUC17 WILD-TYPE
  CLUS_1             5              65
  CLUS_2             7              91
  CLUS_3             3              41
  CLUS_4             7              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MUC17 MUTATED       10      4      8
  MUC17 WILD-TYPE    128     57     68
D31V4, multiclass
        clus
vv       MUC17 MUTATED MUC17 WILD-TYPE
  CLUS_1            10             128
  CLUS_2             4              57
  CLUS_3             8              68
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MUC17 MUTATED       23     23      4
  MUC17 WILD-TYPE    269    409     58
D31V5, multiclass
        clus
vv       MUC17 MUTATED MUC17 WILD-TYPE
  CLUS_1            23             269
  CLUS_2            23             409
  CLUS_3             4              58
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MUC17 MUTATED       13     13      5      7
  MUC17 WILD-TYPE    140    210     83    154
D31V6, multiclass
        clus
vv       MUC17 MUTATED MUC17 WILD-TYPE
  CLUS_1            13             140
  CLUS_2            13             210
  CLUS_3             5              83
  CLUS_4             7             154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MUC17 MUTATED       15      8      4      7
  MUC17 WILD-TYPE    170    147    134     88
D31V7, multiclass
        clus
vv       MUC17 MUTATED MUC17 WILD-TYPE
  CLUS_1            15             170
  CLUS_2             8             147
  CLUS_3             4             134
  CLUS_4             7              88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MUC17 MUTATED       16     10      8
  MUC17 WILD-TYPE    189    210    140
D31V8, multiclass
        clus
vv       MUC17 MUTATED MUC17 WILD-TYPE
  CLUS_1            16             189
  CLUS_2            10             210
  CLUS_3             8             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MUC17 MUTATED       20     13      7
  MUC17 WILD-TYPE    218    178    221
D31V9, multiclass
        clus
vv       MUC17 MUTATED MUC17 WILD-TYPE
  CLUS_1            20             218
  CLUS_2            13             178
  CLUS_3             7             221
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MUC17 MUTATED       15     14     11
  MUC17 WILD-TYPE    181    177    259
D31V10, multiclass
        clus
vv       MUC17 MUTATED MUC17 WILD-TYPE
  CLUS_1            15             181
  CLUS_2            14             177
  CLUS_3            11             259
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MUC17 MUTATED        9      4      0     15
  MUC17 WILD-TYPE    131    103     83    167
D31V11, multiclass
        clus
vv       MUC17 MUTATED MUC17 WILD-TYPE
  CLUS_1             9             131
  CLUS_2             4             103
  CLUS_3             0              83
  CLUS_4            15             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MUC17 MUTATED        6     13      9
  MUC17 WILD-TYPE    217    173     94
D31V12, multiclass
        clus
vv       MUC17 MUTATED MUC17 WILD-TYPE
  CLUS_1             6             217
  CLUS_2            13             173
  CLUS_3             9              94
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MUC17 MUTATED        7      4      1     16
  MUC17 WILD-TYPE    120    115    105    140
D31V13, multiclass
        clus
vv       MUC17 MUTATED MUC17 WILD-TYPE
  CLUS_1             7             120
  CLUS_2             4             115
  CLUS_3             1             105
  CLUS_4            16             140
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  MUC17 MUTATED        5      4     10      1      3      5
  MUC17 WILD-TYPE     94     73    110     56     60     87
D31V14, multiclass
        clus
vv       MUC17 MUTATED MUC17 WILD-TYPE
  CLUS_1             5              94
  CLUS_2             4              73
  CLUS_3            10             110
  CLUS_4             1              56
  CLUS_5             3              60
  CLUS_6             5              87
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(32) Variable = HTRA2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTRA2 MUTATED        0      0      0      0
  HTRA2 WILD-TYPE     78     41     64     57
D32V1, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTRA2 MUTATED        0      0      0      0
  HTRA2 WILD-TYPE     63     50     48     79
D32V2, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTRA2 MUTATED        0      0      0      0
  HTRA2 WILD-TYPE     70     98     44     63
D32V3, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HTRA2 MUTATED        0      0      0
  HTRA2 WILD-TYPE    138     61     76
D32V4, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HTRA2 MUTATED        0      5      0
  HTRA2 WILD-TYPE    292    427     62
D32V5, multiclass
        clus
vv       HTRA2 MUTATED HTRA2 WILD-TYPE
  CLUS_1             0             292
  CLUS_2             5             427
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTRA2 MUTATED        0      3      1      1
  HTRA2 WILD-TYPE    153    220     87    160
D32V6, multiclass
        clus
vv       HTRA2 MUTATED HTRA2 WILD-TYPE
  CLUS_1             0             153
  CLUS_2             3             220
  CLUS_3             1              87
  CLUS_4             1             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTRA2 MUTATED        3      1      0      0
  HTRA2 WILD-TYPE    182    154    138     95
D32V7, multiclass
        clus
vv       HTRA2 MUTATED HTRA2 WILD-TYPE
  CLUS_1             3             182
  CLUS_2             1             154
  CLUS_3             0             138
  CLUS_4             0              95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HTRA2 MUTATED        2      1      1
  HTRA2 WILD-TYPE    203    219    147
D32V8, multiclass
        clus
vv       HTRA2 MUTATED HTRA2 WILD-TYPE
  CLUS_1             2             203
  CLUS_2             1             219
  CLUS_3             1             147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HTRA2 MUTATED        1      2      2
  HTRA2 WILD-TYPE    237    189    226
D32V9, multiclass
        clus
vv       HTRA2 MUTATED HTRA2 WILD-TYPE
  CLUS_1             1             237
  CLUS_2             2             189
  CLUS_3             2             226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HTRA2 MUTATED        1      2      2
  HTRA2 WILD-TYPE    195    189    268
D32V10, multiclass
        clus
vv       HTRA2 MUTATED HTRA2 WILD-TYPE
  CLUS_1             1             195
  CLUS_2             2             189
  CLUS_3             2             268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTRA2 MUTATED        3      0      1      1
  HTRA2 WILD-TYPE    137    107     82    181
D32V11, multiclass
        clus
vv       HTRA2 MUTATED HTRA2 WILD-TYPE
  CLUS_1             3             137
  CLUS_2             0             107
  CLUS_3             1              82
  CLUS_4             1             181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HTRA2 MUTATED        3      2      0
  HTRA2 WILD-TYPE    220    184    103
D32V12, multiclass
        clus
vv       HTRA2 MUTATED HTRA2 WILD-TYPE
  CLUS_1             3             220
  CLUS_2             2             184
  CLUS_3             0             103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTRA2 MUTATED        1      2      0      1
  HTRA2 WILD-TYPE    126    117    106    155
D32V13, multiclass
        clus
vv       HTRA2 MUTATED HTRA2 WILD-TYPE
  CLUS_1             1             126
  CLUS_2             2             117
  CLUS_3             0             106
  CLUS_4             1             155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  HTRA2 MUTATED        2      1      1      0      0      0
  HTRA2 WILD-TYPE     97     76    119     57     63     92
D32V14, multiclass
        clus
vv       HTRA2 MUTATED HTRA2 WILD-TYPE
  CLUS_1             2              97
  CLUS_2             1              76
  CLUS_3             1             119
  CLUS_4             0              57
  CLUS_5             0              63
  CLUS_6             0              92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(33) Variable = RPL5 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPL5 MUTATED        2      2      2      0
  RPL5 WILD-TYPE     76     39     62     57
D33V1, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            2             76
  CLUS_2            2             39
  CLUS_3            2             62
  CLUS_4            0             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPL5 MUTATED        3      0      1      2
  RPL5 WILD-TYPE     60     50     47     77
D33V2, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            3             60
  CLUS_2            0             50
  CLUS_3            1             47
  CLUS_4            2             77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPL5 MUTATED        1      3      1      2
  RPL5 WILD-TYPE     69     95     43     61
D33V3, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            1             69
  CLUS_2            3             95
  CLUS_3            1             43
  CLUS_4            2             61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPL5 MUTATED        3      3      1
  RPL5 WILD-TYPE    135     58     75
D33V4, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            3            135
  CLUS_2            3             58
  CLUS_3            1             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPL5 MUTATED        7      2      1
  RPL5 WILD-TYPE    285    430     61
D33V5, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            7            285
  CLUS_2            2            430
  CLUS_3            1             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPL5 MUTATED        5      0      0      1
  RPL5 WILD-TYPE    148    223     88    160
D33V6, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            5            148
  CLUS_2            0            223
  CLUS_3            0             88
  CLUS_4            1            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPL5 MUTATED        4      1      2      0
  RPL5 WILD-TYPE    181    154    136     95
D33V7, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            4            181
  CLUS_2            1            154
  CLUS_3            2            136
  CLUS_4            0             95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPL5 MUTATED        3      3      1
  RPL5 WILD-TYPE    202    217    147
D33V8, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            3            202
  CLUS_2            3            217
  CLUS_3            1            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPL5 MUTATED        5      1      0
  RPL5 WILD-TYPE    233    190    228
D33V9, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            5            233
  CLUS_2            1            190
  CLUS_3            0            228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPL5 MUTATED        4      1      1
  RPL5 WILD-TYPE    192    190    269
D33V10, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            4            192
  CLUS_2            1            190
  CLUS_3            1            269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPL5 MUTATED        0      2      1      0
  RPL5 WILD-TYPE    140    105     82    182
D33V11, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            0            140
  CLUS_2            2            105
  CLUS_3            1             82
  CLUS_4            0            182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RPL5 MUTATED        0      1      2
  RPL5 WILD-TYPE    223    185    101
D33V12, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            0            223
  CLUS_2            1            185
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPL5 MUTATED        0      1      1      1
  RPL5 WILD-TYPE    127    118    105    155
D33V13, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            0            127
  CLUS_2            1            118
  CLUS_3            1            105
  CLUS_4            1            155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  RPL5 MUTATED        0      0      0      0      1      2
  RPL5 WILD-TYPE     99     77    120     57     62     90
D33V14, multiclass
        clus
vv       RPL5 MUTATED RPL5 WILD-TYPE
  CLUS_1            0             99
  CLUS_2            0             77
  CLUS_3            0            120
  CLUS_4            0             57
  CLUS_5            1             62
  CLUS_6            2             90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(34) Variable = BRAF MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRAF MUTATED        1      1      2      0
  BRAF WILD-TYPE     77     40     62     57
D34V1, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            1             77
  CLUS_2            1             40
  CLUS_3            2             62
  CLUS_4            0             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRAF MUTATED        2      0      1      1
  BRAF WILD-TYPE     61     50     47     78
D34V2, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            2             61
  CLUS_2            0             50
  CLUS_3            1             47
  CLUS_4            1             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRAF MUTATED        2      1      0      3
  BRAF WILD-TYPE     68     97     44     60
D34V3, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            2             68
  CLUS_2            1             97
  CLUS_3            0             44
  CLUS_4            3             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRAF MUTATED        2      4      0
  BRAF WILD-TYPE    136     57     76
D34V4, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            2            136
  CLUS_2            4             57
  CLUS_3            0             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRAF MUTATED        7      3      1
  BRAF WILD-TYPE    285    429     61
D34V5, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            7            285
  CLUS_2            3            429
  CLUS_3            1             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRAF MUTATED        3      0      4      0
  BRAF WILD-TYPE    150    223     84    161
D34V6, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            3            150
  CLUS_2            0            223
  CLUS_3            4             84
  CLUS_4            0            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRAF MUTATED        3      2      1      2
  BRAF WILD-TYPE    182    153    137     93
D34V7, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            3            182
  CLUS_2            2            153
  CLUS_3            1            137
  CLUS_4            2             93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRAF MUTATED        4      1      3
  BRAF WILD-TYPE    201    219    145
D34V8, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            4            201
  CLUS_2            1            219
  CLUS_3            3            145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRAF MUTATED        5      3      0
  BRAF WILD-TYPE    233    188    228
D34V9, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            5            233
  CLUS_2            3            188
  CLUS_3            0            228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRAF MUTATED        4      1      3
  BRAF WILD-TYPE    192    190    267
D34V10, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            4            192
  CLUS_2            1            190
  CLUS_3            3            267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRAF MUTATED        0      2      0      3
  BRAF WILD-TYPE    140    105     83    179
D34V11, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            0            140
  CLUS_2            2            105
  CLUS_3            0             83
  CLUS_4            3            179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRAF MUTATED        0      3      2
  BRAF WILD-TYPE    223    183    101
D34V12, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            0            223
  CLUS_2            3            183
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRAF MUTATED        1      0      0      4
  BRAF WILD-TYPE    126    119    106    152
D34V13, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            1            126
  CLUS_2            0            119
  CLUS_3            0            106
  CLUS_4            4            152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  BRAF MUTATED        0      0      3      0      1      1
  BRAF WILD-TYPE     99     77    117     57     62     91
D34V14, multiclass
        clus
vv       BRAF MUTATED BRAF WILD-TYPE
  CLUS_1            0             99
  CLUS_2            0             77
  CLUS_3            3            117
  CLUS_4            0             57
  CLUS_5            1             62
  CLUS_6            1             91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(35) Variable = KDR MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KDR MUTATED        1      2      1      4
  KDR WILD-TYPE     77     39     63     53
D35V1, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           1            77
  CLUS_2           2            39
  CLUS_3           1            63
  CLUS_4           4            53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KDR MUTATED        1      3      1      3
  KDR WILD-TYPE     62     47     47     76
D35V2, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           1            62
  CLUS_2           3            47
  CLUS_3           1            47
  CLUS_4           3            76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KDR MUTATED        2      1      3      2
  KDR WILD-TYPE     68     97     41     61
D35V3, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           2            68
  CLUS_2           1            97
  CLUS_3           3            41
  CLUS_4           2            61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  KDR MUTATED        6      1      1
  KDR WILD-TYPE    132     60     75
D35V4, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           6           132
  CLUS_2           1            60
  CLUS_3           1            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  KDR MUTATED        9      3      1
  KDR WILD-TYPE    283    429     61
D35V5, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           9           283
  CLUS_2           3           429
  CLUS_3           1            61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KDR MUTATED        6      1      1      0
  KDR WILD-TYPE    147    222     87    161
D35V6, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           6           147
  CLUS_2           1           222
  CLUS_3           1            87
  CLUS_4           0           161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KDR MUTATED        4      2      3      1
  KDR WILD-TYPE    181    153    135     94
D35V7, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           4           181
  CLUS_2           2           153
  CLUS_3           3           135
  CLUS_4           1            94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  KDR MUTATED        7      2      1
  KDR WILD-TYPE    198    218    147
D35V8, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           7           198
  CLUS_2           2           218
  CLUS_3           1           147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  KDR MUTATED        4      2      0
  KDR WILD-TYPE    234    189    228
D35V9, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           4           234
  CLUS_2           2           189
  CLUS_3           0           228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  KDR MUTATED        3      1      2
  KDR WILD-TYPE    193    190    268
D35V10, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           3           193
  CLUS_2           1           190
  CLUS_3           2           268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KDR MUTATED        0      2      0      3
  KDR WILD-TYPE    140    105     83    179
D35V11, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           0           140
  CLUS_2           2           105
  CLUS_3           0            83
  CLUS_4           3           179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  KDR MUTATED        0      2      3
  KDR WILD-TYPE    223    184    100
D35V12, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           0           223
  CLUS_2           2           184
  CLUS_3           3           100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KDR MUTATED        2      0      0      3
  KDR WILD-TYPE    125    119    106    153
D35V13, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           2           125
  CLUS_2           0           119
  CLUS_3           0           106
  CLUS_4           3           153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  KDR MUTATED        0      0      2      0      2      1
  KDR WILD-TYPE     99     77    118     57     61     91
D35V14, multiclass
        clus
vv       KDR MUTATED KDR WILD-TYPE
  CLUS_1           0            99
  CLUS_2           0            77
  CLUS_3           2           118
  CLUS_4           0            57
  CLUS_5           2            61
  CLUS_6           1            91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(36) Variable = RBPJ MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RBPJ MUTATED        0      0      0      0
  RBPJ WILD-TYPE     78     41     64     57
D36V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RBPJ MUTATED        0      0      0      0
  RBPJ WILD-TYPE     63     50     48     79
D36V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RBPJ MUTATED        0      0      0      0
  RBPJ WILD-TYPE     70     98     44     63
D36V3, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RBPJ MUTATED        0      0      0
  RBPJ WILD-TYPE    138     61     76
D36V4, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RBPJ MUTATED        0      7      0
  RBPJ WILD-TYPE    292    425     62
D36V5, multiclass
        clus
vv       RBPJ MUTATED RBPJ WILD-TYPE
  CLUS_1            0            292
  CLUS_2            7            425
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RBPJ MUTATED        0      1      1      5
  RBPJ WILD-TYPE    153    222     87    156
D36V6, multiclass
        clus
vv       RBPJ MUTATED RBPJ WILD-TYPE
  CLUS_1            0            153
  CLUS_2            1            222
  CLUS_3            1             87
  CLUS_4            5            156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RBPJ MUTATED        3      0      2      0
  RBPJ WILD-TYPE    182    155    136     95
D36V7, multiclass
        clus
vv       RBPJ MUTATED RBPJ WILD-TYPE
  CLUS_1            3            182
  CLUS_2            0            155
  CLUS_3            2            136
  CLUS_4            0             95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RBPJ MUTATED        5      0      0
  RBPJ WILD-TYPE    200    220    148
D36V8, multiclass
        clus
vv       RBPJ MUTATED RBPJ WILD-TYPE
  CLUS_1            5            200
  CLUS_2            0            220
  CLUS_3            0            148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RBPJ MUTATED        2      5      0
  RBPJ WILD-TYPE    236    186    228
D36V9, multiclass
        clus
vv       RBPJ MUTATED RBPJ WILD-TYPE
  CLUS_1            2            236
  CLUS_2            5            186
  CLUS_3            0            228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RBPJ MUTATED        0      2      5
  RBPJ WILD-TYPE    196    189    265
D36V10, multiclass
        clus
vv       RBPJ MUTATED RBPJ WILD-TYPE
  CLUS_1            0            196
  CLUS_2            2            189
  CLUS_3            5            265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RBPJ MUTATED        0      2      1      4
  RBPJ WILD-TYPE    140    105     82    178
D36V11, multiclass
        clus
vv       RBPJ MUTATED RBPJ WILD-TYPE
  CLUS_1            0            140
  CLUS_2            2            105
  CLUS_3            1             82
  CLUS_4            4            178
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RBPJ MUTATED        0      5      2
  RBPJ WILD-TYPE    223    181    101
D36V12, multiclass
        clus
vv       RBPJ MUTATED RBPJ WILD-TYPE
  CLUS_1            0            223
  CLUS_2            5            181
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RBPJ MUTATED        1      2      0      4
  RBPJ WILD-TYPE    126    117    106    152
D36V13, multiclass
        clus
vv       RBPJ MUTATED RBPJ WILD-TYPE
  CLUS_1            1            126
  CLUS_2            2            117
  CLUS_3            0            106
  CLUS_4            4            152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  RBPJ MUTATED        0      3      2      0      0      2
  RBPJ WILD-TYPE     99     74    118     57     63     90
D36V14, multiclass
        clus
vv       RBPJ MUTATED RBPJ WILD-TYPE
  CLUS_1            0             99
  CLUS_2            3             74
  CLUS_3            2            118
  CLUS_4            0             57
  CLUS_5            0             63
  CLUS_6            2             90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(37) Variable = NRAS MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NRAS MUTATED        0      0      1      0
  NRAS WILD-TYPE     78     41     63     57
D37V1, multiclass
[1] "Remove cluster labels:" "NRAS MUTATED"          
clus
  NRAS MUTATED NRAS WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3650     TCGA-12-3652 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NRAS MUTATED        0      0      0      1
  NRAS WILD-TYPE     63     50     48     78
D37V2, multiclass
[1] "Remove cluster labels:" "NRAS MUTATED"          
clus
  NRAS MUTATED NRAS WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3650     TCGA-12-3652 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NRAS MUTATED        1      0      0      0
  NRAS WILD-TYPE     69     98     44     63
D37V3, multiclass
[1] "Remove cluster labels:" "NRAS MUTATED"          
clus
  NRAS MUTATED NRAS WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NRAS MUTATED        1      0      0
  NRAS WILD-TYPE    137     61     76
D37V4, multiclass
[1] "Remove cluster labels:" "NRAS MUTATED"          
clus
  NRAS MUTATED NRAS WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" "NRAS WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"NRAS WILD-TYPE" "NRAS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NRAS MUTATED        1      4      0
  NRAS WILD-TYPE    291    428     62
D37V5, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            1            291
  CLUS_2            4            428
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NRAS MUTATED        0      1      0      3
  NRAS WILD-TYPE    153    222     88    158
D37V6, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            0            153
  CLUS_2            1            222
  CLUS_3            0             88
  CLUS_4            3            158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NRAS MUTATED        0      1      1      3
  NRAS WILD-TYPE    185    154    137     92
D37V7, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            0            185
  CLUS_2            1            154
  CLUS_3            1            137
  CLUS_4            3             92
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NRAS MUTATED        1      2      2
  NRAS WILD-TYPE    204    218    146
D37V8, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            1            204
  CLUS_2            2            218
  CLUS_3            2            146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NRAS MUTATED        0      3      1
  NRAS WILD-TYPE    238    188    227
D37V9, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            0            238
  CLUS_2            3            188
  CLUS_3            1            227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NRAS MUTATED        0      1      3
  NRAS WILD-TYPE    196    190    267
D37V10, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            0            196
  CLUS_2            1            190
  CLUS_3            3            267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NRAS MUTATED        0      0      2      2
  NRAS WILD-TYPE    140    107     81    180
D37V11, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            0            140
  CLUS_2            0            107
  CLUS_3            2             81
  CLUS_4            2            180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NRAS MUTATED        1      2      1
  NRAS WILD-TYPE    222    184    102
D37V12, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            1            222
  CLUS_2            2            184
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NRAS MUTATED        0      1      1      2
  NRAS WILD-TYPE    127    118    105    154
D37V13, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            0            127
  CLUS_2            1            118
  CLUS_3            1            105
  CLUS_4            2            154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  NRAS MUTATED        0      2      1      0      0      1
  NRAS WILD-TYPE     99     75    119     57     63     91
D37V14, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            0             99
  CLUS_2            2             75
  CLUS_3            1            119
  CLUS_4            0             57
  CLUS_5            0             63
  CLUS_6            1             91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(38) Variable = TRERF1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRERF1 MUTATED        0      0      0      0
  TRERF1 WILD-TYPE     78     41     64     57
D38V1, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRERF1 MUTATED        0      0      0      0
  TRERF1 WILD-TYPE     63     50     48     79
D38V2, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRERF1 MUTATED        0      0      0      1
  TRERF1 WILD-TYPE     70     98     44     62
D38V3, multiclass
[1] "Remove cluster labels:" "TRERF1 MUTATED"        
clus
  TRERF1 MUTATED TRERF1 WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0862 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1043       TCGA-14-1395       TCGA-14-1450 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5953 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-26-5139       TCGA-26-6173       TCGA-26-6174       TCGA-27-1830 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2502       TCGA-28-2509 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-28-2510       TCGA-28-2513       TCGA-28-2514       TCGA-28-5204 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5211 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-74-6573       TCGA-74-6575 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRERF1 MUTATED        1      0      0
  TRERF1 WILD-TYPE    137     61     76
D38V4, multiclass
[1] "Remove cluster labels:" "TRERF1 MUTATED"        
clus
  TRERF1 MUTATED TRERF1 WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0862 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1043       TCGA-14-1395       TCGA-14-1450 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5953 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-26-5139       TCGA-26-6173       TCGA-26-6174       TCGA-27-1830 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2502       TCGA-28-2509 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-28-2510       TCGA-28-2513       TCGA-28-2514       TCGA-28-5204 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5211 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-74-6573       TCGA-74-6575 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"TRERF1 WILD-TYPE" "TRERF1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRERF1 MUTATED        2      4      1
  TRERF1 WILD-TYPE    290    428     61
D38V5, multiclass
        clus
vv       TRERF1 MUTATED TRERF1 WILD-TYPE
  CLUS_1              2              290
  CLUS_2              4              428
  CLUS_3              1               61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRERF1 MUTATED        2      2      2      1
  TRERF1 WILD-TYPE    151    221     86    160
D38V6, multiclass
        clus
vv       TRERF1 MUTATED TRERF1 WILD-TYPE
  CLUS_1              2              151
  CLUS_2              2              221
  CLUS_3              2               86
  CLUS_4              1              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRERF1 MUTATED        2      2      0      2
  TRERF1 WILD-TYPE    183    153    138     93
D38V7, multiclass
        clus
vv       TRERF1 MUTATED TRERF1 WILD-TYPE
  CLUS_1              2              183
  CLUS_2              2              153
  CLUS_3              0              138
  CLUS_4              2               93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRERF1 MUTATED        3      2      1
  TRERF1 WILD-TYPE    202    218    147
D38V8, multiclass
        clus
vv       TRERF1 MUTATED TRERF1 WILD-TYPE
  CLUS_1              3              202
  CLUS_2              2              218
  CLUS_3              1              147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRERF1 MUTATED        2      2      2
  TRERF1 WILD-TYPE    236    189    226
D38V9, multiclass
        clus
vv       TRERF1 MUTATED TRERF1 WILD-TYPE
  CLUS_1              2              236
  CLUS_2              2              189
  CLUS_3              2              226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRERF1 MUTATED        0      5      1
  TRERF1 WILD-TYPE    196    186    269
D38V10, multiclass
        clus
vv       TRERF1 MUTATED TRERF1 WILD-TYPE
  CLUS_1              0              196
  CLUS_2              5              186
  CLUS_3              1              269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRERF1 MUTATED        1      3      0      2
  TRERF1 WILD-TYPE    139    104     83    180
D38V11, multiclass
        clus
vv       TRERF1 MUTATED TRERF1 WILD-TYPE
  CLUS_1              1              139
  CLUS_2              3              104
  CLUS_3              0               83
  CLUS_4              2              180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRERF1 MUTATED        2      2      2
  TRERF1 WILD-TYPE    221    184    101
D38V12, multiclass
        clus
vv       TRERF1 MUTATED TRERF1 WILD-TYPE
  CLUS_1              2              221
  CLUS_2              2              184
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRERF1 MUTATED        1      1      0      4
  TRERF1 WILD-TYPE    126    118    106    152
D38V13, multiclass
        clus
vv       TRERF1 MUTATED TRERF1 WILD-TYPE
  CLUS_1              1              126
  CLUS_2              1              118
  CLUS_3              0              106
  CLUS_4              4              152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  TRERF1 MUTATED        1      1      2      0      0      2
  TRERF1 WILD-TYPE     98     76    118     57     63     90
D38V14, multiclass
        clus
vv       TRERF1 MUTATED TRERF1 WILD-TYPE
  CLUS_1              1               98
  CLUS_2              1               76
  CLUS_3              2              118
  CLUS_4              0               57
  CLUS_5              0               63
  CLUS_6              2               90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(39) Variable = BCOR MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCOR MUTATED        1      1      2      3
  BCOR WILD-TYPE     77     40     62     54
D39V1, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            1             77
  CLUS_2            1             40
  CLUS_3            2             62
  CLUS_4            3             54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCOR MUTATED        0      2      2      3
  BCOR WILD-TYPE     63     48     46     76
D39V2, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            0             63
  CLUS_2            2             48
  CLUS_3            2             46
  CLUS_4            3             76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCOR MUTATED        0      2      3      2
  BCOR WILD-TYPE     70     96     41     61
D39V3, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            0             70
  CLUS_2            2             96
  CLUS_3            3             41
  CLUS_4            2             61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BCOR MUTATED        5      1      1
  BCOR WILD-TYPE    133     60     75
D39V4, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            5            133
  CLUS_2            1             60
  CLUS_3            1             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BCOR MUTATED        9     13      0
  BCOR WILD-TYPE    283    419     62
D39V5, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            9            283
  CLUS_2           13            419
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCOR MUTATED        4      4      2      7
  BCOR WILD-TYPE    149    219     86    154
D39V6, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            4            149
  CLUS_2            4            219
  CLUS_3            2             86
  CLUS_4            7            154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCOR MUTATED        2      4      6      2
  BCOR WILD-TYPE    183    151    132     93
D39V7, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            2            183
  CLUS_2            4            151
  CLUS_3            6            132
  CLUS_4            2             93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BCOR MUTATED        6      5      3
  BCOR WILD-TYPE    199    215    145
D39V8, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            6            199
  CLUS_2            5            215
  CLUS_3            3            145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BCOR MUTATED        5      8      4
  BCOR WILD-TYPE    233    183    224
D39V9, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            5            233
  CLUS_2            8            183
  CLUS_3            4            224
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BCOR MUTATED        3      4     10
  BCOR WILD-TYPE    193    187    260
D39V10, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            3            193
  CLUS_2            4            187
  CLUS_3           10            260
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCOR MUTATED        5      3      1      6
  BCOR WILD-TYPE    135    104     82    176
D39V11, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            5            135
  CLUS_2            3            104
  CLUS_3            1             82
  CLUS_4            6            176
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BCOR MUTATED        5      6      4
  BCOR WILD-TYPE    218    180     99
D39V12, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            5            218
  CLUS_2            6            180
  CLUS_3            4             99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCOR MUTATED        1      5      3      6
  BCOR WILD-TYPE    126    114    103    150
D39V13, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            1            126
  CLUS_2            5            114
  CLUS_3            3            103
  CLUS_4            6            150
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  BCOR MUTATED        2      5      4      0      1      3
  BCOR WILD-TYPE     97     72    116     57     62     89
D39V14, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            2             97
  CLUS_2            5             72
  CLUS_3            4            116
  CLUS_4            0             57
  CLUS_5            1             62
  CLUS_6            3             89
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(40) Variable = PTPN11 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPN11 MUTATED        1      0      1      1
  PTPN11 WILD-TYPE     77     41     63     56
D40V1, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              1               77
  CLUS_2              0               41
  CLUS_3              1               63
  CLUS_4              1               56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPN11 MUTATED        1      0      0      2
  PTPN11 WILD-TYPE     62     50     48     77
D40V2, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              1               62
  CLUS_2              0               50
  CLUS_3              0               48
  CLUS_4              2               77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPN11 MUTATED        1      0      2      1
  PTPN11 WILD-TYPE     69     98     42     62
D40V3, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              1               69
  CLUS_2              0               98
  CLUS_3              2               42
  CLUS_4              1               62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTPN11 MUTATED        2      1      1
  PTPN11 WILD-TYPE    136     60     75
D40V4, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              2              136
  CLUS_2              1               60
  CLUS_3              1               75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTPN11 MUTATED        5      4      1
  PTPN11 WILD-TYPE    287    428     61
D40V5, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              5              287
  CLUS_2              4              428
  CLUS_3              1               61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPN11 MUTATED        4      1      3      1
  PTPN11 WILD-TYPE    149    222     85    160
D40V6, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              4              149
  CLUS_2              1              222
  CLUS_3              3               85
  CLUS_4              1              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPN11 MUTATED        3      1      1      3
  PTPN11 WILD-TYPE    182    154    137     92
D40V7, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              3              182
  CLUS_2              1              154
  CLUS_3              1              137
  CLUS_4              3               92
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTPN11 MUTATED        5      1      2
  PTPN11 WILD-TYPE    200    219    146
D40V8, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              5              200
  CLUS_2              1              219
  CLUS_3              2              146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTPN11 MUTATED        5      3      1
  PTPN11 WILD-TYPE    233    188    227
D40V9, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              5              233
  CLUS_2              3              188
  CLUS_3              1              227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTPN11 MUTATED        5      2      2
  PTPN11 WILD-TYPE    191    189    268
D40V10, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              5              191
  CLUS_2              2              189
  CLUS_3              2              268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPN11 MUTATED        3      3      0      1
  PTPN11 WILD-TYPE    137    104     83    181
D40V11, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              3              137
  CLUS_2              3              104
  CLUS_3              0               83
  CLUS_4              1              181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTPN11 MUTATED        1      1      5
  PTPN11 WILD-TYPE    222    185     98
D40V12, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              1              222
  CLUS_2              1              185
  CLUS_3              5               98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPN11 MUTATED        4      2      0      1
  PTPN11 WILD-TYPE    123    117    106    155
D40V13, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              4              123
  CLUS_2              2              117
  CLUS_3              0              106
  CLUS_4              1              155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  PTPN11 MUTATED        1      0      1      0      5      0
  PTPN11 WILD-TYPE     98     77    119     57     58     92
D40V14, multiclass
        clus
vv       PTPN11 MUTATED PTPN11 WILD-TYPE
  CLUS_1              1               98
  CLUS_2              0               77
  CLUS_3              1              119
  CLUS_4              0               57
  CLUS_5              5               58
  CLUS_6              0               92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(41) Variable = MX2 MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MX2 MUTATED        2      0      2      0
  MX2 WILD-TYPE     76     41     62     57
D41V1, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           2            76
  CLUS_2           0            41
  CLUS_3           2            62
  CLUS_4           0            57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MX2 MUTATED        1      0      1      2
  MX2 WILD-TYPE     62     50     47     77
D41V2, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           1            62
  CLUS_2           0            50
  CLUS_3           1            47
  CLUS_4           2            77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MX2 MUTATED        2      0      1      1
  MX2 WILD-TYPE     68     98     43     62
D41V3, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           2            68
  CLUS_2           0            98
  CLUS_3           1            43
  CLUS_4           1            62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MX2 MUTATED        1      1      2
  MX2 WILD-TYPE    137     60     74
D41V4, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           1           137
  CLUS_2           1            60
  CLUS_3           2            74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MX2 MUTATED        6      3      0
  MX2 WILD-TYPE    286    429     62
D41V5, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           6           286
  CLUS_2           3           429
  CLUS_3           0            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MX2 MUTATED        2      1      0      2
  MX2 WILD-TYPE    151    222     88    159
D41V6, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           2           151
  CLUS_2           1           222
  CLUS_3           0            88
  CLUS_4           2           159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MX2 MUTATED        3      1      1      1
  MX2 WILD-TYPE    182    154    137     94
D41V7, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           3           182
  CLUS_2           1           154
  CLUS_3           1           137
  CLUS_4           1            94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MX2 MUTATED        3      3      0
  MX2 WILD-TYPE    202    217    148
D41V8, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           3           202
  CLUS_2           3           217
  CLUS_3           0           148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MX2 MUTATED        1      1      2
  MX2 WILD-TYPE    237    190    226
D41V9, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           1           237
  CLUS_2           1           190
  CLUS_3           2           226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MX2 MUTATED        1      1      2
  MX2 WILD-TYPE    195    190    268
D41V10, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           1           195
  CLUS_2           1           190
  CLUS_3           2           268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MX2 MUTATED        0      2      1      1
  MX2 WILD-TYPE    140    105     82    181
D41V11, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           0           140
  CLUS_2           2           105
  CLUS_3           1            82
  CLUS_4           1           181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MX2 MUTATED        2      1      1
  MX2 WILD-TYPE    221    185    102
D41V12, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           2           221
  CLUS_2           1           185
  CLUS_3           1           102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MX2 MUTATED        1      2      0      1
  MX2 WILD-TYPE    126    117    106    155
D41V13, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           1           126
  CLUS_2           2           117
  CLUS_3           0           106
  CLUS_4           1           155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  MX2 MUTATED        0      1      1      1      1      0
  MX2 WILD-TYPE     99     76    119     56     62     92
D41V14, multiclass
        clus
vv       MX2 MUTATED MX2 WILD-TYPE
  CLUS_1           0            99
  CLUS_2           1            76
  CLUS_3           1           119
  CLUS_4           1            56
  CLUS_5           1            62
  CLUS_6           0            92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(42) Variable = FAM47C MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM47C MUTATED        0      0      2      1
  FAM47C WILD-TYPE     78     41     62     56
D42V1, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              0               78
  CLUS_2              0               41
  CLUS_3              2               62
  CLUS_4              1               56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM47C MUTATED        0      1      2      0
  FAM47C WILD-TYPE     63     49     46     79
D42V2, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              0               63
  CLUS_2              1               49
  CLUS_3              2               46
  CLUS_4              0               79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM47C MUTATED        0      2      2      1
  FAM47C WILD-TYPE     70     96     42     62
D42V3, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              0               70
  CLUS_2              2               96
  CLUS_3              2               42
  CLUS_4              1               62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM47C MUTATED        2      1      2
  FAM47C WILD-TYPE    136     60     74
D42V4, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              2              136
  CLUS_2              1               60
  CLUS_3              2               74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM47C MUTATED        6     15      2
  FAM47C WILD-TYPE    286    417     60
D42V5, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              6              286
  CLUS_2             15              417
  CLUS_3              2               60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM47C MUTATED        3      7      4      7
  FAM47C WILD-TYPE    150    216     84    154
D42V6, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              3              150
  CLUS_2              7              216
  CLUS_3              4               84
  CLUS_4              7              154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM47C MUTATED        6      7      4      2
  FAM47C WILD-TYPE    179    148    134     93
D42V7, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              6              179
  CLUS_2              7              148
  CLUS_3              4              134
  CLUS_4              2               93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM47C MUTATED        6      6      7
  FAM47C WILD-TYPE    199    214    141
D42V8, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              6              199
  CLUS_2              6              214
  CLUS_3              7              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM47C MUTATED        5     11      5
  FAM47C WILD-TYPE    233    180    223
D42V9, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              5              233
  CLUS_2             11              180
  CLUS_3              5              223
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM47C MUTATED        4      1     16
  FAM47C WILD-TYPE    192    190    254
D42V10, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              4              192
  CLUS_2              1              190
  CLUS_3             16              254
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM47C MUTATED        3      4      2     10
  FAM47C WILD-TYPE    137    103     81    172
D42V11, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              3              137
  CLUS_2              4              103
  CLUS_3              2               81
  CLUS_4             10              172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM47C MUTATED        5     12      2
  FAM47C WILD-TYPE    218    174    101
D42V12, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              5              218
  CLUS_2             12              174
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM47C MUTATED        0      2      4     13
  FAM47C WILD-TYPE    127    117    102    143
D42V13, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              0              127
  CLUS_2              2              117
  CLUS_3              4              102
  CLUS_4             13              143
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  FAM47C MUTATED        0      1      8      1      1      8
  FAM47C WILD-TYPE     99     76    112     56     62     84
D42V14, multiclass
        clus
vv       FAM47C MUTATED FAM47C WILD-TYPE
  CLUS_1              0               99
  CLUS_2              1               76
  CLUS_3              8              112
  CLUS_4              1               56
  CLUS_5              1               62
  CLUS_6              8               84
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(43) Variable = DDX5 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDX5 MUTATED        1      0      0      2
  DDX5 WILD-TYPE     77     41     64     55
D43V1, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            1             77
  CLUS_2            0             41
  CLUS_3            0             64
  CLUS_4            2             55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDX5 MUTATED        1      1      0      1
  DDX5 WILD-TYPE     62     49     48     78
D43V2, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            1             62
  CLUS_2            1             49
  CLUS_3            0             48
  CLUS_4            1             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDX5 MUTATED        0      2      1      1
  DDX5 WILD-TYPE     70     96     43     62
D43V3, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            0             70
  CLUS_2            2             96
  CLUS_3            1             43
  CLUS_4            1             62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DDX5 MUTATED        1      1      2
  DDX5 WILD-TYPE    137     60     74
D43V4, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            1            137
  CLUS_2            1             60
  CLUS_3            2             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DDX5 MUTATED        4      5      0
  DDX5 WILD-TYPE    288    427     62
D43V5, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            4            288
  CLUS_2            5            427
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDX5 MUTATED        3      2      0      2
  DDX5 WILD-TYPE    150    221     88    159
D43V6, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            3            150
  CLUS_2            2            221
  CLUS_3            0             88
  CLUS_4            2            159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDX5 MUTATED        4      1      1      1
  DDX5 WILD-TYPE    181    154    137     94
D43V7, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            4            181
  CLUS_2            1            154
  CLUS_3            1            137
  CLUS_4            1             94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DDX5 MUTATED        4      2      1
  DDX5 WILD-TYPE    201    218    147
D43V8, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            4            201
  CLUS_2            2            218
  CLUS_3            1            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DDX5 MUTATED        2      1      3
  DDX5 WILD-TYPE    236    190    225
D43V9, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            2            236
  CLUS_2            1            190
  CLUS_3            3            225
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DDX5 MUTATED        1      3      2
  DDX5 WILD-TYPE    195    188    268
D43V10, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            3            188
  CLUS_3            2            268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDX5 MUTATED        0      2      0      3
  DDX5 WILD-TYPE    140    105     83    179
D43V11, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            0            140
  CLUS_2            2            105
  CLUS_3            0             83
  CLUS_4            3            179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DDX5 MUTATED        1      3      1
  DDX5 WILD-TYPE    222    183    102
D43V12, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            1            222
  CLUS_2            3            183
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDX5 MUTATED        1      1      0      3
  DDX5 WILD-TYPE    126    118    106    153
D43V13, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            1            126
  CLUS_2            1            118
  CLUS_3            0            106
  CLUS_4            3            153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DDX5 MUTATED        0      1      1      0      0      3
  DDX5 WILD-TYPE     99     76    119     57     63     89
D43V14, multiclass
        clus
vv       DDX5 MUTATED DDX5 WILD-TYPE
  CLUS_1            0             99
  CLUS_2            1             76
  CLUS_3            1            119
  CLUS_4            0             57
  CLUS_5            0             63
  CLUS_6            3             89
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(44) Variable = SETD2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SETD2 MUTATED        1      2      0      0
  SETD2 WILD-TYPE     77     39     64     57
D44V1, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             1              77
  CLUS_2             2              39
  CLUS_3             0              64
  CLUS_4             0              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SETD2 MUTATED        2      1      0      0
  SETD2 WILD-TYPE     61     49     48     79
D44V2, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             2              61
  CLUS_2             1              49
  CLUS_3             0              48
  CLUS_4             0              79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SETD2 MUTATED        1      0      1      1
  SETD2 WILD-TYPE     69     98     43     62
D44V3, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             1              69
  CLUS_2             0              98
  CLUS_3             1              43
  CLUS_4             1              62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SETD2 MUTATED        2      0      1
  SETD2 WILD-TYPE    136     61     75
D44V4, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             2             136
  CLUS_2             0              61
  CLUS_3             1              75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SETD2 MUTATED        5      5      3
  SETD2 WILD-TYPE    287    427     59
D44V5, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             5             287
  CLUS_2             5             427
  CLUS_3             3              59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SETD2 MUTATED        5      3      3      2
  SETD2 WILD-TYPE    148    220     85    159
D44V6, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             5             148
  CLUS_2             3             220
  CLUS_3             3              85
  CLUS_4             2             159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SETD2 MUTATED        4      2      3      1
  SETD2 WILD-TYPE    181    153    135     94
D44V7, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             4             181
  CLUS_2             2             153
  CLUS_3             3             135
  CLUS_4             1              94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SETD2 MUTATED        5      4      1
  SETD2 WILD-TYPE    200    216    147
D44V8, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             5             200
  CLUS_2             4             216
  CLUS_3             1             147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SETD2 MUTATED        9      2      2
  SETD2 WILD-TYPE    229    189    226
D44V9, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             9             229
  CLUS_2             2             189
  CLUS_3             2             226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SETD2 MUTATED        5      5      3
  SETD2 WILD-TYPE    191    186    267
D44V10, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             5             191
  CLUS_2             5             186
  CLUS_3             3             267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SETD2 MUTATED        1      4      2      3
  SETD2 WILD-TYPE    139    103     81    179
D44V11, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             1             139
  CLUS_2             4             103
  CLUS_3             2              81
  CLUS_4             3             179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SETD2 MUTATED        3      2      5
  SETD2 WILD-TYPE    220    184     98
D44V12, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             3             220
  CLUS_2             2             184
  CLUS_3             5              98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SETD2 MUTATED        2      4      0      4
  SETD2 WILD-TYPE    125    115    106    152
D44V13, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             2             125
  CLUS_2             4             115
  CLUS_3             0             106
  CLUS_4             4             152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  SETD2 MUTATED        1      3      3      1      1      1
  SETD2 WILD-TYPE     98     74    117     56     62     91
D44V14, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             1              98
  CLUS_2             3              74
  CLUS_3             3             117
  CLUS_4             1              56
  CLUS_5             1              62
  CLUS_6             1              91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(45) Variable = ZNF709 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF709 MUTATED        1      0      0      0
  ZNF709 WILD-TYPE     77     41     64     57
D45V1, multiclass
[1] "Remove cluster labels:" "ZNF709 MUTATED"        
clus
  ZNF709 MUTATED ZNF709 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF709 MUTATED        1      0      0      0
  ZNF709 WILD-TYPE     62     50     48     79
D45V2, multiclass
[1] "Remove cluster labels:" "ZNF709 MUTATED"        
clus
  ZNF709 MUTATED ZNF709 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF709 MUTATED        2      0      0      0
  ZNF709 WILD-TYPE     68     98     44     63
D45V3, multiclass
[1] "Remove cluster labels:" "ZNF709 MUTATED"        
clus
  ZNF709 MUTATED ZNF709 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6698 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0790       TCGA-14-0813 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-14-0817       TCGA-14-0862       TCGA-14-0871       TCGA-14-1043 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-14-1395       TCGA-14-1450       TCGA-14-1456       TCGA-14-1823 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-14-1825       TCGA-14-1829       TCGA-14-2554       TCGA-14-3476 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-14-4157       TCGA-15-0742       TCGA-15-1444       TCGA-16-0846 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-16-0861       TCGA-16-1045       TCGA-16-1048       TCGA-19-1390 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-1790       TCGA-19-2619       TCGA-19-2620       TCGA-19-2623 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-2624       TCGA-19-2625       TCGA-19-2629       TCGA-19-2631 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-4068       TCGA-19-5947       TCGA-19-5950       TCGA-19-5951 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-5952       TCGA-19-5953       TCGA-19-5954       TCGA-19-5955 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-26-6173 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-26-6174       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5211       TCGA-28-5213       TCGA-28-5214 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-87-5896 
"ZNF709 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF709 MUTATED        0      1      1
  ZNF709 WILD-TYPE    138     60     75
D45V4, multiclass
[1] "Remove cluster labels:" "ZNF709 MUTATED"        
clus
  ZNF709 MUTATED ZNF709 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6698 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0790       TCGA-14-0813 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-14-0817       TCGA-14-0862       TCGA-14-0871       TCGA-14-1043 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-14-1395       TCGA-14-1450       TCGA-14-1456       TCGA-14-1823 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-14-1825       TCGA-14-1829       TCGA-14-2554       TCGA-14-3476 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-14-4157       TCGA-15-0742       TCGA-15-1444       TCGA-16-0846 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-16-0861       TCGA-16-1045       TCGA-16-1048       TCGA-19-1390 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-1790       TCGA-19-2619       TCGA-19-2620       TCGA-19-2623 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-2624       TCGA-19-2625       TCGA-19-2629       TCGA-19-2631 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-4068       TCGA-19-5947       TCGA-19-5950       TCGA-19-5951 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-5952       TCGA-19-5953       TCGA-19-5954       TCGA-19-5955 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-26-6173 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-26-6174       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5211       TCGA-28-5213       TCGA-28-5214 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" "ZNF709 WILD-TYPE" 
      TCGA-87-5896 
"ZNF709 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF709 MUTATED        2      3      0
  ZNF709 WILD-TYPE    290    429     62
D45V5, multiclass
        clus
vv       ZNF709 MUTATED ZNF709 WILD-TYPE
  CLUS_1              2              290
  CLUS_2              3              429
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF709 MUTATED        0      1      2      1
  ZNF709 WILD-TYPE    153    222     86    160
D45V6, multiclass
        clus
vv       ZNF709 MUTATED ZNF709 WILD-TYPE
  CLUS_1              0              153
  CLUS_2              1              222
  CLUS_3              2               86
  CLUS_4              1              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF709 MUTATED        2      2      0      0
  ZNF709 WILD-TYPE    183    153    138     95
D45V7, multiclass
        clus
vv       ZNF709 MUTATED ZNF709 WILD-TYPE
  CLUS_1              2              183
  CLUS_2              2              153
  CLUS_3              0              138
  CLUS_4              0               95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF709 MUTATED        1      1      2
  ZNF709 WILD-TYPE    204    219    146
D45V8, multiclass
        clus
vv       ZNF709 MUTATED ZNF709 WILD-TYPE
  CLUS_1              1              204
  CLUS_2              1              219
  CLUS_3              2              146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF709 MUTATED        1      2      1
  ZNF709 WILD-TYPE    237    189    227
D45V9, multiclass
        clus
vv       ZNF709 MUTATED ZNF709 WILD-TYPE
  CLUS_1              1              237
  CLUS_2              2              189
  CLUS_3              1              227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF709 MUTATED        1      1      2
  ZNF709 WILD-TYPE    195    190    268
D45V10, multiclass
        clus
vv       ZNF709 MUTATED ZNF709 WILD-TYPE
  CLUS_1              1              195
  CLUS_2              1              190
  CLUS_3              2              268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF709 MUTATED        1      0      0      2
  ZNF709 WILD-TYPE    139    107     83    180
D45V11, multiclass
        clus
vv       ZNF709 MUTATED ZNF709 WILD-TYPE
  CLUS_1              1              139
  CLUS_2              0              107
  CLUS_3              0               83
  CLUS_4              2              180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF709 MUTATED        1      2      0
  ZNF709 WILD-TYPE    222    184    103
D45V12, multiclass
        clus
vv       ZNF709 MUTATED ZNF709 WILD-TYPE
  CLUS_1              1              222
  CLUS_2              2              184
  CLUS_3              0              103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF709 MUTATED        2      0      0      1
  ZNF709 WILD-TYPE    125    119    106    155
D45V13, multiclass
        clus
vv       ZNF709 MUTATED ZNF709 WILD-TYPE
  CLUS_1              2              125
  CLUS_2              0              119
  CLUS_3              0              106
  CLUS_4              1              155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  ZNF709 MUTATED        0      1      2      0      0      0
  ZNF709 WILD-TYPE     99     76    118     57     63     92
D45V14, multiclass
        clus
vv       ZNF709 MUTATED ZNF709 WILD-TYPE
  CLUS_1              0               99
  CLUS_2              1               76
  CLUS_3              2              118
  CLUS_4              0               57
  CLUS_5              0               63
  CLUS_6              0               92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(46) Variable = FAM126B MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM126B MUTATED        1      0      3      0
  FAM126B WILD-TYPE     77     41     61     57
D46V1, multiclass
        clus
vv       FAM126B MUTATED FAM126B WILD-TYPE
  CLUS_1               1                77
  CLUS_2               0                41
  CLUS_3               3                61
  CLUS_4               0                57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM126B MUTATED        1      0      3      0
  FAM126B WILD-TYPE     62     50     45     79
D46V2, multiclass
        clus
vv       FAM126B MUTATED FAM126B WILD-TYPE
  CLUS_1               1                62
  CLUS_2               0                50
  CLUS_3               3                45
  CLUS_4               0                79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM126B MUTATED        2      2      0      0
  FAM126B WILD-TYPE     68     96     44     63
D46V3, multiclass
        clus
vv       FAM126B MUTATED FAM126B WILD-TYPE
  CLUS_1               2                68
  CLUS_2               2                96
  CLUS_3               0                44
  CLUS_4               0                63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM126B MUTATED        1      1      2
  FAM126B WILD-TYPE    137     60     74
D46V4, multiclass
        clus
vv       FAM126B MUTATED FAM126B WILD-TYPE
  CLUS_1               1               137
  CLUS_2               1                60
  CLUS_3               2                74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM126B MUTATED        5      2      1
  FAM126B WILD-TYPE    287    430     61
D46V5, multiclass
        clus
vv       FAM126B MUTATED FAM126B WILD-TYPE
  CLUS_1               5               287
  CLUS_2               2               430
  CLUS_3               1                61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM126B MUTATED        2      1      0      1
  FAM126B WILD-TYPE    151    222     88    160
D46V6, multiclass
        clus
vv       FAM126B MUTATED FAM126B WILD-TYPE
  CLUS_1               2               151
  CLUS_2               1               222
  CLUS_3               0                88
  CLUS_4               1               160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM126B MUTATED        2      1      3      0
  FAM126B WILD-TYPE    183    154    135     95
D46V7, multiclass
        clus
vv       FAM126B MUTATED FAM126B WILD-TYPE
  CLUS_1               2               183
  CLUS_2               1               154
  CLUS_3               3               135
  CLUS_4               0                95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM126B MUTATED        3      2      1
  FAM126B WILD-TYPE    202    218    147
D46V8, multiclass
        clus
vv       FAM126B MUTATED FAM126B WILD-TYPE
  CLUS_1               3               202
  CLUS_2               2               218
  CLUS_3               1               147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM126B MUTATED        3      0      1
  FAM126B WILD-TYPE    235    191    227
D46V9, multiclass
        clus
vv       FAM126B MUTATED FAM126B WILD-TYPE
  CLUS_1               3               235
  CLUS_2               0               191
  CLUS_3               1               227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM126B MUTATED        1      2      1
  FAM126B WILD-TYPE    195    189    269
D46V10, multiclass
        clus
vv       FAM126B MUTATED FAM126B WILD-TYPE
  CLUS_1               1               195
  CLUS_2               2               189
  CLUS_3               1               269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM126B MUTATED        1      2      1      0
  FAM126B WILD-TYPE    139    105     82    182
D46V11, multiclass
        clus
vv       FAM126B MUTATED FAM126B WILD-TYPE
  CLUS_1               1               139
  CLUS_2               2               105
  CLUS_3               1                82
  CLUS_4               0               182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM126B MUTATED        2      0      2
  FAM126B WILD-TYPE    221    186    101
D46V12, multiclass
        clus
vv       FAM126B MUTATED FAM126B WILD-TYPE
  CLUS_1               2               221
  CLUS_2               0               186
  CLUS_3               2               101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM126B MUTATED        0      2      1      1
  FAM126B WILD-TYPE    127    117    105    155
D46V13, multiclass
        clus
vv       FAM126B MUTATED FAM126B WILD-TYPE
  CLUS_1               0               127
  CLUS_2               2               117
  CLUS_3               1               105
  CLUS_4               1               155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  FAM126B MUTATED        1      1      0      1      0      1
  FAM126B WILD-TYPE     98     76    120     56     63     91
D46V14, multiclass
        clus
vv       FAM126B MUTATED FAM126B WILD-TYPE
  CLUS_1               1                98
  CLUS_2               1                76
  CLUS_3               0               120
  CLUS_4               1                56
  CLUS_5               0                63
  CLUS_6               1                91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(47) Variable = MYST4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYST4 MUTATED        0      0      0      0
  MYST4 WILD-TYPE     78     41     64     57
D47V1, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYST4 MUTATED        0      0      0      0
  MYST4 WILD-TYPE     63     50     48     79
D47V2, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYST4 MUTATED        0      0      0      1
  MYST4 WILD-TYPE     70     98     44     62
D47V3, multiclass
[1] "Remove cluster labels:" "MYST4 MUTATED"         
clus
  MYST4 MUTATED MYST4 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0781 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYST4 MUTATED        1      0      0
  MYST4 WILD-TYPE    137     61     76
D47V4, multiclass
[1] "Remove cluster labels:" "MYST4 MUTATED"         
clus
  MYST4 MUTATED MYST4 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0781 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"MYST4 WILD-TYPE" "MYST4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYST4 MUTATED        2      9      1
  MYST4 WILD-TYPE    290    423     61
D47V5, multiclass
        clus
vv       MYST4 MUTATED MYST4 WILD-TYPE
  CLUS_1             2             290
  CLUS_2             9             423
  CLUS_3             1              61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYST4 MUTATED        3      2      0      7
  MYST4 WILD-TYPE    150    221     88    154
D47V6, multiclass
        clus
vv       MYST4 MUTATED MYST4 WILD-TYPE
  CLUS_1             3             150
  CLUS_2             2             221
  CLUS_3             0              88
  CLUS_4             7             154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYST4 MUTATED        6      2      0      2
  MYST4 WILD-TYPE    179    153    138     93
D47V7, multiclass
        clus
vv       MYST4 MUTATED MYST4 WILD-TYPE
  CLUS_1             6             179
  CLUS_2             2             153
  CLUS_3             0             138
  CLUS_4             2              93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYST4 MUTATED        6      3      1
  MYST4 WILD-TYPE    199    217    147
D47V8, multiclass
        clus
vv       MYST4 MUTATED MYST4 WILD-TYPE
  CLUS_1             6             199
  CLUS_2             3             217
  CLUS_3             1             147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYST4 MUTATED        2      5      4
  MYST4 WILD-TYPE    236    186    224
D47V9, multiclass
        clus
vv       MYST4 MUTATED MYST4 WILD-TYPE
  CLUS_1             2             236
  CLUS_2             5             186
  CLUS_3             4             224
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYST4 MUTATED        1      3      7
  MYST4 WILD-TYPE    195    188    263
D47V10, multiclass
        clus
vv       MYST4 MUTATED MYST4 WILD-TYPE
  CLUS_1             1             195
  CLUS_2             3             188
  CLUS_3             7             263
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYST4 MUTATED        1      3      4      3
  MYST4 WILD-TYPE    139    104     79    179
D47V11, multiclass
        clus
vv       MYST4 MUTATED MYST4 WILD-TYPE
  CLUS_1             1             139
  CLUS_2             3             104
  CLUS_3             4              79
  CLUS_4             3             179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYST4 MUTATED        5      4      2
  MYST4 WILD-TYPE    218    182    101
D47V12, multiclass
        clus
vv       MYST4 MUTATED MYST4 WILD-TYPE
  CLUS_1             5             218
  CLUS_2             4             182
  CLUS_3             2             101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYST4 MUTATED        0      2      5      4
  MYST4 WILD-TYPE    127    117    101    152
D47V13, multiclass
        clus
vv       MYST4 MUTATED MYST4 WILD-TYPE
  CLUS_1             0             127
  CLUS_2             2             117
  CLUS_3             5             101
  CLUS_4             4             152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  MYST4 MUTATED        1      2      2      1      1      4
  MYST4 WILD-TYPE     98     75    118     56     62     88
D47V14, multiclass
        clus
vv       MYST4 MUTATED MYST4 WILD-TYPE
  CLUS_1             1              98
  CLUS_2             2              75
  CLUS_3             2             118
  CLUS_4             1              56
  CLUS_5             1              62
  CLUS_6             4              88
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(48) Variable = TLR6 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TLR6 MUTATED        0      0      3      1
  TLR6 WILD-TYPE     78     41     61     56
D48V1, multiclass
        clus
vv       TLR6 MUTATED TLR6 WILD-TYPE
  CLUS_1            0             78
  CLUS_2            0             41
  CLUS_3            3             61
  CLUS_4            1             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TLR6 MUTATED        0      0      3      1
  TLR6 WILD-TYPE     63     50     45     78
D48V2, multiclass
        clus
vv       TLR6 MUTATED TLR6 WILD-TYPE
  CLUS_1            0             63
  CLUS_2            0             50
  CLUS_3            3             45
  CLUS_4            1             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TLR6 MUTATED        0      2      1      2
  TLR6 WILD-TYPE     70     96     43     61
D48V3, multiclass
        clus
vv       TLR6 MUTATED TLR6 WILD-TYPE
  CLUS_1            0             70
  CLUS_2            2             96
  CLUS_3            1             43
  CLUS_4            2             61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TLR6 MUTATED        1      2      2
  TLR6 WILD-TYPE    137     59     74
D48V4, multiclass
        clus
vv       TLR6 MUTATED TLR6 WILD-TYPE
  CLUS_1            1            137
  CLUS_2            2             59
  CLUS_3            2             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TLR6 MUTATED        6      2      0
  TLR6 WILD-TYPE    286    430     62
D48V5, multiclass
        clus
vv       TLR6 MUTATED TLR6 WILD-TYPE
  CLUS_1            6            286
  CLUS_2            2            430
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TLR6 MUTATED        2      0      2      0
  TLR6 WILD-TYPE    151    223     86    161
D48V6, multiclass
        clus
vv       TLR6 MUTATED TLR6 WILD-TYPE
  CLUS_1            2            151
  CLUS_2            0            223
  CLUS_3            2             86
  CLUS_4            0            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TLR6 MUTATED        1      1      1      1
  TLR6 WILD-TYPE    184    154    137     94
D48V7, multiclass
        clus
vv       TLR6 MUTATED TLR6 WILD-TYPE
  CLUS_1            1            184
  CLUS_2            1            154
  CLUS_3            1            137
  CLUS_4            1             94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TLR6 MUTATED        1      2      1
  TLR6 WILD-TYPE    204    218    147
D48V8, multiclass
        clus
vv       TLR6 MUTATED TLR6 WILD-TYPE
  CLUS_1            1            204
  CLUS_2            2            218
  CLUS_3            1            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TLR6 MUTATED        2      2      0
  TLR6 WILD-TYPE    236    189    228
D48V9, multiclass
        clus
vv       TLR6 MUTATED TLR6 WILD-TYPE
  CLUS_1            2            236
  CLUS_2            2            189
  CLUS_3            0            228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TLR6 MUTATED        2      0      2
  TLR6 WILD-TYPE    194    191    268
D48V10, multiclass
        clus
vv       TLR6 MUTATED TLR6 WILD-TYPE
  CLUS_1            2            194
  CLUS_2            0            191
  CLUS_3            2            268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TLR6 MUTATED        0      0      0      3
  TLR6 WILD-TYPE    140    107     83    179
D48V11, multiclass
        clus
vv       TLR6 MUTATED TLR6 WILD-TYPE
  CLUS_1            0            140
  CLUS_2            0            107
  CLUS_3            0             83
  CLUS_4            3            179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TLR6 MUTATED        0      2      1
  TLR6 WILD-TYPE    223    184    102
D48V12, multiclass
        clus
vv       TLR6 MUTATED TLR6 WILD-TYPE
  CLUS_1            0            223
  CLUS_2            2            184
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TLR6 MUTATED        1      0      0      2
  TLR6 WILD-TYPE    126    119    106    154
D48V13, multiclass
        clus
vv       TLR6 MUTATED TLR6 WILD-TYPE
  CLUS_1            1            126
  CLUS_2            0            119
  CLUS_3            0            106
  CLUS_4            2            154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  TLR6 MUTATED        0      0      2      0      1      0
  TLR6 WILD-TYPE     99     77    118     57     62     92
D48V14, multiclass
        clus
vv       TLR6 MUTATED TLR6 WILD-TYPE
  CLUS_1            0             99
  CLUS_2            0             77
  CLUS_3            2            118
  CLUS_4            0             57
  CLUS_5            1             62
  CLUS_6            0             92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(49) Variable = EGFR MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGFR MUTATED       26      8     23     11
  EGFR WILD-TYPE     52     33     41     46
D49V1, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1           26             52
  CLUS_2            8             33
  CLUS_3           23             41
  CLUS_4           11             46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGFR MUTATED       18      7     17     26
  EGFR WILD-TYPE     45     43     31     53
D49V2, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1           18             45
  CLUS_2            7             43
  CLUS_3           17             31
  CLUS_4           26             53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGFR MUTATED       19     31      7     17
  EGFR WILD-TYPE     51     67     37     46
D49V3, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1           19             51
  CLUS_2           31             67
  CLUS_3            7             37
  CLUS_4           17             46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGFR MUTATED       30     19     25
  EGFR WILD-TYPE    108     42     51
D49V4, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1           30            108
  CLUS_2           19             42
  CLUS_3           25             51
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGFR MUTATED       95      9      3
  EGFR WILD-TYPE    197    423     59
D49V5, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1           95            197
  CLUS_2            9            423
  CLUS_3            3             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGFR MUTATED       45      0      9      2
  EGFR WILD-TYPE    108    223     79    159
D49V6, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1           45            108
  CLUS_2            0            223
  CLUS_3            9             79
  CLUS_4            2            159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGFR MUTATED       25     14     18      7
  EGFR WILD-TYPE    160    141    120     88
D49V7, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1           25            160
  CLUS_2           14            141
  CLUS_3           18            120
  CLUS_4            7             88
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGFR MUTATED       18     35     11
  EGFR WILD-TYPE    187    185    137
D49V8, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1           18            187
  CLUS_2           35            185
  CLUS_3           11            137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGFR MUTATED       71      9      0
  EGFR WILD-TYPE    167    182    228
D49V9, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1           71            167
  CLUS_2            9            182
  CLUS_3            0            228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGFR MUTATED       69      2      9
  EGFR WILD-TYPE    127    189    261
D49V10, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1           69            127
  CLUS_2            2            189
  CLUS_3            9            261
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGFR MUTATED       11     11      0     13
  EGFR WILD-TYPE    129     96     83    169
D49V11, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1           11            129
  CLUS_2           11             96
  CLUS_3            0             83
  CLUS_4           13            169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGFR MUTATED        1      9     25
  EGFR WILD-TYPE    222    177     78
D49V12, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1            1            222
  CLUS_2            9            177
  CLUS_3           25             78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGFR MUTATED        6     17      0     12
  EGFR WILD-TYPE    121    102    106    144
D49V13, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1            6            121
  CLUS_2           17            102
  CLUS_3            0            106
  CLUS_4           12            144
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  EGFR MUTATED        0      1      8      0     24      2
  EGFR WILD-TYPE     99     76    112     57     39     90
D49V14, multiclass
        clus
vv       EGFR MUTATED EGFR WILD-TYPE
  CLUS_1            0             99
  CLUS_2            1             76
  CLUS_3            8            112
  CLUS_4            0             57
  CLUS_5           24             39
  CLUS_6            2             90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(50) Variable = ACADS MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACADS MUTATED        2      0      0      1
  ACADS WILD-TYPE     76     41     64     56
D50V1, multiclass
        clus
vv       ACADS MUTATED ACADS WILD-TYPE
  CLUS_1             2              76
  CLUS_2             0              41
  CLUS_3             0              64
  CLUS_4             1              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACADS MUTATED        2      1      0      0
  ACADS WILD-TYPE     61     49     48     79
D50V2, multiclass
        clus
vv       ACADS MUTATED ACADS WILD-TYPE
  CLUS_1             2              61
  CLUS_2             1              49
  CLUS_3             0              48
  CLUS_4             0              79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACADS MUTATED        2      0      0      1
  ACADS WILD-TYPE     68     98     44     62
D50V3, multiclass
        clus
vv       ACADS MUTATED ACADS WILD-TYPE
  CLUS_1             2              68
  CLUS_2             0              98
  CLUS_3             0              44
  CLUS_4             1              62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACADS MUTATED        1      1      1
  ACADS WILD-TYPE    137     60     75
D50V4, multiclass
        clus
vv       ACADS MUTATED ACADS WILD-TYPE
  CLUS_1             1             137
  CLUS_2             1              60
  CLUS_3             1              75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACADS MUTATED        3      1      1
  ACADS WILD-TYPE    289    431     61
D50V5, multiclass
        clus
vv       ACADS MUTATED ACADS WILD-TYPE
  CLUS_1             3             289
  CLUS_2             1             431
  CLUS_3             1              61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACADS MUTATED        3      0      0      0
  ACADS WILD-TYPE    150    223     88    161
D50V6, multiclass
        clus
vv       ACADS MUTATED ACADS WILD-TYPE
  CLUS_1             3             150
  CLUS_2             0             223
  CLUS_3             0              88
  CLUS_4             0             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACADS MUTATED        1      1      0      0
  ACADS WILD-TYPE    184    154    138     95
D50V7, multiclass
[1] "Remove cluster labels:" "ACADS MUTATED"         
clus
  ACADS MUTATED ACADS WILD-TYPE 
              2             571 
     TCGA-02-0003      TCGA-02-2470      TCGA-02-2485      TCGA-06-0126 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0128      TCGA-06-0129      TCGA-06-0130      TCGA-06-0154 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0155      TCGA-06-0189      TCGA-06-0238      TCGA-06-0644 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0650      TCGA-06-0875      TCGA-06-0876      TCGA-06-0877 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0879      TCGA-06-0882      TCGA-06-0939 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-1804      TCGA-06-1806      TCGA-06-2557      TCGA-06-2558 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-2559      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2570      TCGA-06-5408 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-12-0692      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5301 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0862      TCGA-14-0871      TCGA-14-1823 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-16-0846      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2625      TCGA-19-2631      TCGA-19-4068 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-19-5953      TCGA-19-5954      TCGA-19-5955      TCGA-19-5958 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-19-5959      TCGA-19-5960      TCGA-26-1442      TCGA-26-5132 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-6173      TCGA-26-6174 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1836      TCGA-27-2518      TCGA-27-2528 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2501      TCGA-28-5208 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-28-5214      TCGA-32-1970      TCGA-32-1982      TCGA-32-1986 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-32-1991      TCGA-32-4210      TCGA-32-4211      TCGA-32-5222 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-41-6646 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-74-6573      TCGA-74-6575      TCGA-74-6577      TCGA-74-6578 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-74-6584      TCGA-76-4926      TCGA-76-4927      TCGA-76-4928 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-76-4929      TCGA-76-4931      TCGA-76-4932      TCGA-76-6192 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6656 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-CS-4938 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-4942      TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-5393      TCGA-CS-5394      TCGA-CS-5396      TCGA-CS-5397 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6665      TCGA-CS-6666 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5280 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M      TCGA-DB-A75O 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A66B      TCGA-DH-A66D 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7US      TCGA-DU-5847 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7011      TCGA-DU-7012      TCGA-DU-7013 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7014      TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7TA      TCGA-DU-A7TB 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YQ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z6      TCGA-EZ-7264 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-7634      TCGA-FG-7636 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60L      TCGA-FG-A6IZ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-HT-7467 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8564      TCGA-HT-A4DV      TCGA-HT-A5R5 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RB      TCGA-HT-A614 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A74H 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A74J      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65S      TCGA-QH-A65V 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX      TCGA-QH-A6CY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-R8-A6YH      TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-S9-A6TS      TCGA-S9-A6TU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6U0 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6U1      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U9 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7IS      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7QX      TCGA-S9-A7QZ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7R1      TCGA-S9-A7R4      TCGA-S9-A7R8      TCGA-TM-A7C5 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RK      TCGA-TQ-A7RN      TCGA-TQ-A7RQ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CH 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-W9-A837 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACADS MUTATED        0      1      1
  ACADS WILD-TYPE    205    219    147
D50V8, multiclass
[1] "Remove cluster labels:" "ACADS MUTATED"         
clus
  ACADS MUTATED ACADS WILD-TYPE 
              2             571 
     TCGA-02-0003      TCGA-02-2470      TCGA-02-2485      TCGA-06-0126 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0128      TCGA-06-0129      TCGA-06-0130      TCGA-06-0154 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0155      TCGA-06-0189      TCGA-06-0238      TCGA-06-0644 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0650      TCGA-06-0875      TCGA-06-0876      TCGA-06-0877 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0879      TCGA-06-0882      TCGA-06-0939 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-1804      TCGA-06-1806      TCGA-06-2557      TCGA-06-2558 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-2559      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2570      TCGA-06-5408 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-12-0692      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5301 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0862      TCGA-14-0871      TCGA-14-1823 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-16-0846      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2625      TCGA-19-2631      TCGA-19-4068 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-19-5953      TCGA-19-5954      TCGA-19-5955      TCGA-19-5958 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-19-5959      TCGA-19-5960      TCGA-26-1442      TCGA-26-5132 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-6173      TCGA-26-6174 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1836      TCGA-27-2518      TCGA-27-2528 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2501      TCGA-28-5208 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-28-5214      TCGA-32-1970      TCGA-32-1982      TCGA-32-1986 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-32-1991      TCGA-32-4210      TCGA-32-4211      TCGA-32-5222 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-41-6646 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-74-6573      TCGA-74-6575      TCGA-74-6577      TCGA-74-6578 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-74-6584      TCGA-76-4926      TCGA-76-4927      TCGA-76-4928 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-76-4929      TCGA-76-4931      TCGA-76-4932      TCGA-76-6192 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6656 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-CS-4938 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-4942      TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-5393      TCGA-CS-5394      TCGA-CS-5396      TCGA-CS-5397 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6665      TCGA-CS-6666 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5280 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M      TCGA-DB-A75O 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A66B      TCGA-DH-A66D 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7US      TCGA-DU-5847 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7011      TCGA-DU-7012      TCGA-DU-7013 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7014      TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7TA      TCGA-DU-A7TB 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YQ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z6      TCGA-EZ-7264 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-7634      TCGA-FG-7636 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60L      TCGA-FG-A6IZ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-HT-7467 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8564      TCGA-HT-A4DV      TCGA-HT-A5R5 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RB      TCGA-HT-A614 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A74H 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A74J      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65S      TCGA-QH-A65V 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX      TCGA-QH-A6CY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-R8-A6YH      TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-S9-A6TS      TCGA-S9-A6TU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6U0 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6U1      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U9 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7IS      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7QX      TCGA-S9-A7QZ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7R1      TCGA-S9-A7R4      TCGA-S9-A7R8      TCGA-TM-A7C5 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RK      TCGA-TQ-A7RN      TCGA-TQ-A7RQ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CH 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-W9-A837 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACADS MUTATED        2      0      0
  ACADS WILD-TYPE    236    191    228
D50V9, multiclass
[1] "Remove cluster labels:" "ACADS MUTATED"         
clus
  ACADS MUTATED ACADS WILD-TYPE 
              2             655 
     TCGA-02-0047      TCGA-02-0055      TCGA-02-2483      TCGA-02-2485 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-02-2486      TCGA-06-0129      TCGA-06-0130      TCGA-06-0132 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0157      TCGA-06-0158      TCGA-06-0168 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0174      TCGA-06-0178      TCGA-06-0184      TCGA-06-0219 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0238      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0649      TCGA-06-0686      TCGA-06-0743      TCGA-06-0744 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0745      TCGA-06-0747      TCGA-06-0749      TCGA-06-0750 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0882      TCGA-06-1804      TCGA-06-2557 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-08-0386      TCGA-12-0616 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0821      TCGA-12-1597 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-12-5299      TCGA-14-0781      TCGA-14-0787      TCGA-14-0789 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0817      TCGA-14-1823      TCGA-14-1825 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-15-0742      TCGA-15-1444 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-16-0846      TCGA-16-1045      TCGA-19-1390      TCGA-19-2619 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1834 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1837      TCGA-27-2519      TCGA-27-2521 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2528 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2499      TCGA-28-2509 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-28-2510      TCGA-28-2513      TCGA-28-2514      TCGA-28-5204 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5213 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5220 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1980      TCGA-32-1982      TCGA-32-2615 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4213 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-3915 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-76-4932      TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-5394      TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6666      TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6670      TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5275      TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5279      TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XA      TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XE      TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64L      TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64R      TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64W      TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A75M      TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7011      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A74J      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6      TCGA-P5-A72U 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A736 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX      TCGA-QH-A6CY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACADS MUTATED        2      0      0
  ACADS WILD-TYPE    194    191    270
D50V10, multiclass
[1] "Remove cluster labels:" "ACADS MUTATED"         
clus
  ACADS MUTATED ACADS WILD-TYPE 
              2             655 
     TCGA-02-0047      TCGA-02-0055      TCGA-02-2483      TCGA-02-2485 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-02-2486      TCGA-06-0129      TCGA-06-0130      TCGA-06-0132 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0157      TCGA-06-0158      TCGA-06-0168 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0174      TCGA-06-0178      TCGA-06-0184      TCGA-06-0219 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0238      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0649      TCGA-06-0686      TCGA-06-0743      TCGA-06-0744 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0745      TCGA-06-0747      TCGA-06-0749      TCGA-06-0750 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0882      TCGA-06-1804      TCGA-06-2557 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-08-0386      TCGA-12-0616 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0821      TCGA-12-1597 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-12-5299      TCGA-14-0781      TCGA-14-0787      TCGA-14-0789 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0817      TCGA-14-1823      TCGA-14-1825 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-15-0742      TCGA-15-1444 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-16-0846      TCGA-16-1045      TCGA-19-1390      TCGA-19-2619 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1834 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1837      TCGA-27-2519      TCGA-27-2521 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2528 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2499      TCGA-28-2509 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-28-2510      TCGA-28-2513      TCGA-28-2514      TCGA-28-5204 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5213 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5220 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1980      TCGA-32-1982      TCGA-32-2615 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4213 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-3915 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-76-4932      TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-5394      TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6666      TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6670      TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5275      TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5279      TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XA      TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XE      TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64L      TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64R      TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64W      TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A75M      TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7011      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A74J      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6      TCGA-P5-A72U 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A736 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX      TCGA-QH-A6CY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACADS MUTATED        1      1      0      0
  ACADS WILD-TYPE    139    106     83    182
D50V11, multiclass
[1] "Remove cluster labels:" "ACADS MUTATED"         
clus
  ACADS MUTATED ACADS WILD-TYPE 
              2             510 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7014      TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8111      TCGA-HT-8113 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A5R9      TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6      TCGA-P5-A72U 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A736 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY      TCGA-QH-A6CZ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X      TCGA-RY-A83Y 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843      TCGA-RY-A845 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU      TCGA-S9-A6TV 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6TZ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2      TCGA-S9-A6U5 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9      TCGA-S9-A6UA 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4      TCGA-TM-A7C5 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B      TCGA-TM-A84C 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H      TCGA-TM-A84I 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M      TCGA-TM-A84O 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TM-A84T 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH      TCGA-TQ-A7RI 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM      TCGA-TQ-A7RN 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ      TCGA-TQ-A7RR 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CF 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K      TCGA-WY-A858 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B      TCGA-WY-A85C 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A85D      TCGA-WY-A85E 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACADS MUTATED        0      0      2
  ACADS WILD-TYPE    223    186    101
D50V12, multiclass
[1] "Remove cluster labels:" "ACADS MUTATED"         
clus
  ACADS MUTATED ACADS WILD-TYPE 
              2             510 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7014      TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8111      TCGA-HT-8113 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A5R9      TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6      TCGA-P5-A72U 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A736 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY      TCGA-QH-A6CZ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X      TCGA-RY-A83Y 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843      TCGA-RY-A845 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU      TCGA-S9-A6TV 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6TZ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2      TCGA-S9-A6U5 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9      TCGA-S9-A6UA 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4      TCGA-TM-A7C5 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B      TCGA-TM-A84C 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H      TCGA-TM-A84I 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M      TCGA-TM-A84O 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TM-A84T 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH      TCGA-TQ-A7RI 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM      TCGA-TQ-A7RN 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ      TCGA-TQ-A7RR 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CF 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K      TCGA-WY-A858 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B      TCGA-WY-A85C 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A85D      TCGA-WY-A85E 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACADS MUTATED        1      1      0      0
  ACADS WILD-TYPE    126    118    106    156
D50V13, multiclass
[1] "Remove cluster labels:" "ACADS MUTATED"         
clus
  ACADS MUTATED ACADS WILD-TYPE 
              2             506 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6UA 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4      TCGA-TM-A7C5 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B      TCGA-TM-A84C 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H      TCGA-TM-A84I 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M      TCGA-TM-A84O 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TM-A84T 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH      TCGA-TQ-A7RI 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM      TCGA-TQ-A7RN 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ      TCGA-TQ-A7RR 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CF 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K      TCGA-WY-A858 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B      TCGA-WY-A85C 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A85D      TCGA-WY-A85E 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  ACADS MUTATED        0      0      0      0      2      0
  ACADS WILD-TYPE     99     77    120     57     61     92
D50V14, multiclass
[1] "Remove cluster labels:" "ACADS MUTATED"         
clus
  ACADS MUTATED ACADS WILD-TYPE 
              2             506 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6UA 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4      TCGA-TM-A7C5 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B      TCGA-TM-A84C 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H      TCGA-TM-A84I 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M      TCGA-TM-A84O 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TM-A84T 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH      TCGA-TQ-A7RI 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM      TCGA-TQ-A7RN 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ      TCGA-TQ-A7RR 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CF 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K      TCGA-WY-A858 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B      TCGA-WY-A85C 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" "ACADS WILD-TYPE" 
     TCGA-WY-A85D      TCGA-WY-A85E 
"ACADS WILD-TYPE" "ACADS WILD-TYPE" 

Clustering(51) Variable = TNRC18 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNRC18 MUTATED        0      0      0      2
  TNRC18 WILD-TYPE     78     41     64     55
D51V1, multiclass
[1] "Remove cluster labels:" "TNRC18 MUTATED"        
clus
  TNRC18 MUTATED TNRC18 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-27-1830 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2501       TCGA-28-2502 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-2509       TCGA-28-2510       TCGA-28-2513       TCGA-28-2514 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5204       TCGA-28-5207       TCGA-28-5208       TCGA-28-5209 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNRC18 MUTATED        0      1      0      1
  TNRC18 WILD-TYPE     63     49     48     78
D51V2, multiclass
[1] "Remove cluster labels:" "TNRC18 MUTATED"        
clus
  TNRC18 MUTATED TNRC18 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-27-1830 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2501       TCGA-28-2502 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-2509       TCGA-28-2510       TCGA-28-2513       TCGA-28-2514 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5204       TCGA-28-5207       TCGA-28-5208       TCGA-28-5209 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNRC18 MUTATED        1      0      1      0
  TNRC18 WILD-TYPE     69     98     43     63
D51V3, multiclass
[1] "Remove cluster labels:" "TNRC18 MUTATED"        
clus
  TNRC18 MUTATED TNRC18 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-1806 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-26-6173 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-26-6174       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5211       TCGA-28-5213       TCGA-28-5214 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-87-5896 
"TNRC18 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNRC18 MUTATED        1      0      1
  TNRC18 WILD-TYPE    137     61     75
D51V4, multiclass
[1] "Remove cluster labels:" "TNRC18 MUTATED"        
clus
  TNRC18 MUTATED TNRC18 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-1806 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-26-6173 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-26-6174       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5211       TCGA-28-5213       TCGA-28-5214 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" "TNRC18 WILD-TYPE" 
      TCGA-87-5896 
"TNRC18 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNRC18 MUTATED        3      9      0
  TNRC18 WILD-TYPE    289    423     62
D51V5, multiclass
        clus
vv       TNRC18 MUTATED TNRC18 WILD-TYPE
  CLUS_1              3              289
  CLUS_2              9              423
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNRC18 MUTATED        2      6      2      1
  TNRC18 WILD-TYPE    151    217     86    160
D51V6, multiclass
        clus
vv       TNRC18 MUTATED TNRC18 WILD-TYPE
  CLUS_1              2              151
  CLUS_2              6              217
  CLUS_3              2               86
  CLUS_4              1              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNRC18 MUTATED        3      4      2      0
  TNRC18 WILD-TYPE    182    151    136     95
D51V7, multiclass
        clus
vv       TNRC18 MUTATED TNRC18 WILD-TYPE
  CLUS_1              3              182
  CLUS_2              4              151
  CLUS_3              2              136
  CLUS_4              0               95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNRC18 MUTATED        4      2      3
  TNRC18 WILD-TYPE    201    218    145
D51V8, multiclass
        clus
vv       TNRC18 MUTATED TNRC18 WILD-TYPE
  CLUS_1              4              201
  CLUS_2              2              218
  CLUS_3              3              145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNRC18 MUTATED        3      6      3
  TNRC18 WILD-TYPE    235    185    225
D51V9, multiclass
        clus
vv       TNRC18 MUTATED TNRC18 WILD-TYPE
  CLUS_1              3              235
  CLUS_2              6              185
  CLUS_3              3              225
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNRC18 MUTATED        2      4      6
  TNRC18 WILD-TYPE    194    187    264
D51V10, multiclass
        clus
vv       TNRC18 MUTATED TNRC18 WILD-TYPE
  CLUS_1              2              194
  CLUS_2              4              187
  CLUS_3              6              264
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNRC18 MUTATED        4      2      0      4
  TNRC18 WILD-TYPE    136    105     83    178
D51V11, multiclass
        clus
vv       TNRC18 MUTATED TNRC18 WILD-TYPE
  CLUS_1              4              136
  CLUS_2              2              105
  CLUS_3              0               83
  CLUS_4              4              178
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNRC18 MUTATED        3      4      3
  TNRC18 WILD-TYPE    220    182    100
D51V12, multiclass
        clus
vv       TNRC18 MUTATED TNRC18 WILD-TYPE
  CLUS_1              3              220
  CLUS_2              4              182
  CLUS_3              3              100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNRC18 MUTATED        4      2      0      3
  TNRC18 WILD-TYPE    123    117    106    153
D51V13, multiclass
        clus
vv       TNRC18 MUTATED TNRC18 WILD-TYPE
  CLUS_1              4              123
  CLUS_2              2              117
  CLUS_3              0              106
  CLUS_4              3              153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  TNRC18 MUTATED        1      1      4      0      1      2
  TNRC18 WILD-TYPE     98     76    116     57     62     90
D51V14, multiclass
        clus
vv       TNRC18 MUTATED TNRC18 WILD-TYPE
  CLUS_1              1               98
  CLUS_2              1               76
  CLUS_3              4              116
  CLUS_4              0               57
  CLUS_5              1               62
  CLUS_6              2               90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(52) Variable = SLC6A3 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A3 MUTATED        0      1      1      1
  SLC6A3 WILD-TYPE     78     40     63     56
D52V1, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              0               78
  CLUS_2              1               40
  CLUS_3              1               63
  CLUS_4              1               56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A3 MUTATED        0      1      1      1
  SLC6A3 WILD-TYPE     63     49     47     78
D52V2, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              0               63
  CLUS_2              1               49
  CLUS_3              1               47
  CLUS_4              1               78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A3 MUTATED        0      2      1      0
  SLC6A3 WILD-TYPE     70     96     43     63
D52V3, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              0               70
  CLUS_2              2               96
  CLUS_3              1               43
  CLUS_4              0               63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC6A3 MUTATED        2      0      1
  SLC6A3 WILD-TYPE    136     61     75
D52V4, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              2              136
  CLUS_2              0               61
  CLUS_3              1               75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC6A3 MUTATED        3      7      2
  SLC6A3 WILD-TYPE    289    425     60
D52V5, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              3              289
  CLUS_2              7              425
  CLUS_3              2               60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A3 MUTATED        3      4      0      3
  SLC6A3 WILD-TYPE    150    219     88    158
D52V6, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              3              150
  CLUS_2              4              219
  CLUS_3              0               88
  CLUS_4              3              158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A3 MUTATED        6      1      1      0
  SLC6A3 WILD-TYPE    179    154    137     95
D52V7, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              6              179
  CLUS_2              1              154
  CLUS_3              1              137
  CLUS_4              0               95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC6A3 MUTATED        6      2      0
  SLC6A3 WILD-TYPE    199    218    148
D52V8, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              6              199
  CLUS_2              2              218
  CLUS_3              0              148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC6A3 MUTATED        3      3      4
  SLC6A3 WILD-TYPE    235    188    224
D52V9, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              3              235
  CLUS_2              3              188
  CLUS_3              4              224
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC6A3 MUTATED        2      4      4
  SLC6A3 WILD-TYPE    194    187    266
D52V10, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              2              194
  CLUS_2              4              187
  CLUS_3              4              266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A3 MUTATED        2      4      2      1
  SLC6A3 WILD-TYPE    138    103     81    181
D52V11, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              2              138
  CLUS_2              4              103
  CLUS_3              2               81
  CLUS_4              1              181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC6A3 MUTATED        4      2      3
  SLC6A3 WILD-TYPE    219    184    100
D52V12, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              4              219
  CLUS_2              2              184
  CLUS_3              3              100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A3 MUTATED        2      1      2      4
  SLC6A3 WILD-TYPE    125    118    104    152
D52V13, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              2              125
  CLUS_2              1              118
  CLUS_3              2              104
  CLUS_4              4              152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  SLC6A3 MUTATED        3      0      1      0      1      4
  SLC6A3 WILD-TYPE     96     77    119     57     62     88
D52V14, multiclass
        clus
vv       SLC6A3 MUTATED SLC6A3 WILD-TYPE
  CLUS_1              3               96
  CLUS_2              0               77
  CLUS_3              1              119
  CLUS_4              0               57
  CLUS_5              1               62
  CLUS_6              4               88
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(53) Variable = ZNF292 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF292 MUTATED        0      0      2      1
  ZNF292 WILD-TYPE     78     41     62     56
D53V1, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              0               78
  CLUS_2              0               41
  CLUS_3              2               62
  CLUS_4              1               56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF292 MUTATED        0      0      2      1
  ZNF292 WILD-TYPE     63     50     46     78
D53V2, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              0               63
  CLUS_2              0               50
  CLUS_3              2               46
  CLUS_4              1               78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF292 MUTATED        0      2      1      0
  ZNF292 WILD-TYPE     70     96     43     63
D53V3, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              0               70
  CLUS_2              2               96
  CLUS_3              1               43
  CLUS_4              0               63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF292 MUTATED        1      0      2
  ZNF292 WILD-TYPE    137     61     74
D53V4, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              1              137
  CLUS_2              0               61
  CLUS_3              2               74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF292 MUTATED        4     13      0
  ZNF292 WILD-TYPE    288    419     62
D53V5, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              4              288
  CLUS_2             13              419
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF292 MUTATED        2      4      1      8
  ZNF292 WILD-TYPE    151    219     87    153
D53V6, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              2              151
  CLUS_2              4              219
  CLUS_3              1               87
  CLUS_4              8              153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF292 MUTATED        4      7      3      1
  ZNF292 WILD-TYPE    181    148    135     94
D53V7, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              4              181
  CLUS_2              7              148
  CLUS_3              3              135
  CLUS_4              1               94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF292 MUTATED        5      5      5
  ZNF292 WILD-TYPE    200    215    143
D53V8, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              5              200
  CLUS_2              5              215
  CLUS_3              5              143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF292 MUTATED        3      8      4
  ZNF292 WILD-TYPE    235    183    224
D53V9, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              3              235
  CLUS_2              8              183
  CLUS_3              4              224
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF292 MUTATED        1      5      9
  ZNF292 WILD-TYPE    195    186    261
D53V10, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              1              195
  CLUS_2              5              186
  CLUS_3              9              261
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF292 MUTATED        2      3      1      8
  ZNF292 WILD-TYPE    138    104     82    174
D53V11, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              2              138
  CLUS_2              3              104
  CLUS_3              1               82
  CLUS_4              8              174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF292 MUTATED        4      8      2
  ZNF292 WILD-TYPE    219    178    101
D53V12, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              4              219
  CLUS_2              8              178
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF292 MUTATED        1      2      3      8
  ZNF292 WILD-TYPE    126    117    103    148
D53V13, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              1              126
  CLUS_2              2              117
  CLUS_3              3              103
  CLUS_4              8              148
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  ZNF292 MUTATED        0      2      5      1      0      6
  ZNF292 WILD-TYPE     99     75    115     56     63     86
D53V14, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              0               99
  CLUS_2              2               75
  CLUS_3              5              115
  CLUS_4              1               56
  CLUS_5              0               63
  CLUS_6              6               86
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(54) Variable = ARID2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID2 MUTATED        1      0      0      1
  ARID2 WILD-TYPE     77     41     64     56
D54V1, multiclass
[1] "Remove cluster labels:" "ARID2 MUTATED"         
clus
  ARID2 MUTATED ARID2 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1979      TCGA-32-1980 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID2 MUTATED        1      1      0      0
  ARID2 WILD-TYPE     62     49     48     79
D54V2, multiclass
[1] "Remove cluster labels:" "ARID2 MUTATED"         
clus
  ARID2 MUTATED ARID2 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1979      TCGA-32-1980 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID2 MUTATED        0      1      0      1
  ARID2 WILD-TYPE     70     97     44     62
D54V3, multiclass
[1] "Remove cluster labels:" "ARID2 MUTATED"         
clus
  ARID2 MUTATED ARID2 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-87-5896 
"ARID2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ARID2 MUTATED        0      1      1
  ARID2 WILD-TYPE    138     60     75
D54V4, multiclass
[1] "Remove cluster labels:" "ARID2 MUTATED"         
clus
  ARID2 MUTATED ARID2 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" "ARID2 WILD-TYPE" 
     TCGA-87-5896 
"ARID2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ARID2 MUTATED        4      9      0
  ARID2 WILD-TYPE    288    423     62
D54V5, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             4             288
  CLUS_2             9             423
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID2 MUTATED        2      5      2      2
  ARID2 WILD-TYPE    151    218     86    159
D54V6, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             2             151
  CLUS_2             5             218
  CLUS_3             2              86
  CLUS_4             2             159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID2 MUTATED        2      2      3      1
  ARID2 WILD-TYPE    183    153    135     94
D54V7, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             2             183
  CLUS_2             2             153
  CLUS_3             3             135
  CLUS_4             1              94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ARID2 MUTATED        4      3      1
  ARID2 WILD-TYPE    201    217    147
D54V8, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             4             201
  CLUS_2             3             217
  CLUS_3             1             147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ARID2 MUTATED        4      4      4
  ARID2 WILD-TYPE    234    187    224
D54V9, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             4             234
  CLUS_2             4             187
  CLUS_3             4             224
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ARID2 MUTATED        1      6      5
  ARID2 WILD-TYPE    195    185    265
D54V10, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             1             195
  CLUS_2             6             185
  CLUS_3             5             265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID2 MUTATED        2      4      1      3
  ARID2 WILD-TYPE    138    103     82    179
D54V11, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             2             138
  CLUS_2             4             103
  CLUS_3             1              82
  CLUS_4             3             179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ARID2 MUTATED        3      3      4
  ARID2 WILD-TYPE    220    183     99
D54V12, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             3             220
  CLUS_2             3             183
  CLUS_3             4              99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID2 MUTATED        2      3      1      4
  ARID2 WILD-TYPE    125    116    105    152
D54V13, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             2             125
  CLUS_2             3             116
  CLUS_3             1             105
  CLUS_4             4             152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  ARID2 MUTATED        1      1      3      1      1      3
  ARID2 WILD-TYPE     98     76    117     56     62     89
D54V14, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             1              98
  CLUS_2             1              76
  CLUS_3             3             117
  CLUS_4             1              56
  CLUS_5             1              62
  CLUS_6             3              89
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(55) Variable = KRTAP5-3 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRTAP5-3 MUTATED        1      0      0      0
  KRTAP5-3 WILD-TYPE     77     41     64     57
D55V1, multiclass
[1] "Remove cluster labels:" "KRTAP5-3 MUTATED"      
clus
  KRTAP5-3 MUTATED KRTAP5-3 WILD-TYPE 
                 1                239 
        TCGA-02-0003         TCGA-02-0033         TCGA-02-0047 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-02-2470         TCGA-02-2483         TCGA-02-2485 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-02-2486         TCGA-06-0122         TCGA-06-0124 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0126         TCGA-06-0128         TCGA-06-0129 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0130         TCGA-06-0132         TCGA-06-0137 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0139         TCGA-06-0140         TCGA-06-0141 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0142         TCGA-06-0145         TCGA-06-0152 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0154         TCGA-06-0155         TCGA-06-0157 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0158         TCGA-06-0166         TCGA-06-0167 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0168         TCGA-06-0169         TCGA-06-0173 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0174         TCGA-06-0178         TCGA-06-0184 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0185         TCGA-06-0188         TCGA-06-0189 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0192         TCGA-06-0195         TCGA-06-0213 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0214         TCGA-06-0216         TCGA-06-0219 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0237         TCGA-06-0238         TCGA-06-0240 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0241         TCGA-06-0644         TCGA-06-0645 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0646         TCGA-06-0648         TCGA-06-0649 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0650         TCGA-06-0686         TCGA-06-0743 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0744         TCGA-06-0745         TCGA-06-0747 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0749         TCGA-06-0750         TCGA-06-0875 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0876         TCGA-06-0877         TCGA-06-0878 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0879         TCGA-06-0881         TCGA-06-0882 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0939         TCGA-06-1804         TCGA-06-2557 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-2558         TCGA-06-2559         TCGA-06-2561 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-2562         TCGA-06-2563         TCGA-06-2564 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-2565         TCGA-06-2567         TCGA-06-2569 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-2570         TCGA-06-5408         TCGA-06-5410 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-5411         TCGA-06-5412         TCGA-06-5413 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-5414         TCGA-06-5415         TCGA-06-5417 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-5418         TCGA-06-5856         TCGA-06-5858 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-5859         TCGA-06-6389         TCGA-06-6390 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-6391         TCGA-08-0386         TCGA-12-0616 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-12-0618         TCGA-12-0619         TCGA-12-0688 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-12-0692         TCGA-12-0821         TCGA-12-1597 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-12-3649         TCGA-12-3650         TCGA-12-3652 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-12-3653         TCGA-12-5299         TCGA-12-5301 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-14-0781         TCGA-14-0786         TCGA-14-0787 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-14-0789         TCGA-14-0790         TCGA-14-0813 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-14-0817         TCGA-14-0871         TCGA-14-1456 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-14-1823         TCGA-14-1825         TCGA-14-1829 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-14-2554         TCGA-14-3476         TCGA-14-4157 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-15-0742         TCGA-15-1444         TCGA-16-0846 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-16-0861         TCGA-16-1045         TCGA-16-1048 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-1390         TCGA-19-1790         TCGA-19-2619 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-2620         TCGA-19-2623         TCGA-19-2624 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-2625         TCGA-19-2629         TCGA-19-2631 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-4068         TCGA-19-5947         TCGA-19-5950 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-5951         TCGA-19-5952         TCGA-19-5954 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-5955         TCGA-19-5958         TCGA-19-5959 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-5960         TCGA-26-1439         TCGA-26-1442 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-26-5132         TCGA-26-5133         TCGA-26-5134 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-26-5135         TCGA-26-5136         TCGA-26-5139 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-1830         TCGA-27-1831         TCGA-27-1832 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-1833         TCGA-27-1834         TCGA-27-1835 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-1836         TCGA-27-1837         TCGA-27-1838 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-2518         TCGA-27-2519         TCGA-27-2521 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-2523         TCGA-27-2524         TCGA-27-2526 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-2527         TCGA-27-2528         TCGA-28-1747 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-1753         TCGA-28-2501         TCGA-28-2502 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-2509         TCGA-28-2510         TCGA-28-2513 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-2514         TCGA-28-5204         TCGA-28-5207 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-5208         TCGA-28-5209         TCGA-28-5213 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-5214         TCGA-28-5215         TCGA-28-5216 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-5218         TCGA-28-5219         TCGA-28-5220 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-6450         TCGA-32-1970         TCGA-32-1977 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-1979         TCGA-32-1980         TCGA-32-1982 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-1986         TCGA-32-1991         TCGA-32-2491 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-2494         TCGA-32-2495         TCGA-32-2615 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-2632         TCGA-32-2634         TCGA-32-2638 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-4208         TCGA-32-4209         TCGA-32-4210 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-4211         TCGA-32-4213         TCGA-32-4719 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-5222         TCGA-41-2571         TCGA-41-2572 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-41-2573         TCGA-41-2575         TCGA-41-3392 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-41-3393         TCGA-41-3915         TCGA-41-4097 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-41-5651         TCGA-76-4925         TCGA-76-4926 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-4927         TCGA-76-4928         TCGA-76-4929 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-4931         TCGA-76-4932         TCGA-76-4934 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-4935         TCGA-76-6191         TCGA-76-6192 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-6193         TCGA-76-6282         TCGA-76-6285 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-81-5910         TCGA-87-5896 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRTAP5-3 MUTATED        0      0      1      0
  KRTAP5-3 WILD-TYPE     63     50     47     79
D55V2, multiclass
[1] "Remove cluster labels:" "KRTAP5-3 MUTATED"      
clus
  KRTAP5-3 MUTATED KRTAP5-3 WILD-TYPE 
                 1                239 
        TCGA-02-0003         TCGA-02-0033         TCGA-02-0047 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-02-2470         TCGA-02-2483         TCGA-02-2485 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-02-2486         TCGA-06-0122         TCGA-06-0124 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0126         TCGA-06-0128         TCGA-06-0129 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0130         TCGA-06-0132         TCGA-06-0137 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0139         TCGA-06-0140         TCGA-06-0141 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0142         TCGA-06-0145         TCGA-06-0152 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0154         TCGA-06-0155         TCGA-06-0157 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0158         TCGA-06-0166         TCGA-06-0167 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0168         TCGA-06-0169         TCGA-06-0173 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0174         TCGA-06-0178         TCGA-06-0184 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0185         TCGA-06-0188         TCGA-06-0189 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0192         TCGA-06-0195         TCGA-06-0213 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0214         TCGA-06-0216         TCGA-06-0219 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0237         TCGA-06-0238         TCGA-06-0240 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0241         TCGA-06-0644         TCGA-06-0645 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0646         TCGA-06-0648         TCGA-06-0649 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0650         TCGA-06-0686         TCGA-06-0743 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0744         TCGA-06-0745         TCGA-06-0747 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0749         TCGA-06-0750         TCGA-06-0875 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0876         TCGA-06-0877         TCGA-06-0878 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0879         TCGA-06-0881         TCGA-06-0882 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0939         TCGA-06-1804         TCGA-06-2557 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-2558         TCGA-06-2559         TCGA-06-2561 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-2562         TCGA-06-2563         TCGA-06-2564 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-2565         TCGA-06-2567         TCGA-06-2569 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-2570         TCGA-06-5408         TCGA-06-5410 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-5411         TCGA-06-5412         TCGA-06-5413 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-5414         TCGA-06-5415         TCGA-06-5417 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-5418         TCGA-06-5856         TCGA-06-5858 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-5859         TCGA-06-6389         TCGA-06-6390 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-6391         TCGA-08-0386         TCGA-12-0616 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-12-0618         TCGA-12-0619         TCGA-12-0688 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-12-0692         TCGA-12-0821         TCGA-12-1597 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-12-3649         TCGA-12-3650         TCGA-12-3652 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-12-3653         TCGA-12-5299         TCGA-12-5301 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-14-0781         TCGA-14-0786         TCGA-14-0787 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-14-0789         TCGA-14-0790         TCGA-14-0813 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-14-0817         TCGA-14-0871         TCGA-14-1456 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-14-1823         TCGA-14-1825         TCGA-14-1829 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-14-2554         TCGA-14-3476         TCGA-14-4157 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-15-0742         TCGA-15-1444         TCGA-16-0846 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-16-0861         TCGA-16-1045         TCGA-16-1048 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-1390         TCGA-19-1790         TCGA-19-2619 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-2620         TCGA-19-2623         TCGA-19-2624 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-2625         TCGA-19-2629         TCGA-19-2631 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-4068         TCGA-19-5947         TCGA-19-5950 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-5951         TCGA-19-5952         TCGA-19-5954 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-5955         TCGA-19-5958         TCGA-19-5959 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-5960         TCGA-26-1439         TCGA-26-1442 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-26-5132         TCGA-26-5133         TCGA-26-5134 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-26-5135         TCGA-26-5136         TCGA-26-5139 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-1830         TCGA-27-1831         TCGA-27-1832 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-1833         TCGA-27-1834         TCGA-27-1835 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-1836         TCGA-27-1837         TCGA-27-1838 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-2518         TCGA-27-2519         TCGA-27-2521 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-2523         TCGA-27-2524         TCGA-27-2526 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-2527         TCGA-27-2528         TCGA-28-1747 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-1753         TCGA-28-2501         TCGA-28-2502 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-2509         TCGA-28-2510         TCGA-28-2513 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-2514         TCGA-28-5204         TCGA-28-5207 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-5208         TCGA-28-5209         TCGA-28-5213 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-5214         TCGA-28-5215         TCGA-28-5216 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-5218         TCGA-28-5219         TCGA-28-5220 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-6450         TCGA-32-1970         TCGA-32-1977 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-1979         TCGA-32-1980         TCGA-32-1982 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-1986         TCGA-32-1991         TCGA-32-2491 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-2494         TCGA-32-2495         TCGA-32-2615 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-2632         TCGA-32-2634         TCGA-32-2638 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-4208         TCGA-32-4209         TCGA-32-4210 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-4211         TCGA-32-4213         TCGA-32-4719 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-5222         TCGA-41-2571         TCGA-41-2572 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-41-2573         TCGA-41-2575         TCGA-41-3392 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-41-3393         TCGA-41-3915         TCGA-41-4097 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-41-5651         TCGA-76-4925         TCGA-76-4926 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-4927         TCGA-76-4928         TCGA-76-4929 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-4931         TCGA-76-4932         TCGA-76-4934 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-4935         TCGA-76-6191         TCGA-76-6192 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-6193         TCGA-76-6282         TCGA-76-6285 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-81-5910         TCGA-87-5896 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRTAP5-3 MUTATED        1      0      0      0
  KRTAP5-3 WILD-TYPE     69     98     44     63
D55V3, multiclass
[1] "Remove cluster labels:" "KRTAP5-3 MUTATED"      
clus
  KRTAP5-3 MUTATED KRTAP5-3 WILD-TYPE 
                 1                274 
        TCGA-02-0003         TCGA-02-0033         TCGA-02-0047 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-02-0055         TCGA-02-2470         TCGA-02-2483 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-02-2485         TCGA-02-2486         TCGA-06-0122 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0124         TCGA-06-0126         TCGA-06-0128 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0129         TCGA-06-0130         TCGA-06-0137 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0139         TCGA-06-0140         TCGA-06-0141 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0142         TCGA-06-0145         TCGA-06-0151 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0152         TCGA-06-0154         TCGA-06-0155 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0157         TCGA-06-0158         TCGA-06-0166 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0168         TCGA-06-0169         TCGA-06-0173 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0174         TCGA-06-0178         TCGA-06-0184 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0185         TCGA-06-0188         TCGA-06-0189 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0192         TCGA-06-0195         TCGA-06-0213 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0214         TCGA-06-0216         TCGA-06-0219 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0237         TCGA-06-0238         TCGA-06-0240 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0241         TCGA-06-0644         TCGA-06-0645 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0646         TCGA-06-0648         TCGA-06-0649 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0650         TCGA-06-0686         TCGA-06-0743 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0744         TCGA-06-0745         TCGA-06-0747 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0749         TCGA-06-0750         TCGA-06-0875 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0876         TCGA-06-0877         TCGA-06-0878 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0879         TCGA-06-0881         TCGA-06-0882 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0939         TCGA-06-1804         TCGA-06-1806 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-2557         TCGA-06-2558         TCGA-06-2559 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-2561         TCGA-06-2562         TCGA-06-2563 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-2564         TCGA-06-2565         TCGA-06-2567 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-2569         TCGA-06-2570         TCGA-06-5408 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-5410         TCGA-06-5411         TCGA-06-5412 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-5413         TCGA-06-5414         TCGA-06-5415 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-5417         TCGA-06-5418         TCGA-06-5856 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-5858         TCGA-06-5859         TCGA-06-6388 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-6389         TCGA-06-6390         TCGA-06-6391 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-6693         TCGA-06-6694         TCGA-06-6695 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-6697         TCGA-06-6698         TCGA-06-6699 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-6700         TCGA-06-6701         TCGA-08-0386 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-12-0616         TCGA-12-0618         TCGA-12-0619 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-12-0688         TCGA-12-0692         TCGA-12-0821 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-12-1597         TCGA-12-3649         TCGA-12-3650 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-12-3652         TCGA-12-3653         TCGA-12-5299 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-12-5301         TCGA-14-0740         TCGA-14-0781 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-14-0786         TCGA-14-0787         TCGA-14-0789 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-14-0790         TCGA-14-0813         TCGA-14-0817 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-14-0862         TCGA-14-0871         TCGA-14-1043 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-14-1395         TCGA-14-1450         TCGA-14-1456 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-14-1823         TCGA-14-1825         TCGA-14-1829 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-14-2554         TCGA-14-3476         TCGA-14-4157 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-15-0742         TCGA-15-1444         TCGA-16-0846 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-16-0861         TCGA-16-1045         TCGA-16-1048 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-1390         TCGA-19-1790         TCGA-19-2619 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-2620         TCGA-19-2623         TCGA-19-2624 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-2625         TCGA-19-2629         TCGA-19-2631 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-4068         TCGA-19-5947         TCGA-19-5950 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-5951         TCGA-19-5952         TCGA-19-5953 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-5954         TCGA-19-5955         TCGA-19-5958 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-5959         TCGA-19-5960         TCGA-26-1439 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-26-1442         TCGA-26-5132         TCGA-26-5133 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-26-5134         TCGA-26-5135         TCGA-26-5136 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-26-5139         TCGA-26-6173         TCGA-26-6174 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-1830         TCGA-27-1831         TCGA-27-1832 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-1833         TCGA-27-1834         TCGA-27-1835 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-1836         TCGA-27-1837         TCGA-27-1838 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-2518         TCGA-27-2519         TCGA-27-2521 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-2523         TCGA-27-2524         TCGA-27-2526 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-2527         TCGA-27-2528         TCGA-28-1747 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-1753         TCGA-28-2502         TCGA-28-2509 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-2510         TCGA-28-2513         TCGA-28-2514 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-5204         TCGA-28-5207         TCGA-28-5208 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-5209         TCGA-28-5211         TCGA-28-5213 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-5214         TCGA-28-5215         TCGA-28-5216 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-5218         TCGA-28-5219         TCGA-28-5220 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-6450         TCGA-32-1970         TCGA-32-1977 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-1979         TCGA-32-1980         TCGA-32-1982 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-1986         TCGA-32-1991         TCGA-32-2491 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-2494         TCGA-32-2495         TCGA-32-2615 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-2632         TCGA-32-2634         TCGA-32-2638 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-4208         TCGA-32-4209         TCGA-32-4210 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-4211         TCGA-32-4213         TCGA-32-4719 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-5222         TCGA-41-2571         TCGA-41-2572 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-41-2573         TCGA-41-2575         TCGA-41-3392 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-41-3393         TCGA-41-3915         TCGA-41-4097 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-41-5651         TCGA-41-6646         TCGA-74-6573 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-74-6575         TCGA-74-6577         TCGA-74-6578 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-74-6584         TCGA-76-4925         TCGA-76-4926 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-4927         TCGA-76-4928         TCGA-76-4929 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-4931         TCGA-76-4932         TCGA-76-4934 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-4935         TCGA-76-6191         TCGA-76-6192 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-6193         TCGA-76-6280         TCGA-76-6282 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-6283         TCGA-76-6285         TCGA-76-6286 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-6656         TCGA-76-6657         TCGA-76-6660 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-6661         TCGA-76-6662         TCGA-76-6663 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-6664         TCGA-81-5910         TCGA-81-5911 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-87-5896 
"KRTAP5-3 WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KRTAP5-3 MUTATED        0      1      0
  KRTAP5-3 WILD-TYPE    138     60     76
D55V4, multiclass
[1] "Remove cluster labels:" "KRTAP5-3 MUTATED"      
clus
  KRTAP5-3 MUTATED KRTAP5-3 WILD-TYPE 
                 1                274 
        TCGA-02-0003         TCGA-02-0033         TCGA-02-0047 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-02-0055         TCGA-02-2470         TCGA-02-2483 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-02-2485         TCGA-02-2486         TCGA-06-0122 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0124         TCGA-06-0126         TCGA-06-0128 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0129         TCGA-06-0130         TCGA-06-0137 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0139         TCGA-06-0140         TCGA-06-0141 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0142         TCGA-06-0145         TCGA-06-0151 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0152         TCGA-06-0154         TCGA-06-0155 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0157         TCGA-06-0158         TCGA-06-0166 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0168         TCGA-06-0169         TCGA-06-0173 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0174         TCGA-06-0178         TCGA-06-0184 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0185         TCGA-06-0188         TCGA-06-0189 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0192         TCGA-06-0195         TCGA-06-0213 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0214         TCGA-06-0216         TCGA-06-0219 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0237         TCGA-06-0238         TCGA-06-0240 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0241         TCGA-06-0644         TCGA-06-0645 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0646         TCGA-06-0648         TCGA-06-0649 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0650         TCGA-06-0686         TCGA-06-0743 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0744         TCGA-06-0745         TCGA-06-0747 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0749         TCGA-06-0750         TCGA-06-0875 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0876         TCGA-06-0877         TCGA-06-0878 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0879         TCGA-06-0881         TCGA-06-0882 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-0939         TCGA-06-1804         TCGA-06-1806 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-2557         TCGA-06-2558         TCGA-06-2559 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-2561         TCGA-06-2562         TCGA-06-2563 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-2564         TCGA-06-2565         TCGA-06-2567 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-2569         TCGA-06-2570         TCGA-06-5408 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-5410         TCGA-06-5411         TCGA-06-5412 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-5413         TCGA-06-5414         TCGA-06-5415 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-5417         TCGA-06-5418         TCGA-06-5856 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-5858         TCGA-06-5859         TCGA-06-6388 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-6389         TCGA-06-6390         TCGA-06-6391 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-6693         TCGA-06-6694         TCGA-06-6695 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-6697         TCGA-06-6698         TCGA-06-6699 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-06-6700         TCGA-06-6701         TCGA-08-0386 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-12-0616         TCGA-12-0618         TCGA-12-0619 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-12-0688         TCGA-12-0692         TCGA-12-0821 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-12-1597         TCGA-12-3649         TCGA-12-3650 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-12-3652         TCGA-12-3653         TCGA-12-5299 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-12-5301         TCGA-14-0740         TCGA-14-0781 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-14-0786         TCGA-14-0787         TCGA-14-0789 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-14-0790         TCGA-14-0813         TCGA-14-0817 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-14-0862         TCGA-14-0871         TCGA-14-1043 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-14-1395         TCGA-14-1450         TCGA-14-1456 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-14-1823         TCGA-14-1825         TCGA-14-1829 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-14-2554         TCGA-14-3476         TCGA-14-4157 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-15-0742         TCGA-15-1444         TCGA-16-0846 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-16-0861         TCGA-16-1045         TCGA-16-1048 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-1390         TCGA-19-1790         TCGA-19-2619 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-2620         TCGA-19-2623         TCGA-19-2624 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-2625         TCGA-19-2629         TCGA-19-2631 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-4068         TCGA-19-5947         TCGA-19-5950 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-5951         TCGA-19-5952         TCGA-19-5953 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-5954         TCGA-19-5955         TCGA-19-5958 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-19-5959         TCGA-19-5960         TCGA-26-1439 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-26-1442         TCGA-26-5132         TCGA-26-5133 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-26-5134         TCGA-26-5135         TCGA-26-5136 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-26-5139         TCGA-26-6173         TCGA-26-6174 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-1830         TCGA-27-1831         TCGA-27-1832 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-1833         TCGA-27-1834         TCGA-27-1835 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-1836         TCGA-27-1837         TCGA-27-1838 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-2518         TCGA-27-2519         TCGA-27-2521 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-2523         TCGA-27-2524         TCGA-27-2526 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-27-2527         TCGA-27-2528         TCGA-28-1747 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-1753         TCGA-28-2502         TCGA-28-2509 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-2510         TCGA-28-2513         TCGA-28-2514 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-5204         TCGA-28-5207         TCGA-28-5208 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-5209         TCGA-28-5211         TCGA-28-5213 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-5214         TCGA-28-5215         TCGA-28-5216 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-5218         TCGA-28-5219         TCGA-28-5220 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-28-6450         TCGA-32-1970         TCGA-32-1977 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-1979         TCGA-32-1980         TCGA-32-1982 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-1986         TCGA-32-1991         TCGA-32-2491 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-2494         TCGA-32-2495         TCGA-32-2615 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-2632         TCGA-32-2634         TCGA-32-2638 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-4208         TCGA-32-4209         TCGA-32-4210 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-4211         TCGA-32-4213         TCGA-32-4719 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-32-5222         TCGA-41-2571         TCGA-41-2572 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-41-2573         TCGA-41-2575         TCGA-41-3392 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-41-3393         TCGA-41-3915         TCGA-41-4097 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-41-5651         TCGA-41-6646         TCGA-74-6573 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-74-6575         TCGA-74-6577         TCGA-74-6578 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-74-6584         TCGA-76-4925         TCGA-76-4926 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-4927         TCGA-76-4928         TCGA-76-4929 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-4931         TCGA-76-4932         TCGA-76-4934 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-4935         TCGA-76-6191         TCGA-76-6192 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-6193         TCGA-76-6280         TCGA-76-6282 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-6283         TCGA-76-6285         TCGA-76-6286 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-6656         TCGA-76-6657         TCGA-76-6660 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-6661         TCGA-76-6662         TCGA-76-6663 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-76-6664         TCGA-81-5910         TCGA-81-5911 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-87-5896 
"KRTAP5-3 WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KRTAP5-3 MUTATED        2      2      0
  KRTAP5-3 WILD-TYPE    290    430     62
D55V5, multiclass
        clus
vv       KRTAP5-3 MUTATED KRTAP5-3 WILD-TYPE
  CLUS_1                2                290
  CLUS_2                2                430
  CLUS_3                0                 62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRTAP5-3 MUTATED        2      1      1      0
  KRTAP5-3 WILD-TYPE    151    222     87    161
D55V6, multiclass
        clus
vv       KRTAP5-3 MUTATED KRTAP5-3 WILD-TYPE
  CLUS_1                2                151
  CLUS_2                1                222
  CLUS_3                1                 87
  CLUS_4                0                161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRTAP5-3 MUTATED        1      0      1      2
  KRTAP5-3 WILD-TYPE    184    155    137     93
D55V7, multiclass
        clus
vv       KRTAP5-3 MUTATED KRTAP5-3 WILD-TYPE
  CLUS_1                1                184
  CLUS_2                0                155
  CLUS_3                1                137
  CLUS_4                2                 93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KRTAP5-3 MUTATED        2      1      1
  KRTAP5-3 WILD-TYPE    203    219    147
D55V8, multiclass
        clus
vv       KRTAP5-3 MUTATED KRTAP5-3 WILD-TYPE
  CLUS_1                2                203
  CLUS_2                1                219
  CLUS_3                1                147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KRTAP5-3 MUTATED        3      0      1
  KRTAP5-3 WILD-TYPE    235    191    227
D55V9, multiclass
        clus
vv       KRTAP5-3 MUTATED KRTAP5-3 WILD-TYPE
  CLUS_1                3                235
  CLUS_2                0                191
  CLUS_3                1                227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KRTAP5-3 MUTATED        3      1      0
  KRTAP5-3 WILD-TYPE    193    190    270
D55V10, multiclass
        clus
vv       KRTAP5-3 MUTATED KRTAP5-3 WILD-TYPE
  CLUS_1                3                193
  CLUS_2                1                190
  CLUS_3                0                270
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRTAP5-3 MUTATED        3      0      0      0
  KRTAP5-3 WILD-TYPE    137    107     83    182
D55V11, multiclass
        clus
vv       KRTAP5-3 MUTATED KRTAP5-3 WILD-TYPE
  CLUS_1                3                137
  CLUS_2                0                107
  CLUS_3                0                 83
  CLUS_4                0                182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KRTAP5-3 MUTATED        2      0      1
  KRTAP5-3 WILD-TYPE    221    186    102
D55V12, multiclass
        clus
vv       KRTAP5-3 MUTATED KRTAP5-3 WILD-TYPE
  CLUS_1                2                221
  CLUS_2                0                186
  CLUS_3                1                102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRTAP5-3 MUTATED        2      0      0      0
  KRTAP5-3 WILD-TYPE    125    119    106    156
D55V13, multiclass
[1] "Remove cluster labels:" "KRTAP5-3 MUTATED"      
clus
  KRTAP5-3 MUTATED KRTAP5-3 WILD-TYPE 
                 2                506 
        TCGA-CS-4938         TCGA-CS-4941         TCGA-CS-4942 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-CS-4943         TCGA-CS-4944         TCGA-CS-5390 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-CS-5393         TCGA-CS-5394         TCGA-CS-5395 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-CS-5396         TCGA-CS-5397         TCGA-CS-6186 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-CS-6188         TCGA-CS-6290         TCGA-CS-6665 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-CS-6666         TCGA-CS-6667         TCGA-CS-6668 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-CS-6669         TCGA-CS-6670         TCGA-DB-5270 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DB-5273         TCGA-DB-5274         TCGA-DB-5275 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DB-5276         TCGA-DB-5277         TCGA-DB-5278 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DB-5279         TCGA-DB-5281         TCGA-DB-A4X9 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DB-A4XA         TCGA-DB-A4XB         TCGA-DB-A4XC 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DB-A4XD         TCGA-DB-A4XE         TCGA-DB-A4XF 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DB-A4XG         TCGA-DB-A4XH         TCGA-DB-A64L 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DB-A64O         TCGA-DB-A64P         TCGA-DB-A64Q 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DB-A64R         TCGA-DB-A64S         TCGA-DB-A64U 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DB-A64V         TCGA-DB-A64W         TCGA-DB-A64X 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DB-A75K         TCGA-DB-A75L         TCGA-DB-A75O 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DB-A75P         TCGA-DH-5140         TCGA-DH-5141 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DH-5142         TCGA-DH-5143         TCGA-DH-5144 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DH-A669         TCGA-DH-A66B         TCGA-DH-A66D 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DH-A66F         TCGA-DH-A66G         TCGA-DH-A7UR 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DH-A7US         TCGA-DH-A7UT         TCGA-DH-A7UU 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DH-A7UV         TCGA-DU-5847         TCGA-DU-5849 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-5851         TCGA-DU-5852         TCGA-DU-5853 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-5854         TCGA-DU-5855         TCGA-DU-5870 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-5871         TCGA-DU-5872         TCGA-DU-5874 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-6392         TCGA-DU-6393         TCGA-DU-6394 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-6395         TCGA-DU-6396         TCGA-DU-6397 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-6399         TCGA-DU-6400         TCGA-DU-6401 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-6402         TCGA-DU-6403         TCGA-DU-6404 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-6405         TCGA-DU-6406         TCGA-DU-6407 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-6408         TCGA-DU-6410         TCGA-DU-6542 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-7006         TCGA-DU-7007         TCGA-DU-7008 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-7009         TCGA-DU-7010         TCGA-DU-7013 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-7014         TCGA-DU-7015         TCGA-DU-7018 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-7019         TCGA-DU-7290         TCGA-DU-7292 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-7294         TCGA-DU-7298         TCGA-DU-7299 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-7300         TCGA-DU-7301         TCGA-DU-7302 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-7304         TCGA-DU-7306         TCGA-DU-7309 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-8158         TCGA-DU-8161         TCGA-DU-8162 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-8163         TCGA-DU-8164         TCGA-DU-8165 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-8166         TCGA-DU-8167         TCGA-DU-8168 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-A5TP         TCGA-DU-A5TR         TCGA-DU-A5TS 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-A5TT         TCGA-DU-A5TU         TCGA-DU-A5TW 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-A5TY         TCGA-DU-A6S2         TCGA-DU-A6S3 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-A6S6         TCGA-DU-A6S7         TCGA-DU-A6S8 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-A76K         TCGA-DU-A76L         TCGA-DU-A76O 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-A76R         TCGA-DU-A7T6         TCGA-DU-A7T8 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-A7TA         TCGA-DU-A7TB         TCGA-DU-A7TC 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-A7TD         TCGA-DU-A7TG         TCGA-DU-A7TI 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-A7TJ         TCGA-E1-5302         TCGA-E1-5303 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-E1-5304         TCGA-E1-5305         TCGA-E1-5307 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-E1-5311         TCGA-E1-5318         TCGA-E1-5319 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-E1-5322         TCGA-E1-A7YD         TCGA-E1-A7YE 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-E1-A7YH         TCGA-E1-A7YI         TCGA-E1-A7YJ 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-E1-A7YK         TCGA-E1-A7YL         TCGA-E1-A7YM 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-E1-A7YN         TCGA-E1-A7YO         TCGA-E1-A7YQ 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-E1-A7YS         TCGA-E1-A7YU         TCGA-E1-A7YV 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-E1-A7YW         TCGA-E1-A7YY         TCGA-E1-A7Z2 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-E1-A7Z3         TCGA-E1-A7Z4         TCGA-E1-A7Z6 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-EZ-7264         TCGA-F6-A8O3         TCGA-F6-A8O4 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-5962         TCGA-FG-5963         TCGA-FG-5964 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-5965         TCGA-FG-6688         TCGA-FG-6689 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-6690         TCGA-FG-6691         TCGA-FG-6692 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-7634         TCGA-FG-7636         TCGA-FG-7637 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-7638         TCGA-FG-7641         TCGA-FG-7643 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-8181         TCGA-FG-8182         TCGA-FG-8185 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-8186         TCGA-FG-8187         TCGA-FG-8189 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-8191         TCGA-FG-A4MT         TCGA-FG-A4MU 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-A4MW         TCGA-FG-A4MX         TCGA-FG-A4MY 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-A60J         TCGA-FG-A60K         TCGA-FG-A60L 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-A6IZ         TCGA-FG-A6J1         TCGA-FG-A6J3 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-A70Y         TCGA-FG-A70Z         TCGA-FG-A710 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-A711         TCGA-FG-A713         TCGA-FG-A87N 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-A87Q         TCGA-FN-7833         TCGA-HT-7467 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7468         TCGA-HT-7469         TCGA-HT-7470 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7471         TCGA-HT-7472         TCGA-HT-7473 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7474         TCGA-HT-7475         TCGA-HT-7476 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7477         TCGA-HT-7478         TCGA-HT-7479 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7480         TCGA-HT-7481         TCGA-HT-7482 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7483         TCGA-HT-7485         TCGA-HT-7601 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7602         TCGA-HT-7603         TCGA-HT-7604 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7605         TCGA-HT-7606         TCGA-HT-7607 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7608         TCGA-HT-7609         TCGA-HT-7610 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7611         TCGA-HT-7616         TCGA-HT-7620 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7676         TCGA-HT-7677         TCGA-HT-7680 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7681         TCGA-HT-7684         TCGA-HT-7686 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7687         TCGA-HT-7688         TCGA-HT-7689 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7690         TCGA-HT-7691         TCGA-HT-7692 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7693         TCGA-HT-7694         TCGA-HT-7695 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7854         TCGA-HT-7855         TCGA-HT-7856 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7857         TCGA-HT-7858         TCGA-HT-7860 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7873         TCGA-HT-7874         TCGA-HT-7875 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7877         TCGA-HT-7879         TCGA-HT-7880 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7881         TCGA-HT-7882         TCGA-HT-7884 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7902         TCGA-HT-8010         TCGA-HT-8011 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-8012         TCGA-HT-8013         TCGA-HT-8015 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-8018         TCGA-HT-8019         TCGA-HT-8104 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-8105         TCGA-HT-8106         TCGA-HT-8107 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-8108         TCGA-HT-8109         TCGA-HT-8110 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-8111         TCGA-HT-8113         TCGA-HT-8114 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-8558         TCGA-HT-8563         TCGA-HT-8564 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-A4DS         TCGA-HT-A4DV         TCGA-HT-A5R5 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-A5R7         TCGA-HT-A5R9         TCGA-HT-A5RA 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-A5RB         TCGA-HT-A5RC         TCGA-HT-A614 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-A615         TCGA-HT-A616         TCGA-HT-A617 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-A618         TCGA-HT-A619         TCGA-HT-A61A 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-A61B         TCGA-HT-A61C         TCGA-HT-A74H 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-A74K         TCGA-HT-A74L         TCGA-HT-A74O 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HW-7486         TCGA-HW-7487         TCGA-HW-7489 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HW-7490         TCGA-HW-7491         TCGA-HW-7493 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HW-7495         TCGA-HW-8319         TCGA-HW-8320 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HW-8321         TCGA-HW-8322         TCGA-HW-A5KJ 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HW-A5KK         TCGA-HW-A5KL         TCGA-HW-A5KM 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-IK-7675         TCGA-IK-8125         TCGA-KT-A74X 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-KT-A7W1         TCGA-P5-A5ET         TCGA-P5-A5EU 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-P5-A5EV         TCGA-P5-A5EW         TCGA-P5-A5EX 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-P5-A5EY         TCGA-P5-A5EZ         TCGA-P5-A5F0 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-P5-A5F1         TCGA-P5-A5F2         TCGA-P5-A5F4 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-P5-A72U         TCGA-P5-A72W         TCGA-P5-A72X 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-P5-A72Z         TCGA-P5-A730         TCGA-P5-A731 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-P5-A733         TCGA-P5-A735         TCGA-P5-A737 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-P5-A77W         TCGA-P5-A77X         TCGA-P5-A780 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-P5-A781         TCGA-QH-A65R         TCGA-QH-A65S 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-QH-A65V         TCGA-QH-A65X         TCGA-QH-A65Z 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-QH-A6CS         TCGA-QH-A6CU         TCGA-QH-A6CV 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-QH-A6CX         TCGA-QH-A6CY         TCGA-QH-A6CZ 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-QH-A6X3         TCGA-QH-A6X4         TCGA-QH-A6X5 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-QH-A6X8         TCGA-QH-A6X9         TCGA-QH-A6XA 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-QH-A6XC         TCGA-QH-A86X         TCGA-QH-A870 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-R8-A6MK         TCGA-R8-A6ML         TCGA-R8-A6MO 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-R8-A6YH         TCGA-R8-A73M         TCGA-RY-A83X 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-RY-A83Y         TCGA-RY-A83Z         TCGA-RY-A840 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-RY-A843         TCGA-RY-A845         TCGA-RY-A847 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A6TS         TCGA-S9-A6TU         TCGA-S9-A6TV 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A6TW         TCGA-S9-A6TX         TCGA-S9-A6TY 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A6TZ         TCGA-S9-A6U0         TCGA-S9-A6U1 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A6U2         TCGA-S9-A6U5         TCGA-S9-A6U6 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A6U8         TCGA-S9-A6UA         TCGA-S9-A6UB 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A6WD         TCGA-S9-A6WE         TCGA-S9-A6WG 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A6WH         TCGA-S9-A6WI         TCGA-S9-A6WL 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A6WM         TCGA-S9-A6WN         TCGA-S9-A6WO 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A6WP         TCGA-S9-A6WQ         TCGA-S9-A7IQ 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A7IS         TCGA-S9-A7IX         TCGA-S9-A7IY 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A7IZ         TCGA-S9-A7J0         TCGA-S9-A7J1 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A7J2         TCGA-S9-A7J3         TCGA-S9-A7QW 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A7QX         TCGA-S9-A7QY         TCGA-S9-A7QZ 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A7R1         TCGA-S9-A7R2         TCGA-S9-A7R3 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A7R4         TCGA-S9-A7R7         TCGA-S9-A7R8 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A89V         TCGA-S9-A89Z         TCGA-TM-A7C3 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TM-A7C4         TCGA-TM-A7C5         TCGA-TM-A7CA 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TM-A7CF         TCGA-TM-A84B         TCGA-TM-A84C 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TM-A84F         TCGA-TM-A84G         TCGA-TM-A84H 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TM-A84I         TCGA-TM-A84J         TCGA-TM-A84L 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TM-A84M         TCGA-TM-A84O         TCGA-TM-A84Q 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TM-A84R         TCGA-TM-A84S         TCGA-TM-A84T 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TQ-A7RF         TCGA-TQ-A7RG         TCGA-TQ-A7RH 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TQ-A7RI         TCGA-TQ-A7RJ         TCGA-TQ-A7RK 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TQ-A7RM         TCGA-TQ-A7RN         TCGA-TQ-A7RO 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TQ-A7RP         TCGA-TQ-A7RQ         TCGA-TQ-A7RR 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TQ-A7RS         TCGA-TQ-A7RU         TCGA-TQ-A7RV 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TQ-A7RW         TCGA-TQ-A8XE         TCGA-VM-A8C8 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-VM-A8C9         TCGA-VM-A8CA         TCGA-VM-A8CB 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-VM-A8CD         TCGA-VM-A8CE         TCGA-VM-A8CF 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-VM-A8CH         TCGA-VV-A829         TCGA-VV-A86M 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-VW-A7QS         TCGA-VW-A8FI         TCGA-W9-A837 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-WH-A86K         TCGA-WY-A858         TCGA-WY-A859 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-WY-A85A         TCGA-WY-A85B         TCGA-WY-A85C 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-WY-A85D         TCGA-WY-A85E 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  KRTAP5-3 MUTATED        1      0      0      0      1      0
  KRTAP5-3 WILD-TYPE     98     77    120     57     62     92
D55V14, multiclass
[1] "Remove cluster labels:" "KRTAP5-3 MUTATED"      
clus
  KRTAP5-3 MUTATED KRTAP5-3 WILD-TYPE 
                 2                506 
        TCGA-CS-4938         TCGA-CS-4941         TCGA-CS-4942 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-CS-4943         TCGA-CS-4944         TCGA-CS-5390 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-CS-5393         TCGA-CS-5394         TCGA-CS-5395 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-CS-5396         TCGA-CS-5397         TCGA-CS-6186 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-CS-6188         TCGA-CS-6290         TCGA-CS-6665 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-CS-6666         TCGA-CS-6667         TCGA-CS-6668 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-CS-6669         TCGA-CS-6670         TCGA-DB-5270 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DB-5273         TCGA-DB-5274         TCGA-DB-5275 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DB-5276         TCGA-DB-5277         TCGA-DB-5278 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DB-5279         TCGA-DB-5281         TCGA-DB-A4X9 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DB-A4XA         TCGA-DB-A4XB         TCGA-DB-A4XC 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DB-A4XD         TCGA-DB-A4XE         TCGA-DB-A4XF 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DB-A4XG         TCGA-DB-A4XH         TCGA-DB-A64L 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DB-A64O         TCGA-DB-A64P         TCGA-DB-A64Q 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DB-A64R         TCGA-DB-A64S         TCGA-DB-A64U 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DB-A64V         TCGA-DB-A64W         TCGA-DB-A64X 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DB-A75K         TCGA-DB-A75L         TCGA-DB-A75O 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DB-A75P         TCGA-DH-5140         TCGA-DH-5141 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DH-5142         TCGA-DH-5143         TCGA-DH-5144 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DH-A669         TCGA-DH-A66B         TCGA-DH-A66D 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DH-A66F         TCGA-DH-A66G         TCGA-DH-A7UR 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DH-A7US         TCGA-DH-A7UT         TCGA-DH-A7UU 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DH-A7UV         TCGA-DU-5847         TCGA-DU-5849 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-5851         TCGA-DU-5852         TCGA-DU-5853 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-5854         TCGA-DU-5855         TCGA-DU-5870 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-5871         TCGA-DU-5872         TCGA-DU-5874 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-6392         TCGA-DU-6393         TCGA-DU-6394 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-6395         TCGA-DU-6396         TCGA-DU-6397 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-6399         TCGA-DU-6400         TCGA-DU-6401 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-6402         TCGA-DU-6403         TCGA-DU-6404 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-6405         TCGA-DU-6406         TCGA-DU-6407 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-6408         TCGA-DU-6410         TCGA-DU-6542 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-7006         TCGA-DU-7007         TCGA-DU-7008 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-7009         TCGA-DU-7010         TCGA-DU-7013 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-7014         TCGA-DU-7015         TCGA-DU-7018 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-7019         TCGA-DU-7290         TCGA-DU-7292 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-7294         TCGA-DU-7298         TCGA-DU-7299 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-7300         TCGA-DU-7301         TCGA-DU-7302 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-7304         TCGA-DU-7306         TCGA-DU-7309 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-8158         TCGA-DU-8161         TCGA-DU-8162 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-8163         TCGA-DU-8164         TCGA-DU-8165 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-8166         TCGA-DU-8167         TCGA-DU-8168 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-A5TP         TCGA-DU-A5TR         TCGA-DU-A5TS 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-A5TT         TCGA-DU-A5TU         TCGA-DU-A5TW 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-A5TY         TCGA-DU-A6S2         TCGA-DU-A6S3 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-A6S6         TCGA-DU-A6S7         TCGA-DU-A6S8 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-A76K         TCGA-DU-A76L         TCGA-DU-A76O 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-A76R         TCGA-DU-A7T6         TCGA-DU-A7T8 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-A7TA         TCGA-DU-A7TB         TCGA-DU-A7TC 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-A7TD         TCGA-DU-A7TG         TCGA-DU-A7TI 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-DU-A7TJ         TCGA-E1-5302         TCGA-E1-5303 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-E1-5304         TCGA-E1-5305         TCGA-E1-5307 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-E1-5311         TCGA-E1-5318         TCGA-E1-5319 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-E1-5322         TCGA-E1-A7YD         TCGA-E1-A7YE 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-E1-A7YH         TCGA-E1-A7YI         TCGA-E1-A7YJ 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-E1-A7YK         TCGA-E1-A7YL         TCGA-E1-A7YM 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-E1-A7YN         TCGA-E1-A7YO         TCGA-E1-A7YQ 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-E1-A7YS         TCGA-E1-A7YU         TCGA-E1-A7YV 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-E1-A7YW         TCGA-E1-A7YY         TCGA-E1-A7Z2 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-E1-A7Z3         TCGA-E1-A7Z4         TCGA-E1-A7Z6 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-EZ-7264         TCGA-F6-A8O3         TCGA-F6-A8O4 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-5962         TCGA-FG-5963         TCGA-FG-5964 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-5965         TCGA-FG-6688         TCGA-FG-6689 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-6690         TCGA-FG-6691         TCGA-FG-6692 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-7634         TCGA-FG-7636         TCGA-FG-7637 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-7638         TCGA-FG-7641         TCGA-FG-7643 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-8181         TCGA-FG-8182         TCGA-FG-8185 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-8186         TCGA-FG-8187         TCGA-FG-8189 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-8191         TCGA-FG-A4MT         TCGA-FG-A4MU 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-A4MW         TCGA-FG-A4MX         TCGA-FG-A4MY 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-A60J         TCGA-FG-A60K         TCGA-FG-A60L 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-A6IZ         TCGA-FG-A6J1         TCGA-FG-A6J3 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-A70Y         TCGA-FG-A70Z         TCGA-FG-A710 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-A711         TCGA-FG-A713         TCGA-FG-A87N 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-FG-A87Q         TCGA-FN-7833         TCGA-HT-7467 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7468         TCGA-HT-7469         TCGA-HT-7470 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7471         TCGA-HT-7472         TCGA-HT-7473 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7474         TCGA-HT-7475         TCGA-HT-7476 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7477         TCGA-HT-7478         TCGA-HT-7479 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7480         TCGA-HT-7481         TCGA-HT-7482 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7483         TCGA-HT-7485         TCGA-HT-7601 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7602         TCGA-HT-7603         TCGA-HT-7604 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7605         TCGA-HT-7606         TCGA-HT-7607 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7608         TCGA-HT-7609         TCGA-HT-7610 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7611         TCGA-HT-7616         TCGA-HT-7620 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7676         TCGA-HT-7677         TCGA-HT-7680 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7681         TCGA-HT-7684         TCGA-HT-7686 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7687         TCGA-HT-7688         TCGA-HT-7689 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7690         TCGA-HT-7691         TCGA-HT-7692 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7693         TCGA-HT-7694         TCGA-HT-7695 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7854         TCGA-HT-7855         TCGA-HT-7856 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7857         TCGA-HT-7858         TCGA-HT-7860 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7873         TCGA-HT-7874         TCGA-HT-7875 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7877         TCGA-HT-7879         TCGA-HT-7880 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7881         TCGA-HT-7882         TCGA-HT-7884 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-7902         TCGA-HT-8010         TCGA-HT-8011 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-8012         TCGA-HT-8013         TCGA-HT-8015 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-8018         TCGA-HT-8019         TCGA-HT-8104 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-8105         TCGA-HT-8106         TCGA-HT-8107 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-8108         TCGA-HT-8109         TCGA-HT-8110 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-8111         TCGA-HT-8113         TCGA-HT-8114 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-8558         TCGA-HT-8563         TCGA-HT-8564 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-A4DS         TCGA-HT-A4DV         TCGA-HT-A5R5 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-A5R7         TCGA-HT-A5R9         TCGA-HT-A5RA 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-A5RB         TCGA-HT-A5RC         TCGA-HT-A614 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-A615         TCGA-HT-A616         TCGA-HT-A617 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-A618         TCGA-HT-A619         TCGA-HT-A61A 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-A61B         TCGA-HT-A61C         TCGA-HT-A74H 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HT-A74K         TCGA-HT-A74L         TCGA-HT-A74O 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HW-7486         TCGA-HW-7487         TCGA-HW-7489 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HW-7490         TCGA-HW-7491         TCGA-HW-7493 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HW-7495         TCGA-HW-8319         TCGA-HW-8320 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HW-8321         TCGA-HW-8322         TCGA-HW-A5KJ 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-HW-A5KK         TCGA-HW-A5KL         TCGA-HW-A5KM 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-IK-7675         TCGA-IK-8125         TCGA-KT-A74X 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-KT-A7W1         TCGA-P5-A5ET         TCGA-P5-A5EU 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-P5-A5EV         TCGA-P5-A5EW         TCGA-P5-A5EX 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-P5-A5EY         TCGA-P5-A5EZ         TCGA-P5-A5F0 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-P5-A5F1         TCGA-P5-A5F2         TCGA-P5-A5F4 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-P5-A72U         TCGA-P5-A72W         TCGA-P5-A72X 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-P5-A72Z         TCGA-P5-A730         TCGA-P5-A731 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-P5-A733         TCGA-P5-A735         TCGA-P5-A737 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-P5-A77W         TCGA-P5-A77X         TCGA-P5-A780 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-P5-A781         TCGA-QH-A65R         TCGA-QH-A65S 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-QH-A65V         TCGA-QH-A65X         TCGA-QH-A65Z 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-QH-A6CS         TCGA-QH-A6CU         TCGA-QH-A6CV 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-QH-A6CX         TCGA-QH-A6CY         TCGA-QH-A6CZ 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-QH-A6X3         TCGA-QH-A6X4         TCGA-QH-A6X5 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-QH-A6X8         TCGA-QH-A6X9         TCGA-QH-A6XA 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-QH-A6XC         TCGA-QH-A86X         TCGA-QH-A870 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-R8-A6MK         TCGA-R8-A6ML         TCGA-R8-A6MO 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-R8-A6YH         TCGA-R8-A73M         TCGA-RY-A83X 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-RY-A83Y         TCGA-RY-A83Z         TCGA-RY-A840 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-RY-A843         TCGA-RY-A845         TCGA-RY-A847 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A6TS         TCGA-S9-A6TU         TCGA-S9-A6TV 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A6TW         TCGA-S9-A6TX         TCGA-S9-A6TY 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A6TZ         TCGA-S9-A6U0         TCGA-S9-A6U1 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A6U2         TCGA-S9-A6U5         TCGA-S9-A6U6 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A6U8         TCGA-S9-A6UA         TCGA-S9-A6UB 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A6WD         TCGA-S9-A6WE         TCGA-S9-A6WG 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A6WH         TCGA-S9-A6WI         TCGA-S9-A6WL 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A6WM         TCGA-S9-A6WN         TCGA-S9-A6WO 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A6WP         TCGA-S9-A6WQ         TCGA-S9-A7IQ 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A7IS         TCGA-S9-A7IX         TCGA-S9-A7IY 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A7IZ         TCGA-S9-A7J0         TCGA-S9-A7J1 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A7J2         TCGA-S9-A7J3         TCGA-S9-A7QW 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A7QX         TCGA-S9-A7QY         TCGA-S9-A7QZ 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A7R1         TCGA-S9-A7R2         TCGA-S9-A7R3 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A7R4         TCGA-S9-A7R7         TCGA-S9-A7R8 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-S9-A89V         TCGA-S9-A89Z         TCGA-TM-A7C3 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TM-A7C4         TCGA-TM-A7C5         TCGA-TM-A7CA 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TM-A7CF         TCGA-TM-A84B         TCGA-TM-A84C 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TM-A84F         TCGA-TM-A84G         TCGA-TM-A84H 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TM-A84I         TCGA-TM-A84J         TCGA-TM-A84L 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TM-A84M         TCGA-TM-A84O         TCGA-TM-A84Q 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TM-A84R         TCGA-TM-A84S         TCGA-TM-A84T 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TQ-A7RF         TCGA-TQ-A7RG         TCGA-TQ-A7RH 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TQ-A7RI         TCGA-TQ-A7RJ         TCGA-TQ-A7RK 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TQ-A7RM         TCGA-TQ-A7RN         TCGA-TQ-A7RO 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TQ-A7RP         TCGA-TQ-A7RQ         TCGA-TQ-A7RR 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TQ-A7RS         TCGA-TQ-A7RU         TCGA-TQ-A7RV 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-TQ-A7RW         TCGA-TQ-A8XE         TCGA-VM-A8C8 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-VM-A8C9         TCGA-VM-A8CA         TCGA-VM-A8CB 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-VM-A8CD         TCGA-VM-A8CE         TCGA-VM-A8CF 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-VM-A8CH         TCGA-VV-A829         TCGA-VV-A86M 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-VW-A7QS         TCGA-VW-A8FI         TCGA-W9-A837 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-WH-A86K         TCGA-WY-A858         TCGA-WY-A859 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-WY-A85A         TCGA-WY-A85B         TCGA-WY-A85C 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 
        TCGA-WY-A85D         TCGA-WY-A85E 
"KRTAP5-3 WILD-TYPE" "KRTAP5-3 WILD-TYPE" 

Clustering(56) Variable = SRPX MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRPX MUTATED        0      0      0      0
  SRPX WILD-TYPE     78     41     64     57
D56V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRPX MUTATED        0      0      0      0
  SRPX WILD-TYPE     63     50     48     79
D56V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRPX MUTATED        0      0      0      0
  SRPX WILD-TYPE     70     98     44     63
D56V3, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SRPX MUTATED        0      0      0
  SRPX WILD-TYPE    138     61     76
D56V4, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SRPX MUTATED        2      2      0
  SRPX WILD-TYPE    290    430     62
D56V5, multiclass
        clus
vv       SRPX MUTATED SRPX WILD-TYPE
  CLUS_1            2            290
  CLUS_2            2            430
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRPX MUTATED        2      0      0      2
  SRPX WILD-TYPE    151    223     88    159
D56V6, multiclass
        clus
vv       SRPX MUTATED SRPX WILD-TYPE
  CLUS_1            2            151
  CLUS_2            0            223
  CLUS_3            0             88
  CLUS_4            2            159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRPX MUTATED        2      0      2      0
  SRPX WILD-TYPE    183    155    136     95
D56V7, multiclass
        clus
vv       SRPX MUTATED SRPX WILD-TYPE
  CLUS_1            2            183
  CLUS_2            0            155
  CLUS_3            2            136
  CLUS_4            0             95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SRPX MUTATED        2      2      0
  SRPX WILD-TYPE    203    218    148
D56V8, multiclass
        clus
vv       SRPX MUTATED SRPX WILD-TYPE
  CLUS_1            2            203
  CLUS_2            2            218
  CLUS_3            0            148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SRPX MUTATED        2      0      2
  SRPX WILD-TYPE    236    191    226
D56V9, multiclass
        clus
vv       SRPX MUTATED SRPX WILD-TYPE
  CLUS_1            2            236
  CLUS_2            0            191
  CLUS_3            2            226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SRPX MUTATED        2      0      2
  SRPX WILD-TYPE    194    191    268
D56V10, multiclass
        clus
vv       SRPX MUTATED SRPX WILD-TYPE
  CLUS_1            2            194
  CLUS_2            0            191
  CLUS_3            2            268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRPX MUTATED        2      1      1      0
  SRPX WILD-TYPE    138    106     82    182
D56V11, multiclass
        clus
vv       SRPX MUTATED SRPX WILD-TYPE
  CLUS_1            2            138
  CLUS_2            1            106
  CLUS_3            1             82
  CLUS_4            0            182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SRPX MUTATED        2      0      2
  SRPX WILD-TYPE    221    186    101
D56V12, multiclass
        clus
vv       SRPX MUTATED SRPX WILD-TYPE
  CLUS_1            2            221
  CLUS_2            0            186
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRPX MUTATED        2      1      1      0
  SRPX WILD-TYPE    125    118    105    156
D56V13, multiclass
        clus
vv       SRPX MUTATED SRPX WILD-TYPE
  CLUS_1            2            125
  CLUS_2            1            118
  CLUS_3            1            105
  CLUS_4            0            156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  SRPX MUTATED        0      0      0      2      2      0
  SRPX WILD-TYPE     99     77    120     55     61     92
D56V14, multiclass
        clus
vv       SRPX MUTATED SRPX WILD-TYPE
  CLUS_1            0             99
  CLUS_2            0             77
  CLUS_3            0            120
  CLUS_4            2             55
  CLUS_5            2             61
  CLUS_6            0             92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(57) Variable = WRN MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WRN MUTATED        0      0      0      1
  WRN WILD-TYPE     78     41     64     56
D57V1, multiclass
[1] "Remove cluster labels:" "WRN MUTATED"           
clus
  WRN MUTATED WRN WILD-TYPE 
            1           239 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-2470    TCGA-02-2483 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124    TCGA-06-0126 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0132    TCGA-06-0137 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157    TCGA-06-0158 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0166    TCGA-06-0167    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-2557    TCGA-06-2559 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564    TCGA-06-2565 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408    TCGA-06-5410 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414    TCGA-06-5415 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858    TCGA-06-5859 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-6389    TCGA-06-6390    TCGA-06-6391    TCGA-08-0386    TCGA-12-0616 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692    TCGA-12-0821 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652    TCGA-12-3653 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0781    TCGA-14-0786 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813    TCGA-14-0817 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-0871    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825    TCGA-14-1829 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742    TCGA-15-1444 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048    TCGA-19-1390 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623    TCGA-19-2624 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068    TCGA-19-5947 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5954    TCGA-19-5955 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439    TCGA-26-1442 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135    TCGA-26-5136 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-26-5139    TCGA-27-1830    TCGA-27-1831    TCGA-27-1832    TCGA-27-1833 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-1834    TCGA-27-1835    TCGA-27-1836    TCGA-27-1837    TCGA-27-1838 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-2518    TCGA-27-2519    TCGA-27-2521    TCGA-27-2523    TCGA-27-2524 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-2526    TCGA-27-2527    TCGA-27-2528    TCGA-28-1747    TCGA-28-1753 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-2501    TCGA-28-2502    TCGA-28-2509    TCGA-28-2510    TCGA-28-2513 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-2514    TCGA-28-5204    TCGA-28-5207    TCGA-28-5208    TCGA-28-5209 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-5213    TCGA-28-5214    TCGA-28-5215    TCGA-28-5216    TCGA-28-5218 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-5219    TCGA-28-5220    TCGA-28-6450    TCGA-32-1970    TCGA-32-1977 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-1979    TCGA-32-1980    TCGA-32-1982    TCGA-32-1986    TCGA-32-1991 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-2491    TCGA-32-2494    TCGA-32-2495    TCGA-32-2615    TCGA-32-2632 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-2634    TCGA-32-2638    TCGA-32-4208    TCGA-32-4209    TCGA-32-4210 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-4211    TCGA-32-4213    TCGA-32-4719    TCGA-32-5222    TCGA-41-2571 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-41-2572    TCGA-41-2573    TCGA-41-2575    TCGA-41-3392    TCGA-41-3393 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-41-3915    TCGA-41-4097    TCGA-41-5651    TCGA-76-4925    TCGA-76-4926 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-4927    TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-4934    TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6285    TCGA-81-5910    TCGA-87-5896 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WRN MUTATED        0      1      0      0
  WRN WILD-TYPE     63     49     48     79
D57V2, multiclass
[1] "Remove cluster labels:" "WRN MUTATED"           
clus
  WRN MUTATED WRN WILD-TYPE 
            1           239 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-2470    TCGA-02-2483 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124    TCGA-06-0126 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0132    TCGA-06-0137 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157    TCGA-06-0158 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0166    TCGA-06-0167    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-2557    TCGA-06-2559 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564    TCGA-06-2565 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408    TCGA-06-5410 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414    TCGA-06-5415 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858    TCGA-06-5859 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-6389    TCGA-06-6390    TCGA-06-6391    TCGA-08-0386    TCGA-12-0616 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692    TCGA-12-0821 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652    TCGA-12-3653 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0781    TCGA-14-0786 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813    TCGA-14-0817 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-0871    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825    TCGA-14-1829 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742    TCGA-15-1444 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048    TCGA-19-1390 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623    TCGA-19-2624 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068    TCGA-19-5947 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5954    TCGA-19-5955 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439    TCGA-26-1442 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135    TCGA-26-5136 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-26-5139    TCGA-27-1830    TCGA-27-1831    TCGA-27-1832    TCGA-27-1833 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-1834    TCGA-27-1835    TCGA-27-1836    TCGA-27-1837    TCGA-27-1838 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-2518    TCGA-27-2519    TCGA-27-2521    TCGA-27-2523    TCGA-27-2524 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-2526    TCGA-27-2527    TCGA-27-2528    TCGA-28-1747    TCGA-28-1753 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-2501    TCGA-28-2502    TCGA-28-2509    TCGA-28-2510    TCGA-28-2513 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-2514    TCGA-28-5204    TCGA-28-5207    TCGA-28-5208    TCGA-28-5209 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-5213    TCGA-28-5214    TCGA-28-5215    TCGA-28-5216    TCGA-28-5218 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-5219    TCGA-28-5220    TCGA-28-6450    TCGA-32-1970    TCGA-32-1977 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-1979    TCGA-32-1980    TCGA-32-1982    TCGA-32-1986    TCGA-32-1991 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-2491    TCGA-32-2494    TCGA-32-2495    TCGA-32-2615    TCGA-32-2632 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-2634    TCGA-32-2638    TCGA-32-4208    TCGA-32-4209    TCGA-32-4210 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-4211    TCGA-32-4213    TCGA-32-4719    TCGA-32-5222    TCGA-41-2571 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-41-2572    TCGA-41-2573    TCGA-41-2575    TCGA-41-3392    TCGA-41-3393 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-41-3915    TCGA-41-4097    TCGA-41-5651    TCGA-76-4925    TCGA-76-4926 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-4927    TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-4934    TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6285    TCGA-81-5910    TCGA-87-5896 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WRN MUTATED        0      0      1      0
  WRN WILD-TYPE     70     98     43     63
D57V3, multiclass
[1] "Remove cluster labels:" "WRN MUTATED"           
clus
  WRN MUTATED WRN WILD-TYPE 
            1           274 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-0055    TCGA-02-2470 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-02-2483    TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0126    TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0137 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0151    TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0158    TCGA-06-0166    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-1806    TCGA-06-2557 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-5859    TCGA-06-6388    TCGA-06-6389    TCGA-06-6390    TCGA-06-6391 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-6693    TCGA-06-6694    TCGA-06-6695    TCGA-06-6697    TCGA-06-6698 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-6699    TCGA-06-6700    TCGA-06-6701    TCGA-08-0386    TCGA-12-0616 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692    TCGA-12-0821 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652    TCGA-12-3653 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0740    TCGA-14-0781 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-0817    TCGA-14-0862    TCGA-14-0871    TCGA-14-1043    TCGA-14-1395 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-1450    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825    TCGA-14-1829 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742    TCGA-15-1444 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048    TCGA-19-1390 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623    TCGA-19-2624 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068    TCGA-19-5947 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5953    TCGA-19-5954 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-26-5136    TCGA-26-5139    TCGA-26-6173    TCGA-26-6174    TCGA-27-1830 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-1831    TCGA-27-1832    TCGA-27-1833    TCGA-27-1834    TCGA-27-1835 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-1836    TCGA-27-1837    TCGA-27-1838    TCGA-27-2518    TCGA-27-2519 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-2521    TCGA-27-2523    TCGA-27-2524    TCGA-27-2526    TCGA-27-2527 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-2528    TCGA-28-1747    TCGA-28-1753    TCGA-28-2502    TCGA-28-2509 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-2510    TCGA-28-2513    TCGA-28-2514    TCGA-28-5204    TCGA-28-5207 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-5208    TCGA-28-5209    TCGA-28-5211    TCGA-28-5213    TCGA-28-5214 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-5215    TCGA-28-5216    TCGA-28-5218    TCGA-28-5219    TCGA-28-5220 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-6450    TCGA-32-1970    TCGA-32-1977    TCGA-32-1979    TCGA-32-1980 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-1982    TCGA-32-1986    TCGA-32-1991    TCGA-32-2491    TCGA-32-2494 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-2495    TCGA-32-2615    TCGA-32-2632    TCGA-32-2634    TCGA-32-2638 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-4208    TCGA-32-4209    TCGA-32-4210    TCGA-32-4211    TCGA-32-4213 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-4719    TCGA-32-5222    TCGA-41-2571    TCGA-41-2572    TCGA-41-2573 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-41-2575    TCGA-41-3392    TCGA-41-3393    TCGA-41-3915    TCGA-41-4097 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-41-5651    TCGA-41-6646    TCGA-74-6573    TCGA-74-6575    TCGA-74-6577 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-74-6578    TCGA-74-6584    TCGA-76-4925    TCGA-76-4926    TCGA-76-4927 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932    TCGA-76-4934 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193    TCGA-76-6280 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6283    TCGA-76-6285    TCGA-76-6286    TCGA-76-6656 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-6657    TCGA-76-6660    TCGA-76-6661    TCGA-76-6662    TCGA-76-6663 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-6664    TCGA-81-5910    TCGA-81-5911    TCGA-87-5896 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  WRN MUTATED        1      0      0
  WRN WILD-TYPE    137     61     76
D57V4, multiclass
[1] "Remove cluster labels:" "WRN MUTATED"           
clus
  WRN MUTATED WRN WILD-TYPE 
            1           274 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-0055    TCGA-02-2470 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-02-2483    TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0126    TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0137 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0151    TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0158    TCGA-06-0166    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-1806    TCGA-06-2557 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-5859    TCGA-06-6388    TCGA-06-6389    TCGA-06-6390    TCGA-06-6391 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-6693    TCGA-06-6694    TCGA-06-6695    TCGA-06-6697    TCGA-06-6698 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-06-6699    TCGA-06-6700    TCGA-06-6701    TCGA-08-0386    TCGA-12-0616 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692    TCGA-12-0821 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652    TCGA-12-3653 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0740    TCGA-14-0781 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-0817    TCGA-14-0862    TCGA-14-0871    TCGA-14-1043    TCGA-14-1395 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-1450    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825    TCGA-14-1829 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742    TCGA-15-1444 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048    TCGA-19-1390 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623    TCGA-19-2624 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068    TCGA-19-5947 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5953    TCGA-19-5954 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-26-5136    TCGA-26-5139    TCGA-26-6173    TCGA-26-6174    TCGA-27-1830 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-1831    TCGA-27-1832    TCGA-27-1833    TCGA-27-1834    TCGA-27-1835 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-1836    TCGA-27-1837    TCGA-27-1838    TCGA-27-2518    TCGA-27-2519 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-2521    TCGA-27-2523    TCGA-27-2524    TCGA-27-2526    TCGA-27-2527 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-27-2528    TCGA-28-1747    TCGA-28-1753    TCGA-28-2502    TCGA-28-2509 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-2510    TCGA-28-2513    TCGA-28-2514    TCGA-28-5204    TCGA-28-5207 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-5208    TCGA-28-5209    TCGA-28-5211    TCGA-28-5213    TCGA-28-5214 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-5215    TCGA-28-5216    TCGA-28-5218    TCGA-28-5219    TCGA-28-5220 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-28-6450    TCGA-32-1970    TCGA-32-1977    TCGA-32-1979    TCGA-32-1980 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-1982    TCGA-32-1986    TCGA-32-1991    TCGA-32-2491    TCGA-32-2494 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-2495    TCGA-32-2615    TCGA-32-2632    TCGA-32-2634    TCGA-32-2638 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-4208    TCGA-32-4209    TCGA-32-4210    TCGA-32-4211    TCGA-32-4213 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-32-4719    TCGA-32-5222    TCGA-41-2571    TCGA-41-2572    TCGA-41-2573 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-41-2575    TCGA-41-3392    TCGA-41-3393    TCGA-41-3915    TCGA-41-4097 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-41-5651    TCGA-41-6646    TCGA-74-6573    TCGA-74-6575    TCGA-74-6577 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-74-6578    TCGA-74-6584    TCGA-76-4925    TCGA-76-4926    TCGA-76-4927 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932    TCGA-76-4934 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193    TCGA-76-6280 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6283    TCGA-76-6285    TCGA-76-6286    TCGA-76-6656 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-6657    TCGA-76-6660    TCGA-76-6661    TCGA-76-6662    TCGA-76-6663 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
   TCGA-76-6664    TCGA-81-5910    TCGA-81-5911    TCGA-87-5896 
"WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" "WRN WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  WRN MUTATED        2      4      0
  WRN WILD-TYPE    290    428     62
D57V5, multiclass
        clus
vv       WRN MUTATED WRN WILD-TYPE
  CLUS_1           2           290
  CLUS_2           4           428
  CLUS_3           0            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WRN MUTATED        1      0      0      4
  WRN WILD-TYPE    152    223     88    157
D57V6, multiclass
        clus
vv       WRN MUTATED WRN WILD-TYPE
  CLUS_1           1           152
  CLUS_2           0           223
  CLUS_3           0            88
  CLUS_4           4           157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WRN MUTATED        2      2      1      0
  WRN WILD-TYPE    183    153    137     95
D57V7, multiclass
        clus
vv       WRN MUTATED WRN WILD-TYPE
  CLUS_1           2           183
  CLUS_2           2           153
  CLUS_3           1           137
  CLUS_4           0            95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  WRN MUTATED        2      1      2
  WRN WILD-TYPE    203    219    146
D57V8, multiclass
        clus
vv       WRN MUTATED WRN WILD-TYPE
  CLUS_1           2           203
  CLUS_2           1           219
  CLUS_3           2           146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  WRN MUTATED        2      2      2
  WRN WILD-TYPE    236    189    226
D57V9, multiclass
        clus
vv       WRN MUTATED WRN WILD-TYPE
  CLUS_1           2           236
  CLUS_2           2           189
  CLUS_3           2           226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  WRN MUTATED        1      1      4
  WRN WILD-TYPE    195    190    266
D57V10, multiclass
        clus
vv       WRN MUTATED WRN WILD-TYPE
  CLUS_1           1           195
  CLUS_2           1           190
  CLUS_3           4           266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WRN MUTATED        0      1      3      1
  WRN WILD-TYPE    140    106     80    181
D57V11, multiclass
        clus
vv       WRN MUTATED WRN WILD-TYPE
  CLUS_1           0           140
  CLUS_2           1           106
  CLUS_3           3            80
  CLUS_4           1           181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  WRN MUTATED        2      2      1
  WRN WILD-TYPE    221    184    102
D57V12, multiclass
        clus
vv       WRN MUTATED WRN WILD-TYPE
  CLUS_1           2           221
  CLUS_2           2           184
  CLUS_3           1           102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WRN MUTATED        0      0      4      1
  WRN WILD-TYPE    127    119    102    155
D57V13, multiclass
        clus
vv       WRN MUTATED WRN WILD-TYPE
  CLUS_1           0           127
  CLUS_2           0           119
  CLUS_3           4           102
  CLUS_4           1           155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  WRN MUTATED        0      0      0      3      0      2
  WRN WILD-TYPE     99     77    120     54     63     90
D57V14, multiclass
        clus
vv       WRN MUTATED WRN WILD-TYPE
  CLUS_1           0            99
  CLUS_2           0            77
  CLUS_3           0           120
  CLUS_4           3            54
  CLUS_5           0            63
  CLUS_6           2            90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(58) Variable = NEU2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NEU2 MUTATED        1      0      0      2
  NEU2 WILD-TYPE     77     41     64     55
D58V1, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            1             77
  CLUS_2            0             41
  CLUS_3            0             64
  CLUS_4            2             55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NEU2 MUTATED        0      1      0      2
  NEU2 WILD-TYPE     63     49     48     77
D58V2, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            0             63
  CLUS_2            1             49
  CLUS_3            0             48
  CLUS_4            2             77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NEU2 MUTATED        1      1      1      0
  NEU2 WILD-TYPE     69     97     43     63
D58V3, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            1             69
  CLUS_2            1             97
  CLUS_3            1             43
  CLUS_4            0             63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NEU2 MUTATED        2      0      1
  NEU2 WILD-TYPE    136     61     75
D58V4, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            2            136
  CLUS_2            0             61
  CLUS_3            1             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NEU2 MUTATED        4      4      1
  NEU2 WILD-TYPE    288    428     61
D58V5, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            4            288
  CLUS_2            4            428
  CLUS_3            1             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NEU2 MUTATED        1      3      1      1
  NEU2 WILD-TYPE    152    220     87    160
D58V6, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            1            152
  CLUS_2            3            220
  CLUS_3            1             87
  CLUS_4            1            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NEU2 MUTATED        2      2      1      2
  NEU2 WILD-TYPE    183    153    137     93
D58V7, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            2            183
  CLUS_2            2            153
  CLUS_3            1            137
  CLUS_4            2             93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NEU2 MUTATED        1      4      2
  NEU2 WILD-TYPE    204    216    146
D58V8, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            1            204
  CLUS_2            4            216
  CLUS_3            2            146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NEU2 MUTATED        4      1      3
  NEU2 WILD-TYPE    234    190    225
D58V9, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            4            234
  CLUS_2            1            190
  CLUS_3            3            225
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NEU2 MUTATED        3      4      1
  NEU2 WILD-TYPE    193    187    269
D58V10, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            3            193
  CLUS_2            4            187
  CLUS_3            1            269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NEU2 MUTATED        0      2      2      2
  NEU2 WILD-TYPE    140    105     81    180
D58V11, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            0            140
  CLUS_2            2            105
  CLUS_3            2             81
  CLUS_4            2            180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NEU2 MUTATED        2      2      2
  NEU2 WILD-TYPE    221    184    101
D58V12, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            2            221
  CLUS_2            2            184
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NEU2 MUTATED        1      0      2      3
  NEU2 WILD-TYPE    126    119    104    153
D58V13, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            1            126
  CLUS_2            0            119
  CLUS_3            2            104
  CLUS_4            3            153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  NEU2 MUTATED        0      0      2      1      0      3
  NEU2 WILD-TYPE     99     77    118     56     63     89
D58V14, multiclass
        clus
vv       NEU2 MUTATED NEU2 WILD-TYPE
  CLUS_1            0             99
  CLUS_2            0             77
  CLUS_3            2            118
  CLUS_4            1             56
  CLUS_5            0             63
  CLUS_6            3             89
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(59) Variable = TMEM216 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM216 MUTATED        0      0      0      0
  TMEM216 WILD-TYPE     78     41     64     57
D59V1, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM216 MUTATED        0      0      0      0
  TMEM216 WILD-TYPE     63     50     48     79
D59V2, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM216 MUTATED        0      0      0      0
  TMEM216 WILD-TYPE     70     98     44     63
D59V3, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM216 MUTATED        0      0      0
  TMEM216 WILD-TYPE    138     61     76
D59V4, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM216 MUTATED        0      3      0
  TMEM216 WILD-TYPE    292    429     62
D59V5, multiclass
        clus
vv       TMEM216 MUTATED TMEM216 WILD-TYPE
  CLUS_1               0               292
  CLUS_2               3               429
  CLUS_3               0                62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM216 MUTATED        0      2      0      1
  TMEM216 WILD-TYPE    153    221     88    160
D59V6, multiclass
        clus
vv       TMEM216 MUTATED TMEM216 WILD-TYPE
  CLUS_1               0               153
  CLUS_2               2               221
  CLUS_3               0                88
  CLUS_4               1               160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM216 MUTATED        1      1      0      1
  TMEM216 WILD-TYPE    184    154    138     94
D59V7, multiclass
        clus
vv       TMEM216 MUTATED TMEM216 WILD-TYPE
  CLUS_1               1               184
  CLUS_2               1               154
  CLUS_3               0               138
  CLUS_4               1                94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM216 MUTATED        1      0      2
  TMEM216 WILD-TYPE    204    220    146
D59V8, multiclass
        clus
vv       TMEM216 MUTATED TMEM216 WILD-TYPE
  CLUS_1               1               204
  CLUS_2               0               220
  CLUS_3               2               146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM216 MUTATED        0      2      1
  TMEM216 WILD-TYPE    238    189    227
D59V9, multiclass
        clus
vv       TMEM216 MUTATED TMEM216 WILD-TYPE
  CLUS_1               0               238
  CLUS_2               2               189
  CLUS_3               1               227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM216 MUTATED        0      1      2
  TMEM216 WILD-TYPE    196    190    268
D59V10, multiclass
        clus
vv       TMEM216 MUTATED TMEM216 WILD-TYPE
  CLUS_1               0               196
  CLUS_2               1               190
  CLUS_3               2               268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM216 MUTATED        0      1      1      1
  TMEM216 WILD-TYPE    140    106     82    181
D59V11, multiclass
        clus
vv       TMEM216 MUTATED TMEM216 WILD-TYPE
  CLUS_1               0               140
  CLUS_2               1               106
  CLUS_3               1                82
  CLUS_4               1               181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM216 MUTATED        1      2      0
  TMEM216 WILD-TYPE    222    184    103
D59V12, multiclass
        clus
vv       TMEM216 MUTATED TMEM216 WILD-TYPE
  CLUS_1               1               222
  CLUS_2               2               184
  CLUS_3               0               103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM216 MUTATED        0      2      0      1
  TMEM216 WILD-TYPE    127    117    106    155
D59V13, multiclass
        clus
vv       TMEM216 MUTATED TMEM216 WILD-TYPE
  CLUS_1               0               127
  CLUS_2               2               117
  CLUS_3               0               106
  CLUS_4               1               155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  TMEM216 MUTATED        0      1      1      0      0      1
  TMEM216 WILD-TYPE     99     76    119     57     63     91
D59V14, multiclass
        clus
vv       TMEM216 MUTATED TMEM216 WILD-TYPE
  CLUS_1               0                99
  CLUS_2               1                76
  CLUS_3               1               119
  CLUS_4               0                57
  CLUS_5               0                63
  CLUS_6               1                91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(60) Variable = KTELC1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KTELC1 MUTATED        0      0      0      0
  KTELC1 WILD-TYPE     78     41     64     57
D60V1, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KTELC1 MUTATED        0      0      0      0
  KTELC1 WILD-TYPE     63     50     48     79
D60V2, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KTELC1 MUTATED        0      0      0      0
  KTELC1 WILD-TYPE     70     98     44     63
D60V3, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KTELC1 MUTATED        0      0      0
  KTELC1 WILD-TYPE    138     61     76
D60V4, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KTELC1 MUTATED        0      5      0
  KTELC1 WILD-TYPE    292    427     62
D60V5, multiclass
        clus
vv       KTELC1 MUTATED KTELC1 WILD-TYPE
  CLUS_1              0              292
  CLUS_2              5              427
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KTELC1 MUTATED        0      4      0      1
  KTELC1 WILD-TYPE    153    219     88    160
D60V6, multiclass
        clus
vv       KTELC1 MUTATED KTELC1 WILD-TYPE
  CLUS_1              0              153
  CLUS_2              4              219
  CLUS_3              0               88
  CLUS_4              1              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KTELC1 MUTATED        3      1      0      0
  KTELC1 WILD-TYPE    182    154    138     95
D60V7, multiclass
        clus
vv       KTELC1 MUTATED KTELC1 WILD-TYPE
  CLUS_1              3              182
  CLUS_2              1              154
  CLUS_3              0              138
  CLUS_4              0               95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KTELC1 MUTATED        3      1      0
  KTELC1 WILD-TYPE    202    219    148
D60V8, multiclass
        clus
vv       KTELC1 MUTATED KTELC1 WILD-TYPE
  CLUS_1              3              202
  CLUS_2              1              219
  CLUS_3              0              148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KTELC1 MUTATED        1      1      3
  KTELC1 WILD-TYPE    237    190    225
D60V9, multiclass
        clus
vv       KTELC1 MUTATED KTELC1 WILD-TYPE
  CLUS_1              1              237
  CLUS_2              1              190
  CLUS_3              3              225
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KTELC1 MUTATED        0      3      2
  KTELC1 WILD-TYPE    196    188    268
D60V10, multiclass
        clus
vv       KTELC1 MUTATED KTELC1 WILD-TYPE
  CLUS_1              0              196
  CLUS_2              3              188
  CLUS_3              2              268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KTELC1 MUTATED        0      3      1      1
  KTELC1 WILD-TYPE    140    104     82    181
D60V11, multiclass
        clus
vv       KTELC1 MUTATED KTELC1 WILD-TYPE
  CLUS_1              0              140
  CLUS_2              3              104
  CLUS_3              1               82
  CLUS_4              1              181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KTELC1 MUTATED        1      0      4
  KTELC1 WILD-TYPE    222    186     99
D60V12, multiclass
        clus
vv       KTELC1 MUTATED KTELC1 WILD-TYPE
  CLUS_1              1              222
  CLUS_2              0              186
  CLUS_3              4               99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KTELC1 MUTATED        2      1      1      1
  KTELC1 WILD-TYPE    125    118    105    155
D60V13, multiclass
        clus
vv       KTELC1 MUTATED KTELC1 WILD-TYPE
  CLUS_1              2              125
  CLUS_2              1              118
  CLUS_3              1              105
  CLUS_4              1              155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  KTELC1 MUTATED        1      1      0      1      0      2
  KTELC1 WILD-TYPE     98     76    120     56     63     90
D60V14, multiclass
        clus
vv       KTELC1 MUTATED KTELC1 WILD-TYPE
  CLUS_1              1               98
  CLUS_2              1               76
  CLUS_3              0              120
  CLUS_4              1               56
  CLUS_5              0               63
  CLUS_6              2               90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(61) Variable = ZNF41 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF41 MUTATED        0      0      0      1
  ZNF41 WILD-TYPE     78     41     64     56
D61V1, multiclass
[1] "Remove cluster labels:" "ZNF41 MUTATED"         
clus
  ZNF41 MUTATED ZNF41 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0189      TCGA-06-0192 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF41 MUTATED        0      1      0      0
  ZNF41 WILD-TYPE     63     49     48     79
D61V2, multiclass
[1] "Remove cluster labels:" "ZNF41 MUTATED"         
clus
  ZNF41 MUTATED ZNF41 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0189      TCGA-06-0192 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF41 MUTATED        1      0      0      1
  ZNF41 WILD-TYPE     69     98     44     62
D61V3, multiclass
[1] "Remove cluster labels:" "ZNF41 MUTATED"         
clus
  ZNF41 MUTATED ZNF41 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0189      TCGA-06-0192 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-1806 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-12-0616      TCGA-12-0618      TCGA-12-0619      TCGA-12-0688 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-12-0692      TCGA-12-0821      TCGA-12-1597      TCGA-12-3649 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-12-5299      TCGA-12-5301      TCGA-14-0740      TCGA-14-0781 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1456      TCGA-14-1823 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-14-1825      TCGA-14-1829      TCGA-14-2554      TCGA-14-3476 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-14-4157      TCGA-15-0742      TCGA-15-1444      TCGA-16-0846 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-16-0861      TCGA-16-1045      TCGA-16-1048      TCGA-19-1390 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-19-1790      TCGA-19-2619      TCGA-19-2620      TCGA-19-2623 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-19-2624      TCGA-19-2625      TCGA-19-2629      TCGA-19-2631 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-19-4068      TCGA-19-5947      TCGA-19-5950      TCGA-19-5951 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-19-5952      TCGA-19-5953      TCGA-19-5954      TCGA-19-5955 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-19-5958      TCGA-19-5959      TCGA-19-5960      TCGA-26-1439 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-26-6173 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-26-6174      TCGA-27-1830      TCGA-27-1831      TCGA-27-1832 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-27-1833      TCGA-27-1834      TCGA-27-1835      TCGA-27-1836 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-27-1837      TCGA-27-1838      TCGA-27-2518      TCGA-27-2519 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-27-2521      TCGA-27-2523      TCGA-27-2524      TCGA-27-2526 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-27-2527      TCGA-27-2528      TCGA-28-1747      TCGA-28-1753 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5211      TCGA-28-5213      TCGA-28-5214 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5219 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-28-5220      TCGA-28-6450      TCGA-32-1970      TCGA-32-1977 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-87-5896 
"ZNF41 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZNF41 MUTATED        1      0      1
  ZNF41 WILD-TYPE    137     61     75
D61V4, multiclass
[1] "Remove cluster labels:" "ZNF41 MUTATED"         
clus
  ZNF41 MUTATED ZNF41 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0189      TCGA-06-0192 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-1806 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-12-0616      TCGA-12-0618      TCGA-12-0619      TCGA-12-0688 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-12-0692      TCGA-12-0821      TCGA-12-1597      TCGA-12-3649 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-12-5299      TCGA-12-5301      TCGA-14-0740      TCGA-14-0781 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1456      TCGA-14-1823 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-14-1825      TCGA-14-1829      TCGA-14-2554      TCGA-14-3476 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-14-4157      TCGA-15-0742      TCGA-15-1444      TCGA-16-0846 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-16-0861      TCGA-16-1045      TCGA-16-1048      TCGA-19-1390 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-19-1790      TCGA-19-2619      TCGA-19-2620      TCGA-19-2623 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-19-2624      TCGA-19-2625      TCGA-19-2629      TCGA-19-2631 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-19-4068      TCGA-19-5947      TCGA-19-5950      TCGA-19-5951 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-19-5952      TCGA-19-5953      TCGA-19-5954      TCGA-19-5955 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-19-5958      TCGA-19-5959      TCGA-19-5960      TCGA-26-1439 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-26-6173 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-26-6174      TCGA-27-1830      TCGA-27-1831      TCGA-27-1832 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-27-1833      TCGA-27-1834      TCGA-27-1835      TCGA-27-1836 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-27-1837      TCGA-27-1838      TCGA-27-2518      TCGA-27-2519 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-27-2521      TCGA-27-2523      TCGA-27-2524      TCGA-27-2526 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-27-2527      TCGA-27-2528      TCGA-28-1747      TCGA-28-1753 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5211      TCGA-28-5213      TCGA-28-5214 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5219 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-28-5220      TCGA-28-6450      TCGA-32-1970      TCGA-32-1977 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" "ZNF41 WILD-TYPE" 
     TCGA-87-5896 
"ZNF41 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZNF41 MUTATED        5      3      0
  ZNF41 WILD-TYPE    287    429     62
D61V5, multiclass
        clus
vv       ZNF41 MUTATED ZNF41 WILD-TYPE
  CLUS_1             5             287
  CLUS_2             3             429
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF41 MUTATED        3      2      1      1
  ZNF41 WILD-TYPE    150    221     87    160
D61V6, multiclass
        clus
vv       ZNF41 MUTATED ZNF41 WILD-TYPE
  CLUS_1             3             150
  CLUS_2             2             221
  CLUS_3             1              87
  CLUS_4             1             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF41 MUTATED        1      1      2      1
  ZNF41 WILD-TYPE    184    154    136     94
D61V7, multiclass
        clus
vv       ZNF41 MUTATED ZNF41 WILD-TYPE
  CLUS_1             1             184
  CLUS_2             1             154
  CLUS_3             2             136
  CLUS_4             1              94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZNF41 MUTATED        2      2      1
  ZNF41 WILD-TYPE    203    218    147
D61V8, multiclass
        clus
vv       ZNF41 MUTATED ZNF41 WILD-TYPE
  CLUS_1             2             203
  CLUS_2             2             218
  CLUS_3             1             147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZNF41 MUTATED        2      2      2
  ZNF41 WILD-TYPE    236    189    226
D61V9, multiclass
        clus
vv       ZNF41 MUTATED ZNF41 WILD-TYPE
  CLUS_1             2             236
  CLUS_2             2             189
  CLUS_3             2             226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZNF41 MUTATED        1      2      3
  ZNF41 WILD-TYPE    195    189    267
D61V10, multiclass
        clus
vv       ZNF41 MUTATED ZNF41 WILD-TYPE
  CLUS_1             1             195
  CLUS_2             2             189
  CLUS_3             3             267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF41 MUTATED        2      2      0      2
  ZNF41 WILD-TYPE    138    105     83    180
D61V11, multiclass
        clus
vv       ZNF41 MUTATED ZNF41 WILD-TYPE
  CLUS_1             2             138
  CLUS_2             2             105
  CLUS_3             0              83
  CLUS_4             2             180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZNF41 MUTATED        2      2      2
  ZNF41 WILD-TYPE    221    184    101
D61V12, multiclass
        clus
vv       ZNF41 MUTATED ZNF41 WILD-TYPE
  CLUS_1             2             221
  CLUS_2             2             184
  CLUS_3             2             101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF41 MUTATED        0      3      0      3
  ZNF41 WILD-TYPE    127    116    106    153
D61V13, multiclass
        clus
vv       ZNF41 MUTATED ZNF41 WILD-TYPE
  CLUS_1             0             127
  CLUS_2             3             116
  CLUS_3             0             106
  CLUS_4             3             153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  ZNF41 MUTATED        0      2      2      0      1      1
  ZNF41 WILD-TYPE     99     75    118     57     62     91
D61V14, multiclass
        clus
vv       ZNF41 MUTATED ZNF41 WILD-TYPE
  CLUS_1             0              99
  CLUS_2             2              75
  CLUS_3             2             118
  CLUS_4             0              57
  CLUS_5             1              62
  CLUS_6             1              91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(62) Variable = SOX4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX4 MUTATED        0      0      0      1
  SOX4 WILD-TYPE     78     41     64     56
D62V1, multiclass
[1] "Remove cluster labels:" "SOX4 MUTATED"          
clus
  SOX4 MUTATED SOX4 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5418     TCGA-06-5856 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX4 MUTATED        0      1      0      0
  SOX4 WILD-TYPE     63     49     48     79
D62V2, multiclass
[1] "Remove cluster labels:" "SOX4 MUTATED"          
clus
  SOX4 MUTATED SOX4 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5418     TCGA-06-5856 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX4 MUTATED        0      1      0      0
  SOX4 WILD-TYPE     70     97     44     63
D62V3, multiclass
[1] "Remove cluster labels:" "SOX4 MUTATED"          
clus
  SOX4 MUTATED SOX4 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5418 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SOX4 MUTATED        1      0      0
  SOX4 WILD-TYPE    137     61     76
D62V4, multiclass
[1] "Remove cluster labels:" "SOX4 MUTATED"          
clus
  SOX4 MUTATED SOX4 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5418 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"SOX4 WILD-TYPE" "SOX4 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SOX4 MUTATED        2      4      0
  SOX4 WILD-TYPE    290    428     62
D62V5, multiclass
        clus
vv       SOX4 MUTATED SOX4 WILD-TYPE
  CLUS_1            2            290
  CLUS_2            4            428
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX4 MUTATED        2      1      0      4
  SOX4 WILD-TYPE    151    222     88    157
D62V6, multiclass
        clus
vv       SOX4 MUTATED SOX4 WILD-TYPE
  CLUS_1            2            151
  CLUS_2            1            222
  CLUS_3            0             88
  CLUS_4            4            157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX4 MUTATED        2      1      1      0
  SOX4 WILD-TYPE    183    154    137     95
D62V7, multiclass
        clus
vv       SOX4 MUTATED SOX4 WILD-TYPE
  CLUS_1            2            183
  CLUS_2            1            154
  CLUS_3            1            137
  CLUS_4            0             95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SOX4 MUTATED        1      3      0
  SOX4 WILD-TYPE    204    217    148
D62V8, multiclass
        clus
vv       SOX4 MUTATED SOX4 WILD-TYPE
  CLUS_1            1            204
  CLUS_2            3            217
  CLUS_3            0            148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SOX4 MUTATED        3      0      4
  SOX4 WILD-TYPE    235    191    224
D62V9, multiclass
        clus
vv       SOX4 MUTATED SOX4 WILD-TYPE
  CLUS_1            3            235
  CLUS_2            0            191
  CLUS_3            4            224
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SOX4 MUTATED        1      2      4
  SOX4 WILD-TYPE    195    189    266
D62V10, multiclass
        clus
vv       SOX4 MUTATED SOX4 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            2            189
  CLUS_3            4            266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX4 MUTATED        1      1      4      0
  SOX4 WILD-TYPE    139    106     79    182
D62V11, multiclass
        clus
vv       SOX4 MUTATED SOX4 WILD-TYPE
  CLUS_1            1            139
  CLUS_2            1            106
  CLUS_3            4             79
  CLUS_4            0            182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SOX4 MUTATED        4      0      2
  SOX4 WILD-TYPE    219    186    101
D62V12, multiclass
        clus
vv       SOX4 MUTATED SOX4 WILD-TYPE
  CLUS_1            4            219
  CLUS_2            0            186
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX4 MUTATED        0      1      4      1
  SOX4 WILD-TYPE    127    118    102    155
D62V13, multiclass
        clus
vv       SOX4 MUTATED SOX4 WILD-TYPE
  CLUS_1            0            127
  CLUS_2            1            118
  CLUS_3            4            102
  CLUS_4            1            155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  SOX4 MUTATED        0      1      0      3      1      1
  SOX4 WILD-TYPE     99     76    120     54     62     91
D62V14, multiclass
        clus
vv       SOX4 MUTATED SOX4 WILD-TYPE
  CLUS_1            0             99
  CLUS_2            1             76
  CLUS_3            0            120
  CLUS_4            3             54
  CLUS_5            1             62
  CLUS_6            1             91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(63) Variable = SERPING1 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPING1 MUTATED        0      0      0      0
  SERPING1 WILD-TYPE     78     41     64     57
D63V1, multiclass
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPING1 MUTATED        0      0      0      0
  SERPING1 WILD-TYPE     63     50     48     79
D63V2, multiclass
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPING1 MUTATED        1      0      0      0
  SERPING1 WILD-TYPE     69     98     44     63
D63V3, multiclass
[1] "Remove cluster labels:" "SERPING1 MUTATED"      
clus
  SERPING1 MUTATED SERPING1 WILD-TYPE 
                 1                274 
        TCGA-02-0003         TCGA-02-0033         TCGA-02-0047 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-02-0055         TCGA-02-2470         TCGA-02-2483 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-02-2485         TCGA-02-2486         TCGA-06-0122 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0124         TCGA-06-0126         TCGA-06-0128 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0129         TCGA-06-0130         TCGA-06-0137 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0139         TCGA-06-0140         TCGA-06-0141 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0142         TCGA-06-0145         TCGA-06-0151 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0152         TCGA-06-0154         TCGA-06-0155 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0157         TCGA-06-0158         TCGA-06-0166 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0168         TCGA-06-0169         TCGA-06-0173 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0174         TCGA-06-0178         TCGA-06-0184 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0185         TCGA-06-0188         TCGA-06-0189 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0192         TCGA-06-0195         TCGA-06-0213 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0214         TCGA-06-0216         TCGA-06-0219 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0237         TCGA-06-0238         TCGA-06-0240 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0241         TCGA-06-0644         TCGA-06-0645 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0646         TCGA-06-0648         TCGA-06-0649 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0650         TCGA-06-0686         TCGA-06-0743 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0744         TCGA-06-0745         TCGA-06-0747 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0749         TCGA-06-0750         TCGA-06-0875 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0876         TCGA-06-0877         TCGA-06-0878 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0879         TCGA-06-0881         TCGA-06-0882 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0939         TCGA-06-1804         TCGA-06-1806 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-2557         TCGA-06-2558         TCGA-06-2559 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-2561         TCGA-06-2562         TCGA-06-2563 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-2564         TCGA-06-2565         TCGA-06-2567 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-2569         TCGA-06-2570         TCGA-06-5408 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-5410         TCGA-06-5411         TCGA-06-5412 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-5413         TCGA-06-5414         TCGA-06-5415 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-5417         TCGA-06-5418         TCGA-06-5856 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-5858         TCGA-06-5859         TCGA-06-6388 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-6389         TCGA-06-6390         TCGA-06-6391 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-6693         TCGA-06-6694         TCGA-06-6695 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-6697         TCGA-06-6698         TCGA-06-6699 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-6700         TCGA-06-6701         TCGA-08-0386 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-12-0616         TCGA-12-0618         TCGA-12-0619 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-12-0688         TCGA-12-0692         TCGA-12-0821 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-12-1597         TCGA-12-3649         TCGA-12-3650 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-12-3652         TCGA-12-3653         TCGA-12-5295 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-12-5299         TCGA-12-5301         TCGA-14-0740 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-0781         TCGA-14-0786         TCGA-14-0787 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-0789         TCGA-14-0790         TCGA-14-0813 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-0817         TCGA-14-0862         TCGA-14-0871 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-1043         TCGA-14-1395         TCGA-14-1450 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-1456         TCGA-14-1823         TCGA-14-1825 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-1829         TCGA-14-2554         TCGA-14-3476 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-4157         TCGA-15-0742         TCGA-15-1444 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-16-0846         TCGA-16-0861         TCGA-16-1045 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-16-1048         TCGA-19-1390         TCGA-19-1790 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-2619         TCGA-19-2620         TCGA-19-2623 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-2624         TCGA-19-2625         TCGA-19-2629 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-2631         TCGA-19-4068         TCGA-19-5947 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-5950         TCGA-19-5951         TCGA-19-5952 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-5953         TCGA-19-5954         TCGA-19-5955 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-5958         TCGA-19-5959         TCGA-19-5960 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-26-1439         TCGA-26-1442         TCGA-26-5132 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-26-5133         TCGA-26-5134         TCGA-26-5135 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-26-5136         TCGA-26-5139         TCGA-26-6173 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-26-6174         TCGA-27-1830         TCGA-27-1831 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-27-1832         TCGA-27-1833         TCGA-27-1834 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-27-1835         TCGA-27-1836         TCGA-27-1837 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-27-1838         TCGA-27-2518         TCGA-27-2519 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-27-2521         TCGA-27-2523         TCGA-27-2524 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-27-2526         TCGA-27-2527         TCGA-27-2528 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-1747         TCGA-28-1753         TCGA-28-2502 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-2509         TCGA-28-2510         TCGA-28-2513 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-2514         TCGA-28-5204         TCGA-28-5207 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-5208         TCGA-28-5209         TCGA-28-5211 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-5213         TCGA-28-5214         TCGA-28-5215 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-5216         TCGA-28-5218         TCGA-28-5219 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-5220         TCGA-28-6450         TCGA-32-1970 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-1977         TCGA-32-1979         TCGA-32-1980 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-1982         TCGA-32-1986         TCGA-32-1991 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-2491         TCGA-32-2494         TCGA-32-2495 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-2615         TCGA-32-2632         TCGA-32-2634 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-2638         TCGA-32-4208         TCGA-32-4209 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-4210         TCGA-32-4211         TCGA-32-4213 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-4719         TCGA-32-5222         TCGA-41-2571 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-41-2572         TCGA-41-2573         TCGA-41-2575 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-41-3392         TCGA-41-3393         TCGA-41-3915 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-41-4097         TCGA-41-5651         TCGA-41-6646 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-74-6573         TCGA-74-6577         TCGA-74-6578 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-74-6584         TCGA-76-4925         TCGA-76-4926 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-4927         TCGA-76-4928         TCGA-76-4929 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-4931         TCGA-76-4932         TCGA-76-4934 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-4935         TCGA-76-6191         TCGA-76-6192 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-6193         TCGA-76-6280         TCGA-76-6282 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-6283         TCGA-76-6285         TCGA-76-6286 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-6656         TCGA-76-6657         TCGA-76-6660 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-6661         TCGA-76-6662         TCGA-76-6663 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-6664         TCGA-81-5910         TCGA-81-5911 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-87-5896 
"SERPING1 WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPING1 MUTATED        0      0      1
  SERPING1 WILD-TYPE    138     61     75
D63V4, multiclass
[1] "Remove cluster labels:" "SERPING1 MUTATED"      
clus
  SERPING1 MUTATED SERPING1 WILD-TYPE 
                 1                274 
        TCGA-02-0003         TCGA-02-0033         TCGA-02-0047 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-02-0055         TCGA-02-2470         TCGA-02-2483 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-02-2485         TCGA-02-2486         TCGA-06-0122 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0124         TCGA-06-0126         TCGA-06-0128 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0129         TCGA-06-0130         TCGA-06-0137 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0139         TCGA-06-0140         TCGA-06-0141 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0142         TCGA-06-0145         TCGA-06-0151 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0152         TCGA-06-0154         TCGA-06-0155 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0157         TCGA-06-0158         TCGA-06-0166 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0168         TCGA-06-0169         TCGA-06-0173 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0174         TCGA-06-0178         TCGA-06-0184 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0185         TCGA-06-0188         TCGA-06-0189 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0192         TCGA-06-0195         TCGA-06-0213 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0214         TCGA-06-0216         TCGA-06-0219 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0237         TCGA-06-0238         TCGA-06-0240 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0241         TCGA-06-0644         TCGA-06-0645 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0646         TCGA-06-0648         TCGA-06-0649 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0650         TCGA-06-0686         TCGA-06-0743 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0744         TCGA-06-0745         TCGA-06-0747 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0749         TCGA-06-0750         TCGA-06-0875 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0876         TCGA-06-0877         TCGA-06-0878 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0879         TCGA-06-0881         TCGA-06-0882 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-0939         TCGA-06-1804         TCGA-06-1806 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-2557         TCGA-06-2558         TCGA-06-2559 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-2561         TCGA-06-2562         TCGA-06-2563 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-2564         TCGA-06-2565         TCGA-06-2567 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-2569         TCGA-06-2570         TCGA-06-5408 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-5410         TCGA-06-5411         TCGA-06-5412 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-5413         TCGA-06-5414         TCGA-06-5415 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-5417         TCGA-06-5418         TCGA-06-5856 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-5858         TCGA-06-5859         TCGA-06-6388 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-6389         TCGA-06-6390         TCGA-06-6391 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-6693         TCGA-06-6694         TCGA-06-6695 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-6697         TCGA-06-6698         TCGA-06-6699 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-06-6700         TCGA-06-6701         TCGA-08-0386 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-12-0616         TCGA-12-0618         TCGA-12-0619 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-12-0688         TCGA-12-0692         TCGA-12-0821 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-12-1597         TCGA-12-3649         TCGA-12-3650 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-12-3652         TCGA-12-3653         TCGA-12-5295 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-12-5299         TCGA-12-5301         TCGA-14-0740 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-0781         TCGA-14-0786         TCGA-14-0787 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-0789         TCGA-14-0790         TCGA-14-0813 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-0817         TCGA-14-0862         TCGA-14-0871 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-1043         TCGA-14-1395         TCGA-14-1450 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-1456         TCGA-14-1823         TCGA-14-1825 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-1829         TCGA-14-2554         TCGA-14-3476 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-14-4157         TCGA-15-0742         TCGA-15-1444 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-16-0846         TCGA-16-0861         TCGA-16-1045 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-16-1048         TCGA-19-1390         TCGA-19-1790 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-2619         TCGA-19-2620         TCGA-19-2623 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-2624         TCGA-19-2625         TCGA-19-2629 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-2631         TCGA-19-4068         TCGA-19-5947 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-5950         TCGA-19-5951         TCGA-19-5952 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-5953         TCGA-19-5954         TCGA-19-5955 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-19-5958         TCGA-19-5959         TCGA-19-5960 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-26-1439         TCGA-26-1442         TCGA-26-5132 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-26-5133         TCGA-26-5134         TCGA-26-5135 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-26-5136         TCGA-26-5139         TCGA-26-6173 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-26-6174         TCGA-27-1830         TCGA-27-1831 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-27-1832         TCGA-27-1833         TCGA-27-1834 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-27-1835         TCGA-27-1836         TCGA-27-1837 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-27-1838         TCGA-27-2518         TCGA-27-2519 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-27-2521         TCGA-27-2523         TCGA-27-2524 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-27-2526         TCGA-27-2527         TCGA-27-2528 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-1747         TCGA-28-1753         TCGA-28-2502 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-2509         TCGA-28-2510         TCGA-28-2513 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-2514         TCGA-28-5204         TCGA-28-5207 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-5208         TCGA-28-5209         TCGA-28-5211 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-5213         TCGA-28-5214         TCGA-28-5215 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-5216         TCGA-28-5218         TCGA-28-5219 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-28-5220         TCGA-28-6450         TCGA-32-1970 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-1977         TCGA-32-1979         TCGA-32-1980 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-1982         TCGA-32-1986         TCGA-32-1991 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-2491         TCGA-32-2494         TCGA-32-2495 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-2615         TCGA-32-2632         TCGA-32-2634 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-2638         TCGA-32-4208         TCGA-32-4209 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-4210         TCGA-32-4211         TCGA-32-4213 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-32-4719         TCGA-32-5222         TCGA-41-2571 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-41-2572         TCGA-41-2573         TCGA-41-2575 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-41-3392         TCGA-41-3393         TCGA-41-3915 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-41-4097         TCGA-41-5651         TCGA-41-6646 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-74-6573         TCGA-74-6577         TCGA-74-6578 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-74-6584         TCGA-76-4925         TCGA-76-4926 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-4927         TCGA-76-4928         TCGA-76-4929 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-4931         TCGA-76-4932         TCGA-76-4934 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-4935         TCGA-76-6191         TCGA-76-6192 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-6193         TCGA-76-6280         TCGA-76-6282 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-6283         TCGA-76-6285         TCGA-76-6286 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-6656         TCGA-76-6657         TCGA-76-6660 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-6661         TCGA-76-6662         TCGA-76-6663 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-76-6664         TCGA-81-5910         TCGA-81-5911 
"SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" "SERPING1 WILD-TYPE" 
        TCGA-87-5896 
"SERPING1 WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPING1 MUTATED        2      2      0
  SERPING1 WILD-TYPE    290    430     62
D63V5, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                2                290
  CLUS_2                2                430
  CLUS_3                0                 62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPING1 MUTATED        1      1      1      1
  SERPING1 WILD-TYPE    152    222     87    160
D63V6, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                1                152
  CLUS_2                1                222
  CLUS_3                1                 87
  CLUS_4                1                160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPING1 MUTATED        2      1      0      1
  SERPING1 WILD-TYPE    183    154    138     94
D63V7, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                2                183
  CLUS_2                1                154
  CLUS_3                0                138
  CLUS_4                1                 94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPING1 MUTATED        3      0      1
  SERPING1 WILD-TYPE    202    220    147
D63V8, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                3                202
  CLUS_2                0                220
  CLUS_3                1                147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPING1 MUTATED        0      2      1
  SERPING1 WILD-TYPE    238    189    227
D63V9, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                0                238
  CLUS_2                2                189
  CLUS_3                1                227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPING1 MUTATED        0      1      2
  SERPING1 WILD-TYPE    196    190    268
D63V10, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                0                196
  CLUS_2                1                190
  CLUS_3                2                268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPING1 MUTATED        0      1      0      2
  SERPING1 WILD-TYPE    140    106     83    180
D63V11, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                0                140
  CLUS_2                1                106
  CLUS_3                0                 83
  CLUS_4                2                180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPING1 MUTATED        1      2      0
  SERPING1 WILD-TYPE    222    184    103
D63V12, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                1                222
  CLUS_2                2                184
  CLUS_3                0                103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPING1 MUTATED        1      0      0      2
  SERPING1 WILD-TYPE    126    119    106    154
D63V13, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                1                126
  CLUS_2                0                119
  CLUS_3                0                106
  CLUS_4                2                154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  SERPING1 MUTATED        1      0      2      0      0      0
  SERPING1 WILD-TYPE     98     77    118     57     63     92
D63V14, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                1                 98
  CLUS_2                0                 77
  CLUS_3                2                118
  CLUS_4                0                 57
  CLUS_5                0                 63
  CLUS_6                0                 92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(64) Variable = RASGRF2 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RASGRF2 MUTATED        1      0      1      0
  RASGRF2 WILD-TYPE     77     41     63     57
D64V1, multiclass
[1] "Remove cluster labels:" "RASGRF2 MUTATED"       
clus
  RASGRF2 MUTATED RASGRF2 WILD-TYPE 
                2               238 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5415        TCGA-06-5417        TCGA-06-5418        TCGA-06-5856 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5858        TCGA-06-5859        TCGA-06-6389        TCGA-06-6390 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-6391        TCGA-08-0386        TCGA-12-0616        TCGA-12-0618 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-0619        TCGA-12-0688        TCGA-12-0692        TCGA-12-0821 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-1597        TCGA-12-3649        TCGA-12-3650        TCGA-12-3652 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-3653        TCGA-12-5295        TCGA-12-5299        TCGA-12-5301 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0871 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5954 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1835        TCGA-27-1836        TCGA-27-1837 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-1838        TCGA-27-2518        TCGA-27-2519        TCGA-27-2521 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2527 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-2528        TCGA-28-1747        TCGA-28-1753        TCGA-28-2501 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-5213        TCGA-28-5214        TCGA-28-5215        TCGA-28-5216 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-5218        TCGA-28-5219        TCGA-28-5220        TCGA-28-6450 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-1970        TCGA-32-1977        TCGA-32-1979        TCGA-32-1980 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-1982        TCGA-32-1986        TCGA-32-1991        TCGA-32-2491 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-2494        TCGA-32-2495        TCGA-32-2615        TCGA-32-2632 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-2634        TCGA-32-2638        TCGA-32-4208        TCGA-32-4209 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-4210        TCGA-32-4211        TCGA-32-4213        TCGA-32-4719 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-5222        TCGA-41-2571        TCGA-41-2572        TCGA-41-2573 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-41-2575        TCGA-41-3392        TCGA-41-3393        TCGA-41-3915 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-41-4097        TCGA-41-5651        TCGA-76-4925        TCGA-76-4926 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-4932        TCGA-76-4934        TCGA-76-4935        TCGA-76-6191 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-6192        TCGA-76-6193        TCGA-76-6282        TCGA-76-6285 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-81-5910        TCGA-87-5896 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RASGRF2 MUTATED        1      0      1      0
  RASGRF2 WILD-TYPE     62     50     47     79
D64V2, multiclass
[1] "Remove cluster labels:" "RASGRF2 MUTATED"       
clus
  RASGRF2 MUTATED RASGRF2 WILD-TYPE 
                2               238 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5415        TCGA-06-5417        TCGA-06-5418        TCGA-06-5856 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5858        TCGA-06-5859        TCGA-06-6389        TCGA-06-6390 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-6391        TCGA-08-0386        TCGA-12-0616        TCGA-12-0618 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-0619        TCGA-12-0688        TCGA-12-0692        TCGA-12-0821 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-1597        TCGA-12-3649        TCGA-12-3650        TCGA-12-3652 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-3653        TCGA-12-5295        TCGA-12-5299        TCGA-12-5301 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0871 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5954 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1835        TCGA-27-1836        TCGA-27-1837 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-1838        TCGA-27-2518        TCGA-27-2519        TCGA-27-2521 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2527 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-2528        TCGA-28-1747        TCGA-28-1753        TCGA-28-2501 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-5213        TCGA-28-5214        TCGA-28-5215        TCGA-28-5216 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-5218        TCGA-28-5219        TCGA-28-5220        TCGA-28-6450 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-1970        TCGA-32-1977        TCGA-32-1979        TCGA-32-1980 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-1982        TCGA-32-1986        TCGA-32-1991        TCGA-32-2491 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-2494        TCGA-32-2495        TCGA-32-2615        TCGA-32-2632 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-2634        TCGA-32-2638        TCGA-32-4208        TCGA-32-4209 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-4210        TCGA-32-4211        TCGA-32-4213        TCGA-32-4719 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-5222        TCGA-41-2571        TCGA-41-2572        TCGA-41-2573 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-41-2575        TCGA-41-3392        TCGA-41-3393        TCGA-41-3915 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-41-4097        TCGA-41-5651        TCGA-76-4925        TCGA-76-4926 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-4932        TCGA-76-4934        TCGA-76-4935        TCGA-76-6191 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-6192        TCGA-76-6193        TCGA-76-6282        TCGA-76-6285 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-81-5910        TCGA-87-5896 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RASGRF2 MUTATED        1      1      0      0
  RASGRF2 WILD-TYPE     69     97     44     63
D64V3, multiclass
[1] "Remove cluster labels:" "RASGRF2 MUTATED"       
clus
  RASGRF2 MUTATED RASGRF2 WILD-TYPE 
                2               273 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-1806        TCGA-06-2557        TCGA-06-2558        TCGA-06-2559 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-2561        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2569        TCGA-06-2570 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-0616        TCGA-12-0618        TCGA-12-0619        TCGA-12-0688 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-0692        TCGA-12-0821        TCGA-12-1597        TCGA-12-3649 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-3650        TCGA-12-3652        TCGA-12-3653        TCGA-12-5295 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-5299        TCGA-12-5301        TCGA-14-0740        TCGA-14-0781 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-0786        TCGA-14-0787        TCGA-14-0789        TCGA-14-0790 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0817        TCGA-14-0862        TCGA-14-0871 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-1043        TCGA-14-1395        TCGA-14-1450        TCGA-14-1456 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-1823        TCGA-14-1825        TCGA-14-1829        TCGA-14-2554 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-3476        TCGA-14-4157        TCGA-15-0742        TCGA-15-1444 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-16-0846        TCGA-16-0861        TCGA-16-1045        TCGA-16-1048 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-1390        TCGA-19-1790        TCGA-19-2619        TCGA-19-2620 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-2623        TCGA-19-2624        TCGA-19-2625        TCGA-19-2629 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-2631        TCGA-19-4068        TCGA-19-5947        TCGA-19-5950 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1830        TCGA-27-1831 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-1832        TCGA-27-1833        TCGA-27-1834        TCGA-27-1835 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-1836        TCGA-27-1837        TCGA-27-1838        TCGA-27-2518 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-2519        TCGA-27-2521        TCGA-27-2523        TCGA-27-2524 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-2526        TCGA-27-2527        TCGA-27-2528        TCGA-28-1747 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-1753        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5207 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5211        TCGA-28-5213        TCGA-28-5214 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-5215        TCGA-28-5216        TCGA-28-5218        TCGA-28-5219 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-5220        TCGA-28-6450        TCGA-32-1970        TCGA-32-1977 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-1979        TCGA-32-1980        TCGA-32-1982        TCGA-32-1986 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-1991        TCGA-32-2491        TCGA-32-2494        TCGA-32-2495 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-2615        TCGA-32-2632        TCGA-32-2634        TCGA-32-2638 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-4208        TCGA-32-4209        TCGA-32-4210        TCGA-32-4211 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-4213        TCGA-32-4719        TCGA-32-5222        TCGA-41-2571 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-41-2572        TCGA-41-2573        TCGA-41-2575        TCGA-41-3392 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-41-3393        TCGA-41-3915        TCGA-41-4097        TCGA-41-5651 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-41-6646        TCGA-74-6573        TCGA-74-6575        TCGA-74-6577 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-74-6578        TCGA-74-6584        TCGA-76-4925        TCGA-76-4926 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-4932        TCGA-76-4934        TCGA-76-4935        TCGA-76-6191 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-6192        TCGA-76-6193        TCGA-76-6280        TCGA-76-6282 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-6283        TCGA-76-6285        TCGA-76-6286        TCGA-76-6656 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-6657        TCGA-76-6660        TCGA-76-6661        TCGA-76-6662 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-6663        TCGA-76-6664        TCGA-81-5910        TCGA-81-5911 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-87-5896 
"RASGRF2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RASGRF2 MUTATED        0      1      1
  RASGRF2 WILD-TYPE    138     60     75
D64V4, multiclass
[1] "Remove cluster labels:" "RASGRF2 MUTATED"       
clus
  RASGRF2 MUTATED RASGRF2 WILD-TYPE 
                2               273 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-1806        TCGA-06-2557        TCGA-06-2558        TCGA-06-2559 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-2561        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2569        TCGA-06-2570 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-0616        TCGA-12-0618        TCGA-12-0619        TCGA-12-0688 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-0692        TCGA-12-0821        TCGA-12-1597        TCGA-12-3649 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-3650        TCGA-12-3652        TCGA-12-3653        TCGA-12-5295 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-12-5299        TCGA-12-5301        TCGA-14-0740        TCGA-14-0781 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-0786        TCGA-14-0787        TCGA-14-0789        TCGA-14-0790 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0817        TCGA-14-0862        TCGA-14-0871 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-1043        TCGA-14-1395        TCGA-14-1450        TCGA-14-1456 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-1823        TCGA-14-1825        TCGA-14-1829        TCGA-14-2554 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-14-3476        TCGA-14-4157        TCGA-15-0742        TCGA-15-1444 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-16-0846        TCGA-16-0861        TCGA-16-1045        TCGA-16-1048 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-1390        TCGA-19-1790        TCGA-19-2619        TCGA-19-2620 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-2623        TCGA-19-2624        TCGA-19-2625        TCGA-19-2629 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-2631        TCGA-19-4068        TCGA-19-5947        TCGA-19-5950 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1830        TCGA-27-1831 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-1832        TCGA-27-1833        TCGA-27-1834        TCGA-27-1835 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-1836        TCGA-27-1837        TCGA-27-1838        TCGA-27-2518 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-2519        TCGA-27-2521        TCGA-27-2523        TCGA-27-2524 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-27-2526        TCGA-27-2527        TCGA-27-2528        TCGA-28-1747 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-1753        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5207 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5211        TCGA-28-5213        TCGA-28-5214 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-5215        TCGA-28-5216        TCGA-28-5218        TCGA-28-5219 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-28-5220        TCGA-28-6450        TCGA-32-1970        TCGA-32-1977 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-1979        TCGA-32-1980        TCGA-32-1982        TCGA-32-1986 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-1991        TCGA-32-2491        TCGA-32-2494        TCGA-32-2495 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-2615        TCGA-32-2632        TCGA-32-2634        TCGA-32-2638 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-4208        TCGA-32-4209        TCGA-32-4210        TCGA-32-4211 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-32-4213        TCGA-32-4719        TCGA-32-5222        TCGA-41-2571 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-41-2572        TCGA-41-2573        TCGA-41-2575        TCGA-41-3392 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-41-3393        TCGA-41-3915        TCGA-41-4097        TCGA-41-5651 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-41-6646        TCGA-74-6573        TCGA-74-6575        TCGA-74-6577 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-74-6578        TCGA-74-6584        TCGA-76-4925        TCGA-76-4926 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-4932        TCGA-76-4934        TCGA-76-4935        TCGA-76-6191 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-6192        TCGA-76-6193        TCGA-76-6280        TCGA-76-6282 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-6283        TCGA-76-6285        TCGA-76-6286        TCGA-76-6656 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-6657        TCGA-76-6660        TCGA-76-6661        TCGA-76-6662 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-76-6663        TCGA-76-6664        TCGA-81-5910        TCGA-81-5911 
"RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" "RASGRF2 WILD-TYPE" 
       TCGA-87-5896 
"RASGRF2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RASGRF2 MUTATED        4      2      0
  RASGRF2 WILD-TYPE    288    430     62
D64V5, multiclass
        clus
vv       RASGRF2 MUTATED RASGRF2 WILD-TYPE
  CLUS_1               4               288
  CLUS_2               2               430
  CLUS_3               0                62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RASGRF2 MUTATED        4      1      0      1
  RASGRF2 WILD-TYPE    149    222     88    160
D64V6, multiclass
        clus
vv       RASGRF2 MUTATED RASGRF2 WILD-TYPE
  CLUS_1               4               149
  CLUS_2               1               222
  CLUS_3               0                88
  CLUS_4               1               160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RASGRF2 MUTATED        2      1      1      0
  RASGRF2 WILD-TYPE    183    154    137     95
D64V7, multiclass
        clus
vv       RASGRF2 MUTATED RASGRF2 WILD-TYPE
  CLUS_1               2               183
  CLUS_2               1               154
  CLUS_3               1               137
  CLUS_4               0                95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RASGRF2 MUTATED        1      2      1
  RASGRF2 WILD-TYPE    204    218    147
D64V8, multiclass
        clus
vv       RASGRF2 MUTATED RASGRF2 WILD-TYPE
  CLUS_1               1               204
  CLUS_2               2               218
  CLUS_3               1               147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RASGRF2 MUTATED        4      1      1
  RASGRF2 WILD-TYPE    234    190    227
D64V9, multiclass
        clus
vv       RASGRF2 MUTATED RASGRF2 WILD-TYPE
  CLUS_1               4               234
  CLUS_2               1               190
  CLUS_3               1               227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RASGRF2 MUTATED        3      1      2
  RASGRF2 WILD-TYPE    193    190    268
D64V10, multiclass
        clus
vv       RASGRF2 MUTATED RASGRF2 WILD-TYPE
  CLUS_1               3               193
  CLUS_2               1               190
  CLUS_3               2               268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RASGRF2 MUTATED        0      3      0      1
  RASGRF2 WILD-TYPE    140    104     83    181
D64V11, multiclass
        clus
vv       RASGRF2 MUTATED RASGRF2 WILD-TYPE
  CLUS_1               0               140
  CLUS_2               3               104
  CLUS_3               0                83
  CLUS_4               1               181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RASGRF2 MUTATED        0      1      3
  RASGRF2 WILD-TYPE    223    185    100
D64V12, multiclass
        clus
vv       RASGRF2 MUTATED RASGRF2 WILD-TYPE
  CLUS_1               0               223
  CLUS_2               1               185
  CLUS_3               3               100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RASGRF2 MUTATED        0      1      2      1
  RASGRF2 WILD-TYPE    127    118    104    155
D64V13, multiclass
        clus
vv       RASGRF2 MUTATED RASGRF2 WILD-TYPE
  CLUS_1               0               127
  CLUS_2               1               118
  CLUS_3               2               104
  CLUS_4               1               155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  RASGRF2 MUTATED        0      0      0      0      1      3
  RASGRF2 WILD-TYPE     99     77    120     57     62     89
D64V14, multiclass
        clus
vv       RASGRF2 MUTATED RASGRF2 WILD-TYPE
  CLUS_1               0                99
  CLUS_2               0                77
  CLUS_3               0               120
  CLUS_4               0                57
  CLUS_5               1                62
  CLUS_6               3                89
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(65) Variable = FAM83D MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM83D MUTATED        0      1      0      0
  FAM83D WILD-TYPE     78     40     64     57
D65V1, multiclass
[1] "Remove cluster labels:" "FAM83D MUTATED"        
clus
  FAM83D MUTATED FAM83D WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2629       TCGA-19-2631       TCGA-19-4068 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-26-5139       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-2501       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5213       TCGA-28-5214 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-76-4925 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM83D MUTATED        0      1      0      0
  FAM83D WILD-TYPE     63     49     48     79
D65V2, multiclass
[1] "Remove cluster labels:" "FAM83D MUTATED"        
clus
  FAM83D MUTATED FAM83D WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2629       TCGA-19-2631       TCGA-19-4068 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-26-5139       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-2501       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5213       TCGA-28-5214 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-76-4925 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM83D MUTATED        1      1      0      0
  FAM83D WILD-TYPE     69     97     44     63
D65V3, multiclass
[1] "Remove cluster labels:" "FAM83D MUTATED"        
clus
  FAM83D MUTATED FAM83D WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0862 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-87-5896 
"FAM83D WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM83D MUTATED        2      0      0
  FAM83D WILD-TYPE    136     61     76
D65V4, multiclass
[1] "Remove cluster labels:" "FAM83D MUTATED"        
clus
  FAM83D MUTATED FAM83D WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0862 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" "FAM83D WILD-TYPE" 
      TCGA-87-5896 
"FAM83D WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM83D MUTATED        4      2      0
  FAM83D WILD-TYPE    288    430     62
D65V5, multiclass
        clus
vv       FAM83D MUTATED FAM83D WILD-TYPE
  CLUS_1              4              288
  CLUS_2              2              430
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM83D MUTATED        4      1      0      1
  FAM83D WILD-TYPE    149    222     88    160
D65V6, multiclass
        clus
vv       FAM83D MUTATED FAM83D WILD-TYPE
  CLUS_1              4              149
  CLUS_2              1              222
  CLUS_3              0               88
  CLUS_4              1              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM83D MUTATED        1      2      0      1
  FAM83D WILD-TYPE    184    153    138     94
D65V7, multiclass
        clus
vv       FAM83D MUTATED FAM83D WILD-TYPE
  CLUS_1              1              184
  CLUS_2              2              153
  CLUS_3              0              138
  CLUS_4              1               94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM83D MUTATED        2      2      0
  FAM83D WILD-TYPE    203    218    148
D65V8, multiclass
        clus
vv       FAM83D MUTATED FAM83D WILD-TYPE
  CLUS_1              2              203
  CLUS_2              2              218
  CLUS_3              0              148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM83D MUTATED        3      1      1
  FAM83D WILD-TYPE    235    190    227
D65V9, multiclass
        clus
vv       FAM83D MUTATED FAM83D WILD-TYPE
  CLUS_1              3              235
  CLUS_2              1              190
  CLUS_3              1              227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM83D MUTATED        2      2      1
  FAM83D WILD-TYPE    194    189    269
D65V10, multiclass
        clus
vv       FAM83D MUTATED FAM83D WILD-TYPE
  CLUS_1              2              194
  CLUS_2              2              189
  CLUS_3              1              269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM83D MUTATED        1      2      0      1
  FAM83D WILD-TYPE    139    105     83    181
D65V11, multiclass
        clus
vv       FAM83D MUTATED FAM83D WILD-TYPE
  CLUS_1              1              139
  CLUS_2              2              105
  CLUS_3              0               83
  CLUS_4              1              181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM83D MUTATED        0      1      3
  FAM83D WILD-TYPE    223    185    100
D65V12, multiclass
        clus
vv       FAM83D MUTATED FAM83D WILD-TYPE
  CLUS_1              0              223
  CLUS_2              1              185
  CLUS_3              3              100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM83D MUTATED        0      1      1      2
  FAM83D WILD-TYPE    127    118    105    154
D65V13, multiclass
        clus
vv       FAM83D MUTATED FAM83D WILD-TYPE
  CLUS_1              0              127
  CLUS_2              1              118
  CLUS_3              1              105
  CLUS_4              2              154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  FAM83D MUTATED        0      0      0      0      1      3
  FAM83D WILD-TYPE     99     77    120     57     62     89
D65V14, multiclass
        clus
vv       FAM83D MUTATED FAM83D WILD-TYPE
  CLUS_1              0               99
  CLUS_2              0               77
  CLUS_3              0              120
  CLUS_4              0               57
  CLUS_5              1               62
  CLUS_6              3               89
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(66) Variable = ZNF512B MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF512B MUTATED        0      0      0      0
  ZNF512B WILD-TYPE     78     41     64     57
D66V1, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF512B MUTATED        0      0      0      0
  ZNF512B WILD-TYPE     63     50     48     79
D66V2, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF512B MUTATED        0      0      0      0
  ZNF512B WILD-TYPE     70     98     44     63
D66V3, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZNF512B MUTATED        0      0      0
  ZNF512B WILD-TYPE    138     61     76
D66V4, multiclass
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZNF512B MUTATED        1      4      0
  ZNF512B WILD-TYPE    291    428     62
D66V5, multiclass
        clus
vv       ZNF512B MUTATED ZNF512B WILD-TYPE
  CLUS_1               1               291
  CLUS_2               4               428
  CLUS_3               0                62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF512B MUTATED        1      3      0      1
  ZNF512B WILD-TYPE    152    220     88    160
D66V6, multiclass
        clus
vv       ZNF512B MUTATED ZNF512B WILD-TYPE
  CLUS_1               1               152
  CLUS_2               3               220
  CLUS_3               0                88
  CLUS_4               1               160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF512B MUTATED        2      2      0      1
  ZNF512B WILD-TYPE    183    153    138     94
D66V7, multiclass
        clus
vv       ZNF512B MUTATED ZNF512B WILD-TYPE
  CLUS_1               2               183
  CLUS_2               2               153
  CLUS_3               0               138
  CLUS_4               1                94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZNF512B MUTATED        2      2      1
  ZNF512B WILD-TYPE    203    218    147
D66V8, multiclass
        clus
vv       ZNF512B MUTATED ZNF512B WILD-TYPE
  CLUS_1               2               203
  CLUS_2               2               218
  CLUS_3               1               147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZNF512B MUTATED        1      2      2
  ZNF512B WILD-TYPE    237    189    226
D66V9, multiclass
        clus
vv       ZNF512B MUTATED ZNF512B WILD-TYPE
  CLUS_1               1               237
  CLUS_2               2               189
  CLUS_3               2               226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZNF512B MUTATED        0      2      3
  ZNF512B WILD-TYPE    196    189    267
D66V10, multiclass
        clus
vv       ZNF512B MUTATED ZNF512B WILD-TYPE
  CLUS_1               0               196
  CLUS_2               2               189
  CLUS_3               3               267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF512B MUTATED        1      1      1      2
  ZNF512B WILD-TYPE    139    106     82    180
D66V11, multiclass
        clus
vv       ZNF512B MUTATED ZNF512B WILD-TYPE
  CLUS_1               1               139
  CLUS_2               1               106
  CLUS_3               1                82
  CLUS_4               2               180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZNF512B MUTATED        2      2      1
  ZNF512B WILD-TYPE    221    184    102
D66V12, multiclass
        clus
vv       ZNF512B MUTATED ZNF512B WILD-TYPE
  CLUS_1               2               221
  CLUS_2               2               184
  CLUS_3               1               102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF512B MUTATED        0      1      1      3
  ZNF512B WILD-TYPE    127    118    105    153
D66V13, multiclass
        clus
vv       ZNF512B MUTATED ZNF512B WILD-TYPE
  CLUS_1               0               127
  CLUS_2               1               118
  CLUS_3               1               105
  CLUS_4               3               153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  ZNF512B MUTATED        1      0      2      0      0      2
  ZNF512B WILD-TYPE     98     77    118     57     63     90
D66V14, multiclass
        clus
vv       ZNF512B MUTATED ZNF512B WILD-TYPE
  CLUS_1               1                98
  CLUS_2               0                77
  CLUS_3               2               118
  CLUS_4               0                57
  CLUS_5               0                63
  CLUS_6               2                90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(67) Variable = ATF7IP2 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATF7IP2 MUTATED        2      0      1      1
  ATF7IP2 WILD-TYPE     76     41     63     56
D67V1, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               2                76
  CLUS_2               0                41
  CLUS_3               1                63
  CLUS_4               1                56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATF7IP2 MUTATED        1      1      1      1
  ATF7IP2 WILD-TYPE     62     49     47     78
D67V2, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               1                62
  CLUS_2               1                49
  CLUS_3               1                47
  CLUS_4               1                78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATF7IP2 MUTATED        1      1      0      3
  ATF7IP2 WILD-TYPE     69     97     44     60
D67V3, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               1                69
  CLUS_2               1                97
  CLUS_3               0                44
  CLUS_4               3                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ATF7IP2 MUTATED        1      3      1
  ATF7IP2 WILD-TYPE    137     58     75
D67V4, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               1               137
  CLUS_2               3                58
  CLUS_3               1                75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ATF7IP2 MUTATED        6      1      1
  ATF7IP2 WILD-TYPE    286    431     61
D67V5, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               6               286
  CLUS_2               1               431
  CLUS_3               1                61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATF7IP2 MUTATED        2      1      1      0
  ATF7IP2 WILD-TYPE    151    222     87    161
D67V6, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               2               151
  CLUS_2               1               222
  CLUS_3               1                87
  CLUS_4               0               161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATF7IP2 MUTATED        2      2      0      1
  ATF7IP2 WILD-TYPE    183    153    138     94
D67V7, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               2               183
  CLUS_2               2               153
  CLUS_3               0               138
  CLUS_4               1                94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ATF7IP2 MUTATED        2      2      1
  ATF7IP2 WILD-TYPE    203    218    147
D67V8, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               2               203
  CLUS_2               2               218
  CLUS_3               1               147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ATF7IP2 MUTATED        4      0      0
  ATF7IP2 WILD-TYPE    234    191    228
D67V9, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               4               234
  CLUS_2               0               191
  CLUS_3               0               228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ATF7IP2 MUTATED        3      1      0
  ATF7IP2 WILD-TYPE    193    190    270
D67V10, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               3               193
  CLUS_2               1               190
  CLUS_3               0               270
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATF7IP2 MUTATED        1      1      0      1
  ATF7IP2 WILD-TYPE    139    106     83    181
D67V11, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               1               139
  CLUS_2               1               106
  CLUS_3               0                83
  CLUS_4               1               181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ATF7IP2 MUTATED        0      0      3
  ATF7IP2 WILD-TYPE    223    186    100
D67V12, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               0               223
  CLUS_2               0               186
  CLUS_3               3               100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATF7IP2 MUTATED        0      3      0      0
  ATF7IP2 WILD-TYPE    127    116    106    156
D67V13, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               0               127
  CLUS_2               3               116
  CLUS_3               0               106
  CLUS_4               0               156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  ATF7IP2 MUTATED        1      0      0      0      2      0
  ATF7IP2 WILD-TYPE     98     77    120     57     61     92
D67V14, multiclass
        clus
vv       ATF7IP2 MUTATED ATF7IP2 WILD-TYPE
  CLUS_1               1                98
  CLUS_2               0                77
  CLUS_3               0               120
  CLUS_4               0                57
  CLUS_5               2                61
  CLUS_6               0                92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(68) Variable = TPX2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TPX2 MUTATED        0      0      1      0
  TPX2 WILD-TYPE     78     41     63     57
D68V1, multiclass
[1] "Remove cluster labels:" "TPX2 MUTATED"          
clus
  TPX2 MUTATED TPX2 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TPX2 MUTATED        0      0      0      1
  TPX2 WILD-TYPE     63     50     48     78
D68V2, multiclass
[1] "Remove cluster labels:" "TPX2 MUTATED"          
clus
  TPX2 MUTATED TPX2 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TPX2 MUTATED        0      0      1      1
  TPX2 WILD-TYPE     70     98     43     62
D68V3, multiclass
[1] "Remove cluster labels:" "TPX2 MUTATED"          
clus
  TPX2 MUTATED TPX2 WILD-TYPE 
             2            273 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5417     TCGA-06-5418 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-87-5896 
"TPX2 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TPX2 MUTATED        1      1      0
  TPX2 WILD-TYPE    137     60     76
D68V4, multiclass
[1] "Remove cluster labels:" "TPX2 MUTATED"          
clus
  TPX2 MUTATED TPX2 WILD-TYPE 
             2            273 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5417     TCGA-06-5418 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" "TPX2 WILD-TYPE" 
    TCGA-87-5896 
"TPX2 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TPX2 MUTATED        3      4      0
  TPX2 WILD-TYPE    289    428     62
D68V5, multiclass
        clus
vv       TPX2 MUTATED TPX2 WILD-TYPE
  CLUS_1            3            289
  CLUS_2            4            428
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TPX2 MUTATED        3      3      0      1
  TPX2 WILD-TYPE    150    220     88    160
D68V6, multiclass
        clus
vv       TPX2 MUTATED TPX2 WILD-TYPE
  CLUS_1            3            150
  CLUS_2            3            220
  CLUS_3            0             88
  CLUS_4            1            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TPX2 MUTATED        1      2      1      0
  TPX2 WILD-TYPE    184    153    137     95
D68V7, multiclass
        clus
vv       TPX2 MUTATED TPX2 WILD-TYPE
  CLUS_1            1            184
  CLUS_2            2            153
  CLUS_3            1            137
  CLUS_4            0             95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TPX2 MUTATED        1      2      1
  TPX2 WILD-TYPE    204    218    147
D68V8, multiclass
        clus
vv       TPX2 MUTATED TPX2 WILD-TYPE
  CLUS_1            1            204
  CLUS_2            2            218
  CLUS_3            1            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TPX2 MUTATED        2      2      2
  TPX2 WILD-TYPE    236    189    226
D68V9, multiclass
        clus
vv       TPX2 MUTATED TPX2 WILD-TYPE
  CLUS_1            2            236
  CLUS_2            2            189
  CLUS_3            2            226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TPX2 MUTATED        1      3      2
  TPX2 WILD-TYPE    195    188    268
D68V10, multiclass
        clus
vv       TPX2 MUTATED TPX2 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            3            188
  CLUS_3            2            268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TPX2 MUTATED        0      1      1      3
  TPX2 WILD-TYPE    140    106     82    179
D68V11, multiclass
        clus
vv       TPX2 MUTATED TPX2 WILD-TYPE
  CLUS_1            0            140
  CLUS_2            1            106
  CLUS_3            1             82
  CLUS_4            3            179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TPX2 MUTATED        0      4      1
  TPX2 WILD-TYPE    223    182    102
D68V12, multiclass
        clus
vv       TPX2 MUTATED TPX2 WILD-TYPE
  CLUS_1            0            223
  CLUS_2            4            182
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TPX2 MUTATED        0      0      1      4
  TPX2 WILD-TYPE    127    119    105    152
D68V13, multiclass
        clus
vv       TPX2 MUTATED TPX2 WILD-TYPE
  CLUS_1            0            127
  CLUS_2            0            119
  CLUS_3            1            105
  CLUS_4            4            152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  TPX2 MUTATED        0      0      2      1      0      2
  TPX2 WILD-TYPE     99     77    118     56     63     90
D68V14, multiclass
        clus
vv       TPX2 MUTATED TPX2 WILD-TYPE
  CLUS_1            0             99
  CLUS_2            0             77
  CLUS_3            2            118
  CLUS_4            1             56
  CLUS_5            0             63
  CLUS_6            2             90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(69) Variable = ZBTB20 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB20 MUTATED        0      0      0      1
  ZBTB20 WILD-TYPE     78     41     64     56
D69V1, multiclass
[1] "Remove cluster labels:" "ZBTB20 MUTATED"        
clus
  ZBTB20 MUTATED ZBTB20 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0137       TCGA-06-0139       TCGA-06-0140 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0142       TCGA-06-0145       TCGA-06-0152 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0154       TCGA-06-0155       TCGA-06-0157       TCGA-06-0158 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0166       TCGA-06-0167       TCGA-06-0168       TCGA-06-0169 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB20 MUTATED        0      0      0      1
  ZBTB20 WILD-TYPE     63     50     48     78
D69V2, multiclass
[1] "Remove cluster labels:" "ZBTB20 MUTATED"        
clus
  ZBTB20 MUTATED ZBTB20 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0137       TCGA-06-0139       TCGA-06-0140 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0142       TCGA-06-0145       TCGA-06-0152 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0154       TCGA-06-0155       TCGA-06-0157       TCGA-06-0158 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0166       TCGA-06-0167       TCGA-06-0168       TCGA-06-0169 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" "ZBTB20 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB20 MUTATED        0      0      0      0
  ZBTB20 WILD-TYPE     70     98     44     63
D69V3, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB20 MUTATED        0      0      0
  ZBTB20 WILD-TYPE    138     61     76
D69V4, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB20 MUTATED        1     20      1
  ZBTB20 WILD-TYPE    291    412     61
D69V5, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              1              291
  CLUS_2             20              412
  CLUS_3              1               61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB20 MUTATED        2      3      1     15
  ZBTB20 WILD-TYPE    151    220     87    146
D69V6, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              2              151
  CLUS_2              3              220
  CLUS_3              1               87
  CLUS_4             15              146
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB20 MUTATED        5      6      2      3
  ZBTB20 WILD-TYPE    180    149    136     92
D69V7, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              5              180
  CLUS_2              6              149
  CLUS_3              2              136
  CLUS_4              3               92
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB20 MUTATED        3      5      8
  ZBTB20 WILD-TYPE    202    215    140
D69V8, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              3              202
  CLUS_2              5              215
  CLUS_3              8              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB20 MUTATED        3     16      3
  ZBTB20 WILD-TYPE    235    175    225
D69V9, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              3              235
  CLUS_2             16              175
  CLUS_3              3              225
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB20 MUTATED        0      3     19
  ZBTB20 WILD-TYPE    196    188    251
D69V10, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              0              196
  CLUS_2              3              188
  CLUS_3             19              251
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB20 MUTATED        3      2      4     12
  ZBTB20 WILD-TYPE    137    105     79    170
D69V11, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              3              137
  CLUS_2              2              105
  CLUS_3              4               79
  CLUS_4             12              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB20 MUTATED        5     14      2
  ZBTB20 WILD-TYPE    218    172    101
D69V12, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              5              218
  CLUS_2             14              172
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB20 MUTATED        3      1      4     13
  ZBTB20 WILD-TYPE    124    118    102    143
D69V13, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              3              124
  CLUS_2              1              118
  CLUS_3              4              102
  CLUS_4             13              143
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  ZBTB20 MUTATED        1      4      9      1      1      5
  ZBTB20 WILD-TYPE     98     73    111     56     62     87
D69V14, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              1               98
  CLUS_2              4               73
  CLUS_3              9              111
  CLUS_4              1               56
  CLUS_5              1               62
  CLUS_6              5               87
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(70) Variable = C10ORF76 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C10ORF76 MUTATED        0      0      0      1
  C10ORF76 WILD-TYPE     78     41     64     56
D70V1, multiclass
[1] "Remove cluster labels:" "C10ORF76 MUTATED"      
clus
  C10ORF76 MUTATED C10ORF76 WILD-TYPE 
                 1                239 
        TCGA-02-0003         TCGA-02-0033         TCGA-02-0047 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-02-2470         TCGA-02-2483         TCGA-02-2485 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-02-2486         TCGA-06-0122         TCGA-06-0124 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0126         TCGA-06-0128         TCGA-06-0129 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0130         TCGA-06-0132         TCGA-06-0137 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0139         TCGA-06-0140         TCGA-06-0141 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0142         TCGA-06-0145         TCGA-06-0152 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0154         TCGA-06-0155         TCGA-06-0157 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0158         TCGA-06-0166         TCGA-06-0167 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0168         TCGA-06-0169         TCGA-06-0173 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0174         TCGA-06-0178         TCGA-06-0184 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0185         TCGA-06-0188         TCGA-06-0189 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0192         TCGA-06-0195         TCGA-06-0213 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0214         TCGA-06-0216         TCGA-06-0219 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0237         TCGA-06-0238         TCGA-06-0240 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0241         TCGA-06-0644         TCGA-06-0645 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0646         TCGA-06-0648         TCGA-06-0649 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0650         TCGA-06-0686         TCGA-06-0743 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0744         TCGA-06-0745         TCGA-06-0747 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0749         TCGA-06-0750         TCGA-06-0875 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0876         TCGA-06-0877         TCGA-06-0878 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0879         TCGA-06-0881         TCGA-06-0882 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0939         TCGA-06-1804         TCGA-06-2557 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-2558         TCGA-06-2559         TCGA-06-2561 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-2562         TCGA-06-2563         TCGA-06-2564 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-2565         TCGA-06-2567         TCGA-06-2569 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-2570         TCGA-06-5408         TCGA-06-5410 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5411         TCGA-06-5412         TCGA-06-5413 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5414         TCGA-06-5415         TCGA-06-5417 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5418         TCGA-06-5856         TCGA-06-5858 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5859         TCGA-06-6389         TCGA-06-6390 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-6391         TCGA-08-0386         TCGA-12-0616 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-0618         TCGA-12-0619         TCGA-12-0688 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-0692         TCGA-12-0821         TCGA-12-1597 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-3649         TCGA-12-3650         TCGA-12-3652 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-3653         TCGA-12-5295         TCGA-12-5299 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-5301         TCGA-14-0781         TCGA-14-0786 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-0787         TCGA-14-0789         TCGA-14-0790 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-0813         TCGA-14-0817         TCGA-14-0871 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-1456         TCGA-14-1823         TCGA-14-1825 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-1829         TCGA-14-2554         TCGA-14-3476 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-4157         TCGA-15-0742         TCGA-15-1444 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-16-0846         TCGA-16-0861         TCGA-16-1045 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-16-1048         TCGA-19-1390         TCGA-19-1790 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-2619         TCGA-19-2620         TCGA-19-2623 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-2624         TCGA-19-2625         TCGA-19-2629 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-2631         TCGA-19-4068         TCGA-19-5947 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-5950         TCGA-19-5951         TCGA-19-5952 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-5954         TCGA-19-5955         TCGA-19-5958 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-5959         TCGA-26-1439         TCGA-26-1442 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-26-5132         TCGA-26-5133         TCGA-26-5134 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-26-5135         TCGA-26-5136         TCGA-26-5139 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-1830         TCGA-27-1831         TCGA-27-1832 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-1833         TCGA-27-1834         TCGA-27-1835 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-1836         TCGA-27-1837         TCGA-27-1838 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-2518         TCGA-27-2519         TCGA-27-2521 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-2523         TCGA-27-2524         TCGA-27-2526 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-2527         TCGA-27-2528         TCGA-28-1747 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-1753         TCGA-28-2501         TCGA-28-2502 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-2509         TCGA-28-2510         TCGA-28-2513 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-2514         TCGA-28-5204         TCGA-28-5207 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-5208         TCGA-28-5209         TCGA-28-5213 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-5214         TCGA-28-5215         TCGA-28-5216 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-5218         TCGA-28-5219         TCGA-28-5220 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-6450         TCGA-32-1970         TCGA-32-1977 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-1979         TCGA-32-1980         TCGA-32-1982 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-1986         TCGA-32-1991         TCGA-32-2491 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-2494         TCGA-32-2495         TCGA-32-2615 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-2632         TCGA-32-2634         TCGA-32-2638 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-4208         TCGA-32-4209         TCGA-32-4210 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-4211         TCGA-32-4213         TCGA-32-4719 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-5222         TCGA-41-2571         TCGA-41-2572 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-41-2573         TCGA-41-2575         TCGA-41-3392 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-41-3393         TCGA-41-3915         TCGA-41-4097 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-41-5651         TCGA-76-4925         TCGA-76-4926 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-4927         TCGA-76-4928         TCGA-76-4929 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-4931         TCGA-76-4932         TCGA-76-4934 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-4935         TCGA-76-6191         TCGA-76-6192 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-6193         TCGA-76-6282         TCGA-76-6285 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-81-5910         TCGA-87-5896 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C10ORF76 MUTATED        0      1      0      0
  C10ORF76 WILD-TYPE     63     49     48     79
D70V2, multiclass
[1] "Remove cluster labels:" "C10ORF76 MUTATED"      
clus
  C10ORF76 MUTATED C10ORF76 WILD-TYPE 
                 1                239 
        TCGA-02-0003         TCGA-02-0033         TCGA-02-0047 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-02-2470         TCGA-02-2483         TCGA-02-2485 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-02-2486         TCGA-06-0122         TCGA-06-0124 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0126         TCGA-06-0128         TCGA-06-0129 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0130         TCGA-06-0132         TCGA-06-0137 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0139         TCGA-06-0140         TCGA-06-0141 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0142         TCGA-06-0145         TCGA-06-0152 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0154         TCGA-06-0155         TCGA-06-0157 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0158         TCGA-06-0166         TCGA-06-0167 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0168         TCGA-06-0169         TCGA-06-0173 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0174         TCGA-06-0178         TCGA-06-0184 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0185         TCGA-06-0188         TCGA-06-0189 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0192         TCGA-06-0195         TCGA-06-0213 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0214         TCGA-06-0216         TCGA-06-0219 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0237         TCGA-06-0238         TCGA-06-0240 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0241         TCGA-06-0644         TCGA-06-0645 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0646         TCGA-06-0648         TCGA-06-0649 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0650         TCGA-06-0686         TCGA-06-0743 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0744         TCGA-06-0745         TCGA-06-0747 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0749         TCGA-06-0750         TCGA-06-0875 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0876         TCGA-06-0877         TCGA-06-0878 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0879         TCGA-06-0881         TCGA-06-0882 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0939         TCGA-06-1804         TCGA-06-2557 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-2558         TCGA-06-2559         TCGA-06-2561 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-2562         TCGA-06-2563         TCGA-06-2564 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-2565         TCGA-06-2567         TCGA-06-2569 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-2570         TCGA-06-5408         TCGA-06-5410 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5411         TCGA-06-5412         TCGA-06-5413 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5414         TCGA-06-5415         TCGA-06-5417 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5418         TCGA-06-5856         TCGA-06-5858 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5859         TCGA-06-6389         TCGA-06-6390 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-6391         TCGA-08-0386         TCGA-12-0616 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-0618         TCGA-12-0619         TCGA-12-0688 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-0692         TCGA-12-0821         TCGA-12-1597 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-3649         TCGA-12-3650         TCGA-12-3652 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-3653         TCGA-12-5295         TCGA-12-5299 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-5301         TCGA-14-0781         TCGA-14-0786 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-0787         TCGA-14-0789         TCGA-14-0790 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-0813         TCGA-14-0817         TCGA-14-0871 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-1456         TCGA-14-1823         TCGA-14-1825 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-1829         TCGA-14-2554         TCGA-14-3476 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-4157         TCGA-15-0742         TCGA-15-1444 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-16-0846         TCGA-16-0861         TCGA-16-1045 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-16-1048         TCGA-19-1390         TCGA-19-1790 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-2619         TCGA-19-2620         TCGA-19-2623 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-2624         TCGA-19-2625         TCGA-19-2629 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-2631         TCGA-19-4068         TCGA-19-5947 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-5950         TCGA-19-5951         TCGA-19-5952 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-5954         TCGA-19-5955         TCGA-19-5958 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-5959         TCGA-26-1439         TCGA-26-1442 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-26-5132         TCGA-26-5133         TCGA-26-5134 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-26-5135         TCGA-26-5136         TCGA-26-5139 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-1830         TCGA-27-1831         TCGA-27-1832 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-1833         TCGA-27-1834         TCGA-27-1835 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-1836         TCGA-27-1837         TCGA-27-1838 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-2518         TCGA-27-2519         TCGA-27-2521 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-2523         TCGA-27-2524         TCGA-27-2526 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-2527         TCGA-27-2528         TCGA-28-1747 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-1753         TCGA-28-2501         TCGA-28-2502 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-2509         TCGA-28-2510         TCGA-28-2513 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-2514         TCGA-28-5204         TCGA-28-5207 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-5208         TCGA-28-5209         TCGA-28-5213 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-5214         TCGA-28-5215         TCGA-28-5216 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-5218         TCGA-28-5219         TCGA-28-5220 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-6450         TCGA-32-1970         TCGA-32-1977 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-1979         TCGA-32-1980         TCGA-32-1982 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-1986         TCGA-32-1991         TCGA-32-2491 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-2494         TCGA-32-2495         TCGA-32-2615 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-2632         TCGA-32-2634         TCGA-32-2638 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-4208         TCGA-32-4209         TCGA-32-4210 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-4211         TCGA-32-4213         TCGA-32-4719 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-5222         TCGA-41-2571         TCGA-41-2572 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-41-2573         TCGA-41-2575         TCGA-41-3392 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-41-3393         TCGA-41-3915         TCGA-41-4097 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-41-5651         TCGA-76-4925         TCGA-76-4926 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-4927         TCGA-76-4928         TCGA-76-4929 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-4931         TCGA-76-4932         TCGA-76-4934 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-4935         TCGA-76-6191         TCGA-76-6192 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-6193         TCGA-76-6282         TCGA-76-6285 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-81-5910         TCGA-87-5896 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C10ORF76 MUTATED        0      1      0      0
  C10ORF76 WILD-TYPE     70     97     44     63
D70V3, multiclass
[1] "Remove cluster labels:" "C10ORF76 MUTATED"      
clus
  C10ORF76 MUTATED C10ORF76 WILD-TYPE 
                 1                274 
        TCGA-02-0003         TCGA-02-0033         TCGA-02-0047 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-02-0055         TCGA-02-2470         TCGA-02-2483 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-02-2485         TCGA-02-2486         TCGA-06-0122 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0124         TCGA-06-0126         TCGA-06-0128 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0129         TCGA-06-0130         TCGA-06-0137 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0139         TCGA-06-0140         TCGA-06-0141 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0142         TCGA-06-0145         TCGA-06-0151 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0152         TCGA-06-0154         TCGA-06-0155 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0157         TCGA-06-0158         TCGA-06-0166 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0168         TCGA-06-0169         TCGA-06-0173 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0174         TCGA-06-0178         TCGA-06-0184 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0185         TCGA-06-0188         TCGA-06-0189 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0192         TCGA-06-0195         TCGA-06-0213 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0214         TCGA-06-0216         TCGA-06-0219 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0237         TCGA-06-0238         TCGA-06-0240 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0241         TCGA-06-0644         TCGA-06-0645 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0646         TCGA-06-0648         TCGA-06-0649 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0650         TCGA-06-0686         TCGA-06-0743 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0744         TCGA-06-0745         TCGA-06-0747 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0749         TCGA-06-0750         TCGA-06-0875 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0876         TCGA-06-0877         TCGA-06-0878 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0879         TCGA-06-0881         TCGA-06-0882 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0939         TCGA-06-1804         TCGA-06-1806 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-2557         TCGA-06-2558         TCGA-06-2559 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-2561         TCGA-06-2562         TCGA-06-2563 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-2564         TCGA-06-2565         TCGA-06-2567 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-2569         TCGA-06-2570         TCGA-06-5408 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5410         TCGA-06-5411         TCGA-06-5412 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5413         TCGA-06-5414         TCGA-06-5415 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5417         TCGA-06-5418         TCGA-06-5856 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5858         TCGA-06-5859         TCGA-06-6388 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-6389         TCGA-06-6390         TCGA-06-6391 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-6693         TCGA-06-6694         TCGA-06-6695 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-6697         TCGA-06-6698         TCGA-06-6699 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-6700         TCGA-06-6701         TCGA-08-0386 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-0616         TCGA-12-0618         TCGA-12-0619 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-0688         TCGA-12-0692         TCGA-12-0821 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-1597         TCGA-12-3649         TCGA-12-3650 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-3652         TCGA-12-3653         TCGA-12-5295 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-5299         TCGA-12-5301         TCGA-14-0740 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-0781         TCGA-14-0786         TCGA-14-0787 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-0789         TCGA-14-0790         TCGA-14-0813 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-0817         TCGA-14-0862         TCGA-14-0871 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-1043         TCGA-14-1395         TCGA-14-1450 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-1456         TCGA-14-1823         TCGA-14-1825 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-1829         TCGA-14-2554         TCGA-14-3476 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-4157         TCGA-15-0742         TCGA-15-1444 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-16-0846         TCGA-16-0861         TCGA-16-1045 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-16-1048         TCGA-19-1390         TCGA-19-1790 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-2619         TCGA-19-2620         TCGA-19-2623 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-2624         TCGA-19-2625         TCGA-19-2629 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-2631         TCGA-19-4068         TCGA-19-5947 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-5950         TCGA-19-5951         TCGA-19-5952 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-5953         TCGA-19-5954         TCGA-19-5955 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-5958         TCGA-19-5959         TCGA-26-1439 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-26-1442         TCGA-26-5132         TCGA-26-5133 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-26-5134         TCGA-26-5135         TCGA-26-5136 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-26-5139         TCGA-26-6173         TCGA-26-6174 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-1830         TCGA-27-1831         TCGA-27-1832 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-1833         TCGA-27-1834         TCGA-27-1835 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-1836         TCGA-27-1837         TCGA-27-1838 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-2518         TCGA-27-2519         TCGA-27-2521 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-2523         TCGA-27-2524         TCGA-27-2526 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-2527         TCGA-27-2528         TCGA-28-1747 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-1753         TCGA-28-2502         TCGA-28-2509 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-2510         TCGA-28-2513         TCGA-28-2514 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-5204         TCGA-28-5207         TCGA-28-5208 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-5209         TCGA-28-5211         TCGA-28-5213 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-5214         TCGA-28-5215         TCGA-28-5216 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-5218         TCGA-28-5219         TCGA-28-5220 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-6450         TCGA-32-1970         TCGA-32-1977 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-1979         TCGA-32-1980         TCGA-32-1982 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-1986         TCGA-32-1991         TCGA-32-2491 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-2494         TCGA-32-2495         TCGA-32-2615 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-2632         TCGA-32-2634         TCGA-32-2638 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-4208         TCGA-32-4209         TCGA-32-4210 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-4211         TCGA-32-4213         TCGA-32-4719 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-5222         TCGA-41-2571         TCGA-41-2572 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-41-2573         TCGA-41-2575         TCGA-41-3392 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-41-3393         TCGA-41-3915         TCGA-41-4097 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-41-5651         TCGA-41-6646         TCGA-74-6573 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-74-6575         TCGA-74-6577         TCGA-74-6578 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-74-6584         TCGA-76-4925         TCGA-76-4926 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-4927         TCGA-76-4928         TCGA-76-4929 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-4931         TCGA-76-4932         TCGA-76-4934 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-4935         TCGA-76-6191         TCGA-76-6192 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-6193         TCGA-76-6280         TCGA-76-6282 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-6283         TCGA-76-6285         TCGA-76-6286 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-6656         TCGA-76-6657         TCGA-76-6660 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-6661         TCGA-76-6662         TCGA-76-6663 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-6664         TCGA-81-5910         TCGA-81-5911 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-87-5896 
"C10ORF76 WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C10ORF76 MUTATED        1      0      0
  C10ORF76 WILD-TYPE    137     61     76
D70V4, multiclass
[1] "Remove cluster labels:" "C10ORF76 MUTATED"      
clus
  C10ORF76 MUTATED C10ORF76 WILD-TYPE 
                 1                274 
        TCGA-02-0003         TCGA-02-0033         TCGA-02-0047 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-02-0055         TCGA-02-2470         TCGA-02-2483 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-02-2485         TCGA-02-2486         TCGA-06-0122 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0124         TCGA-06-0126         TCGA-06-0128 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0129         TCGA-06-0130         TCGA-06-0137 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0139         TCGA-06-0140         TCGA-06-0141 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0142         TCGA-06-0145         TCGA-06-0151 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0152         TCGA-06-0154         TCGA-06-0155 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0157         TCGA-06-0158         TCGA-06-0166 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0168         TCGA-06-0169         TCGA-06-0173 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0174         TCGA-06-0178         TCGA-06-0184 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0185         TCGA-06-0188         TCGA-06-0189 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0192         TCGA-06-0195         TCGA-06-0213 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0214         TCGA-06-0216         TCGA-06-0219 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0237         TCGA-06-0238         TCGA-06-0240 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0241         TCGA-06-0644         TCGA-06-0645 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0646         TCGA-06-0648         TCGA-06-0649 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0650         TCGA-06-0686         TCGA-06-0743 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0744         TCGA-06-0745         TCGA-06-0747 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0749         TCGA-06-0750         TCGA-06-0875 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0876         TCGA-06-0877         TCGA-06-0878 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0879         TCGA-06-0881         TCGA-06-0882 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0939         TCGA-06-1804         TCGA-06-1806 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-2557         TCGA-06-2558         TCGA-06-2559 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-2561         TCGA-06-2562         TCGA-06-2563 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-2564         TCGA-06-2565         TCGA-06-2567 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-2569         TCGA-06-2570         TCGA-06-5408 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5410         TCGA-06-5411         TCGA-06-5412 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5413         TCGA-06-5414         TCGA-06-5415 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5417         TCGA-06-5418         TCGA-06-5856 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5858         TCGA-06-5859         TCGA-06-6388 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-6389         TCGA-06-6390         TCGA-06-6391 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-6693         TCGA-06-6694         TCGA-06-6695 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-6697         TCGA-06-6698         TCGA-06-6699 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-6700         TCGA-06-6701         TCGA-08-0386 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-0616         TCGA-12-0618         TCGA-12-0619 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-0688         TCGA-12-0692         TCGA-12-0821 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-1597         TCGA-12-3649         TCGA-12-3650 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-3652         TCGA-12-3653         TCGA-12-5295 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-5299         TCGA-12-5301         TCGA-14-0740 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-0781         TCGA-14-0786         TCGA-14-0787 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-0789         TCGA-14-0790         TCGA-14-0813 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-0817         TCGA-14-0862         TCGA-14-0871 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-1043         TCGA-14-1395         TCGA-14-1450 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-1456         TCGA-14-1823         TCGA-14-1825 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-1829         TCGA-14-2554         TCGA-14-3476 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-4157         TCGA-15-0742         TCGA-15-1444 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-16-0846         TCGA-16-0861         TCGA-16-1045 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-16-1048         TCGA-19-1390         TCGA-19-1790 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-2619         TCGA-19-2620         TCGA-19-2623 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-2624         TCGA-19-2625         TCGA-19-2629 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-2631         TCGA-19-4068         TCGA-19-5947 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-5950         TCGA-19-5951         TCGA-19-5952 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-5953         TCGA-19-5954         TCGA-19-5955 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-5958         TCGA-19-5959         TCGA-26-1439 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-26-1442         TCGA-26-5132         TCGA-26-5133 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-26-5134         TCGA-26-5135         TCGA-26-5136 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-26-5139         TCGA-26-6173         TCGA-26-6174 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-1830         TCGA-27-1831         TCGA-27-1832 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-1833         TCGA-27-1834         TCGA-27-1835 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-1836         TCGA-27-1837         TCGA-27-1838 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-2518         TCGA-27-2519         TCGA-27-2521 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-2523         TCGA-27-2524         TCGA-27-2526 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-2527         TCGA-27-2528         TCGA-28-1747 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-1753         TCGA-28-2502         TCGA-28-2509 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-2510         TCGA-28-2513         TCGA-28-2514 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-5204         TCGA-28-5207         TCGA-28-5208 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-5209         TCGA-28-5211         TCGA-28-5213 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-5214         TCGA-28-5215         TCGA-28-5216 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-5218         TCGA-28-5219         TCGA-28-5220 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-6450         TCGA-32-1970         TCGA-32-1977 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-1979         TCGA-32-1980         TCGA-32-1982 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-1986         TCGA-32-1991         TCGA-32-2491 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-2494         TCGA-32-2495         TCGA-32-2615 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-2632         TCGA-32-2634         TCGA-32-2638 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-4208         TCGA-32-4209         TCGA-32-4210 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-4211         TCGA-32-4213         TCGA-32-4719 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-5222         TCGA-41-2571         TCGA-41-2572 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-41-2573         TCGA-41-2575         TCGA-41-3392 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-41-3393         TCGA-41-3915         TCGA-41-4097 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-41-5651         TCGA-41-6646         TCGA-74-6573 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-74-6575         TCGA-74-6577         TCGA-74-6578 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-74-6584         TCGA-76-4925         TCGA-76-4926 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-4927         TCGA-76-4928         TCGA-76-4929 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-4931         TCGA-76-4932         TCGA-76-4934 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-4935         TCGA-76-6191         TCGA-76-6192 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-6193         TCGA-76-6280         TCGA-76-6282 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-6283         TCGA-76-6285         TCGA-76-6286 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-6656         TCGA-76-6657         TCGA-76-6660 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-6661         TCGA-76-6662         TCGA-76-6663 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-6664         TCGA-81-5910         TCGA-81-5911 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-87-5896 
"C10ORF76 WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C10ORF76 MUTATED        3      1      0
  C10ORF76 WILD-TYPE    289    431     62
D70V5, multiclass
        clus
vv       C10ORF76 MUTATED C10ORF76 WILD-TYPE
  CLUS_1                3                289
  CLUS_2                1                431
  CLUS_3                0                 62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C10ORF76 MUTATED        3      0      0      1
  C10ORF76 WILD-TYPE    150    223     88    160
D70V6, multiclass
        clus
vv       C10ORF76 MUTATED C10ORF76 WILD-TYPE
  CLUS_1                3                150
  CLUS_2                0                223
  CLUS_3                0                 88
  CLUS_4                1                160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C10ORF76 MUTATED        1      0      1      0
  C10ORF76 WILD-TYPE    184    155    137     95
D70V7, multiclass
[1] "Remove cluster labels:" "C10ORF76 MUTATED"      
clus
  C10ORF76 MUTATED C10ORF76 WILD-TYPE 
                 2                571 
        TCGA-02-0003         TCGA-02-2470         TCGA-02-2485 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0126         TCGA-06-0128         TCGA-06-0129 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0130         TCGA-06-0154         TCGA-06-0155 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0189         TCGA-06-0238         TCGA-06-0644 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0650         TCGA-06-0875         TCGA-06-0876 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0877         TCGA-06-0878         TCGA-06-0879 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0882         TCGA-06-0939         TCGA-06-1804 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-1806         TCGA-06-2557         TCGA-06-2558 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-2559         TCGA-06-2562         TCGA-06-2563 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-2564         TCGA-06-2565         TCGA-06-2567 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-2570         TCGA-06-5408         TCGA-06-5410 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5411         TCGA-06-5412         TCGA-06-5413 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5414         TCGA-06-5415         TCGA-06-5417 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5418         TCGA-06-5856         TCGA-06-5858 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5859         TCGA-06-6388         TCGA-06-6389 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-6390         TCGA-06-6391         TCGA-06-6693 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-6694         TCGA-06-6695         TCGA-06-6697 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-6698         TCGA-06-6699         TCGA-06-6700 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-6701         TCGA-08-0386         TCGA-12-0692 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-1597         TCGA-12-3649         TCGA-12-3650 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-3652         TCGA-12-3653         TCGA-12-5295 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-5301         TCGA-14-0813         TCGA-14-0862 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-0871         TCGA-14-1823         TCGA-16-0846 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-1390         TCGA-19-1790         TCGA-19-2619 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-2620         TCGA-19-2625         TCGA-19-2631 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-4068         TCGA-19-5947         TCGA-19-5950 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-5951         TCGA-19-5952         TCGA-19-5953 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-5954         TCGA-19-5955         TCGA-19-5958 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-5959         TCGA-26-1442         TCGA-26-5132 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-26-5133         TCGA-26-5134         TCGA-26-6173 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-26-6174         TCGA-27-1830         TCGA-27-1831 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-1832         TCGA-27-1833         TCGA-27-1834 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-1836         TCGA-27-2518         TCGA-27-2528 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-1747         TCGA-28-1753         TCGA-28-2501 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-5208         TCGA-28-5214         TCGA-32-1970 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-1982         TCGA-32-1986         TCGA-32-1991 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-4210         TCGA-32-4211         TCGA-32-5222 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-41-2573         TCGA-41-2575         TCGA-41-3392 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-41-3393         TCGA-41-3915         TCGA-41-4097 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-41-5651         TCGA-41-6646         TCGA-74-6573 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-74-6575         TCGA-74-6577         TCGA-74-6578 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-74-6584         TCGA-76-4926         TCGA-76-4927 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-4928         TCGA-76-4929         TCGA-76-4931 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-4932         TCGA-76-6192         TCGA-76-6193 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-6282         TCGA-76-6283         TCGA-76-6285 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-6656         TCGA-76-6657         TCGA-76-6660 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-6661         TCGA-76-6662         TCGA-76-6663 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-6664         TCGA-81-5910         TCGA-CS-4938 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-CS-4942         TCGA-CS-4943         TCGA-CS-4944 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-CS-5390         TCGA-CS-5393         TCGA-CS-5394 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-CS-5396         TCGA-CS-5397         TCGA-CS-6186 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-CS-6188         TCGA-CS-6665         TCGA-CS-6666 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-CS-6668         TCGA-CS-6669         TCGA-CS-6670 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-5270         TCGA-DB-5273         TCGA-DB-5274 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-5275         TCGA-DB-5276         TCGA-DB-5277 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-5278         TCGA-DB-5279         TCGA-DB-5280 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-5281         TCGA-DB-A4X9         TCGA-DB-A4XA 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-A4XB         TCGA-DB-A4XC         TCGA-DB-A4XD 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-A4XE         TCGA-DB-A4XF         TCGA-DB-A4XG 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-A4XH         TCGA-DB-A64L         TCGA-DB-A64O 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-A64P         TCGA-DB-A64Q         TCGA-DB-A64R 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-A64S         TCGA-DB-A64U         TCGA-DB-A64V 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-A64W         TCGA-DB-A64X         TCGA-DB-A75K 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-A75L         TCGA-DB-A75M         TCGA-DB-A75O 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-A75P         TCGA-DH-5140         TCGA-DH-5141 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DH-5142         TCGA-DH-5143         TCGA-DH-5144 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DH-A66B         TCGA-DH-A66D         TCGA-DH-A66F 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DH-A66G         TCGA-DH-A7US         TCGA-DU-5847 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-5849         TCGA-DU-5851         TCGA-DU-5852 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-5853         TCGA-DU-5854         TCGA-DU-5855 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-5870         TCGA-DU-5871         TCGA-DU-5872 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-5874         TCGA-DU-6393         TCGA-DU-6394 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-6395         TCGA-DU-6396         TCGA-DU-6397 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-6399         TCGA-DU-6400         TCGA-DU-6401 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-6402         TCGA-DU-6403         TCGA-DU-6404 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-6405         TCGA-DU-6406         TCGA-DU-6407 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-6408         TCGA-DU-6410         TCGA-DU-6542 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-7006         TCGA-DU-7007         TCGA-DU-7008 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-7009         TCGA-DU-7010         TCGA-DU-7011 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-7012         TCGA-DU-7013         TCGA-DU-7014 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-7015         TCGA-DU-7018         TCGA-DU-7019 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-7290         TCGA-DU-7292         TCGA-DU-7294 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-7298         TCGA-DU-7300         TCGA-DU-7301 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-7302         TCGA-DU-7304         TCGA-DU-7306 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-7309         TCGA-DU-8158         TCGA-DU-8161 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-8162         TCGA-DU-8163         TCGA-DU-8164 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-8165         TCGA-DU-8166         TCGA-DU-8167 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-8168         TCGA-DU-A5TP         TCGA-DU-A5TR 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-A5TS         TCGA-DU-A5TT         TCGA-DU-A5TU 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-A5TW         TCGA-DU-A5TY         TCGA-DU-A6S2 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-A6S3         TCGA-DU-A6S8         TCGA-DU-A76K 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-A76L         TCGA-DU-A76O         TCGA-DU-A76R 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-A7T6         TCGA-DU-A7TA         TCGA-DU-A7TB 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-A7TD         TCGA-DU-A7TG         TCGA-DU-A7TI 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-A7TJ         TCGA-E1-5302         TCGA-E1-5303 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-E1-5304         TCGA-E1-5305         TCGA-E1-5307 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-E1-5311         TCGA-E1-5318         TCGA-E1-5319 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-E1-5322         TCGA-E1-A7YH         TCGA-E1-A7YI 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-E1-A7YJ         TCGA-E1-A7YL         TCGA-E1-A7YM 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-E1-A7YN         TCGA-E1-A7YQ         TCGA-E1-A7YS 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-E1-A7YV         TCGA-E1-A7YW         TCGA-E1-A7YY 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-E1-A7Z2         TCGA-E1-A7Z3         TCGA-E1-A7Z6 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-EZ-7264         TCGA-F6-A8O3         TCGA-F6-A8O4 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-5962         TCGA-FG-5963         TCGA-FG-5964 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-5965         TCGA-FG-6688         TCGA-FG-6689 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-6690         TCGA-FG-6691         TCGA-FG-7634 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-7636         TCGA-FG-7637         TCGA-FG-7638 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-7641         TCGA-FG-7643         TCGA-FG-8181 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-8182         TCGA-FG-8185         TCGA-FG-8186 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-8187         TCGA-FG-8188         TCGA-FG-8189 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-8191         TCGA-FG-A4MT         TCGA-FG-A4MU 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-A4MW         TCGA-FG-A4MX         TCGA-FG-A4MY 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-A60J         TCGA-FG-A60L         TCGA-FG-A6IZ 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-A6J3         TCGA-FG-A70Y         TCGA-FG-A70Z 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-A710         TCGA-FG-A713         TCGA-FG-A87N 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-A87Q         TCGA-HT-7467         TCGA-HT-7468 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7469         TCGA-HT-7470         TCGA-HT-7471 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7472         TCGA-HT-7473         TCGA-HT-7474 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7475         TCGA-HT-7476         TCGA-HT-7477 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7478         TCGA-HT-7479         TCGA-HT-7480 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7481         TCGA-HT-7482         TCGA-HT-7483 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7485         TCGA-HT-7601         TCGA-HT-7602 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7603         TCGA-HT-7604         TCGA-HT-7605 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7606         TCGA-HT-7607         TCGA-HT-7608 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7609         TCGA-HT-7610         TCGA-HT-7611 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7616         TCGA-HT-7620         TCGA-HT-7676 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7677         TCGA-HT-7680         TCGA-HT-7681 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7684         TCGA-HT-7686         TCGA-HT-7687 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7688         TCGA-HT-7689         TCGA-HT-7690 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7691         TCGA-HT-7692         TCGA-HT-7693 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7694         TCGA-HT-7695         TCGA-HT-7854 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7855         TCGA-HT-7856         TCGA-HT-7857 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7858         TCGA-HT-7860         TCGA-HT-7873 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7874         TCGA-HT-7875         TCGA-HT-7877 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7879         TCGA-HT-7880         TCGA-HT-7881 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7882         TCGA-HT-7884         TCGA-HT-7902 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-8010         TCGA-HT-8011         TCGA-HT-8012 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-8013         TCGA-HT-8015         TCGA-HT-8018 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-8019         TCGA-HT-8104         TCGA-HT-8105 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-8106         TCGA-HT-8107         TCGA-HT-8109 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-8110         TCGA-HT-8111         TCGA-HT-8113 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-8114         TCGA-HT-8558         TCGA-HT-8564 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-A4DV         TCGA-HT-A5R5         TCGA-HT-A5R7 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-A5R9         TCGA-HT-A5RB         TCGA-HT-A614 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-A615         TCGA-HT-A616         TCGA-HT-A617 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-A618         TCGA-HT-A619         TCGA-HT-A61A 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-A61B         TCGA-HT-A74H         TCGA-HT-A74J 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-A74L         TCGA-HT-A74O         TCGA-HW-7486 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HW-7487         TCGA-HW-7489         TCGA-HW-7490 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HW-7491         TCGA-HW-7493         TCGA-HW-7495 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HW-8319         TCGA-HW-8320         TCGA-HW-8321 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HW-8322         TCGA-HW-A5KJ         TCGA-HW-A5KK 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HW-A5KM         TCGA-IK-7675         TCGA-IK-8125 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-KT-A74X         TCGA-P5-A5ET         TCGA-P5-A5EU 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-P5-A5EV         TCGA-P5-A5EW         TCGA-P5-A5EX 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-P5-A5EY         TCGA-P5-A5EZ         TCGA-P5-A5F0 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-P5-A5F1         TCGA-P5-A5F2         TCGA-P5-A5F4 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-P5-A5F6         TCGA-P5-A72U         TCGA-P5-A72W 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-P5-A72X         TCGA-P5-A72Z         TCGA-P5-A730 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-P5-A731         TCGA-P5-A733         TCGA-P5-A735 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-P5-A736         TCGA-P5-A737         TCGA-P5-A77W 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-P5-A77X         TCGA-P5-A780         TCGA-P5-A781 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-QH-A65S         TCGA-QH-A65V         TCGA-QH-A65X 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-QH-A65Z         TCGA-QH-A6CS         TCGA-QH-A6CU 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-QH-A6CV         TCGA-QH-A6CW         TCGA-QH-A6CX 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-QH-A6CY         TCGA-QH-A6CZ         TCGA-QH-A6X4 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-QH-A6X5         TCGA-QH-A6X8         TCGA-QH-A6X9 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-QH-A6XA         TCGA-QH-A6XC         TCGA-QH-A86X 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-QH-A870         TCGA-R8-A6MK         TCGA-R8-A6ML 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-R8-A6MO         TCGA-R8-A6YH         TCGA-RY-A83X 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-RY-A83Y         TCGA-RY-A83Z         TCGA-RY-A843 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-RY-A845         TCGA-S9-A6TS         TCGA-S9-A6TU 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-S9-A6TV         TCGA-S9-A6TX         TCGA-S9-A6TY 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-S9-A6U0         TCGA-S9-A6U1         TCGA-S9-A6U5 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-S9-A6U6         TCGA-S9-A6U9         TCGA-S9-A6WD 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-S9-A6WE         TCGA-S9-A6WG         TCGA-S9-A6WH 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-S9-A6WN         TCGA-S9-A6WP         TCGA-S9-A6WQ 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-S9-A7IQ         TCGA-S9-A7IS         TCGA-S9-A7IY 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-S9-A7IZ         TCGA-S9-A7J0         TCGA-S9-A7J1 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-S9-A7J2         TCGA-S9-A7QX         TCGA-S9-A7QZ 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-S9-A7R1         TCGA-S9-A7R4         TCGA-S9-A7R8 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-TM-A7C5         TCGA-TM-A84R         TCGA-TM-A84S 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-TQ-A7RF         TCGA-TQ-A7RG         TCGA-TQ-A7RH 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-TQ-A7RK         TCGA-TQ-A7RN         TCGA-TQ-A7RQ 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-TQ-A7RR         TCGA-TQ-A7RS         TCGA-TQ-A7RV 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-TQ-A7RW         TCGA-TQ-A8XE         TCGA-VM-A8C8 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-VM-A8C9         TCGA-VM-A8CA         TCGA-VM-A8CB 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-VM-A8CD         TCGA-VM-A8CE         TCGA-VM-A8CH 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-VV-A829         TCGA-VV-A86M         TCGA-VW-A7QS 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-W9-A837         TCGA-WY-A85B         TCGA-WY-A85C 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-WY-A85D 
"C10ORF76 WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C10ORF76 MUTATED        1      1      0
  C10ORF76 WILD-TYPE    204    219    148
D70V8, multiclass
[1] "Remove cluster labels:" "C10ORF76 MUTATED"      
clus
  C10ORF76 MUTATED C10ORF76 WILD-TYPE 
                 2                571 
        TCGA-02-0003         TCGA-02-2470         TCGA-02-2485 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0126         TCGA-06-0128         TCGA-06-0129 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0130         TCGA-06-0154         TCGA-06-0155 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0189         TCGA-06-0238         TCGA-06-0644 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0650         TCGA-06-0875         TCGA-06-0876 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0877         TCGA-06-0878         TCGA-06-0879 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-0882         TCGA-06-0939         TCGA-06-1804 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-1806         TCGA-06-2557         TCGA-06-2558 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-2559         TCGA-06-2562         TCGA-06-2563 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-2564         TCGA-06-2565         TCGA-06-2567 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-2570         TCGA-06-5408         TCGA-06-5410 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5411         TCGA-06-5412         TCGA-06-5413 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5414         TCGA-06-5415         TCGA-06-5417 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5418         TCGA-06-5856         TCGA-06-5858 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-5859         TCGA-06-6388         TCGA-06-6389 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-6390         TCGA-06-6391         TCGA-06-6693 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-6694         TCGA-06-6695         TCGA-06-6697 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-6698         TCGA-06-6699         TCGA-06-6700 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-06-6701         TCGA-08-0386         TCGA-12-0692 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-1597         TCGA-12-3649         TCGA-12-3650 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-3652         TCGA-12-3653         TCGA-12-5295 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-12-5301         TCGA-14-0813         TCGA-14-0862 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-14-0871         TCGA-14-1823         TCGA-16-0846 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-1390         TCGA-19-1790         TCGA-19-2619 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-2620         TCGA-19-2625         TCGA-19-2631 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-4068         TCGA-19-5947         TCGA-19-5950 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-5951         TCGA-19-5952         TCGA-19-5953 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-5954         TCGA-19-5955         TCGA-19-5958 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-19-5959         TCGA-26-1442         TCGA-26-5132 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-26-5133         TCGA-26-5134         TCGA-26-6173 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-26-6174         TCGA-27-1830         TCGA-27-1831 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-1832         TCGA-27-1833         TCGA-27-1834 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-27-1836         TCGA-27-2518         TCGA-27-2528 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-1747         TCGA-28-1753         TCGA-28-2501 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-28-5208         TCGA-28-5214         TCGA-32-1970 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-1982         TCGA-32-1986         TCGA-32-1991 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-32-4210         TCGA-32-4211         TCGA-32-5222 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-41-2573         TCGA-41-2575         TCGA-41-3392 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-41-3393         TCGA-41-3915         TCGA-41-4097 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-41-5651         TCGA-41-6646         TCGA-74-6573 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-74-6575         TCGA-74-6577         TCGA-74-6578 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-74-6584         TCGA-76-4926         TCGA-76-4927 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-4928         TCGA-76-4929         TCGA-76-4931 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-4932         TCGA-76-6192         TCGA-76-6193 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-6282         TCGA-76-6283         TCGA-76-6285 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-6656         TCGA-76-6657         TCGA-76-6660 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-6661         TCGA-76-6662         TCGA-76-6663 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-76-6664         TCGA-81-5910         TCGA-CS-4938 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-CS-4942         TCGA-CS-4943         TCGA-CS-4944 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-CS-5390         TCGA-CS-5393         TCGA-CS-5394 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-CS-5396         TCGA-CS-5397         TCGA-CS-6186 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-CS-6188         TCGA-CS-6665         TCGA-CS-6666 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-CS-6668         TCGA-CS-6669         TCGA-CS-6670 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-5270         TCGA-DB-5273         TCGA-DB-5274 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-5275         TCGA-DB-5276         TCGA-DB-5277 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-5278         TCGA-DB-5279         TCGA-DB-5280 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-5281         TCGA-DB-A4X9         TCGA-DB-A4XA 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-A4XB         TCGA-DB-A4XC         TCGA-DB-A4XD 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-A4XE         TCGA-DB-A4XF         TCGA-DB-A4XG 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-A4XH         TCGA-DB-A64L         TCGA-DB-A64O 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-A64P         TCGA-DB-A64Q         TCGA-DB-A64R 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-A64S         TCGA-DB-A64U         TCGA-DB-A64V 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-A64W         TCGA-DB-A64X         TCGA-DB-A75K 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-A75L         TCGA-DB-A75M         TCGA-DB-A75O 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DB-A75P         TCGA-DH-5140         TCGA-DH-5141 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DH-5142         TCGA-DH-5143         TCGA-DH-5144 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DH-A66B         TCGA-DH-A66D         TCGA-DH-A66F 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DH-A66G         TCGA-DH-A7US         TCGA-DU-5847 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-5849         TCGA-DU-5851         TCGA-DU-5852 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-5853         TCGA-DU-5854         TCGA-DU-5855 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-5870         TCGA-DU-5871         TCGA-DU-5872 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-5874         TCGA-DU-6393         TCGA-DU-6394 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-6395         TCGA-DU-6396         TCGA-DU-6397 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-6399         TCGA-DU-6400         TCGA-DU-6401 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-6402         TCGA-DU-6403         TCGA-DU-6404 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-6405         TCGA-DU-6406         TCGA-DU-6407 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-6408         TCGA-DU-6410         TCGA-DU-6542 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-7006         TCGA-DU-7007         TCGA-DU-7008 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-7009         TCGA-DU-7010         TCGA-DU-7011 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-7012         TCGA-DU-7013         TCGA-DU-7014 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-7015         TCGA-DU-7018         TCGA-DU-7019 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-7290         TCGA-DU-7292         TCGA-DU-7294 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-7298         TCGA-DU-7300         TCGA-DU-7301 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-7302         TCGA-DU-7304         TCGA-DU-7306 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-7309         TCGA-DU-8158         TCGA-DU-8161 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-8162         TCGA-DU-8163         TCGA-DU-8164 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-8165         TCGA-DU-8166         TCGA-DU-8167 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-8168         TCGA-DU-A5TP         TCGA-DU-A5TR 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-A5TS         TCGA-DU-A5TT         TCGA-DU-A5TU 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-A5TW         TCGA-DU-A5TY         TCGA-DU-A6S2 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-A6S3         TCGA-DU-A6S8         TCGA-DU-A76K 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-A76L         TCGA-DU-A76O         TCGA-DU-A76R 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-A7T6         TCGA-DU-A7TA         TCGA-DU-A7TB 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-A7TD         TCGA-DU-A7TG         TCGA-DU-A7TI 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-DU-A7TJ         TCGA-E1-5302         TCGA-E1-5303 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-E1-5304         TCGA-E1-5305         TCGA-E1-5307 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-E1-5311         TCGA-E1-5318         TCGA-E1-5319 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-E1-5322         TCGA-E1-A7YH         TCGA-E1-A7YI 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-E1-A7YJ         TCGA-E1-A7YL         TCGA-E1-A7YM 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-E1-A7YN         TCGA-E1-A7YQ         TCGA-E1-A7YS 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-E1-A7YV         TCGA-E1-A7YW         TCGA-E1-A7YY 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-E1-A7Z2         TCGA-E1-A7Z3         TCGA-E1-A7Z6 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-EZ-7264         TCGA-F6-A8O3         TCGA-F6-A8O4 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-5962         TCGA-FG-5963         TCGA-FG-5964 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-5965         TCGA-FG-6688         TCGA-FG-6689 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-6690         TCGA-FG-6691         TCGA-FG-7634 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-7636         TCGA-FG-7637         TCGA-FG-7638 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-7641         TCGA-FG-7643         TCGA-FG-8181 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-8182         TCGA-FG-8185         TCGA-FG-8186 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-8187         TCGA-FG-8188         TCGA-FG-8189 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-8191         TCGA-FG-A4MT         TCGA-FG-A4MU 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-A4MW         TCGA-FG-A4MX         TCGA-FG-A4MY 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-A60J         TCGA-FG-A60L         TCGA-FG-A6IZ 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-A6J3         TCGA-FG-A70Y         TCGA-FG-A70Z 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-A710         TCGA-FG-A713         TCGA-FG-A87N 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-FG-A87Q         TCGA-HT-7467         TCGA-HT-7468 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7469         TCGA-HT-7470         TCGA-HT-7471 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7472         TCGA-HT-7473         TCGA-HT-7474 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7475         TCGA-HT-7476         TCGA-HT-7477 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7478         TCGA-HT-7479         TCGA-HT-7480 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7481         TCGA-HT-7482         TCGA-HT-7483 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7485         TCGA-HT-7601         TCGA-HT-7602 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7603         TCGA-HT-7604         TCGA-HT-7605 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7606         TCGA-HT-7607         TCGA-HT-7608 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7609         TCGA-HT-7610         TCGA-HT-7611 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7616         TCGA-HT-7620         TCGA-HT-7676 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7677         TCGA-HT-7680         TCGA-HT-7681 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7684         TCGA-HT-7686         TCGA-HT-7687 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7688         TCGA-HT-7689         TCGA-HT-7690 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7691         TCGA-HT-7692         TCGA-HT-7693 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7694         TCGA-HT-7695         TCGA-HT-7854 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7855         TCGA-HT-7856         TCGA-HT-7857 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7858         TCGA-HT-7860         TCGA-HT-7873 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7874         TCGA-HT-7875         TCGA-HT-7877 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7879         TCGA-HT-7880         TCGA-HT-7881 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-7882         TCGA-HT-7884         TCGA-HT-7902 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-8010         TCGA-HT-8011         TCGA-HT-8012 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-8013         TCGA-HT-8015         TCGA-HT-8018 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-8019         TCGA-HT-8104         TCGA-HT-8105 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-8106         TCGA-HT-8107         TCGA-HT-8109 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-8110         TCGA-HT-8111         TCGA-HT-8113 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-8114         TCGA-HT-8558         TCGA-HT-8564 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-A4DV         TCGA-HT-A5R5         TCGA-HT-A5R7 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-A5R9         TCGA-HT-A5RB         TCGA-HT-A614 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-A615         TCGA-HT-A616         TCGA-HT-A617 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-A618         TCGA-HT-A619         TCGA-HT-A61A 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-A61B         TCGA-HT-A74H         TCGA-HT-A74J 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HT-A74L         TCGA-HT-A74O         TCGA-HW-7486 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HW-7487         TCGA-HW-7489         TCGA-HW-7490 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HW-7491         TCGA-HW-7493         TCGA-HW-7495 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HW-8319         TCGA-HW-8320         TCGA-HW-8321 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HW-8322         TCGA-HW-A5KJ         TCGA-HW-A5KK 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-HW-A5KM         TCGA-IK-7675         TCGA-IK-8125 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-KT-A74X         TCGA-P5-A5ET         TCGA-P5-A5EU 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-P5-A5EV         TCGA-P5-A5EW         TCGA-P5-A5EX 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-P5-A5EY         TCGA-P5-A5EZ         TCGA-P5-A5F0 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-P5-A5F1         TCGA-P5-A5F2         TCGA-P5-A5F4 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-P5-A5F6         TCGA-P5-A72U         TCGA-P5-A72W 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-P5-A72X         TCGA-P5-A72Z         TCGA-P5-A730 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-P5-A731         TCGA-P5-A733         TCGA-P5-A735 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-P5-A736         TCGA-P5-A737         TCGA-P5-A77W 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-P5-A77X         TCGA-P5-A780         TCGA-P5-A781 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-QH-A65S         TCGA-QH-A65V         TCGA-QH-A65X 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-QH-A65Z         TCGA-QH-A6CS         TCGA-QH-A6CU 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-QH-A6CV         TCGA-QH-A6CW         TCGA-QH-A6CX 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-QH-A6CY         TCGA-QH-A6CZ         TCGA-QH-A6X4 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-QH-A6X5         TCGA-QH-A6X8         TCGA-QH-A6X9 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-QH-A6XA         TCGA-QH-A6XC         TCGA-QH-A86X 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-QH-A870         TCGA-R8-A6MK         TCGA-R8-A6ML 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-R8-A6MO         TCGA-R8-A6YH         TCGA-RY-A83X 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-RY-A83Y         TCGA-RY-A83Z         TCGA-RY-A843 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-RY-A845         TCGA-S9-A6TS         TCGA-S9-A6TU 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-S9-A6TV         TCGA-S9-A6TX         TCGA-S9-A6TY 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-S9-A6U0         TCGA-S9-A6U1         TCGA-S9-A6U5 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-S9-A6U6         TCGA-S9-A6U9         TCGA-S9-A6WD 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-S9-A6WE         TCGA-S9-A6WG         TCGA-S9-A6WH 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-S9-A6WN         TCGA-S9-A6WP         TCGA-S9-A6WQ 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-S9-A7IQ         TCGA-S9-A7IS         TCGA-S9-A7IY 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-S9-A7IZ         TCGA-S9-A7J0         TCGA-S9-A7J1 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-S9-A7J2         TCGA-S9-A7QX         TCGA-S9-A7QZ 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-S9-A7R1         TCGA-S9-A7R4         TCGA-S9-A7R8 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-TM-A7C5         TCGA-TM-A84R         TCGA-TM-A84S 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-TQ-A7RF         TCGA-TQ-A7RG         TCGA-TQ-A7RH 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-TQ-A7RK         TCGA-TQ-A7RN         TCGA-TQ-A7RQ 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-TQ-A7RR         TCGA-TQ-A7RS         TCGA-TQ-A7RV 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-TQ-A7RW         TCGA-TQ-A8XE         TCGA-VM-A8C8 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-VM-A8C9         TCGA-VM-A8CA         TCGA-VM-A8CB 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-VM-A8CD         TCGA-VM-A8CE         TCGA-VM-A8CH 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-VV-A829         TCGA-VV-A86M         TCGA-VW-A7QS 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-W9-A837         TCGA-WY-A85B         TCGA-WY-A85C 
"C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" "C10ORF76 WILD-TYPE" 
        TCGA-WY-A85D 
"C10ORF76 WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C10ORF76 MUTATED        3      1      0
  C10ORF76 WILD-TYPE    235    190    228
D70V9, multiclass
        clus
vv       C10ORF76 MUTATED C10ORF76 WILD-TYPE
  CLUS_1                3                235
  CLUS_2                1                190
  CLUS_3                0                228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C10ORF76 MUTATED        2      1      1
  C10ORF76 WILD-TYPE    194    190    269
D70V10, multiclass
        clus
vv       C10ORF76 MUTATED C10ORF76 WILD-TYPE
  CLUS_1                2                194
  CLUS_2                1                190
  CLUS_3                1                269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C10ORF76 MUTATED        0      2      0      1
  C10ORF76 WILD-TYPE    140    105     83    181
D70V11, multiclass
        clus
vv       C10ORF76 MUTATED C10ORF76 WILD-TYPE
  CLUS_1                0                140
  CLUS_2                2                105
  CLUS_3                0                 83
  CLUS_4                1                181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C10ORF76 MUTATED        0      1      2
  C10ORF76 WILD-TYPE    223    185    101
D70V12, multiclass
        clus
vv       C10ORF76 MUTATED C10ORF76 WILD-TYPE
  CLUS_1                0                223
  CLUS_2                1                185
  CLUS_3                2                101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C10ORF76 MUTATED        0      1      0      2
  C10ORF76 WILD-TYPE    127    118    106    154
D70V13, multiclass
        clus
vv       C10ORF76 MUTATED C10ORF76 WILD-TYPE
  CLUS_1                0                127
  CLUS_2                1                118
  CLUS_3                0                106
  CLUS_4                2                154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  C10ORF76 MUTATED        0      0      1      0      1      1
  C10ORF76 WILD-TYPE     99     77    119     57     62     91
D70V14, multiclass
        clus
vv       C10ORF76 MUTATED C10ORF76 WILD-TYPE
  CLUS_1                0                 99
  CLUS_2                0                 77
  CLUS_3                1                119
  CLUS_4                0                 57
  CLUS_5                1                 62
  CLUS_6                1                 91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(71) Variable = TRPV6 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRPV6 MUTATED        1      2      1      2
  TRPV6 WILD-TYPE     77     39     63     55
D71V1, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             1              77
  CLUS_2             2              39
  CLUS_3             1              63
  CLUS_4             2              55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRPV6 MUTATED        0      3      1      2
  TRPV6 WILD-TYPE     63     47     47     77
D71V2, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             0              63
  CLUS_2             3              47
  CLUS_3             1              47
  CLUS_4             2              77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRPV6 MUTATED        0      4      2      1
  TRPV6 WILD-TYPE     70     94     42     62
D71V3, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             0              70
  CLUS_2             4              94
  CLUS_3             2              42
  CLUS_4             1              62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRPV6 MUTATED        4      1      2
  TRPV6 WILD-TYPE    134     60     74
D71V4, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             4             134
  CLUS_2             1              60
  CLUS_3             2              74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRPV6 MUTATED        7      4      1
  TRPV6 WILD-TYPE    285    428     61
D71V5, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             7             285
  CLUS_2             4             428
  CLUS_3             1              61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRPV6 MUTATED        3      1      1      2
  TRPV6 WILD-TYPE    150    222     87    159
D71V6, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             3             150
  CLUS_2             1             222
  CLUS_3             1              87
  CLUS_4             2             159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRPV6 MUTATED        3      3      1      1
  TRPV6 WILD-TYPE    182    152    137     94
D71V7, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             3             182
  CLUS_2             3             152
  CLUS_3             1             137
  CLUS_4             1              94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRPV6 MUTATED        1      4      3
  TRPV6 WILD-TYPE    204    216    145
D71V8, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             1             204
  CLUS_2             4             216
  CLUS_3             3             145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRPV6 MUTATED        7      3      1
  TRPV6 WILD-TYPE    231    188    227
D71V9, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             7             231
  CLUS_2             3             188
  CLUS_3             1             227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRPV6 MUTATED        5      3      3
  TRPV6 WILD-TYPE    191    188    267
D71V10, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             5             191
  CLUS_2             3             188
  CLUS_3             3             267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRPV6 MUTATED        1      2      0      3
  TRPV6 WILD-TYPE    139    105     83    179
D71V11, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             1             139
  CLUS_2             2             105
  CLUS_3             0              83
  CLUS_4             3             179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRPV6 MUTATED        3      1      2
  TRPV6 WILD-TYPE    220    185    101
D71V12, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             3             220
  CLUS_2             1             185
  CLUS_3             2             101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRPV6 MUTATED        1      2      0      3
  TRPV6 WILD-TYPE    126    117    106    153
D71V13, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             1             126
  CLUS_2             2             117
  CLUS_3             0             106
  CLUS_4             3             153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  TRPV6 MUTATED        1      1      1      0      1      2
  TRPV6 WILD-TYPE     98     76    119     57     62     90
D71V14, multiclass
        clus
vv       TRPV6 MUTATED TRPV6 WILD-TYPE
  CLUS_1             1              98
  CLUS_2             1              76
  CLUS_3             1             119
  CLUS_4             0              57
  CLUS_5             1              62
  CLUS_6             2              90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(72) Variable = PDHA1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDHA1 MUTATED        0      0      1      0
  PDHA1 WILD-TYPE     78     41     63     57
D72V1, multiclass
[1] "Remove cluster labels:" "PDHA1 MUTATED"         
clus
  PDHA1 MUTATED PDHA1 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDHA1 MUTATED        0      0      0      1
  PDHA1 WILD-TYPE     63     50     48     78
D72V2, multiclass
[1] "Remove cluster labels:" "PDHA1 MUTATED"         
clus
  PDHA1 MUTATED PDHA1 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDHA1 MUTATED        0      0      0      1
  PDHA1 WILD-TYPE     70     98     44     62
D72V3, multiclass
[1] "Remove cluster labels:" "PDHA1 MUTATED"         
clus
  PDHA1 MUTATED PDHA1 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2629 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDHA1 MUTATED        0      1      0
  PDHA1 WILD-TYPE    138     60     76
D72V4, multiclass
[1] "Remove cluster labels:" "PDHA1 MUTATED"         
clus
  PDHA1 MUTATED PDHA1 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2629 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"PDHA1 WILD-TYPE" "PDHA1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDHA1 MUTATED        1      4      1
  PDHA1 WILD-TYPE    291    428     61
D72V5, multiclass
        clus
vv       PDHA1 MUTATED PDHA1 WILD-TYPE
  CLUS_1             1             291
  CLUS_2             4             428
  CLUS_3             1              61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDHA1 MUTATED        1      1      0      3
  PDHA1 WILD-TYPE    152    222     88    158
D72V6, multiclass
        clus
vv       PDHA1 MUTATED PDHA1 WILD-TYPE
  CLUS_1             1             152
  CLUS_2             1             222
  CLUS_3             0              88
  CLUS_4             3             158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDHA1 MUTATED        3      1      1      1
  PDHA1 WILD-TYPE    182    154    137     94
D72V7, multiclass
        clus
vv       PDHA1 MUTATED PDHA1 WILD-TYPE
  CLUS_1             3             182
  CLUS_2             1             154
  CLUS_3             1             137
  CLUS_4             1              94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDHA1 MUTATED        4      1      1
  PDHA1 WILD-TYPE    201    219    147
D72V8, multiclass
        clus
vv       PDHA1 MUTATED PDHA1 WILD-TYPE
  CLUS_1             4             201
  CLUS_2             1             219
  CLUS_3             1             147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDHA1 MUTATED        2      1      3
  PDHA1 WILD-TYPE    236    190    225
D72V9, multiclass
        clus
vv       PDHA1 MUTATED PDHA1 WILD-TYPE
  CLUS_1             2             236
  CLUS_2             1             190
  CLUS_3             3             225
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDHA1 MUTATED        2      1      3
  PDHA1 WILD-TYPE    194    190    267
D72V10, multiclass
        clus
vv       PDHA1 MUTATED PDHA1 WILD-TYPE
  CLUS_1             2             194
  CLUS_2             1             190
  CLUS_3             3             267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDHA1 MUTATED        2      1      0      2
  PDHA1 WILD-TYPE    138    106     83    180
D72V11, multiclass
        clus
vv       PDHA1 MUTATED PDHA1 WILD-TYPE
  CLUS_1             2             138
  CLUS_2             1             106
  CLUS_3             0              83
  CLUS_4             2             180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDHA1 MUTATED        3      1      1
  PDHA1 WILD-TYPE    220    185    102
D72V12, multiclass
        clus
vv       PDHA1 MUTATED PDHA1 WILD-TYPE
  CLUS_1             3             220
  CLUS_2             1             185
  CLUS_3             1             102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDHA1 MUTATED        1      2      1      1
  PDHA1 WILD-TYPE    126    117    105    155
D72V13, multiclass
        clus
vv       PDHA1 MUTATED PDHA1 WILD-TYPE
  CLUS_1             1             126
  CLUS_2             2             117
  CLUS_3             1             105
  CLUS_4             1             155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  PDHA1 MUTATED        0      3      1      0      1      0
  PDHA1 WILD-TYPE     99     74    119     57     62     92
D72V14, multiclass
        clus
vv       PDHA1 MUTATED PDHA1 WILD-TYPE
  CLUS_1             0              99
  CLUS_2             3              74
  CLUS_3             1             119
  CLUS_4             0              57
  CLUS_5             1              62
  CLUS_6             0              92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(73) Variable = ZDHHC4 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZDHHC4 MUTATED        0      1      0      0
  ZDHHC4 WILD-TYPE     78     40     64     57
D73V1, multiclass
[1] "Remove cluster labels:" "ZDHHC4 MUTATED"        
clus
  ZDHHC4 MUTATED ZDHHC4 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2629       TCGA-19-2631       TCGA-19-4068 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-26-5139       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-2501       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5213       TCGA-28-5214 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-76-4925 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZDHHC4 MUTATED        0      1      0      0
  ZDHHC4 WILD-TYPE     63     49     48     79
D73V2, multiclass
[1] "Remove cluster labels:" "ZDHHC4 MUTATED"        
clus
  ZDHHC4 MUTATED ZDHHC4 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2629       TCGA-19-2631       TCGA-19-4068 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-26-5139       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-2501       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5213       TCGA-28-5214 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-76-4925 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZDHHC4 MUTATED        0      3      0      0
  ZDHHC4 WILD-TYPE     70     95     44     63
D73V3, multiclass
        clus
vv       ZDHHC4 MUTATED ZDHHC4 WILD-TYPE
  CLUS_1              0               70
  CLUS_2              3               95
  CLUS_3              0               44
  CLUS_4              0               63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZDHHC4 MUTATED        2      0      1
  ZDHHC4 WILD-TYPE    136     61     75
D73V4, multiclass
        clus
vv       ZDHHC4 MUTATED ZDHHC4 WILD-TYPE
  CLUS_1              2              136
  CLUS_2              0               61
  CLUS_3              1               75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZDHHC4 MUTATED        4      0      0
  ZDHHC4 WILD-TYPE    288    432     62
D73V5, multiclass
        clus
vv       ZDHHC4 MUTATED ZDHHC4 WILD-TYPE
  CLUS_1              4              288
  CLUS_2              0              432
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZDHHC4 MUTATED        4      0      0      0
  ZDHHC4 WILD-TYPE    149    223     88    161
D73V6, multiclass
        clus
vv       ZDHHC4 MUTATED ZDHHC4 WILD-TYPE
  CLUS_1              4              149
  CLUS_2              0              223
  CLUS_3              0               88
  CLUS_4              0              161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZDHHC4 MUTATED        1      1      1      0
  ZDHHC4 WILD-TYPE    184    154    137     95
D73V7, multiclass
        clus
vv       ZDHHC4 MUTATED ZDHHC4 WILD-TYPE
  CLUS_1              1              184
  CLUS_2              1              154
  CLUS_3              1              137
  CLUS_4              0               95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZDHHC4 MUTATED        2      1      0
  ZDHHC4 WILD-TYPE    203    219    148
D73V8, multiclass
        clus
vv       ZDHHC4 MUTATED ZDHHC4 WILD-TYPE
  CLUS_1              2              203
  CLUS_2              1              219
  CLUS_3              0              148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZDHHC4 MUTATED        2      0      0
  ZDHHC4 WILD-TYPE    236    191    228
D73V9, multiclass
[1] "Remove cluster labels:" "ZDHHC4 MUTATED"        
clus
  ZDHHC4 MUTATED ZDHHC4 WILD-TYPE 
               2              655 
      TCGA-02-0047       TCGA-02-0055       TCGA-02-2483       TCGA-02-2485 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-02-2486       TCGA-06-0129       TCGA-06-0130       TCGA-06-0132 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0157       TCGA-06-0158       TCGA-06-0168 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0174       TCGA-06-0178       TCGA-06-0184       TCGA-06-0219 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0238       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0649       TCGA-06-0686       TCGA-06-0743       TCGA-06-0744 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0745       TCGA-06-0747       TCGA-06-0749       TCGA-06-0750 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0878       TCGA-06-0882       TCGA-06-1804       TCGA-06-2557 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-08-0386       TCGA-12-0616 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0821       TCGA-12-1597 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-5299       TCGA-14-0781       TCGA-14-0787       TCGA-14-0789 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0817       TCGA-14-1823       TCGA-14-1825 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-15-0742       TCGA-15-1444 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-1045       TCGA-19-1390       TCGA-19-2619 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1834 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1837       TCGA-27-2519       TCGA-27-2521 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2528 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2499       TCGA-28-2509 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-2510       TCGA-28-2513       TCGA-28-2514       TCGA-28-5204 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5213 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5220 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1980       TCGA-32-1982       TCGA-32-2615 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4213 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-3915 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-41-4097       TCGA-76-4925       TCGA-76-4926       TCGA-76-4927 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-76-4928       TCGA-76-4929       TCGA-76-4931       TCGA-76-4932 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75M 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A75O       TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-5142       TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A66B       TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A7UR       TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A7UV       TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5852       TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5870       TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7011       TCGA-DU-7012 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7013       TCGA-DU-7014       TCGA-DU-7015       TCGA-DU-7018 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7TI       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A74J       TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-7491       TCGA-HW-7493       TCGA-HW-7495       TCGA-HW-8319 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW       TCGA-P5-A5EX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6       TCGA-P5-A72U 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A736 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X       TCGA-P5-A780 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S       TCGA-QH-A65V 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS       TCGA-QH-A6CU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6CV       TCGA-QH-A6CW       TCGA-QH-A6CX       TCGA-QH-A6CY 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6U9 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZDHHC4 MUTATED        1      1      0
  ZDHHC4 WILD-TYPE    195    190    270
D73V10, multiclass
[1] "Remove cluster labels:" "ZDHHC4 MUTATED"        
clus
  ZDHHC4 MUTATED ZDHHC4 WILD-TYPE 
               2              655 
      TCGA-02-0047       TCGA-02-0055       TCGA-02-2483       TCGA-02-2485 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-02-2486       TCGA-06-0129       TCGA-06-0130       TCGA-06-0132 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0157       TCGA-06-0158       TCGA-06-0168 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0174       TCGA-06-0178       TCGA-06-0184       TCGA-06-0219 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0238       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0649       TCGA-06-0686       TCGA-06-0743       TCGA-06-0744 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0745       TCGA-06-0747       TCGA-06-0749       TCGA-06-0750 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-0878       TCGA-06-0882       TCGA-06-1804       TCGA-06-2557 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-08-0386       TCGA-12-0616 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0821       TCGA-12-1597 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-12-5299       TCGA-14-0781       TCGA-14-0787       TCGA-14-0789 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0817       TCGA-14-1823       TCGA-14-1825 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-15-0742       TCGA-15-1444 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-1045       TCGA-19-1390       TCGA-19-2619 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1834 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1837       TCGA-27-2519       TCGA-27-2521 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2528 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2499       TCGA-28-2509 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-2510       TCGA-28-2513       TCGA-28-2514       TCGA-28-5204 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5213 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5220 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1980       TCGA-32-1982       TCGA-32-2615 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4213 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-3915 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-41-4097       TCGA-76-4925       TCGA-76-4926       TCGA-76-4927 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-76-4928       TCGA-76-4929       TCGA-76-4931       TCGA-76-4932 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75M 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A75O       TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-5142       TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A66B       TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A7UR       TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A7UV       TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5852       TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5870       TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7011       TCGA-DU-7012 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7013       TCGA-DU-7014       TCGA-DU-7015       TCGA-DU-7018 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7TI       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A74J       TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-7491       TCGA-HW-7493       TCGA-HW-7495       TCGA-HW-8319 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW       TCGA-P5-A5EX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6       TCGA-P5-A72U 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A736 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X       TCGA-P5-A780 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S       TCGA-QH-A65V 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS       TCGA-QH-A6CU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6CV       TCGA-QH-A6CW       TCGA-QH-A6CX       TCGA-QH-A6CY 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6U9 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZDHHC4 MUTATED        0      1      0      0
  ZDHHC4 WILD-TYPE    140    106     83    182
D73V11, multiclass
[1] "Remove cluster labels:" "ZDHHC4 MUTATED"        
clus
  ZDHHC4 MUTATED ZDHHC4 WILD-TYPE 
               1              511 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6393 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7014 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TI       TCGA-DU-A7TJ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K       TCGA-HT-A74L 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7493       TCGA-HW-7495 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX       TCGA-QH-A6CY 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6U9 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZDHHC4 MUTATED        0      0      1
  ZDHHC4 WILD-TYPE    223    186    102
D73V12, multiclass
[1] "Remove cluster labels:" "ZDHHC4 MUTATED"        
clus
  ZDHHC4 MUTATED ZDHHC4 WILD-TYPE 
               1              511 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6393 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7014 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TI       TCGA-DU-A7TJ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K       TCGA-HT-A74L 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7493       TCGA-HW-7495 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX       TCGA-QH-A6CY 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6U9 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZDHHC4 MUTATED        0      0      0      1
  ZDHHC4 WILD-TYPE    127    119    106    155
D73V13, multiclass
[1] "Remove cluster labels:" "ZDHHC4 MUTATED"        
clus
  ZDHHC4 MUTATED ZDHHC4 WILD-TYPE 
               1              507 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6393       TCGA-DU-6394 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7014       TCGA-DU-7015 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TI       TCGA-DU-A7TJ       TCGA-E1-5302 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A74H       TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-7491       TCGA-HW-7493       TCGA-HW-7495       TCGA-HW-8319 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW       TCGA-P5-A5EX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A72U       TCGA-P5-A72W 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A737       TCGA-P5-A77W 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  ZDHHC4 MUTATED        0      0      0      0      0      1
  ZDHHC4 WILD-TYPE     99     77    120     57     63     91
D73V14, multiclass
[1] "Remove cluster labels:" "ZDHHC4 MUTATED"        
clus
  ZDHHC4 MUTATED ZDHHC4 WILD-TYPE 
               1              507 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6393       TCGA-DU-6394 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7014       TCGA-DU-7015 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TI       TCGA-DU-A7TJ       TCGA-E1-5302 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HT-A74H       TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-7491       TCGA-HW-7493       TCGA-HW-7495       TCGA-HW-8319 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW       TCGA-P5-A5EX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A72U       TCGA-P5-A72W 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A737       TCGA-P5-A77W 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" "ZDHHC4 WILD-TYPE" 

Clustering(74) Variable = FAM123C MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM123C MUTATED        3      3      0      0
  FAM123C WILD-TYPE     75     38     64     57
D74V1, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               3                75
  CLUS_2               3                38
  CLUS_3               0                64
  CLUS_4               0                57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM123C MUTATED        3      1      0      2
  FAM123C WILD-TYPE     60     49     48     77
D74V2, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               3                60
  CLUS_2               1                49
  CLUS_3               0                48
  CLUS_4               2                77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM123C MUTATED        2      3      0      1
  FAM123C WILD-TYPE     68     95     44     62
D74V3, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               2                68
  CLUS_2               3                95
  CLUS_3               0                44
  CLUS_4               1                62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM123C MUTATED        1      3      2
  FAM123C WILD-TYPE    137     58     74
D74V4, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               1               137
  CLUS_2               3                58
  CLUS_3               2                74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM123C MUTATED        7      2      2
  FAM123C WILD-TYPE    285    430     60
D74V5, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               7               285
  CLUS_2               2               430
  CLUS_3               2                60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM123C MUTATED        2      2      2      0
  FAM123C WILD-TYPE    151    221     86    161
D74V6, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               2               151
  CLUS_2               2               221
  CLUS_3               2                86
  CLUS_4               0               161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM123C MUTATED        3      0      3      1
  FAM123C WILD-TYPE    182    155    135     94
D74V7, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               3               182
  CLUS_2               0               155
  CLUS_3               3               135
  CLUS_4               1                94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM123C MUTATED        4      3      0
  FAM123C WILD-TYPE    201    217    148
D74V8, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               4               201
  CLUS_2               3               217
  CLUS_3               0               148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM123C MUTATED        5      0      3
  FAM123C WILD-TYPE    233    191    225
D74V9, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               5               233
  CLUS_2               0               191
  CLUS_3               3               225
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM123C MUTATED        5      2      1
  FAM123C WILD-TYPE    191    189    269
D74V10, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               5               191
  CLUS_2               2               189
  CLUS_3               1               269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM123C MUTATED        3      0      1      0
  FAM123C WILD-TYPE    137    107     82    182
D74V11, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               3               137
  CLUS_2               0               107
  CLUS_3               1                82
  CLUS_4               0               182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM123C MUTATED        3      0      1
  FAM123C WILD-TYPE    220    186    102
D74V12, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               3               220
  CLUS_2               0               186
  CLUS_3               1               102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM123C MUTATED        1      2      1      0
  FAM123C WILD-TYPE    126    117    105    156
D74V13, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               1               126
  CLUS_2               2               117
  CLUS_3               1               105
  CLUS_4               0               156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  FAM123C MUTATED        2      1      0      0      1      0
  FAM123C WILD-TYPE     97     76    120     57     62     92
D74V14, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               2                97
  CLUS_2               1                76
  CLUS_3               0               120
  CLUS_4               0                57
  CLUS_5               1                62
  CLUS_6               0                92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(75) Variable = CPEB4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CPEB4 MUTATED        0      0      1      0
  CPEB4 WILD-TYPE     78     41     63     57
D75V1, multiclass
[1] "Remove cluster labels:" "CPEB4 MUTATED"         
clus
  CPEB4 MUTATED CPEB4 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CPEB4 MUTATED        0      0      1      0
  CPEB4 WILD-TYPE     63     50     47     79
D75V2, multiclass
[1] "Remove cluster labels:" "CPEB4 MUTATED"         
clus
  CPEB4 MUTATED CPEB4 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CPEB4 MUTATED        0      0      1      0
  CPEB4 WILD-TYPE     70     98     43     63
D75V3, multiclass
[1] "Remove cluster labels:" "CPEB4 MUTATED"         
clus
  CPEB4 MUTATED CPEB4 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-1806 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-12-0616      TCGA-12-0618      TCGA-12-0619      TCGA-12-0688 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-12-0692      TCGA-12-0821      TCGA-12-1597      TCGA-12-3649 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-12-5299      TCGA-12-5301      TCGA-14-0740      TCGA-14-0781 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CPEB4 MUTATED        1      0      0
  CPEB4 WILD-TYPE    137     61     76
D75V4, multiclass
[1] "Remove cluster labels:" "CPEB4 MUTATED"         
clus
  CPEB4 MUTATED CPEB4 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-1806 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-12-0616      TCGA-12-0618      TCGA-12-0619      TCGA-12-0688 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-12-0692      TCGA-12-0821      TCGA-12-1597      TCGA-12-3649 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-12-5299      TCGA-12-5301      TCGA-14-0740      TCGA-14-0781 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"CPEB4 WILD-TYPE" "CPEB4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CPEB4 MUTATED        2      5      0
  CPEB4 WILD-TYPE    290    427     62
D75V5, multiclass
        clus
vv       CPEB4 MUTATED CPEB4 WILD-TYPE
  CLUS_1             2             290
  CLUS_2             5             427
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CPEB4 MUTATED        1      1      1      3
  CPEB4 WILD-TYPE    152    222     87    158
D75V6, multiclass
        clus
vv       CPEB4 MUTATED CPEB4 WILD-TYPE
  CLUS_1             1             152
  CLUS_2             1             222
  CLUS_3             1              87
  CLUS_4             3             158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CPEB4 MUTATED        3      1      0      2
  CPEB4 WILD-TYPE    182    154    138     93
D75V7, multiclass
        clus
vv       CPEB4 MUTATED CPEB4 WILD-TYPE
  CLUS_1             3             182
  CLUS_2             1             154
  CLUS_3             0             138
  CLUS_4             2              93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CPEB4 MUTATED        3      2      1
  CPEB4 WILD-TYPE    202    218    147
D75V8, multiclass
        clus
vv       CPEB4 MUTATED CPEB4 WILD-TYPE
  CLUS_1             3             202
  CLUS_2             2             218
  CLUS_3             1             147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CPEB4 MUTATED        2      3      2
  CPEB4 WILD-TYPE    236    188    226
D75V9, multiclass
        clus
vv       CPEB4 MUTATED CPEB4 WILD-TYPE
  CLUS_1             2             236
  CLUS_2             3             188
  CLUS_3             2             226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CPEB4 MUTATED        1      2      4
  CPEB4 WILD-TYPE    195    189    266
D75V10, multiclass
        clus
vv       CPEB4 MUTATED CPEB4 WILD-TYPE
  CLUS_1             1             195
  CLUS_2             2             189
  CLUS_3             4             266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CPEB4 MUTATED        1      1      2      2
  CPEB4 WILD-TYPE    139    106     81    180
D75V11, multiclass
        clus
vv       CPEB4 MUTATED CPEB4 WILD-TYPE
  CLUS_1             1             139
  CLUS_2             1             106
  CLUS_3             2              81
  CLUS_4             2             180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CPEB4 MUTATED        3      2      1
  CPEB4 WILD-TYPE    220    184    102
D75V12, multiclass
        clus
vv       CPEB4 MUTATED CPEB4 WILD-TYPE
  CLUS_1             3             220
  CLUS_2             2             184
  CLUS_3             1             102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CPEB4 MUTATED        0      1      2      3
  CPEB4 WILD-TYPE    127    118    104    153
D75V13, multiclass
        clus
vv       CPEB4 MUTATED CPEB4 WILD-TYPE
  CLUS_1             0             127
  CLUS_2             1             118
  CLUS_3             2             104
  CLUS_4             3             153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  CPEB4 MUTATED        0      1      1      2      0      2
  CPEB4 WILD-TYPE     99     76    119     55     63     90
D75V14, multiclass
        clus
vv       CPEB4 MUTATED CPEB4 WILD-TYPE
  CLUS_1             0              99
  CLUS_2             1              76
  CLUS_3             1             119
  CLUS_4             2              55
  CLUS_5             0              63
  CLUS_6             2              90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(76) Variable = EEF1A1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EEF1A1 MUTATED        1      0      3      0
  EEF1A1 WILD-TYPE     77     41     61     57
D76V1, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              1               77
  CLUS_2              0               41
  CLUS_3              3               61
  CLUS_4              0               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EEF1A1 MUTATED        0      0      2      2
  EEF1A1 WILD-TYPE     63     50     46     77
D76V2, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              0               63
  CLUS_2              0               50
  CLUS_3              2               46
  CLUS_4              2               77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EEF1A1 MUTATED        0      2      1      1
  EEF1A1 WILD-TYPE     70     96     43     62
D76V3, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              0               70
  CLUS_2              2               96
  CLUS_3              1               43
  CLUS_4              1               62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EEF1A1 MUTATED        1      1      2
  EEF1A1 WILD-TYPE    137     60     74
D76V4, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              1              137
  CLUS_2              1               60
  CLUS_3              2               74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EEF1A1 MUTATED        7      1      0
  EEF1A1 WILD-TYPE    285    431     62
D76V5, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              7              285
  CLUS_2              1              431
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EEF1A1 MUTATED        3      1      0      1
  EEF1A1 WILD-TYPE    150    222     88    160
D76V6, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              3              150
  CLUS_2              1              222
  CLUS_3              0               88
  CLUS_4              1              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EEF1A1 MUTATED        4      0      0      0
  EEF1A1 WILD-TYPE    181    155    138     95
D76V7, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              4              181
  CLUS_2              0              155
  CLUS_3              0              138
  CLUS_4              0               95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EEF1A1 MUTATED        2      2      0
  EEF1A1 WILD-TYPE    203    218    148
D76V8, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              2              203
  CLUS_2              2              218
  CLUS_3              0              148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EEF1A1 MUTATED        4      0      2
  EEF1A1 WILD-TYPE    234    191    226
D76V9, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              4              234
  CLUS_2              0              191
  CLUS_3              2              226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EEF1A1 MUTATED        3      2      1
  EEF1A1 WILD-TYPE    193    189    269
D76V10, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              3              193
  CLUS_2              2              189
  CLUS_3              1              269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EEF1A1 MUTATED        0      3      1      0
  EEF1A1 WILD-TYPE    140    104     82    182
D76V11, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              0              140
  CLUS_2              3              104
  CLUS_3              1               82
  CLUS_4              0              182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EEF1A1 MUTATED        2      0      2
  EEF1A1 WILD-TYPE    221    186    101
D76V12, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              2              221
  CLUS_2              0              186
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EEF1A1 MUTATED        1      2      0      1
  EEF1A1 WILD-TYPE    126    117    106    155
D76V13, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              1              126
  CLUS_2              2              117
  CLUS_3              0              106
  CLUS_4              1              155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  EEF1A1 MUTATED        1      0      0      1      1      1
  EEF1A1 WILD-TYPE     98     77    120     56     62     91
D76V14, multiclass
        clus
vv       EEF1A1 MUTATED EEF1A1 WILD-TYPE
  CLUS_1              1               98
  CLUS_2              0               77
  CLUS_3              0              120
  CLUS_4              1               56
  CLUS_5              1               62
  CLUS_6              1               91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(77) Variable = PROKR2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PROKR2 MUTATED        1      0      3      1
  PROKR2 WILD-TYPE     77     41     61     56
D77V1, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              1               77
  CLUS_2              0               41
  CLUS_3              3               61
  CLUS_4              1               56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PROKR2 MUTATED        1      1      2      1
  PROKR2 WILD-TYPE     62     49     46     78
D77V2, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              1               62
  CLUS_2              1               49
  CLUS_3              2               46
  CLUS_4              1               78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PROKR2 MUTATED        0      2      1      2
  PROKR2 WILD-TYPE     70     96     43     61
D77V3, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              0               70
  CLUS_2              2               96
  CLUS_3              1               43
  CLUS_4              2               61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PROKR2 MUTATED        1      1      3
  PROKR2 WILD-TYPE    137     60     73
D77V4, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              1              137
  CLUS_2              1               60
  CLUS_3              3               73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PROKR2 MUTATED        7      1      1
  PROKR2 WILD-TYPE    285    431     61
D77V5, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              7              285
  CLUS_2              1              431
  CLUS_3              1               61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PROKR2 MUTATED        3      2      0      0
  PROKR2 WILD-TYPE    150    221     88    161
D77V6, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              3              150
  CLUS_2              2              221
  CLUS_3              0               88
  CLUS_4              0              161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PROKR2 MUTATED        0      1      2      0
  PROKR2 WILD-TYPE    185    154    136     95
D77V7, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              0              185
  CLUS_2              1              154
  CLUS_3              2              136
  CLUS_4              0               95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PROKR2 MUTATED        0      2      1
  PROKR2 WILD-TYPE    205    218    147
D77V8, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              0              205
  CLUS_2              2              218
  CLUS_3              1              147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PROKR2 MUTATED        6      1      1
  PROKR2 WILD-TYPE    232    190    227
D77V9, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              6              232
  CLUS_2              1              190
  CLUS_3              1              227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PROKR2 MUTATED        6      1      1
  PROKR2 WILD-TYPE    190    190    269
D77V10, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              6              190
  CLUS_2              1              190
  CLUS_3              1              269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PROKR2 MUTATED        0      0      0      3
  PROKR2 WILD-TYPE    140    107     83    179
D77V11, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              0              140
  CLUS_2              0              107
  CLUS_3              0               83
  CLUS_4              3              179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PROKR2 MUTATED        1      1      1
  PROKR2 WILD-TYPE    222    185    102
D77V12, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              1              222
  CLUS_2              1              185
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PROKR2 MUTATED        1      1      0      1
  PROKR2 WILD-TYPE    126    118    106    155
D77V13, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              1              126
  CLUS_2              1              118
  CLUS_3              0              106
  CLUS_4              1              155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  PROKR2 MUTATED        0      1      0      0      1      1
  PROKR2 WILD-TYPE     99     76    120     57     62     91
D77V14, multiclass
        clus
vv       PROKR2 MUTATED PROKR2 WILD-TYPE
  CLUS_1              0               99
  CLUS_2              1               76
  CLUS_3              0              120
  CLUS_4              0               57
  CLUS_5              1               62
  CLUS_6              1               91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(78) Variable = DNMT3A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNMT3A MUTATED        0      0      0      0
  DNMT3A WILD-TYPE     78     41     64     57
D78V1, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNMT3A MUTATED        0      0      0      0
  DNMT3A WILD-TYPE     63     50     48     79
D78V2, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNMT3A MUTATED        0      0      0      0
  DNMT3A WILD-TYPE     70     98     44     63
D78V3, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNMT3A MUTATED        0      0      0
  DNMT3A WILD-TYPE    138     61     76
D78V4, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNMT3A MUTATED        1     10      0
  DNMT3A WILD-TYPE    291    422     62
D78V5, multiclass
        clus
vv       DNMT3A MUTATED DNMT3A WILD-TYPE
  CLUS_1              1              291
  CLUS_2             10              422
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNMT3A MUTATED        2      5      1      3
  DNMT3A WILD-TYPE    151    218     87    158
D78V6, multiclass
        clus
vv       DNMT3A MUTATED DNMT3A WILD-TYPE
  CLUS_1              2              151
  CLUS_2              5              218
  CLUS_3              1               87
  CLUS_4              3              158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNMT3A MUTATED        3      3      1      1
  DNMT3A WILD-TYPE    182    152    137     94
D78V7, multiclass
        clus
vv       DNMT3A MUTATED DNMT3A WILD-TYPE
  CLUS_1              3              182
  CLUS_2              3              152
  CLUS_3              1              137
  CLUS_4              1               94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNMT3A MUTATED        3      1      4
  DNMT3A WILD-TYPE    202    219    144
D78V8, multiclass
        clus
vv       DNMT3A MUTATED DNMT3A WILD-TYPE
  CLUS_1              3              202
  CLUS_2              1              219
  CLUS_3              4              144
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNMT3A MUTATED        1      5      5
  DNMT3A WILD-TYPE    237    186    223
D78V9, multiclass
        clus
vv       DNMT3A MUTATED DNMT3A WILD-TYPE
  CLUS_1              1              237
  CLUS_2              5              186
  CLUS_3              5              223
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNMT3A MUTATED        0      4      7
  DNMT3A WILD-TYPE    196    187    263
D78V10, multiclass
        clus
vv       DNMT3A MUTATED DNMT3A WILD-TYPE
  CLUS_1              0              196
  CLUS_2              4              187
  CLUS_3              7              263
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNMT3A MUTATED        1      2      1      7
  DNMT3A WILD-TYPE    139    105     82    175
D78V11, multiclass
        clus
vv       DNMT3A MUTATED DNMT3A WILD-TYPE
  CLUS_1              1              139
  CLUS_2              2              105
  CLUS_3              1               82
  CLUS_4              7              175
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNMT3A MUTATED        1      6      4
  DNMT3A WILD-TYPE    222    180     99
D78V12, multiclass
        clus
vv       DNMT3A MUTATED DNMT3A WILD-TYPE
  CLUS_1              1              222
  CLUS_2              6              180
  CLUS_3              4               99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNMT3A MUTATED        3      1      3      4
  DNMT3A WILD-TYPE    124    118    103    152
D78V13, multiclass
        clus
vv       DNMT3A MUTATED DNMT3A WILD-TYPE
  CLUS_1              3              124
  CLUS_2              1              118
  CLUS_3              3              103
  CLUS_4              4              152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DNMT3A MUTATED        1      1      3      1      1      4
  DNMT3A WILD-TYPE     98     76    117     56     62     88
D78V14, multiclass
        clus
vv       DNMT3A MUTATED DNMT3A WILD-TYPE
  CLUS_1              1               98
  CLUS_2              1               76
  CLUS_3              3              117
  CLUS_4              1               56
  CLUS_5              1               62
  CLUS_6              4               88
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(79) Variable = TMEM184A MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM184A MUTATED        0      0      0      0
  TMEM184A WILD-TYPE     78     41     64     57
D79V1, multiclass
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM184A MUTATED        0      0      0      0
  TMEM184A WILD-TYPE     63     50     48     79
D79V2, multiclass
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM184A MUTATED        0      0      0      0
  TMEM184A WILD-TYPE     70     98     44     63
D79V3, multiclass
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM184A MUTATED        0      0      0
  TMEM184A WILD-TYPE    138     61     76
D79V4, multiclass
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM184A MUTATED        1      2      0
  TMEM184A WILD-TYPE    291    430     62
D79V5, multiclass
        clus
vv       TMEM184A MUTATED TMEM184A WILD-TYPE
  CLUS_1                1                291
  CLUS_2                2                430
  CLUS_3                0                 62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM184A MUTATED        1      0      0      2
  TMEM184A WILD-TYPE    152    223     88    159
D79V6, multiclass
        clus
vv       TMEM184A MUTATED TMEM184A WILD-TYPE
  CLUS_1                1                152
  CLUS_2                0                223
  CLUS_3                0                 88
  CLUS_4                2                159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM184A MUTATED        0      1      1      1
  TMEM184A WILD-TYPE    185    154    137     94
D79V7, multiclass
        clus
vv       TMEM184A MUTATED TMEM184A WILD-TYPE
  CLUS_1                0                185
  CLUS_2                1                154
  CLUS_3                1                137
  CLUS_4                1                 94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM184A MUTATED        1      2      0
  TMEM184A WILD-TYPE    204    218    148
D79V8, multiclass
        clus
vv       TMEM184A MUTATED TMEM184A WILD-TYPE
  CLUS_1                1                204
  CLUS_2                2                218
  CLUS_3                0                148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM184A MUTATED        1      2      0
  TMEM184A WILD-TYPE    237    189    228
D79V9, multiclass
        clus
vv       TMEM184A MUTATED TMEM184A WILD-TYPE
  CLUS_1                1                237
  CLUS_2                2                189
  CLUS_3                0                228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM184A MUTATED        1      0      2
  TMEM184A WILD-TYPE    195    191    268
D79V10, multiclass
        clus
vv       TMEM184A MUTATED TMEM184A WILD-TYPE
  CLUS_1                1                195
  CLUS_2                0                191
  CLUS_3                2                268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM184A MUTATED        1      0      0      2
  TMEM184A WILD-TYPE    139    107     83    180
D79V11, multiclass
        clus
vv       TMEM184A MUTATED TMEM184A WILD-TYPE
  CLUS_1                1                139
  CLUS_2                0                107
  CLUS_3                0                 83
  CLUS_4                2                180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM184A MUTATED        0      2      1
  TMEM184A WILD-TYPE    223    184    102
D79V12, multiclass
        clus
vv       TMEM184A MUTATED TMEM184A WILD-TYPE
  CLUS_1                0                223
  CLUS_2                2                184
  CLUS_3                1                102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM184A MUTATED        1      0      0      2
  TMEM184A WILD-TYPE    126    119    106    154
D79V13, multiclass
        clus
vv       TMEM184A MUTATED TMEM184A WILD-TYPE
  CLUS_1                1                126
  CLUS_2                0                119
  CLUS_3                0                106
  CLUS_4                2                154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  TMEM184A MUTATED        0      0      2      0      1      0
  TMEM184A WILD-TYPE     99     77    118     57     62     92
D79V14, multiclass
        clus
vv       TMEM184A MUTATED TMEM184A WILD-TYPE
  CLUS_1                0                 99
  CLUS_2                0                 77
  CLUS_3                2                118
  CLUS_4                0                 57
  CLUS_5                1                 62
  CLUS_6                0                 92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(80) Variable = G6PC MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  G6PC MUTATED        0      1      0      0
  G6PC WILD-TYPE     78     40     64     57
D80V1, multiclass
[1] "Remove cluster labels:" "G6PC MUTATED"          
clus
  G6PC MUTATED G6PC WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0781     TCGA-14-0786     TCGA-14-0787 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-0789     TCGA-14-0790     TCGA-14-0813     TCGA-14-0817 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1456     TCGA-14-1823     TCGA-14-1825 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-14-3476     TCGA-14-4157 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-15-0742     TCGA-15-1444     TCGA-16-0846     TCGA-16-0861 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-16-1045     TCGA-16-1048     TCGA-19-1390     TCGA-19-1790 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-2619     TCGA-19-2620     TCGA-19-2623     TCGA-19-2624 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-2625     TCGA-19-2629     TCGA-19-2631     TCGA-19-4068 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5947     TCGA-19-5950     TCGA-19-5951     TCGA-19-5952 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5954     TCGA-19-5955     TCGA-19-5958     TCGA-19-5959 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1439     TCGA-26-1442     TCGA-26-5132 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-5135     TCGA-26-5136 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-26-5139     TCGA-27-1830     TCGA-27-1831     TCGA-27-1832 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-1833     TCGA-27-1834     TCGA-27-1835     TCGA-27-1836 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-1837     TCGA-27-1838     TCGA-27-2518     TCGA-27-2519 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-2521     TCGA-27-2523     TCGA-27-2524     TCGA-27-2526 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-2527     TCGA-27-2528     TCGA-28-1747     TCGA-28-1753 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-2501     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5213     TCGA-28-5214 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5219 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5220     TCGA-28-6450     TCGA-32-1970     TCGA-32-1977 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-1979     TCGA-32-1980     TCGA-32-1982     TCGA-32-1986 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-1991     TCGA-32-2491     TCGA-32-2494     TCGA-32-2495 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-2615     TCGA-32-2632     TCGA-32-2634     TCGA-32-2638 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-4208     TCGA-32-4209     TCGA-32-4210     TCGA-32-4211 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-4213     TCGA-32-4719     TCGA-41-2571     TCGA-41-2572 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  G6PC MUTATED        0      1      0      0
  G6PC WILD-TYPE     63     49     48     79
D80V2, multiclass
[1] "Remove cluster labels:" "G6PC MUTATED"          
clus
  G6PC MUTATED G6PC WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0781     TCGA-14-0786     TCGA-14-0787 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-0789     TCGA-14-0790     TCGA-14-0813     TCGA-14-0817 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1456     TCGA-14-1823     TCGA-14-1825 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-14-3476     TCGA-14-4157 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-15-0742     TCGA-15-1444     TCGA-16-0846     TCGA-16-0861 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-16-1045     TCGA-16-1048     TCGA-19-1390     TCGA-19-1790 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-2619     TCGA-19-2620     TCGA-19-2623     TCGA-19-2624 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-2625     TCGA-19-2629     TCGA-19-2631     TCGA-19-4068 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5947     TCGA-19-5950     TCGA-19-5951     TCGA-19-5952 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5954     TCGA-19-5955     TCGA-19-5958     TCGA-19-5959 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1439     TCGA-26-1442     TCGA-26-5132 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-5135     TCGA-26-5136 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-26-5139     TCGA-27-1830     TCGA-27-1831     TCGA-27-1832 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-1833     TCGA-27-1834     TCGA-27-1835     TCGA-27-1836 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-1837     TCGA-27-1838     TCGA-27-2518     TCGA-27-2519 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-2521     TCGA-27-2523     TCGA-27-2524     TCGA-27-2526 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-2527     TCGA-27-2528     TCGA-28-1747     TCGA-28-1753 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-2501     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5213     TCGA-28-5214 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5219 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5220     TCGA-28-6450     TCGA-32-1970     TCGA-32-1977 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-1979     TCGA-32-1980     TCGA-32-1982     TCGA-32-1986 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-1991     TCGA-32-2491     TCGA-32-2494     TCGA-32-2495 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-2615     TCGA-32-2632     TCGA-32-2634     TCGA-32-2638 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-4208     TCGA-32-4209     TCGA-32-4210     TCGA-32-4211 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-4213     TCGA-32-4719     TCGA-41-2571     TCGA-41-2572 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  G6PC MUTATED        0      1      0      0
  G6PC WILD-TYPE     70     97     44     63
D80V3, multiclass
[1] "Remove cluster labels:" "G6PC MUTATED"          
clus
  G6PC MUTATED G6PC WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5953 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5954     TCGA-19-5955     TCGA-19-5958     TCGA-19-5959 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1439     TCGA-26-1442     TCGA-26-5132 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-5135     TCGA-26-5136 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-26-5139     TCGA-26-6173     TCGA-26-6174     TCGA-27-1830 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1836     TCGA-27-1837     TCGA-27-1838 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-2518     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2527     TCGA-27-2528 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2502     TCGA-28-2509 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-2510     TCGA-28-2513     TCGA-28-2514     TCGA-28-5204 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5211 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-4719 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  G6PC MUTATED        0      0      1
  G6PC WILD-TYPE    138     61     75
D80V4, multiclass
[1] "Remove cluster labels:" "G6PC MUTATED"          
clus
  G6PC MUTATED G6PC WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5953 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5954     TCGA-19-5955     TCGA-19-5958     TCGA-19-5959 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1439     TCGA-26-1442     TCGA-26-5132 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-5135     TCGA-26-5136 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-26-5139     TCGA-26-6173     TCGA-26-6174     TCGA-27-1830 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1836     TCGA-27-1837     TCGA-27-1838 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-2518     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2527     TCGA-27-2528 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2502     TCGA-28-2509 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-2510     TCGA-28-2513     TCGA-28-2514     TCGA-28-5204 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5211 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-4719 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" "G6PC WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"G6PC WILD-TYPE" "G6PC WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  G6PC MUTATED        3      3      1
  G6PC WILD-TYPE    289    429     61
D80V5, multiclass
        clus
vv       G6PC MUTATED G6PC WILD-TYPE
  CLUS_1            3            289
  CLUS_2            3            429
  CLUS_3            1             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  G6PC MUTATED        3      1      1      2
  G6PC WILD-TYPE    150    222     87    159
D80V6, multiclass
        clus
vv       G6PC MUTATED G6PC WILD-TYPE
  CLUS_1            3            150
  CLUS_2            1            222
  CLUS_3            1             87
  CLUS_4            2            159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  G6PC MUTATED        2      3      0      2
  G6PC WILD-TYPE    183    152    138     93
D80V7, multiclass
        clus
vv       G6PC MUTATED G6PC WILD-TYPE
  CLUS_1            2            183
  CLUS_2            3            152
  CLUS_3            0            138
  CLUS_4            2             93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  G6PC MUTATED        3      3      1
  G6PC WILD-TYPE    202    217    147
D80V8, multiclass
        clus
vv       G6PC MUTATED G6PC WILD-TYPE
  CLUS_1            3            202
  CLUS_2            3            217
  CLUS_3            1            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  G6PC MUTATED        3      2      2
  G6PC WILD-TYPE    235    189    226
D80V9, multiclass
        clus
vv       G6PC MUTATED G6PC WILD-TYPE
  CLUS_1            3            235
  CLUS_2            2            189
  CLUS_3            2            226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  G6PC MUTATED        2      2      3
  G6PC WILD-TYPE    194    189    267
D80V10, multiclass
        clus
vv       G6PC MUTATED G6PC WILD-TYPE
  CLUS_1            2            194
  CLUS_2            2            189
  CLUS_3            3            267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  G6PC MUTATED        0      2      1      3
  G6PC WILD-TYPE    140    105     82    179
D80V11, multiclass
        clus
vv       G6PC MUTATED G6PC WILD-TYPE
  CLUS_1            0            140
  CLUS_2            2            105
  CLUS_3            1             82
  CLUS_4            3            179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  G6PC MUTATED        1      2      3
  G6PC WILD-TYPE    222    184    100
D80V12, multiclass
        clus
vv       G6PC MUTATED G6PC WILD-TYPE
  CLUS_1            1            222
  CLUS_2            2            184
  CLUS_3            3            100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  G6PC MUTATED        1      0      1      4
  G6PC WILD-TYPE    126    119    105    152
D80V13, multiclass
        clus
vv       G6PC MUTATED G6PC WILD-TYPE
  CLUS_1            1            126
  CLUS_2            0            119
  CLUS_3            1            105
  CLUS_4            4            152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  G6PC MUTATED        1      0      3      1      0      1
  G6PC WILD-TYPE     98     77    117     56     63     91
D80V14, multiclass
        clus
vv       G6PC MUTATED G6PC WILD-TYPE
  CLUS_1            1             98
  CLUS_2            0             77
  CLUS_3            3            117
  CLUS_4            1             56
  CLUS_5            0             63
  CLUS_6            1             91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(81) Variable = CYP11A1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CYP11A1 MUTATED        0      0      2      1
  CYP11A1 WILD-TYPE     78     41     62     56
D81V1, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               0                78
  CLUS_2               0                41
  CLUS_3               2                62
  CLUS_4               1                56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CYP11A1 MUTATED        1      0      1      1
  CYP11A1 WILD-TYPE     62     50     47     78
D81V2, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               1                62
  CLUS_2               0                50
  CLUS_3               1                47
  CLUS_4               1                78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CYP11A1 MUTATED        1      2      0      0
  CYP11A1 WILD-TYPE     69     96     44     63
D81V3, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               1                69
  CLUS_2               2                96
  CLUS_3               0                44
  CLUS_4               0                63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CYP11A1 MUTATED        1      0      2
  CYP11A1 WILD-TYPE    137     61     74
D81V4, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               1               137
  CLUS_2               0                61
  CLUS_3               2                74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CYP11A1 MUTATED        3      3      1
  CYP11A1 WILD-TYPE    289    429     61
D81V5, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               3               289
  CLUS_2               3               429
  CLUS_3               1                61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CYP11A1 MUTATED        1      1      1      2
  CYP11A1 WILD-TYPE    152    222     87    159
D81V6, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               1               152
  CLUS_2               1               222
  CLUS_3               1                87
  CLUS_4               2               159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CYP11A1 MUTATED        2      0      2      1
  CYP11A1 WILD-TYPE    183    155    136     94
D81V7, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               2               183
  CLUS_2               0               155
  CLUS_3               2               136
  CLUS_4               1                94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CYP11A1 MUTATED        2      3      0
  CYP11A1 WILD-TYPE    203    217    148
D81V8, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               2               203
  CLUS_2               3               217
  CLUS_3               0               148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CYP11A1 MUTATED        5      2      0
  CYP11A1 WILD-TYPE    233    189    228
D81V9, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               5               233
  CLUS_2               2               189
  CLUS_3               0               228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CYP11A1 MUTATED        4      1      2
  CYP11A1 WILD-TYPE    192    190    268
D81V10, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               4               192
  CLUS_2               1               190
  CLUS_3               2               268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CYP11A1 MUTATED        1      1      1      1
  CYP11A1 WILD-TYPE    139    106     82    181
D81V11, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               1               139
  CLUS_2               1               106
  CLUS_3               1                82
  CLUS_4               1               181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CYP11A1 MUTATED        1      2      1
  CYP11A1 WILD-TYPE    222    184    102
D81V12, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               1               222
  CLUS_2               2               184
  CLUS_3               1               102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CYP11A1 MUTATED        0      2      1      1
  CYP11A1 WILD-TYPE    127    117    105    155
D81V13, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               0               127
  CLUS_2               2               117
  CLUS_3               1               105
  CLUS_4               1               155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  CYP11A1 MUTATED        0      1      1      0      1      1
  CYP11A1 WILD-TYPE     99     76    119     57     62     91
D81V14, multiclass
        clus
vv       CYP11A1 MUTATED CYP11A1 WILD-TYPE
  CLUS_1               0                99
  CLUS_2               1                76
  CLUS_3               1               119
  CLUS_4               0                57
  CLUS_5               1                62
  CLUS_6               1                91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(82) Variable = KRT15 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT15 MUTATED        0      1      1      0
  KRT15 WILD-TYPE     78     40     63     57
D82V1, multiclass
[1] "Remove cluster labels:" "KRT15 MUTATED"         
clus
  KRT15 MUTATED KRT15 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-2470      TCGA-02-2483 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-02-2485      TCGA-02-2486      TCGA-06-0122      TCGA-06-0124 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0126      TCGA-06-0128      TCGA-06-0129      TCGA-06-0130 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0132      TCGA-06-0137      TCGA-06-0139      TCGA-06-0140 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0142      TCGA-06-0145      TCGA-06-0152 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0154      TCGA-06-0155      TCGA-06-0157      TCGA-06-0158 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0166      TCGA-06-0167      TCGA-06-0168      TCGA-06-0169 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0881      TCGA-06-0882 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0939      TCGA-06-1804      TCGA-06-2557      TCGA-06-2558 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2559      TCGA-06-2561      TCGA-06-2562      TCGA-06-2563 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2564      TCGA-06-2565      TCGA-06-2567      TCGA-06-2569 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2570      TCGA-06-5408      TCGA-06-5410      TCGA-06-5411 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5412      TCGA-06-5413      TCGA-06-5414      TCGA-06-5415 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5417      TCGA-06-5418      TCGA-06-5856      TCGA-06-5858 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5859      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0781 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0871      TCGA-14-1456 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5954      TCGA-19-5955 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-5958      TCGA-19-5959      TCGA-19-5960      TCGA-26-1439 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-27-1830 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1836      TCGA-27-1837      TCGA-27-1838 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2527      TCGA-27-2528 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2501      TCGA-28-2502 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-2509      TCGA-28-2510      TCGA-28-2513      TCGA-28-2514 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5204      TCGA-28-5207      TCGA-28-5208      TCGA-28-5209 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT15 MUTATED        1      0      1      0
  KRT15 WILD-TYPE     62     50     47     79
D82V2, multiclass
[1] "Remove cluster labels:" "KRT15 MUTATED"         
clus
  KRT15 MUTATED KRT15 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-2470      TCGA-02-2483 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-02-2485      TCGA-02-2486      TCGA-06-0122      TCGA-06-0124 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0126      TCGA-06-0128      TCGA-06-0129      TCGA-06-0130 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0132      TCGA-06-0137      TCGA-06-0139      TCGA-06-0140 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0142      TCGA-06-0145      TCGA-06-0152 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0154      TCGA-06-0155      TCGA-06-0157      TCGA-06-0158 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0166      TCGA-06-0167      TCGA-06-0168      TCGA-06-0169 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0881      TCGA-06-0882 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0939      TCGA-06-1804      TCGA-06-2557      TCGA-06-2558 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2559      TCGA-06-2561      TCGA-06-2562      TCGA-06-2563 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2564      TCGA-06-2565      TCGA-06-2567      TCGA-06-2569 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2570      TCGA-06-5408      TCGA-06-5410      TCGA-06-5411 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5412      TCGA-06-5413      TCGA-06-5414      TCGA-06-5415 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5417      TCGA-06-5418      TCGA-06-5856      TCGA-06-5858 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5859      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0781 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0871      TCGA-14-1456 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5954      TCGA-19-5955 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-5958      TCGA-19-5959      TCGA-19-5960      TCGA-26-1439 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-27-1830 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1836      TCGA-27-1837      TCGA-27-1838 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2527      TCGA-27-2528 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2501      TCGA-28-2502 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-2509      TCGA-28-2510      TCGA-28-2513      TCGA-28-2514 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5204      TCGA-28-5207      TCGA-28-5208      TCGA-28-5209 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT15 MUTATED        0      1      0      1
  KRT15 WILD-TYPE     70     97     44     62
D82V3, multiclass
[1] "Remove cluster labels:" "KRT15 MUTATED"         
clus
  KRT15 MUTATED KRT15 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0055      TCGA-02-2470 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0137      TCGA-06-0139      TCGA-06-0140 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0142      TCGA-06-0145      TCGA-06-0151 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0168      TCGA-06-0169 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0881      TCGA-06-0882 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0939      TCGA-06-1804      TCGA-06-1806      TCGA-06-2557 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6388      TCGA-06-6389 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-06-6693      TCGA-06-6694 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-6695      TCGA-06-6697      TCGA-06-6698      TCGA-06-6699 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-6700      TCGA-06-6701      TCGA-08-0386      TCGA-12-0616 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0740      TCGA-14-0781      TCGA-14-0786 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-0787      TCGA-14-0789      TCGA-14-0790      TCGA-14-0813 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-0817      TCGA-14-0862      TCGA-14-0871      TCGA-14-1043 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-1395      TCGA-14-1450      TCGA-14-1456      TCGA-14-1823 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-1825      TCGA-14-1829      TCGA-14-2554      TCGA-14-3476 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-4157      TCGA-15-0742      TCGA-15-1444      TCGA-16-0846 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-16-0861      TCGA-16-1045      TCGA-16-1048      TCGA-19-1390 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-1790      TCGA-19-2619      TCGA-19-2620      TCGA-19-2623 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-2624      TCGA-19-2625      TCGA-19-2629      TCGA-19-2631 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-4068      TCGA-19-5947      TCGA-19-5950      TCGA-19-5951 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-5952      TCGA-19-5953      TCGA-19-5954      TCGA-19-5955 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-5958      TCGA-19-5959      TCGA-19-5960      TCGA-26-1439 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-26-6173 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-26-6174      TCGA-27-1830      TCGA-27-1831      TCGA-27-1832 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-1833      TCGA-27-1834      TCGA-27-1835      TCGA-27-1836 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-1837      TCGA-27-1838      TCGA-27-2518      TCGA-27-2519 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-2521      TCGA-27-2523      TCGA-27-2524      TCGA-27-2526 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-2527      TCGA-27-2528      TCGA-28-1747      TCGA-28-1753 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5211      TCGA-28-5213      TCGA-28-5214 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5219 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5220      TCGA-28-6450      TCGA-32-1970      TCGA-32-1977 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-87-5896 
"KRT15 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT15 MUTATED        1      0      1
  KRT15 WILD-TYPE    137     61     75
D82V4, multiclass
[1] "Remove cluster labels:" "KRT15 MUTATED"         
clus
  KRT15 MUTATED KRT15 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0055      TCGA-02-2470 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0137      TCGA-06-0139      TCGA-06-0140 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0142      TCGA-06-0145      TCGA-06-0151 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0168      TCGA-06-0169 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0881      TCGA-06-0882 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-0939      TCGA-06-1804      TCGA-06-1806      TCGA-06-2557 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6388      TCGA-06-6389 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-06-6693      TCGA-06-6694 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-6695      TCGA-06-6697      TCGA-06-6698      TCGA-06-6699 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-06-6700      TCGA-06-6701      TCGA-08-0386      TCGA-12-0616 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0740      TCGA-14-0781      TCGA-14-0786 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-0787      TCGA-14-0789      TCGA-14-0790      TCGA-14-0813 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-0817      TCGA-14-0862      TCGA-14-0871      TCGA-14-1043 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-1395      TCGA-14-1450      TCGA-14-1456      TCGA-14-1823 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-1825      TCGA-14-1829      TCGA-14-2554      TCGA-14-3476 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-14-4157      TCGA-15-0742      TCGA-15-1444      TCGA-16-0846 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-16-0861      TCGA-16-1045      TCGA-16-1048      TCGA-19-1390 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-1790      TCGA-19-2619      TCGA-19-2620      TCGA-19-2623 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-2624      TCGA-19-2625      TCGA-19-2629      TCGA-19-2631 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-4068      TCGA-19-5947      TCGA-19-5950      TCGA-19-5951 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-5952      TCGA-19-5953      TCGA-19-5954      TCGA-19-5955 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-19-5958      TCGA-19-5959      TCGA-19-5960      TCGA-26-1439 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-26-6173 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-26-6174      TCGA-27-1830      TCGA-27-1831      TCGA-27-1832 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-1833      TCGA-27-1834      TCGA-27-1835      TCGA-27-1836 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-1837      TCGA-27-1838      TCGA-27-2518      TCGA-27-2519 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-2521      TCGA-27-2523      TCGA-27-2524      TCGA-27-2526 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-27-2527      TCGA-27-2528      TCGA-28-1747      TCGA-28-1753 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5211      TCGA-28-5213      TCGA-28-5214 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5219 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-28-5220      TCGA-28-6450      TCGA-32-1970      TCGA-32-1977 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" "KRT15 WILD-TYPE" 
     TCGA-87-5896 
"KRT15 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT15 MUTATED        2      6      0
  KRT15 WILD-TYPE    290    426     62
D82V5, multiclass
        clus
vv       KRT15 MUTATED KRT15 WILD-TYPE
  CLUS_1             2             290
  CLUS_2             6             426
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT15 MUTATED        0      3      1      2
  KRT15 WILD-TYPE    153    220     87    159
D82V6, multiclass
        clus
vv       KRT15 MUTATED KRT15 WILD-TYPE
  CLUS_1             0             153
  CLUS_2             3             220
  CLUS_3             1              87
  CLUS_4             2             159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT15 MUTATED        1      1      1      1
  KRT15 WILD-TYPE    184    154    137     94
D82V7, multiclass
        clus
vv       KRT15 MUTATED KRT15 WILD-TYPE
  CLUS_1             1             184
  CLUS_2             1             154
  CLUS_3             1             137
  CLUS_4             1              94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT15 MUTATED        2      1      1
  KRT15 WILD-TYPE    203    219    147
D82V8, multiclass
        clus
vv       KRT15 MUTATED KRT15 WILD-TYPE
  CLUS_1             2             203
  CLUS_2             1             219
  CLUS_3             1             147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT15 MUTATED        3      3      1
  KRT15 WILD-TYPE    235    188    227
D82V9, multiclass
        clus
vv       KRT15 MUTATED KRT15 WILD-TYPE
  CLUS_1             3             235
  CLUS_2             3             188
  CLUS_3             1             227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT15 MUTATED        2      2      3
  KRT15 WILD-TYPE    194    189    267
D82V10, multiclass
        clus
vv       KRT15 MUTATED KRT15 WILD-TYPE
  CLUS_1             2             194
  CLUS_2             2             189
  CLUS_3             3             267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT15 MUTATED        3      0      1      2
  KRT15 WILD-TYPE    137    107     82    180
D82V11, multiclass
        clus
vv       KRT15 MUTATED KRT15 WILD-TYPE
  CLUS_1             3             137
  CLUS_2             0             107
  CLUS_3             1              82
  CLUS_4             2             180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT15 MUTATED        2      3      1
  KRT15 WILD-TYPE    221    183    102
D82V12, multiclass
        clus
vv       KRT15 MUTATED KRT15 WILD-TYPE
  CLUS_1             2             221
  CLUS_2             3             183
  CLUS_3             1             102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT15 MUTATED        1      2      1      2
  KRT15 WILD-TYPE    126    117    105    154
D82V13, multiclass
        clus
vv       KRT15 MUTATED KRT15 WILD-TYPE
  CLUS_1             1             126
  CLUS_2             2             117
  CLUS_3             1             105
  CLUS_4             2             154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  KRT15 MUTATED        1      1      2      1      1      0
  KRT15 WILD-TYPE     98     76    118     56     62     92
D82V14, multiclass
        clus
vv       KRT15 MUTATED KRT15 WILD-TYPE
  CLUS_1             1              98
  CLUS_2             1              76
  CLUS_3             2             118
  CLUS_4             1              56
  CLUS_5             1              62
  CLUS_6             0              92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(83) Variable = CMA1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CMA1 MUTATED        0      0      0      0
  CMA1 WILD-TYPE     78     41     64     57
D83V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CMA1 MUTATED        0      0      0      0
  CMA1 WILD-TYPE     63     50     48     79
D83V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CMA1 MUTATED        0      0      1      0
  CMA1 WILD-TYPE     70     98     43     63
D83V3, multiclass
[1] "Remove cluster labels:" "CMA1 MUTATED"          
clus
  CMA1 MUTATED CMA1 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6701     TCGA-08-0386 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CMA1 MUTATED        1      0      0
  CMA1 WILD-TYPE    137     61     76
D83V4, multiclass
[1] "Remove cluster labels:" "CMA1 MUTATED"          
clus
  CMA1 MUTATED CMA1 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6701     TCGA-08-0386 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CMA1 MUTATED        2      1      0
  CMA1 WILD-TYPE    290    431     62
D83V5, multiclass
        clus
vv       CMA1 MUTATED CMA1 WILD-TYPE
  CLUS_1            2            290
  CLUS_2            1            431
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CMA1 MUTATED        2      1      0      0
  CMA1 WILD-TYPE    151    222     88    161
D83V6, multiclass
        clus
vv       CMA1 MUTATED CMA1 WILD-TYPE
  CLUS_1            2            151
  CLUS_2            1            222
  CLUS_3            0             88
  CLUS_4            0            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CMA1 MUTATED        1      1      1      0
  CMA1 WILD-TYPE    184    154    137     95
D83V7, multiclass
        clus
vv       CMA1 MUTATED CMA1 WILD-TYPE
  CLUS_1            1            184
  CLUS_2            1            154
  CLUS_3            1            137
  CLUS_4            0             95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CMA1 MUTATED        1      1      1
  CMA1 WILD-TYPE    204    219    147
D83V8, multiclass
        clus
vv       CMA1 MUTATED CMA1 WILD-TYPE
  CLUS_1            1            204
  CLUS_2            1            219
  CLUS_3            1            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CMA1 MUTATED        1      0      1
  CMA1 WILD-TYPE    237    191    227
D83V9, multiclass
[1] "Remove cluster labels:" "CMA1 MUTATED"          
clus
  CMA1 MUTATED CMA1 WILD-TYPE 
             2            655 
    TCGA-02-0047     TCGA-02-0055     TCGA-02-2483     TCGA-02-2485 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-02-2486     TCGA-06-0129     TCGA-06-0130     TCGA-06-0132 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0141     TCGA-06-0157     TCGA-06-0158     TCGA-06-0168 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0174     TCGA-06-0178     TCGA-06-0184     TCGA-06-0219 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0238     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0649     TCGA-06-0686     TCGA-06-0743     TCGA-06-0744 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0745     TCGA-06-0747     TCGA-06-0749     TCGA-06-0750 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0878     TCGA-06-0882     TCGA-06-1804     TCGA-06-2557 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-08-0386     TCGA-12-0616 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0821     TCGA-12-1597 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-5299     TCGA-14-0781     TCGA-14-0787     TCGA-14-0789 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0817     TCGA-14-1823     TCGA-14-1825 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-15-0742     TCGA-15-1444 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-1045     TCGA-19-1390     TCGA-19-2619 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1834 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1837     TCGA-27-2519     TCGA-27-2521 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2528 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2499     TCGA-28-2509 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-2510     TCGA-28-2513     TCGA-28-2514     TCGA-28-5204 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5213 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5220 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1980     TCGA-32-1982     TCGA-32-2615 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4213 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-3915 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-76-4925     TCGA-76-4926 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-4932     TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-4943     TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-5394     TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6186     TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6666     TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6670     TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5275     TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5279     TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XA     TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XE     TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64L     TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64R     TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64W     TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A75M     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7011 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A74J     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6     TCGA-P5-A72U 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A736 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX     TCGA-QH-A6CY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CMA1 MUTATED        0      2      0
  CMA1 WILD-TYPE    196    189    270
D83V10, multiclass
[1] "Remove cluster labels:" "CMA1 MUTATED"          
clus
  CMA1 MUTATED CMA1 WILD-TYPE 
             2            655 
    TCGA-02-0047     TCGA-02-0055     TCGA-02-2483     TCGA-02-2485 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-02-2486     TCGA-06-0129     TCGA-06-0130     TCGA-06-0132 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0141     TCGA-06-0157     TCGA-06-0158     TCGA-06-0168 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0174     TCGA-06-0178     TCGA-06-0184     TCGA-06-0219 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0238     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0649     TCGA-06-0686     TCGA-06-0743     TCGA-06-0744 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0745     TCGA-06-0747     TCGA-06-0749     TCGA-06-0750 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-0878     TCGA-06-0882     TCGA-06-1804     TCGA-06-2557 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-08-0386     TCGA-12-0616 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0821     TCGA-12-1597 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-12-5299     TCGA-14-0781     TCGA-14-0787     TCGA-14-0789 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0817     TCGA-14-1823     TCGA-14-1825 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-15-0742     TCGA-15-1444 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-1045     TCGA-19-1390     TCGA-19-2619 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1834 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1837     TCGA-27-2519     TCGA-27-2521 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2528 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2499     TCGA-28-2509 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-2510     TCGA-28-2513     TCGA-28-2514     TCGA-28-5204 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5213 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5220 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1980     TCGA-32-1982     TCGA-32-2615 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4213 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-3915 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-76-4925     TCGA-76-4926 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-76-4932     TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-4943     TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-5394     TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6186     TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6666     TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6670     TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5275     TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5279     TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XA     TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XE     TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64L     TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64R     TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64W     TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A75M     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7011 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A74J     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6     TCGA-P5-A72U 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A736 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX     TCGA-QH-A6CY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CMA1 MUTATED        0      2      0      0
  CMA1 WILD-TYPE    140    105     83    182
D83V11, multiclass
[1] "Remove cluster labels:" "CMA1 MUTATED"          
clus
  CMA1 MUTATED CMA1 WILD-TYPE 
             2            510 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7T8     TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5305     TCGA-E1-5307 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6     TCGA-P5-A72U 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A736 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY     TCGA-QH-A6CZ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5     TCGA-QH-A6X8 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC     TCGA-QH-A86X 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML     TCGA-R8-A6MO 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X     TCGA-RY-A83Y 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843     TCGA-RY-A845 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU     TCGA-S9-A6TV 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY     TCGA-S9-A6TZ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2     TCGA-S9-A6U5 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9     TCGA-S9-A6UA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CMA1 MUTATED        1      0      1
  CMA1 WILD-TYPE    222    186    102
D83V12, multiclass
[1] "Remove cluster labels:" "CMA1 MUTATED"          
clus
  CMA1 MUTATED CMA1 WILD-TYPE 
             2            510 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7T8     TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5305     TCGA-E1-5307 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6     TCGA-P5-A72U 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A736 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY     TCGA-QH-A6CZ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5     TCGA-QH-A6X8 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC     TCGA-QH-A86X 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML     TCGA-R8-A6MO 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X     TCGA-RY-A83Y 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843     TCGA-RY-A845 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU     TCGA-S9-A6TV 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY     TCGA-S9-A6TZ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2     TCGA-S9-A6U5 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9     TCGA-S9-A6UA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CMA1 MUTATED        0      1      0      1
  CMA1 WILD-TYPE    127    118    106    155
D83V13, multiclass
[1] "Remove cluster labels:" "CMA1 MUTATED"          
clus
  CMA1 MUTATED CMA1 WILD-TYPE 
             2            506 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319     TCGA-HW-8320 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ     TCGA-HW-A5KK 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET     TCGA-P5-A5EU 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F2 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6UA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  CMA1 MUTATED        0      1      0      0      0      1
  CMA1 WILD-TYPE     99     76    120     57     63     91
D83V14, multiclass
[1] "Remove cluster labels:" "CMA1 MUTATED"          
clus
  CMA1 MUTATED CMA1 WILD-TYPE 
             2            506 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319     TCGA-HW-8320 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ     TCGA-HW-A5KK 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET     TCGA-P5-A5EU 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F2 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6UA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"CMA1 WILD-TYPE" "CMA1 WILD-TYPE" 

Clustering(84) Variable = MAP3K12 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP3K12 MUTATED        0      0      1      0
  MAP3K12 WILD-TYPE     78     41     63     57
D84V1, multiclass
[1] "Remove cluster labels:" "MAP3K12 MUTATED"       
clus
  MAP3K12 MUTATED MAP3K12 WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-2557 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-2558        TCGA-06-2559        TCGA-06-2561        TCGA-06-2562 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-2563        TCGA-06-2564        TCGA-06-2565        TCGA-06-2567 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-2569        TCGA-06-2570        TCGA-06-5408        TCGA-06-5410 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-5411        TCGA-06-5412        TCGA-06-5413        TCGA-06-5414 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-5415        TCGA-06-5417        TCGA-06-5418        TCGA-06-5856 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-5858        TCGA-06-5859        TCGA-06-6389        TCGA-06-6390 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-6391        TCGA-08-0386        TCGA-12-0616        TCGA-12-0618 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-12-0619        TCGA-12-0688        TCGA-12-0692        TCGA-12-0821 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-12-1597        TCGA-12-3649        TCGA-12-3650        TCGA-12-3652 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-12-3653        TCGA-12-5295        TCGA-12-5299        TCGA-12-5301 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0871 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5954 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1835        TCGA-27-1836        TCGA-27-1837 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-27-1838        TCGA-27-2518        TCGA-27-2519        TCGA-27-2521 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2527 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-27-2528        TCGA-28-1747        TCGA-28-1753        TCGA-28-2501 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP3K12 MUTATED        0      0      1      0
  MAP3K12 WILD-TYPE     63     50     47     79
D84V2, multiclass
[1] "Remove cluster labels:" "MAP3K12 MUTATED"       
clus
  MAP3K12 MUTATED MAP3K12 WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-2557 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-2558        TCGA-06-2559        TCGA-06-2561        TCGA-06-2562 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-2563        TCGA-06-2564        TCGA-06-2565        TCGA-06-2567 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-2569        TCGA-06-2570        TCGA-06-5408        TCGA-06-5410 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-5411        TCGA-06-5412        TCGA-06-5413        TCGA-06-5414 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-5415        TCGA-06-5417        TCGA-06-5418        TCGA-06-5856 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-5858        TCGA-06-5859        TCGA-06-6389        TCGA-06-6390 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-6391        TCGA-08-0386        TCGA-12-0616        TCGA-12-0618 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-12-0619        TCGA-12-0688        TCGA-12-0692        TCGA-12-0821 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-12-1597        TCGA-12-3649        TCGA-12-3650        TCGA-12-3652 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-12-3653        TCGA-12-5295        TCGA-12-5299        TCGA-12-5301 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0871 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5954 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1835        TCGA-27-1836        TCGA-27-1837 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-27-1838        TCGA-27-2518        TCGA-27-2519        TCGA-27-2521 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2527 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-27-2528        TCGA-28-1747        TCGA-28-1753        TCGA-28-2501 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP3K12 MUTATED        0      0      0      1
  MAP3K12 WILD-TYPE     70     98     44     62
D84V3, multiclass
[1] "Remove cluster labels:" "MAP3K12 MUTATED"       
clus
  MAP3K12 MUTATED MAP3K12 WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-1806 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-12-0616        TCGA-12-0618        TCGA-12-0619        TCGA-12-0688 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-12-0692        TCGA-12-0821        TCGA-12-1597        TCGA-12-3649 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-12-3650        TCGA-12-3652        TCGA-12-3653        TCGA-12-5295 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-12-5299        TCGA-12-5301        TCGA-14-0740        TCGA-14-0781 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-14-0786        TCGA-14-0787        TCGA-14-0789        TCGA-14-0790 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0817        TCGA-14-0862        TCGA-14-0871 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-14-1043        TCGA-14-1395        TCGA-14-1450        TCGA-14-1456 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-14-1823        TCGA-14-1825        TCGA-14-1829        TCGA-14-2554 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-14-3476        TCGA-14-4157        TCGA-15-0742        TCGA-15-1444 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-16-0846        TCGA-16-0861        TCGA-16-1045        TCGA-16-1048 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-19-1390        TCGA-19-1790        TCGA-19-2619        TCGA-19-2620 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-19-2623        TCGA-19-2624        TCGA-19-2625        TCGA-19-2629 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-19-2631        TCGA-19-4068        TCGA-19-5947        TCGA-19-5950 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1830        TCGA-27-1831 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-27-1832        TCGA-27-1833        TCGA-27-1834        TCGA-27-1835 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-27-1836        TCGA-27-1837        TCGA-27-1838        TCGA-27-2518 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-27-2519        TCGA-27-2521        TCGA-27-2523        TCGA-27-2524 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-27-2526        TCGA-27-2527        TCGA-27-2528        TCGA-28-1747 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-28-1753        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5207 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5211        TCGA-28-5213 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-28-5214        TCGA-28-5215        TCGA-28-5216        TCGA-28-5218 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-28-5219        TCGA-28-5220        TCGA-28-6450        TCGA-32-1970 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-32-1977        TCGA-32-1979        TCGA-32-1980        TCGA-32-1982 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-32-1986        TCGA-32-1991        TCGA-32-2491        TCGA-32-2494 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-32-2495        TCGA-32-2615        TCGA-32-2632        TCGA-32-2634 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-32-2638        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  MAP3K12 MUTATED        0      1      0
  MAP3K12 WILD-TYPE    138     60     76
D84V4, multiclass
[1] "Remove cluster labels:" "MAP3K12 MUTATED"       
clus
  MAP3K12 MUTATED MAP3K12 WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-1806 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-12-0616        TCGA-12-0618        TCGA-12-0619        TCGA-12-0688 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-12-0692        TCGA-12-0821        TCGA-12-1597        TCGA-12-3649 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-12-3650        TCGA-12-3652        TCGA-12-3653        TCGA-12-5295 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-12-5299        TCGA-12-5301        TCGA-14-0740        TCGA-14-0781 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-14-0786        TCGA-14-0787        TCGA-14-0789        TCGA-14-0790 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0817        TCGA-14-0862        TCGA-14-0871 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-14-1043        TCGA-14-1395        TCGA-14-1450        TCGA-14-1456 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-14-1823        TCGA-14-1825        TCGA-14-1829        TCGA-14-2554 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-14-3476        TCGA-14-4157        TCGA-15-0742        TCGA-15-1444 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-16-0846        TCGA-16-0861        TCGA-16-1045        TCGA-16-1048 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-19-1390        TCGA-19-1790        TCGA-19-2619        TCGA-19-2620 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-19-2623        TCGA-19-2624        TCGA-19-2625        TCGA-19-2629 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-19-2631        TCGA-19-4068        TCGA-19-5947        TCGA-19-5950 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1830        TCGA-27-1831 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-27-1832        TCGA-27-1833        TCGA-27-1834        TCGA-27-1835 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-27-1836        TCGA-27-1837        TCGA-27-1838        TCGA-27-2518 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-27-2519        TCGA-27-2521        TCGA-27-2523        TCGA-27-2524 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-27-2526        TCGA-27-2527        TCGA-27-2528        TCGA-28-1747 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-28-1753        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5207 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5211        TCGA-28-5213 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-28-5214        TCGA-28-5215        TCGA-28-5216        TCGA-28-5218 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-28-5219        TCGA-28-5220        TCGA-28-6450        TCGA-32-1970 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-32-1977        TCGA-32-1979        TCGA-32-1980        TCGA-32-1982 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-32-1986        TCGA-32-1991        TCGA-32-2491        TCGA-32-2494 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-32-2495        TCGA-32-2615        TCGA-32-2632        TCGA-32-2634 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-32-2638        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"MAP3K12 WILD-TYPE" "MAP3K12 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  MAP3K12 MUTATED        2      4      0
  MAP3K12 WILD-TYPE    290    428     62
D84V5, multiclass
        clus
vv       MAP3K12 MUTATED MAP3K12 WILD-TYPE
  CLUS_1               2               290
  CLUS_2               4               428
  CLUS_3               0                62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP3K12 MUTATED        1      1      0      3
  MAP3K12 WILD-TYPE    152    222     88    158
D84V6, multiclass
        clus
vv       MAP3K12 MUTATED MAP3K12 WILD-TYPE
  CLUS_1               1               152
  CLUS_2               1               222
  CLUS_3               0                88
  CLUS_4               3               158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP3K12 MUTATED        3      1      0      1
  MAP3K12 WILD-TYPE    182    154    138     94
D84V7, multiclass
        clus
vv       MAP3K12 MUTATED MAP3K12 WILD-TYPE
  CLUS_1               3               182
  CLUS_2               1               154
  CLUS_3               0               138
  CLUS_4               1                94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  MAP3K12 MUTATED        2      2      1
  MAP3K12 WILD-TYPE    203    218    147
D84V8, multiclass
        clus
vv       MAP3K12 MUTATED MAP3K12 WILD-TYPE
  CLUS_1               2               203
  CLUS_2               2               218
  CLUS_3               1               147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  MAP3K12 MUTATED        1      3      1
  MAP3K12 WILD-TYPE    237    188    227
D84V9, multiclass
        clus
vv       MAP3K12 MUTATED MAP3K12 WILD-TYPE
  CLUS_1               1               237
  CLUS_2               3               188
  CLUS_3               1               227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  MAP3K12 MUTATED        0      2      3
  MAP3K12 WILD-TYPE    196    189    267
D84V10, multiclass
        clus
vv       MAP3K12 MUTATED MAP3K12 WILD-TYPE
  CLUS_1               0               196
  CLUS_2               2               189
  CLUS_3               3               267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP3K12 MUTATED        0      1      1      3
  MAP3K12 WILD-TYPE    140    106     82    179
D84V11, multiclass
        clus
vv       MAP3K12 MUTATED MAP3K12 WILD-TYPE
  CLUS_1               0               140
  CLUS_2               1               106
  CLUS_3               1                82
  CLUS_4               3               179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  MAP3K12 MUTATED        1      3      1
  MAP3K12 WILD-TYPE    222    183    102
D84V12, multiclass
        clus
vv       MAP3K12 MUTATED MAP3K12 WILD-TYPE
  CLUS_1               1               222
  CLUS_2               3               183
  CLUS_3               1               102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP3K12 MUTATED        0      0      2      3
  MAP3K12 WILD-TYPE    127    119    104    153
D84V13, multiclass
        clus
vv       MAP3K12 MUTATED MAP3K12 WILD-TYPE
  CLUS_1               0               127
  CLUS_2               0               119
  CLUS_3               2               104
  CLUS_4               3               153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  MAP3K12 MUTATED        0      0      1      1      0      3
  MAP3K12 WILD-TYPE     99     77    119     56     63     89
D84V14, multiclass
        clus
vv       MAP3K12 MUTATED MAP3K12 WILD-TYPE
  CLUS_1               0                99
  CLUS_2               0                77
  CLUS_3               1               119
  CLUS_4               1                56
  CLUS_5               0                63
  CLUS_6               3                89
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(85) Variable = TREML2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TREML2 MUTATED        0      1      0      2
  TREML2 WILD-TYPE     78     40     64     55
D85V1, multiclass
        clus
vv       TREML2 MUTATED TREML2 WILD-TYPE
  CLUS_1              0               78
  CLUS_2              1               40
  CLUS_3              0               64
  CLUS_4              2               55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TREML2 MUTATED        1      1      0      1
  TREML2 WILD-TYPE     62     49     48     78
D85V2, multiclass
        clus
vv       TREML2 MUTATED TREML2 WILD-TYPE
  CLUS_1              1               62
  CLUS_2              1               49
  CLUS_3              0               48
  CLUS_4              1               78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TREML2 MUTATED        0      2      1      1
  TREML2 WILD-TYPE     70     96     43     62
D85V3, multiclass
        clus
vv       TREML2 MUTATED TREML2 WILD-TYPE
  CLUS_1              0               70
  CLUS_2              2               96
  CLUS_3              1               43
  CLUS_4              1               62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TREML2 MUTATED        3      0      1
  TREML2 WILD-TYPE    135     61     75
D85V4, multiclass
        clus
vv       TREML2 MUTATED TREML2 WILD-TYPE
  CLUS_1              3              135
  CLUS_2              0               61
  CLUS_3              1               75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TREML2 MUTATED        3      3      0
  TREML2 WILD-TYPE    289    429     62
D85V5, multiclass
        clus
vv       TREML2 MUTATED TREML2 WILD-TYPE
  CLUS_1              3              289
  CLUS_2              3              429
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TREML2 MUTATED        2      1      0      1
  TREML2 WILD-TYPE    151    222     88    160
D85V6, multiclass
        clus
vv       TREML2 MUTATED TREML2 WILD-TYPE
  CLUS_1              2              151
  CLUS_2              1              222
  CLUS_3              0               88
  CLUS_4              1              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TREML2 MUTATED        2      2      2      0
  TREML2 WILD-TYPE    183    153    136     95
D85V7, multiclass
        clus
vv       TREML2 MUTATED TREML2 WILD-TYPE
  CLUS_1              2              183
  CLUS_2              2              153
  CLUS_3              2              136
  CLUS_4              0               95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TREML2 MUTATED        2      2      2
  TREML2 WILD-TYPE    203    218    146
D85V8, multiclass
        clus
vv       TREML2 MUTATED TREML2 WILD-TYPE
  CLUS_1              2              203
  CLUS_2              2              218
  CLUS_3              2              146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TREML2 MUTATED        4      1      1
  TREML2 WILD-TYPE    234    190    227
D85V9, multiclass
        clus
vv       TREML2 MUTATED TREML2 WILD-TYPE
  CLUS_1              4              234
  CLUS_2              1              190
  CLUS_3              1              227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TREML2 MUTATED        3      1      2
  TREML2 WILD-TYPE    193    190    268
D85V10, multiclass
        clus
vv       TREML2 MUTATED TREML2 WILD-TYPE
  CLUS_1              3              193
  CLUS_2              1              190
  CLUS_3              2              268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TREML2 MUTATED        0      1      1      1
  TREML2 WILD-TYPE    140    106     82    181
D85V11, multiclass
        clus
vv       TREML2 MUTATED TREML2 WILD-TYPE
  CLUS_1              0              140
  CLUS_2              1              106
  CLUS_3              1               82
  CLUS_4              1              181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TREML2 MUTATED        1      1      1
  TREML2 WILD-TYPE    222    185    102
D85V12, multiclass
        clus
vv       TREML2 MUTATED TREML2 WILD-TYPE
  CLUS_1              1              222
  CLUS_2              1              185
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TREML2 MUTATED        0      0      1      2
  TREML2 WILD-TYPE    127    119    105    154
D85V13, multiclass
        clus
vv       TREML2 MUTATED TREML2 WILD-TYPE
  CLUS_1              0              127
  CLUS_2              0              119
  CLUS_3              1              105
  CLUS_4              2              154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  TREML2 MUTATED        0      0      1      1      0      1
  TREML2 WILD-TYPE     99     77    119     56     63     91
D85V14, multiclass
        clus
vv       TREML2 MUTATED TREML2 WILD-TYPE
  CLUS_1              0               99
  CLUS_2              0               77
  CLUS_3              1              119
  CLUS_4              1               56
  CLUS_5              0               63
  CLUS_6              1               91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(86) Variable = PRCP MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRCP MUTATED        2      0      0      0
  PRCP WILD-TYPE     76     41     64     57
D86V1, multiclass
[1] "Remove cluster labels:" "PRCP MUTATED"          
clus
  PRCP MUTATED PRCP WILD-TYPE 
             2            238 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0124 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0126     TCGA-06-0128     TCGA-06-0129     TCGA-06-0130 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0132     TCGA-06-0137     TCGA-06-0139     TCGA-06-0140 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0141     TCGA-06-0142     TCGA-06-0145     TCGA-06-0152 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0154     TCGA-06-0155     TCGA-06-0157     TCGA-06-0158 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0166     TCGA-06-0167     TCGA-06-0168     TCGA-06-0169 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0173     TCGA-06-0174     TCGA-06-0178     TCGA-06-0184 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0185     TCGA-06-0188     TCGA-06-0189     TCGA-06-0192 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0195     TCGA-06-0213     TCGA-06-0214     TCGA-06-0216 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0219     TCGA-06-0237     TCGA-06-0238     TCGA-06-0240 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-2557 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6282     TCGA-76-6285 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-81-5910     TCGA-87-5896 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRCP MUTATED        1      0      1      0
  PRCP WILD-TYPE     62     50     47     79
D86V2, multiclass
[1] "Remove cluster labels:" "PRCP MUTATED"          
clus
  PRCP MUTATED PRCP WILD-TYPE 
             2            238 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0124 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0126     TCGA-06-0128     TCGA-06-0129     TCGA-06-0130 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0132     TCGA-06-0137     TCGA-06-0139     TCGA-06-0140 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0141     TCGA-06-0142     TCGA-06-0145     TCGA-06-0152 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0154     TCGA-06-0155     TCGA-06-0157     TCGA-06-0158 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0166     TCGA-06-0167     TCGA-06-0168     TCGA-06-0169 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0173     TCGA-06-0174     TCGA-06-0178     TCGA-06-0184 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0185     TCGA-06-0188     TCGA-06-0189     TCGA-06-0192 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0195     TCGA-06-0213     TCGA-06-0214     TCGA-06-0216 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0219     TCGA-06-0237     TCGA-06-0238     TCGA-06-0240 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-2557 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6282     TCGA-76-6285 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-81-5910     TCGA-87-5896 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRCP MUTATED        2      0      0      0
  PRCP WILD-TYPE     68     98     44     63
D86V3, multiclass
[1] "Remove cluster labels:" "PRCP MUTATED"          
clus
  PRCP MUTATED PRCP WILD-TYPE 
             2            273 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0137     TCGA-06-0139     TCGA-06-0140 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0141     TCGA-06-0142     TCGA-06-0145     TCGA-06-0151 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0168     TCGA-06-0169 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0173     TCGA-06-0174     TCGA-06-0178     TCGA-06-0184 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0185     TCGA-06-0188     TCGA-06-0189     TCGA-06-0192 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0195     TCGA-06-0213     TCGA-06-0214     TCGA-06-0216 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0219     TCGA-06-0237     TCGA-06-0238     TCGA-06-0240 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-1806 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6280     TCGA-76-6282 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-87-5896 
"PRCP WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRCP MUTATED        2      0      0
  PRCP WILD-TYPE    136     61     76
D86V4, multiclass
[1] "Remove cluster labels:" "PRCP MUTATED"          
clus
  PRCP MUTATED PRCP WILD-TYPE 
             2            273 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0137     TCGA-06-0139     TCGA-06-0140 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0141     TCGA-06-0142     TCGA-06-0145     TCGA-06-0151 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0168     TCGA-06-0169 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0173     TCGA-06-0174     TCGA-06-0178     TCGA-06-0184 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0185     TCGA-06-0188     TCGA-06-0189     TCGA-06-0192 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0195     TCGA-06-0213     TCGA-06-0214     TCGA-06-0216 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0219     TCGA-06-0237     TCGA-06-0238     TCGA-06-0240 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-1806 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6280     TCGA-76-6282 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-87-5896 
"PRCP WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRCP MUTATED        3      1      0
  PRCP WILD-TYPE    289    431     62
D86V5, multiclass
        clus
vv       PRCP MUTATED PRCP WILD-TYPE
  CLUS_1            3            289
  CLUS_2            1            431
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRCP MUTATED        3      0      0      0
  PRCP WILD-TYPE    150    223     88    161
D86V6, multiclass
        clus
vv       PRCP MUTATED PRCP WILD-TYPE
  CLUS_1            3            150
  CLUS_2            0            223
  CLUS_3            0             88
  CLUS_4            0            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRCP MUTATED        1      1      1      0
  PRCP WILD-TYPE    184    154    137     95
D86V7, multiclass
        clus
vv       PRCP MUTATED PRCP WILD-TYPE
  CLUS_1            1            184
  CLUS_2            1            154
  CLUS_3            1            137
  CLUS_4            0             95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRCP MUTATED        0      1      2
  PRCP WILD-TYPE    205    219    146
D86V8, multiclass
        clus
vv       PRCP MUTATED PRCP WILD-TYPE
  CLUS_1            0            205
  CLUS_2            1            219
  CLUS_3            2            146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRCP MUTATED        2      1      0
  PRCP WILD-TYPE    236    190    228
D86V9, multiclass
        clus
vv       PRCP MUTATED PRCP WILD-TYPE
  CLUS_1            2            236
  CLUS_2            1            190
  CLUS_3            0            228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRCP MUTATED        2      0      1
  PRCP WILD-TYPE    194    191    269
D86V10, multiclass
        clus
vv       PRCP MUTATED PRCP WILD-TYPE
  CLUS_1            2            194
  CLUS_2            0            191
  CLUS_3            1            269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRCP MUTATED        0      0      0      2
  PRCP WILD-TYPE    140    107     83    180
D86V11, multiclass
[1] "Remove cluster labels:" "PRCP MUTATED"          
clus
  PRCP MUTATED PRCP WILD-TYPE 
             2            510 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-6402     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A7T8     TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-A4DS 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6     TCGA-P5-A72U 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A736 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY     TCGA-QH-A6CZ 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5     TCGA-QH-A6X8 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC     TCGA-QH-A86X 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML     TCGA-R8-A6MO 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X     TCGA-RY-A83Y 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843     TCGA-RY-A845 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU     TCGA-S9-A6TV 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY     TCGA-S9-A6TZ 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2     TCGA-S9-A6U5 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9     TCGA-S9-A6UA 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRCP MUTATED        0      0      2
  PRCP WILD-TYPE    223    186    101
D86V12, multiclass
[1] "Remove cluster labels:" "PRCP MUTATED"          
clus
  PRCP MUTATED PRCP WILD-TYPE 
             2            510 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-6402     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A7T8     TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-A4DS 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6     TCGA-P5-A72U 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A736 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY     TCGA-QH-A6CZ 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5     TCGA-QH-A6X8 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC     TCGA-QH-A86X 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML     TCGA-R8-A6MO 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X     TCGA-RY-A83Y 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843     TCGA-RY-A845 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU     TCGA-S9-A6TV 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY     TCGA-S9-A6TZ 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2     TCGA-S9-A6U5 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9     TCGA-S9-A6UA 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRCP MUTATED        1      0      0      1
  PRCP WILD-TYPE    126    119    106    155
D86V13, multiclass
[1] "Remove cluster labels:" "PRCP MUTATED"          
clus
  PRCP MUTATED PRCP WILD-TYPE 
             2            506 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-A4DS     TCGA-HT-A4DV 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319     TCGA-HW-8320 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ     TCGA-HW-A5KK 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET     TCGA-P5-A5EU 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F2 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6UA 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  PRCP MUTATED        0      0      0      0      2      0
  PRCP WILD-TYPE     99     77    120     57     61     92
D86V14, multiclass
[1] "Remove cluster labels:" "PRCP MUTATED"          
clus
  PRCP MUTATED PRCP WILD-TYPE 
             2            506 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-A4DS     TCGA-HT-A4DV 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319     TCGA-HW-8320 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ     TCGA-HW-A5KK 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET     TCGA-P5-A5EU 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F2 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6UA 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" "PRCP WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"PRCP WILD-TYPE" "PRCP WILD-TYPE" 

Clustering(87) Variable = ESR2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ESR2 MUTATED        1      0      1      1
  ESR2 WILD-TYPE     77     41     63     56
D87V1, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            1             77
  CLUS_2            0             41
  CLUS_3            1             63
  CLUS_4            1             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ESR2 MUTATED        0      1      1      1
  ESR2 WILD-TYPE     63     49     47     78
D87V2, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            0             63
  CLUS_2            1             49
  CLUS_3            1             47
  CLUS_4            1             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ESR2 MUTATED        1      1      1      0
  ESR2 WILD-TYPE     69     97     43     63
D87V3, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            1             69
  CLUS_2            1             97
  CLUS_3            1             43
  CLUS_4            0             63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ESR2 MUTATED        3      0      0
  ESR2 WILD-TYPE    135     61     76
D87V4, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            3            135
  CLUS_2            0             61
  CLUS_3            0             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ESR2 MUTATED        3      2      0
  ESR2 WILD-TYPE    289    430     62
D87V5, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            3            289
  CLUS_2            2            430
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ESR2 MUTATED        2      1      0      1
  ESR2 WILD-TYPE    151    222     88    160
D87V6, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            2            151
  CLUS_2            1            222
  CLUS_3            0             88
  CLUS_4            1            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ESR2 MUTATED        3      0      1      1
  ESR2 WILD-TYPE    182    155    137     94
D87V7, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            3            182
  CLUS_2            0            155
  CLUS_3            1            137
  CLUS_4            1             94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ESR2 MUTATED        1      3      1
  ESR2 WILD-TYPE    204    217    147
D87V8, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            1            204
  CLUS_2            3            217
  CLUS_3            1            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ESR2 MUTATED        2      0      2
  ESR2 WILD-TYPE    236    191    226
D87V9, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            2            236
  CLUS_2            0            191
  CLUS_3            2            226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ESR2 MUTATED        1      2      1
  ESR2 WILD-TYPE    195    189    269
D87V10, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            2            189
  CLUS_3            1            269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ESR2 MUTATED        1      2      0      0
  ESR2 WILD-TYPE    139    105     83    182
D87V11, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            1            139
  CLUS_2            2            105
  CLUS_3            0             83
  CLUS_4            0            182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ESR2 MUTATED        2      0      1
  ESR2 WILD-TYPE    221    186    102
D87V12, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            2            221
  CLUS_2            0            186
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ESR2 MUTATED        1      1      0      1
  ESR2 WILD-TYPE    126    118    106    155
D87V13, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            1            126
  CLUS_2            1            118
  CLUS_3            0            106
  CLUS_4            1            155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  ESR2 MUTATED        0      1      0      0      0      2
  ESR2 WILD-TYPE     99     76    120     57     63     90
D87V14, multiclass
        clus
vv       ESR2 MUTATED ESR2 WILD-TYPE
  CLUS_1            0             99
  CLUS_2            1             76
  CLUS_3            0            120
  CLUS_4            0             57
  CLUS_5            0             63
  CLUS_6            2             90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(88) Variable = POM121 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POM121 MUTATED        1      0      0      1
  POM121 WILD-TYPE     77     41     64     56
D88V1, multiclass
[1] "Remove cluster labels:" "POM121 MUTATED"        
clus
  POM121 MUTATED POM121 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0142       TCGA-06-0145       TCGA-06-0152 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0154       TCGA-06-0155       TCGA-06-0157       TCGA-06-0158 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0166       TCGA-06-0167       TCGA-06-0168       TCGA-06-0169 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4213       TCGA-32-4719 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POM121 MUTATED        1      0      0      1
  POM121 WILD-TYPE     62     50     48     78
D88V2, multiclass
[1] "Remove cluster labels:" "POM121 MUTATED"        
clus
  POM121 MUTATED POM121 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0142       TCGA-06-0145       TCGA-06-0152 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0154       TCGA-06-0155       TCGA-06-0157       TCGA-06-0158 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0166       TCGA-06-0167       TCGA-06-0168       TCGA-06-0169 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4213       TCGA-32-4719 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POM121 MUTATED        0      1      0      1
  POM121 WILD-TYPE     70     97     44     62
D88V3, multiclass
[1] "Remove cluster labels:" "POM121 MUTATED"        
clus
  POM121 MUTATED POM121 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0142       TCGA-06-0145       TCGA-06-0151 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0168       TCGA-06-0169 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-1806 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-87-5896 
"POM121 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  POM121 MUTATED        0      1      1
  POM121 WILD-TYPE    138     60     75
D88V4, multiclass
[1] "Remove cluster labels:" "POM121 MUTATED"        
clus
  POM121 MUTATED POM121 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0142       TCGA-06-0145       TCGA-06-0151 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0168       TCGA-06-0169 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-1806 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" "POM121 WILD-TYPE" 
      TCGA-87-5896 
"POM121 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  POM121 MUTATED        2      1      3
  POM121 WILD-TYPE    290    431     59
D88V5, multiclass
        clus
vv       POM121 MUTATED POM121 WILD-TYPE
  CLUS_1              2              290
  CLUS_2              1              431
  CLUS_3              3               59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POM121 MUTATED        2      1      1      0
  POM121 WILD-TYPE    151    222     87    161
D88V6, multiclass
        clus
vv       POM121 MUTATED POM121 WILD-TYPE
  CLUS_1              2              151
  CLUS_2              1              222
  CLUS_3              1               87
  CLUS_4              0              161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POM121 MUTATED        3      1      0      0
  POM121 WILD-TYPE    182    154    138     95
D88V7, multiclass
        clus
vv       POM121 MUTATED POM121 WILD-TYPE
  CLUS_1              3              182
  CLUS_2              1              154
  CLUS_3              0              138
  CLUS_4              0               95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  POM121 MUTATED        3      0      1
  POM121 WILD-TYPE    202    220    147
D88V8, multiclass
        clus
vv       POM121 MUTATED POM121 WILD-TYPE
  CLUS_1              3              202
  CLUS_2              0              220
  CLUS_3              1              147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  POM121 MUTATED        3      1      1
  POM121 WILD-TYPE    235    190    227
D88V9, multiclass
        clus
vv       POM121 MUTATED POM121 WILD-TYPE
  CLUS_1              3              235
  CLUS_2              1              190
  CLUS_3              1              227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  POM121 MUTATED        2      2      1
  POM121 WILD-TYPE    194    189    269
D88V10, multiclass
        clus
vv       POM121 MUTATED POM121 WILD-TYPE
  CLUS_1              2              194
  CLUS_2              2              189
  CLUS_3              1              269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POM121 MUTATED        1      2      0      1
  POM121 WILD-TYPE    139    105     83    181
D88V11, multiclass
        clus
vv       POM121 MUTATED POM121 WILD-TYPE
  CLUS_1              1              139
  CLUS_2              2              105
  CLUS_3              0               83
  CLUS_4              1              181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  POM121 MUTATED        1      1      2
  POM121 WILD-TYPE    222    185    101
D88V12, multiclass
        clus
vv       POM121 MUTATED POM121 WILD-TYPE
  CLUS_1              1              222
  CLUS_2              1              185
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POM121 MUTATED        0      1      1      2
  POM121 WILD-TYPE    127    118    105    154
D88V13, multiclass
        clus
vv       POM121 MUTATED POM121 WILD-TYPE
  CLUS_1              0              127
  CLUS_2              1              118
  CLUS_3              1              105
  CLUS_4              2              154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  POM121 MUTATED        1      0      1      0      1      1
  POM121 WILD-TYPE     98     77    119     57     62     91
D88V14, multiclass
        clus
vv       POM121 MUTATED POM121 WILD-TYPE
  CLUS_1              1               98
  CLUS_2              0               77
  CLUS_3              1              119
  CLUS_4              0               57
  CLUS_5              1               62
  CLUS_6              1               91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(89) Variable = MACC1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MACC1 MUTATED        1      0      2      0
  MACC1 WILD-TYPE     77     41     62     57
D89V1, multiclass
        clus
vv       MACC1 MUTATED MACC1 WILD-TYPE
  CLUS_1             1              77
  CLUS_2             0              41
  CLUS_3             2              62
  CLUS_4             0              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MACC1 MUTATED        1      0      2      0
  MACC1 WILD-TYPE     62     50     46     79
D89V2, multiclass
        clus
vv       MACC1 MUTATED MACC1 WILD-TYPE
  CLUS_1             1              62
  CLUS_2             0              50
  CLUS_3             2              46
  CLUS_4             0              79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MACC1 MUTATED        1      0      0      3
  MACC1 WILD-TYPE     69     98     44     60
D89V3, multiclass
        clus
vv       MACC1 MUTATED MACC1 WILD-TYPE
  CLUS_1             1              69
  CLUS_2             0              98
  CLUS_3             0              44
  CLUS_4             3              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MACC1 MUTATED        2      2      0
  MACC1 WILD-TYPE    136     59     76
D89V4, multiclass
        clus
vv       MACC1 MUTATED MACC1 WILD-TYPE
  CLUS_1             2             136
  CLUS_2             2              59
  CLUS_3             0              76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MACC1 MUTATED        6      2      0
  MACC1 WILD-TYPE    286    430     62
D89V5, multiclass
        clus
vv       MACC1 MUTATED MACC1 WILD-TYPE
  CLUS_1             6             286
  CLUS_2             2             430
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MACC1 MUTATED        4      2      0      0
  MACC1 WILD-TYPE    149    221     88    161
D89V6, multiclass
        clus
vv       MACC1 MUTATED MACC1 WILD-TYPE
  CLUS_1             4             149
  CLUS_2             2             221
  CLUS_3             0              88
  CLUS_4             0             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MACC1 MUTATED        1      0      1      3
  MACC1 WILD-TYPE    184    155    137     92
D89V7, multiclass
        clus
vv       MACC1 MUTATED MACC1 WILD-TYPE
  CLUS_1             1             184
  CLUS_2             0             155
  CLUS_3             1             137
  CLUS_4             3              92
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MACC1 MUTATED        4      1      0
  MACC1 WILD-TYPE    201    219    148
D89V8, multiclass
        clus
vv       MACC1 MUTATED MACC1 WILD-TYPE
  CLUS_1             4             201
  CLUS_2             1             219
  CLUS_3             0             148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MACC1 MUTATED        4      0      2
  MACC1 WILD-TYPE    234    191    226
D89V9, multiclass
        clus
vv       MACC1 MUTATED MACC1 WILD-TYPE
  CLUS_1             4             234
  CLUS_2             0             191
  CLUS_3             2             226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MACC1 MUTATED        3      3      0
  MACC1 WILD-TYPE    193    188    270
D89V10, multiclass
        clus
vv       MACC1 MUTATED MACC1 WILD-TYPE
  CLUS_1             3             193
  CLUS_2             3             188
  CLUS_3             0             270
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MACC1 MUTATED        1      2      1      0
  MACC1 WILD-TYPE    139    105     82    182
D89V11, multiclass
        clus
vv       MACC1 MUTATED MACC1 WILD-TYPE
  CLUS_1             1             139
  CLUS_2             2             105
  CLUS_3             1              82
  CLUS_4             0             182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MACC1 MUTATED        2      0      2
  MACC1 WILD-TYPE    221    186    101
D89V12, multiclass
        clus
vv       MACC1 MUTATED MACC1 WILD-TYPE
  CLUS_1             2             221
  CLUS_2             0             186
  CLUS_3             2             101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MACC1 MUTATED        1      1      1      1
  MACC1 WILD-TYPE    126    118    105    155
D89V13, multiclass
        clus
vv       MACC1 MUTATED MACC1 WILD-TYPE
  CLUS_1             1             126
  CLUS_2             1             118
  CLUS_3             1             105
  CLUS_4             1             155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  MACC1 MUTATED        1      1      0      0      1      1
  MACC1 WILD-TYPE     98     76    120     57     62     91
D89V14, multiclass
        clus
vv       MACC1 MUTATED MACC1 WILD-TYPE
  CLUS_1             1              98
  CLUS_2             1              76
  CLUS_3             0             120
  CLUS_4             0              57
  CLUS_5             1              62
  CLUS_6             1              91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(90) Variable = QKI MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  QKI MUTATED        4      0      0      1
  QKI WILD-TYPE     74     41     64     56
D90V1, multiclass
        clus
vv       QKI MUTATED QKI WILD-TYPE
  CLUS_1           4            74
  CLUS_2           0            41
  CLUS_3           0            64
  CLUS_4           1            56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  QKI MUTATED        4      0      0      1
  QKI WILD-TYPE     59     50     48     78
D90V2, multiclass
        clus
vv       QKI MUTATED QKI WILD-TYPE
  CLUS_1           4            59
  CLUS_2           0            50
  CLUS_3           0            48
  CLUS_4           1            78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  QKI MUTATED        1      2      0      2
  QKI WILD-TYPE     69     96     44     61
D90V3, multiclass
        clus
vv       QKI MUTATED QKI WILD-TYPE
  CLUS_1           1            69
  CLUS_2           2            96
  CLUS_3           0            44
  CLUS_4           2            61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  QKI MUTATED        3      1      1
  QKI WILD-TYPE    135     60     75
D90V4, multiclass
        clus
vv       QKI MUTATED QKI WILD-TYPE
  CLUS_1           3           135
  CLUS_2           1            60
  CLUS_3           1            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  QKI MUTATED        4      1      1
  QKI WILD-TYPE    288    431     61
D90V5, multiclass
        clus
vv       QKI MUTATED QKI WILD-TYPE
  CLUS_1           4           288
  CLUS_2           1           431
  CLUS_3           1            61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  QKI MUTATED        2      1      1      0
  QKI WILD-TYPE    151    222     87    161
D90V6, multiclass
        clus
vv       QKI MUTATED QKI WILD-TYPE
  CLUS_1           2           151
  CLUS_2           1           222
  CLUS_3           1            87
  CLUS_4           0           161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  QKI MUTATED        2      1      1      0
  QKI WILD-TYPE    183    154    137     95
D90V7, multiclass
        clus
vv       QKI MUTATED QKI WILD-TYPE
  CLUS_1           2           183
  CLUS_2           1           154
  CLUS_3           1           137
  CLUS_4           0            95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  QKI MUTATED        1      1      2
  QKI WILD-TYPE    204    219    146
D90V8, multiclass
        clus
vv       QKI MUTATED QKI WILD-TYPE
  CLUS_1           1           204
  CLUS_2           1           219
  CLUS_3           2           146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  QKI MUTATED        2      0      1
  QKI WILD-TYPE    236    191    227
D90V9, multiclass
        clus
vv       QKI MUTATED QKI WILD-TYPE
  CLUS_1           2           236
  CLUS_2           0           191
  CLUS_3           1           227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  QKI MUTATED        2      1      0
  QKI WILD-TYPE    194    190    270
D90V10, multiclass
        clus
vv       QKI MUTATED QKI WILD-TYPE
  CLUS_1           2           194
  CLUS_2           1           190
  CLUS_3           0           270
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  QKI MUTATED        0      0      0      1
  QKI WILD-TYPE    140    107     83    181
D90V11, multiclass
[1] "Remove cluster labels:" "QKI MUTATED"           
clus
  QKI MUTATED QKI WILD-TYPE 
            1           511 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5280    TCGA-DB-5281 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A4X9    TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A4XE    TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A64O    TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A64U    TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A75L    TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-5142    TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-A66D    TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-A7UT    TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-5851    TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-5870    TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6393    TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6399    TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6404    TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6410    TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7009    TCGA-DU-7010    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7014 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7015    TCGA-DU-7018    TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7292 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7294    TCGA-DU-7298    TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7302    TCGA-DU-7304    TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-8161    TCGA-DU-8162    TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-8166    TCGA-DU-8167    TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A5TS    TCGA-DU-A5TT    TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A6S2    TCGA-DU-A6S3    TCGA-DU-A6S6    TCGA-DU-A6S7    TCGA-DU-A6S8 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A76K    TCGA-DU-A76L    TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A7T8    TCGA-DU-A7TA    TCGA-DU-A7TB    TCGA-DU-A7TC    TCGA-DU-A7TD 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A7TG    TCGA-DU-A7TI    TCGA-DU-A7TJ    TCGA-E1-5302    TCGA-E1-5303 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-5304    TCGA-E1-5305    TCGA-E1-5307    TCGA-E1-5311    TCGA-E1-5318 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-5319    TCGA-E1-5322    TCGA-E1-A7YD    TCGA-E1-A7YE    TCGA-E1-A7YH 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YI    TCGA-E1-A7YJ    TCGA-E1-A7YK    TCGA-E1-A7YL    TCGA-E1-A7YM 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YN    TCGA-E1-A7YO    TCGA-E1-A7YQ    TCGA-E1-A7YS    TCGA-E1-A7YU 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YV    TCGA-E1-A7YW    TCGA-E1-A7YY    TCGA-E1-A7Z2    TCGA-E1-A7Z3 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7Z4    TCGA-E1-A7Z6    TCGA-EZ-7264    TCGA-F6-A8O3    TCGA-F6-A8O4 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-5962    TCGA-FG-5963    TCGA-FG-5964    TCGA-FG-6688    TCGA-FG-6689 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-6690    TCGA-FG-6691    TCGA-FG-6692    TCGA-FG-7634    TCGA-FG-7636 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-7637    TCGA-FG-7638    TCGA-FG-7641    TCGA-FG-7643    TCGA-FG-8181 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-8182    TCGA-FG-8185    TCGA-FG-8186    TCGA-FG-8187    TCGA-FG-8188 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-8189    TCGA-FG-8191    TCGA-FG-A4MT    TCGA-FG-A4MU    TCGA-FG-A4MW 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A4MX    TCGA-FG-A4MY    TCGA-FG-A60J    TCGA-FG-A60K    TCGA-FG-A60L 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A6IZ    TCGA-FG-A6J1    TCGA-FG-A6J3    TCGA-FG-A70Y    TCGA-FG-A70Z 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A710    TCGA-FG-A711    TCGA-FG-A713    TCGA-FG-A87N    TCGA-FG-A87Q 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FN-7833    TCGA-HT-7467    TCGA-HT-7468    TCGA-HT-7469    TCGA-HT-7470 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7471    TCGA-HT-7472    TCGA-HT-7473    TCGA-HT-7474    TCGA-HT-7475 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7476    TCGA-HT-7477    TCGA-HT-7478    TCGA-HT-7479    TCGA-HT-7480 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7481    TCGA-HT-7482    TCGA-HT-7483    TCGA-HT-7485    TCGA-HT-7601 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7602    TCGA-HT-7603    TCGA-HT-7604    TCGA-HT-7605    TCGA-HT-7606 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7607    TCGA-HT-7608    TCGA-HT-7609    TCGA-HT-7610    TCGA-HT-7611 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7616    TCGA-HT-7620    TCGA-HT-7676    TCGA-HT-7677    TCGA-HT-7680 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7681    TCGA-HT-7684    TCGA-HT-7686    TCGA-HT-7687    TCGA-HT-7688 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7689    TCGA-HT-7690    TCGA-HT-7691    TCGA-HT-7692    TCGA-HT-7693 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7694    TCGA-HT-7695    TCGA-HT-7854    TCGA-HT-7855    TCGA-HT-7856 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7857    TCGA-HT-7858    TCGA-HT-7860    TCGA-HT-7873    TCGA-HT-7874 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7875    TCGA-HT-7877    TCGA-HT-7879    TCGA-HT-7880    TCGA-HT-7881 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7882    TCGA-HT-7884    TCGA-HT-7902    TCGA-HT-8010    TCGA-HT-8011 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8012    TCGA-HT-8013    TCGA-HT-8015    TCGA-HT-8018    TCGA-HT-8019 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8104    TCGA-HT-8105    TCGA-HT-8106    TCGA-HT-8107    TCGA-HT-8108 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8109    TCGA-HT-8110    TCGA-HT-8111    TCGA-HT-8113    TCGA-HT-8114 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8558    TCGA-HT-8563    TCGA-HT-8564    TCGA-HT-A4DS    TCGA-HT-A4DV 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A5R5    TCGA-HT-A5R7    TCGA-HT-A5R9    TCGA-HT-A5RA    TCGA-HT-A5RB 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A5RC    TCGA-HT-A614    TCGA-HT-A615    TCGA-HT-A616    TCGA-HT-A617 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A618    TCGA-HT-A619    TCGA-HT-A61A    TCGA-HT-A61B    TCGA-HT-A61C 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A74H    TCGA-HT-A74K    TCGA-HT-A74L    TCGA-HT-A74O    TCGA-HW-7486 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HW-7487    TCGA-HW-7489    TCGA-HW-7490    TCGA-HW-7491    TCGA-HW-7493 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HW-7495    TCGA-HW-8319    TCGA-HW-8320    TCGA-HW-8321    TCGA-HW-8322 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HW-A5KJ    TCGA-HW-A5KK    TCGA-HW-A5KL    TCGA-HW-A5KM    TCGA-IK-7675 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-IK-8125    TCGA-KT-A74X    TCGA-KT-A7W1    TCGA-P5-A5ET    TCGA-P5-A5EU 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A5EV    TCGA-P5-A5EW    TCGA-P5-A5EX    TCGA-P5-A5EY    TCGA-P5-A5EZ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A5F0    TCGA-P5-A5F1    TCGA-P5-A5F2    TCGA-P5-A5F4    TCGA-P5-A5F6 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A72U    TCGA-P5-A72W    TCGA-P5-A72X    TCGA-P5-A72Z    TCGA-P5-A730 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A731    TCGA-P5-A733    TCGA-P5-A735    TCGA-P5-A736    TCGA-P5-A737 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A77W    TCGA-P5-A77X    TCGA-P5-A780    TCGA-P5-A781    TCGA-QH-A65R 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A65S    TCGA-QH-A65V    TCGA-QH-A65X    TCGA-QH-A65Z    TCGA-QH-A6CS 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A6CU    TCGA-QH-A6CV    TCGA-QH-A6CX    TCGA-QH-A6CY    TCGA-QH-A6CZ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A6X3    TCGA-QH-A6X4    TCGA-QH-A6X5    TCGA-QH-A6X8    TCGA-QH-A6X9 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A6XA    TCGA-QH-A6XC    TCGA-QH-A86X    TCGA-QH-A870    TCGA-R8-A6MK 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-R8-A6ML    TCGA-R8-A6MO    TCGA-R8-A6YH    TCGA-R8-A73M    TCGA-RY-A83X 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-RY-A83Y    TCGA-RY-A83Z    TCGA-RY-A840    TCGA-RY-A843    TCGA-RY-A845 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-RY-A847    TCGA-S9-A6TS    TCGA-S9-A6TU    TCGA-S9-A6TV    TCGA-S9-A6TW 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6TX    TCGA-S9-A6TY    TCGA-S9-A6TZ    TCGA-S9-A6U0    TCGA-S9-A6U1 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6U2    TCGA-S9-A6U5    TCGA-S9-A6U6    TCGA-S9-A6U8    TCGA-S9-A6U9 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6UA    TCGA-S9-A6UB    TCGA-S9-A6WD    TCGA-S9-A6WE    TCGA-S9-A6WG 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6WH    TCGA-S9-A6WI    TCGA-S9-A6WL    TCGA-S9-A6WM    TCGA-S9-A6WN 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6WO    TCGA-S9-A6WP    TCGA-S9-A6WQ    TCGA-S9-A7IQ    TCGA-S9-A7IS 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7IX    TCGA-S9-A7IY    TCGA-S9-A7IZ    TCGA-S9-A7J0    TCGA-S9-A7J1 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7J2    TCGA-S9-A7J3    TCGA-S9-A7QW    TCGA-S9-A7QX    TCGA-S9-A7QY 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7QZ    TCGA-S9-A7R1    TCGA-S9-A7R2    TCGA-S9-A7R3    TCGA-S9-A7R4 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7R7    TCGA-S9-A7R8    TCGA-S9-A89V    TCGA-S9-A89Z    TCGA-TM-A7C3 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A7C4    TCGA-TM-A7C5    TCGA-TM-A7CA    TCGA-TM-A7CF    TCGA-TM-A84B 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A84C    TCGA-TM-A84F    TCGA-TM-A84G    TCGA-TM-A84H    TCGA-TM-A84I 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A84J    TCGA-TM-A84L    TCGA-TM-A84M    TCGA-TM-A84O    TCGA-TM-A84Q 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A84R    TCGA-TM-A84S    TCGA-TM-A84T    TCGA-TQ-A7RF    TCGA-TQ-A7RG 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RH    TCGA-TQ-A7RI    TCGA-TQ-A7RJ    TCGA-TQ-A7RK    TCGA-TQ-A7RM 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RN    TCGA-TQ-A7RO    TCGA-TQ-A7RP    TCGA-TQ-A7RQ    TCGA-TQ-A7RR 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RS    TCGA-TQ-A7RU    TCGA-TQ-A7RV    TCGA-TQ-A7RW    TCGA-TQ-A8XE 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-VM-A8C8    TCGA-VM-A8C9    TCGA-VM-A8CA    TCGA-VM-A8CB    TCGA-VM-A8CD 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-VM-A8CE    TCGA-VM-A8CF    TCGA-VM-A8CH    TCGA-VV-A829    TCGA-VV-A86M 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-VW-A7QS    TCGA-VW-A8FI    TCGA-W9-A837    TCGA-WH-A86K    TCGA-WY-A858 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-WY-A859    TCGA-WY-A85A    TCGA-WY-A85B    TCGA-WY-A85C    TCGA-WY-A85D 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-WY-A85E 
"QKI WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  QKI MUTATED        0      1      0
  QKI WILD-TYPE    223    185    103
D90V12, multiclass
[1] "Remove cluster labels:" "QKI MUTATED"           
clus
  QKI MUTATED QKI WILD-TYPE 
            1           511 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5280    TCGA-DB-5281 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A4X9    TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A4XE    TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A64O    TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A64U    TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A75L    TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-5142    TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-A66D    TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-A7UT    TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-5851    TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-5870    TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6393    TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6399    TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6404    TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6410    TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7009    TCGA-DU-7010    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7014 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7015    TCGA-DU-7018    TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7292 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7294    TCGA-DU-7298    TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7302    TCGA-DU-7304    TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-8161    TCGA-DU-8162    TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-8166    TCGA-DU-8167    TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A5TS    TCGA-DU-A5TT    TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A6S2    TCGA-DU-A6S3    TCGA-DU-A6S6    TCGA-DU-A6S7    TCGA-DU-A6S8 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A76K    TCGA-DU-A76L    TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A7T8    TCGA-DU-A7TA    TCGA-DU-A7TB    TCGA-DU-A7TC    TCGA-DU-A7TD 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A7TG    TCGA-DU-A7TI    TCGA-DU-A7TJ    TCGA-E1-5302    TCGA-E1-5303 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-5304    TCGA-E1-5305    TCGA-E1-5307    TCGA-E1-5311    TCGA-E1-5318 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-5319    TCGA-E1-5322    TCGA-E1-A7YD    TCGA-E1-A7YE    TCGA-E1-A7YH 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YI    TCGA-E1-A7YJ    TCGA-E1-A7YK    TCGA-E1-A7YL    TCGA-E1-A7YM 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YN    TCGA-E1-A7YO    TCGA-E1-A7YQ    TCGA-E1-A7YS    TCGA-E1-A7YU 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YV    TCGA-E1-A7YW    TCGA-E1-A7YY    TCGA-E1-A7Z2    TCGA-E1-A7Z3 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7Z4    TCGA-E1-A7Z6    TCGA-EZ-7264    TCGA-F6-A8O3    TCGA-F6-A8O4 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-5962    TCGA-FG-5963    TCGA-FG-5964    TCGA-FG-6688    TCGA-FG-6689 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-6690    TCGA-FG-6691    TCGA-FG-6692    TCGA-FG-7634    TCGA-FG-7636 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-7637    TCGA-FG-7638    TCGA-FG-7641    TCGA-FG-7643    TCGA-FG-8181 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-8182    TCGA-FG-8185    TCGA-FG-8186    TCGA-FG-8187    TCGA-FG-8188 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-8189    TCGA-FG-8191    TCGA-FG-A4MT    TCGA-FG-A4MU    TCGA-FG-A4MW 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A4MX    TCGA-FG-A4MY    TCGA-FG-A60J    TCGA-FG-A60K    TCGA-FG-A60L 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A6IZ    TCGA-FG-A6J1    TCGA-FG-A6J3    TCGA-FG-A70Y    TCGA-FG-A70Z 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A710    TCGA-FG-A711    TCGA-FG-A713    TCGA-FG-A87N    TCGA-FG-A87Q 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FN-7833    TCGA-HT-7467    TCGA-HT-7468    TCGA-HT-7469    TCGA-HT-7470 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7471    TCGA-HT-7472    TCGA-HT-7473    TCGA-HT-7474    TCGA-HT-7475 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7476    TCGA-HT-7477    TCGA-HT-7478    TCGA-HT-7479    TCGA-HT-7480 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7481    TCGA-HT-7482    TCGA-HT-7483    TCGA-HT-7485    TCGA-HT-7601 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7602    TCGA-HT-7603    TCGA-HT-7604    TCGA-HT-7605    TCGA-HT-7606 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7607    TCGA-HT-7608    TCGA-HT-7609    TCGA-HT-7610    TCGA-HT-7611 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7616    TCGA-HT-7620    TCGA-HT-7676    TCGA-HT-7677    TCGA-HT-7680 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7681    TCGA-HT-7684    TCGA-HT-7686    TCGA-HT-7687    TCGA-HT-7688 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7689    TCGA-HT-7690    TCGA-HT-7691    TCGA-HT-7692    TCGA-HT-7693 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7694    TCGA-HT-7695    TCGA-HT-7854    TCGA-HT-7855    TCGA-HT-7856 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7857    TCGA-HT-7858    TCGA-HT-7860    TCGA-HT-7873    TCGA-HT-7874 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7875    TCGA-HT-7877    TCGA-HT-7879    TCGA-HT-7880    TCGA-HT-7881 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7882    TCGA-HT-7884    TCGA-HT-7902    TCGA-HT-8010    TCGA-HT-8011 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8012    TCGA-HT-8013    TCGA-HT-8015    TCGA-HT-8018    TCGA-HT-8019 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8104    TCGA-HT-8105    TCGA-HT-8106    TCGA-HT-8107    TCGA-HT-8108 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8109    TCGA-HT-8110    TCGA-HT-8111    TCGA-HT-8113    TCGA-HT-8114 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8558    TCGA-HT-8563    TCGA-HT-8564    TCGA-HT-A4DS    TCGA-HT-A4DV 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A5R5    TCGA-HT-A5R7    TCGA-HT-A5R9    TCGA-HT-A5RA    TCGA-HT-A5RB 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A5RC    TCGA-HT-A614    TCGA-HT-A615    TCGA-HT-A616    TCGA-HT-A617 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A618    TCGA-HT-A619    TCGA-HT-A61A    TCGA-HT-A61B    TCGA-HT-A61C 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A74H    TCGA-HT-A74K    TCGA-HT-A74L    TCGA-HT-A74O    TCGA-HW-7486 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HW-7487    TCGA-HW-7489    TCGA-HW-7490    TCGA-HW-7491    TCGA-HW-7493 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HW-7495    TCGA-HW-8319    TCGA-HW-8320    TCGA-HW-8321    TCGA-HW-8322 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HW-A5KJ    TCGA-HW-A5KK    TCGA-HW-A5KL    TCGA-HW-A5KM    TCGA-IK-7675 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-IK-8125    TCGA-KT-A74X    TCGA-KT-A7W1    TCGA-P5-A5ET    TCGA-P5-A5EU 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A5EV    TCGA-P5-A5EW    TCGA-P5-A5EX    TCGA-P5-A5EY    TCGA-P5-A5EZ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A5F0    TCGA-P5-A5F1    TCGA-P5-A5F2    TCGA-P5-A5F4    TCGA-P5-A5F6 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A72U    TCGA-P5-A72W    TCGA-P5-A72X    TCGA-P5-A72Z    TCGA-P5-A730 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A731    TCGA-P5-A733    TCGA-P5-A735    TCGA-P5-A736    TCGA-P5-A737 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A77W    TCGA-P5-A77X    TCGA-P5-A780    TCGA-P5-A781    TCGA-QH-A65R 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A65S    TCGA-QH-A65V    TCGA-QH-A65X    TCGA-QH-A65Z    TCGA-QH-A6CS 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A6CU    TCGA-QH-A6CV    TCGA-QH-A6CX    TCGA-QH-A6CY    TCGA-QH-A6CZ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A6X3    TCGA-QH-A6X4    TCGA-QH-A6X5    TCGA-QH-A6X8    TCGA-QH-A6X9 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A6XA    TCGA-QH-A6XC    TCGA-QH-A86X    TCGA-QH-A870    TCGA-R8-A6MK 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-R8-A6ML    TCGA-R8-A6MO    TCGA-R8-A6YH    TCGA-R8-A73M    TCGA-RY-A83X 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-RY-A83Y    TCGA-RY-A83Z    TCGA-RY-A840    TCGA-RY-A843    TCGA-RY-A845 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-RY-A847    TCGA-S9-A6TS    TCGA-S9-A6TU    TCGA-S9-A6TV    TCGA-S9-A6TW 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6TX    TCGA-S9-A6TY    TCGA-S9-A6TZ    TCGA-S9-A6U0    TCGA-S9-A6U1 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6U2    TCGA-S9-A6U5    TCGA-S9-A6U6    TCGA-S9-A6U8    TCGA-S9-A6U9 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6UA    TCGA-S9-A6UB    TCGA-S9-A6WD    TCGA-S9-A6WE    TCGA-S9-A6WG 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6WH    TCGA-S9-A6WI    TCGA-S9-A6WL    TCGA-S9-A6WM    TCGA-S9-A6WN 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6WO    TCGA-S9-A6WP    TCGA-S9-A6WQ    TCGA-S9-A7IQ    TCGA-S9-A7IS 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7IX    TCGA-S9-A7IY    TCGA-S9-A7IZ    TCGA-S9-A7J0    TCGA-S9-A7J1 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7J2    TCGA-S9-A7J3    TCGA-S9-A7QW    TCGA-S9-A7QX    TCGA-S9-A7QY 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7QZ    TCGA-S9-A7R1    TCGA-S9-A7R2    TCGA-S9-A7R3    TCGA-S9-A7R4 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7R7    TCGA-S9-A7R8    TCGA-S9-A89V    TCGA-S9-A89Z    TCGA-TM-A7C3 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A7C4    TCGA-TM-A7C5    TCGA-TM-A7CA    TCGA-TM-A7CF    TCGA-TM-A84B 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A84C    TCGA-TM-A84F    TCGA-TM-A84G    TCGA-TM-A84H    TCGA-TM-A84I 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A84J    TCGA-TM-A84L    TCGA-TM-A84M    TCGA-TM-A84O    TCGA-TM-A84Q 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A84R    TCGA-TM-A84S    TCGA-TM-A84T    TCGA-TQ-A7RF    TCGA-TQ-A7RG 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RH    TCGA-TQ-A7RI    TCGA-TQ-A7RJ    TCGA-TQ-A7RK    TCGA-TQ-A7RM 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RN    TCGA-TQ-A7RO    TCGA-TQ-A7RP    TCGA-TQ-A7RQ    TCGA-TQ-A7RR 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RS    TCGA-TQ-A7RU    TCGA-TQ-A7RV    TCGA-TQ-A7RW    TCGA-TQ-A8XE 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-VM-A8C8    TCGA-VM-A8C9    TCGA-VM-A8CA    TCGA-VM-A8CB    TCGA-VM-A8CD 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-VM-A8CE    TCGA-VM-A8CF    TCGA-VM-A8CH    TCGA-VV-A829    TCGA-VV-A86M 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-VW-A7QS    TCGA-VW-A8FI    TCGA-W9-A837    TCGA-WH-A86K    TCGA-WY-A858 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-WY-A859    TCGA-WY-A85A    TCGA-WY-A85B    TCGA-WY-A85C    TCGA-WY-A85D 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-WY-A85E 
"QKI WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  QKI MUTATED        1      0      0      0
  QKI WILD-TYPE    126    119    106    156
D90V13, multiclass
[1] "Remove cluster labels:" "QKI MUTATED"           
clus
  QKI MUTATED QKI WILD-TYPE 
            1           507 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5281    TCGA-DB-A4X9 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD    TCGA-DB-A4XE 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L    TCGA-DB-A64O 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S    TCGA-DB-A64U 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K    TCGA-DB-A75L 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141    TCGA-DH-5142 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B    TCGA-DH-A66D 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US    TCGA-DH-A7UT 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849    TCGA-DU-5851 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855    TCGA-DU-5870 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392    TCGA-DU-6393 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397    TCGA-DU-6399 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403    TCGA-DU-6404 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408    TCGA-DU-6410 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008    TCGA-DU-7009 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7010    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7014    TCGA-DU-7015 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7018    TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7292    TCGA-DU-7294 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7298    TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7304    TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-8162    TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8166 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-8167    TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A5TT    TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A6S3    TCGA-DU-A6S6    TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A76L    TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A7TA    TCGA-DU-A7TB    TCGA-DU-A7TC    TCGA-DU-A7TD    TCGA-DU-A7TG 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A7TI    TCGA-DU-A7TJ    TCGA-E1-5302    TCGA-E1-5303    TCGA-E1-5304 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-5305    TCGA-E1-5307    TCGA-E1-5311    TCGA-E1-5318    TCGA-E1-5319 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-5322    TCGA-E1-A7YD    TCGA-E1-A7YE    TCGA-E1-A7YH    TCGA-E1-A7YI 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YJ    TCGA-E1-A7YK    TCGA-E1-A7YL    TCGA-E1-A7YM    TCGA-E1-A7YN 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YO    TCGA-E1-A7YQ    TCGA-E1-A7YS    TCGA-E1-A7YU    TCGA-E1-A7YV 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YW    TCGA-E1-A7YY    TCGA-E1-A7Z2    TCGA-E1-A7Z3    TCGA-E1-A7Z4 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7Z6    TCGA-EZ-7264    TCGA-F6-A8O3    TCGA-F6-A8O4    TCGA-FG-5962 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-5963    TCGA-FG-5964    TCGA-FG-6688    TCGA-FG-6689    TCGA-FG-6690 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-6691    TCGA-FG-6692    TCGA-FG-7634    TCGA-FG-7636    TCGA-FG-7637 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-7638    TCGA-FG-7641    TCGA-FG-7643    TCGA-FG-8181    TCGA-FG-8182 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-8185    TCGA-FG-8186    TCGA-FG-8187    TCGA-FG-8188    TCGA-FG-8189 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-8191    TCGA-FG-A4MT    TCGA-FG-A4MU    TCGA-FG-A4MW    TCGA-FG-A4MX 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A4MY    TCGA-FG-A60J    TCGA-FG-A60K    TCGA-FG-A60L    TCGA-FG-A6IZ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A6J1    TCGA-FG-A6J3    TCGA-FG-A70Y    TCGA-FG-A70Z    TCGA-FG-A710 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A711    TCGA-FG-A713    TCGA-FG-A87N    TCGA-FG-A87Q    TCGA-FN-7833 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7467    TCGA-HT-7468    TCGA-HT-7469    TCGA-HT-7470    TCGA-HT-7471 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7472    TCGA-HT-7473    TCGA-HT-7474    TCGA-HT-7475    TCGA-HT-7476 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7477    TCGA-HT-7478    TCGA-HT-7479    TCGA-HT-7480    TCGA-HT-7481 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7482    TCGA-HT-7483    TCGA-HT-7485    TCGA-HT-7601    TCGA-HT-7602 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7603    TCGA-HT-7604    TCGA-HT-7605    TCGA-HT-7606    TCGA-HT-7607 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7608    TCGA-HT-7609    TCGA-HT-7610    TCGA-HT-7611    TCGA-HT-7616 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7620    TCGA-HT-7676    TCGA-HT-7677    TCGA-HT-7680    TCGA-HT-7681 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7684    TCGA-HT-7686    TCGA-HT-7687    TCGA-HT-7688    TCGA-HT-7689 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7690    TCGA-HT-7691    TCGA-HT-7692    TCGA-HT-7693    TCGA-HT-7694 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7695    TCGA-HT-7854    TCGA-HT-7855    TCGA-HT-7856    TCGA-HT-7857 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7858    TCGA-HT-7860    TCGA-HT-7873    TCGA-HT-7874    TCGA-HT-7875 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7877    TCGA-HT-7879    TCGA-HT-7880    TCGA-HT-7881    TCGA-HT-7882 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7884    TCGA-HT-7902    TCGA-HT-8010    TCGA-HT-8011    TCGA-HT-8012 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8013    TCGA-HT-8015    TCGA-HT-8018    TCGA-HT-8019    TCGA-HT-8104 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8105    TCGA-HT-8106    TCGA-HT-8107    TCGA-HT-8108    TCGA-HT-8109 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8110    TCGA-HT-8111    TCGA-HT-8113    TCGA-HT-8114    TCGA-HT-8558 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8563    TCGA-HT-8564    TCGA-HT-A4DS    TCGA-HT-A4DV    TCGA-HT-A5R5 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A5R7    TCGA-HT-A5R9    TCGA-HT-A5RA    TCGA-HT-A5RB    TCGA-HT-A5RC 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A614    TCGA-HT-A615    TCGA-HT-A616    TCGA-HT-A617    TCGA-HT-A618 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A619    TCGA-HT-A61A    TCGA-HT-A61B    TCGA-HT-A61C    TCGA-HT-A74H 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A74K    TCGA-HT-A74L    TCGA-HT-A74O    TCGA-HW-7486    TCGA-HW-7487 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HW-7489    TCGA-HW-7490    TCGA-HW-7491    TCGA-HW-7493    TCGA-HW-7495 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HW-8319    TCGA-HW-8320    TCGA-HW-8321    TCGA-HW-8322    TCGA-HW-A5KJ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HW-A5KK    TCGA-HW-A5KL    TCGA-HW-A5KM    TCGA-IK-7675    TCGA-IK-8125 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-KT-A74X    TCGA-KT-A7W1    TCGA-P5-A5ET    TCGA-P5-A5EU    TCGA-P5-A5EV 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A5EW    TCGA-P5-A5EX    TCGA-P5-A5EY    TCGA-P5-A5EZ    TCGA-P5-A5F0 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A5F1    TCGA-P5-A5F2    TCGA-P5-A5F4    TCGA-P5-A72U    TCGA-P5-A72W 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A72X    TCGA-P5-A72Z    TCGA-P5-A730    TCGA-P5-A731    TCGA-P5-A733 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A735    TCGA-P5-A737    TCGA-P5-A77W    TCGA-P5-A77X    TCGA-P5-A780 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A781    TCGA-QH-A65R    TCGA-QH-A65S    TCGA-QH-A65V    TCGA-QH-A65X 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A65Z    TCGA-QH-A6CS    TCGA-QH-A6CU    TCGA-QH-A6CV    TCGA-QH-A6CX 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A6CY    TCGA-QH-A6CZ    TCGA-QH-A6X3    TCGA-QH-A6X4    TCGA-QH-A6X5 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A6X8    TCGA-QH-A6X9    TCGA-QH-A6XA    TCGA-QH-A6XC    TCGA-QH-A86X 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A870    TCGA-R8-A6MK    TCGA-R8-A6ML    TCGA-R8-A6MO    TCGA-R8-A6YH 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-R8-A73M    TCGA-RY-A83X    TCGA-RY-A83Y    TCGA-RY-A83Z    TCGA-RY-A840 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-RY-A843    TCGA-RY-A845    TCGA-RY-A847    TCGA-S9-A6TS    TCGA-S9-A6TU 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6TV    TCGA-S9-A6TW    TCGA-S9-A6TX    TCGA-S9-A6TY    TCGA-S9-A6TZ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6U0    TCGA-S9-A6U1    TCGA-S9-A6U2    TCGA-S9-A6U5    TCGA-S9-A6U6 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6U8    TCGA-S9-A6UA    TCGA-S9-A6UB    TCGA-S9-A6WD    TCGA-S9-A6WE 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6WG    TCGA-S9-A6WH    TCGA-S9-A6WI    TCGA-S9-A6WL    TCGA-S9-A6WM 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6WN    TCGA-S9-A6WO    TCGA-S9-A6WP    TCGA-S9-A6WQ    TCGA-S9-A7IQ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7IS    TCGA-S9-A7IX    TCGA-S9-A7IY    TCGA-S9-A7IZ    TCGA-S9-A7J0 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7J1    TCGA-S9-A7J2    TCGA-S9-A7J3    TCGA-S9-A7QW    TCGA-S9-A7QX 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7QY    TCGA-S9-A7QZ    TCGA-S9-A7R1    TCGA-S9-A7R2    TCGA-S9-A7R3 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7R4    TCGA-S9-A7R7    TCGA-S9-A7R8    TCGA-S9-A89V    TCGA-S9-A89Z 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A7C3    TCGA-TM-A7C4    TCGA-TM-A7C5    TCGA-TM-A7CA    TCGA-TM-A7CF 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A84B    TCGA-TM-A84C    TCGA-TM-A84F    TCGA-TM-A84G    TCGA-TM-A84H 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A84I    TCGA-TM-A84J    TCGA-TM-A84L    TCGA-TM-A84M    TCGA-TM-A84O 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A84Q    TCGA-TM-A84R    TCGA-TM-A84S    TCGA-TM-A84T    TCGA-TQ-A7RF 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RG    TCGA-TQ-A7RH    TCGA-TQ-A7RI    TCGA-TQ-A7RJ    TCGA-TQ-A7RK 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RM    TCGA-TQ-A7RN    TCGA-TQ-A7RO    TCGA-TQ-A7RP    TCGA-TQ-A7RQ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RR    TCGA-TQ-A7RS    TCGA-TQ-A7RU    TCGA-TQ-A7RV    TCGA-TQ-A7RW 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A8XE    TCGA-VM-A8C8    TCGA-VM-A8C9    TCGA-VM-A8CA    TCGA-VM-A8CB 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-VM-A8CD    TCGA-VM-A8CE    TCGA-VM-A8CF    TCGA-VM-A8CH    TCGA-VV-A829 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-VV-A86M    TCGA-VW-A7QS    TCGA-VW-A8FI    TCGA-W9-A837    TCGA-WH-A86K 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-WY-A858    TCGA-WY-A859    TCGA-WY-A85A    TCGA-WY-A85B    TCGA-WY-A85C 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-WY-A85D    TCGA-WY-A85E 
"QKI WILD-TYPE" "QKI WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  QKI MUTATED        0      0      0      0      0      1
  QKI WILD-TYPE     99     77    120     57     63     91
D90V14, multiclass
[1] "Remove cluster labels:" "QKI MUTATED"           
clus
  QKI MUTATED QKI WILD-TYPE 
            1           507 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5281    TCGA-DB-A4X9 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD    TCGA-DB-A4XE 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L    TCGA-DB-A64O 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S    TCGA-DB-A64U 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K    TCGA-DB-A75L 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141    TCGA-DH-5142 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B    TCGA-DH-A66D 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US    TCGA-DH-A7UT 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849    TCGA-DU-5851 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855    TCGA-DU-5870 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392    TCGA-DU-6393 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397    TCGA-DU-6399 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403    TCGA-DU-6404 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408    TCGA-DU-6410 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008    TCGA-DU-7009 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7010    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7014    TCGA-DU-7015 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7018    TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7292    TCGA-DU-7294 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7298    TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-7304    TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-8162    TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8166 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-8167    TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A5TT    TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A6S3    TCGA-DU-A6S6    TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A76L    TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A7TA    TCGA-DU-A7TB    TCGA-DU-A7TC    TCGA-DU-A7TD    TCGA-DU-A7TG 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-DU-A7TI    TCGA-DU-A7TJ    TCGA-E1-5302    TCGA-E1-5303    TCGA-E1-5304 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-5305    TCGA-E1-5307    TCGA-E1-5311    TCGA-E1-5318    TCGA-E1-5319 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-5322    TCGA-E1-A7YD    TCGA-E1-A7YE    TCGA-E1-A7YH    TCGA-E1-A7YI 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YJ    TCGA-E1-A7YK    TCGA-E1-A7YL    TCGA-E1-A7YM    TCGA-E1-A7YN 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YO    TCGA-E1-A7YQ    TCGA-E1-A7YS    TCGA-E1-A7YU    TCGA-E1-A7YV 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7YW    TCGA-E1-A7YY    TCGA-E1-A7Z2    TCGA-E1-A7Z3    TCGA-E1-A7Z4 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-E1-A7Z6    TCGA-EZ-7264    TCGA-F6-A8O3    TCGA-F6-A8O4    TCGA-FG-5962 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-5963    TCGA-FG-5964    TCGA-FG-6688    TCGA-FG-6689    TCGA-FG-6690 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-6691    TCGA-FG-6692    TCGA-FG-7634    TCGA-FG-7636    TCGA-FG-7637 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-7638    TCGA-FG-7641    TCGA-FG-7643    TCGA-FG-8181    TCGA-FG-8182 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-8185    TCGA-FG-8186    TCGA-FG-8187    TCGA-FG-8188    TCGA-FG-8189 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-8191    TCGA-FG-A4MT    TCGA-FG-A4MU    TCGA-FG-A4MW    TCGA-FG-A4MX 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A4MY    TCGA-FG-A60J    TCGA-FG-A60K    TCGA-FG-A60L    TCGA-FG-A6IZ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A6J1    TCGA-FG-A6J3    TCGA-FG-A70Y    TCGA-FG-A70Z    TCGA-FG-A710 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-FG-A711    TCGA-FG-A713    TCGA-FG-A87N    TCGA-FG-A87Q    TCGA-FN-7833 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7467    TCGA-HT-7468    TCGA-HT-7469    TCGA-HT-7470    TCGA-HT-7471 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7472    TCGA-HT-7473    TCGA-HT-7474    TCGA-HT-7475    TCGA-HT-7476 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7477    TCGA-HT-7478    TCGA-HT-7479    TCGA-HT-7480    TCGA-HT-7481 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7482    TCGA-HT-7483    TCGA-HT-7485    TCGA-HT-7601    TCGA-HT-7602 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7603    TCGA-HT-7604    TCGA-HT-7605    TCGA-HT-7606    TCGA-HT-7607 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7608    TCGA-HT-7609    TCGA-HT-7610    TCGA-HT-7611    TCGA-HT-7616 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7620    TCGA-HT-7676    TCGA-HT-7677    TCGA-HT-7680    TCGA-HT-7681 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7684    TCGA-HT-7686    TCGA-HT-7687    TCGA-HT-7688    TCGA-HT-7689 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7690    TCGA-HT-7691    TCGA-HT-7692    TCGA-HT-7693    TCGA-HT-7694 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7695    TCGA-HT-7854    TCGA-HT-7855    TCGA-HT-7856    TCGA-HT-7857 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7858    TCGA-HT-7860    TCGA-HT-7873    TCGA-HT-7874    TCGA-HT-7875 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7877    TCGA-HT-7879    TCGA-HT-7880    TCGA-HT-7881    TCGA-HT-7882 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-7884    TCGA-HT-7902    TCGA-HT-8010    TCGA-HT-8011    TCGA-HT-8012 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8013    TCGA-HT-8015    TCGA-HT-8018    TCGA-HT-8019    TCGA-HT-8104 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8105    TCGA-HT-8106    TCGA-HT-8107    TCGA-HT-8108    TCGA-HT-8109 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8110    TCGA-HT-8111    TCGA-HT-8113    TCGA-HT-8114    TCGA-HT-8558 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-8563    TCGA-HT-8564    TCGA-HT-A4DS    TCGA-HT-A4DV    TCGA-HT-A5R5 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A5R7    TCGA-HT-A5R9    TCGA-HT-A5RA    TCGA-HT-A5RB    TCGA-HT-A5RC 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A614    TCGA-HT-A615    TCGA-HT-A616    TCGA-HT-A617    TCGA-HT-A618 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A619    TCGA-HT-A61A    TCGA-HT-A61B    TCGA-HT-A61C    TCGA-HT-A74H 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HT-A74K    TCGA-HT-A74L    TCGA-HT-A74O    TCGA-HW-7486    TCGA-HW-7487 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HW-7489    TCGA-HW-7490    TCGA-HW-7491    TCGA-HW-7493    TCGA-HW-7495 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HW-8319    TCGA-HW-8320    TCGA-HW-8321    TCGA-HW-8322    TCGA-HW-A5KJ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-HW-A5KK    TCGA-HW-A5KL    TCGA-HW-A5KM    TCGA-IK-7675    TCGA-IK-8125 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-KT-A74X    TCGA-KT-A7W1    TCGA-P5-A5ET    TCGA-P5-A5EU    TCGA-P5-A5EV 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A5EW    TCGA-P5-A5EX    TCGA-P5-A5EY    TCGA-P5-A5EZ    TCGA-P5-A5F0 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A5F1    TCGA-P5-A5F2    TCGA-P5-A5F4    TCGA-P5-A72U    TCGA-P5-A72W 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A72X    TCGA-P5-A72Z    TCGA-P5-A730    TCGA-P5-A731    TCGA-P5-A733 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A735    TCGA-P5-A737    TCGA-P5-A77W    TCGA-P5-A77X    TCGA-P5-A780 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-P5-A781    TCGA-QH-A65R    TCGA-QH-A65S    TCGA-QH-A65V    TCGA-QH-A65X 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A65Z    TCGA-QH-A6CS    TCGA-QH-A6CU    TCGA-QH-A6CV    TCGA-QH-A6CX 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A6CY    TCGA-QH-A6CZ    TCGA-QH-A6X3    TCGA-QH-A6X4    TCGA-QH-A6X5 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A6X8    TCGA-QH-A6X9    TCGA-QH-A6XA    TCGA-QH-A6XC    TCGA-QH-A86X 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-QH-A870    TCGA-R8-A6MK    TCGA-R8-A6ML    TCGA-R8-A6MO    TCGA-R8-A6YH 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-R8-A73M    TCGA-RY-A83X    TCGA-RY-A83Y    TCGA-RY-A83Z    TCGA-RY-A840 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-RY-A843    TCGA-RY-A845    TCGA-RY-A847    TCGA-S9-A6TS    TCGA-S9-A6TU 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6TV    TCGA-S9-A6TW    TCGA-S9-A6TX    TCGA-S9-A6TY    TCGA-S9-A6TZ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6U0    TCGA-S9-A6U1    TCGA-S9-A6U2    TCGA-S9-A6U5    TCGA-S9-A6U6 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6U8    TCGA-S9-A6UA    TCGA-S9-A6UB    TCGA-S9-A6WD    TCGA-S9-A6WE 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6WG    TCGA-S9-A6WH    TCGA-S9-A6WI    TCGA-S9-A6WL    TCGA-S9-A6WM 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A6WN    TCGA-S9-A6WO    TCGA-S9-A6WP    TCGA-S9-A6WQ    TCGA-S9-A7IQ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7IS    TCGA-S9-A7IX    TCGA-S9-A7IY    TCGA-S9-A7IZ    TCGA-S9-A7J0 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7J1    TCGA-S9-A7J2    TCGA-S9-A7J3    TCGA-S9-A7QW    TCGA-S9-A7QX 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7QY    TCGA-S9-A7QZ    TCGA-S9-A7R1    TCGA-S9-A7R2    TCGA-S9-A7R3 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-S9-A7R4    TCGA-S9-A7R7    TCGA-S9-A7R8    TCGA-S9-A89V    TCGA-S9-A89Z 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A7C3    TCGA-TM-A7C4    TCGA-TM-A7C5    TCGA-TM-A7CA    TCGA-TM-A7CF 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A84B    TCGA-TM-A84C    TCGA-TM-A84F    TCGA-TM-A84G    TCGA-TM-A84H 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A84I    TCGA-TM-A84J    TCGA-TM-A84L    TCGA-TM-A84M    TCGA-TM-A84O 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TM-A84Q    TCGA-TM-A84R    TCGA-TM-A84S    TCGA-TM-A84T    TCGA-TQ-A7RF 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RG    TCGA-TQ-A7RH    TCGA-TQ-A7RI    TCGA-TQ-A7RJ    TCGA-TQ-A7RK 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RM    TCGA-TQ-A7RN    TCGA-TQ-A7RO    TCGA-TQ-A7RP    TCGA-TQ-A7RQ 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A7RR    TCGA-TQ-A7RS    TCGA-TQ-A7RU    TCGA-TQ-A7RV    TCGA-TQ-A7RW 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-TQ-A8XE    TCGA-VM-A8C8    TCGA-VM-A8C9    TCGA-VM-A8CA    TCGA-VM-A8CB 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-VM-A8CD    TCGA-VM-A8CE    TCGA-VM-A8CF    TCGA-VM-A8CH    TCGA-VV-A829 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-VV-A86M    TCGA-VW-A7QS    TCGA-VW-A8FI    TCGA-W9-A837    TCGA-WH-A86K 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-WY-A858    TCGA-WY-A859    TCGA-WY-A85A    TCGA-WY-A85B    TCGA-WY-A85C 
"QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" "QKI WILD-TYPE" 
   TCGA-WY-A85D    TCGA-WY-A85E 
"QKI WILD-TYPE" "QKI WILD-TYPE" 

Clustering(91) Variable = AOX1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AOX1 MUTATED        0      1      1      2
  AOX1 WILD-TYPE     78     40     63     55
D91V1, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            0             78
  CLUS_2            1             40
  CLUS_3            1             63
  CLUS_4            2             55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AOX1 MUTATED        0      2      0      2
  AOX1 WILD-TYPE     63     48     48     77
D91V2, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            0             63
  CLUS_2            2             48
  CLUS_3            0             48
  CLUS_4            2             77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AOX1 MUTATED        1      2      1      0
  AOX1 WILD-TYPE     69     96     43     63
D91V3, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            1             69
  CLUS_2            2             96
  CLUS_3            1             43
  CLUS_4            0             63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AOX1 MUTATED        4      0      0
  AOX1 WILD-TYPE    134     61     76
D91V4, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            4            134
  CLUS_2            0             61
  CLUS_3            0             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AOX1 MUTATED        6      2      0
  AOX1 WILD-TYPE    286    430     62
D91V5, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            6            286
  CLUS_2            2            430
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AOX1 MUTATED        2      2      0      0
  AOX1 WILD-TYPE    151    221     88    161
D91V6, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            2            151
  CLUS_2            2            221
  CLUS_3            0             88
  CLUS_4            0            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AOX1 MUTATED        1      1      2      2
  AOX1 WILD-TYPE    184    154    136     93
D91V7, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            1            184
  CLUS_2            1            154
  CLUS_3            2            136
  CLUS_4            2             93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AOX1 MUTATED        2      3      1
  AOX1 WILD-TYPE    203    217    147
D91V8, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            2            203
  CLUS_2            3            217
  CLUS_3            1            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AOX1 MUTATED        7      1      0
  AOX1 WILD-TYPE    231    190    228
D91V9, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            7            231
  CLUS_2            1            190
  CLUS_3            0            228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AOX1 MUTATED        5      2      1
  AOX1 WILD-TYPE    191    189    269
D91V10, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            5            191
  CLUS_2            2            189
  CLUS_3            1            269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AOX1 MUTATED        1      3      0      0
  AOX1 WILD-TYPE    139    104     83    182
D91V11, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            1            139
  CLUS_2            3            104
  CLUS_3            0             83
  CLUS_4            0            182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AOX1 MUTATED        1      0      3
  AOX1 WILD-TYPE    222    186    100
D91V12, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            1            222
  CLUS_2            0            186
  CLUS_3            3            100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AOX1 MUTATED        1      2      0      1
  AOX1 WILD-TYPE    126    117    106    155
D91V13, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            1            126
  CLUS_2            2            117
  CLUS_3            0            106
  CLUS_4            1            155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AOX1 MUTATED        0      1      0      0      1      2
  AOX1 WILD-TYPE     99     76    120     57     62     90
D91V14, multiclass
        clus
vv       AOX1 MUTATED AOX1 WILD-TYPE
  CLUS_1            0             99
  CLUS_2            1             76
  CLUS_3            0            120
  CLUS_4            0             57
  CLUS_5            1             62
  CLUS_6            2             90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(92) Variable = KRAS MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRAS MUTATED        0      0      0      1
  KRAS WILD-TYPE     78     41     64     56
D92V1, multiclass
[1] "Remove cluster labels:" "KRAS MUTATED"          
clus
  KRAS MUTATED KRAS WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2562 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRAS MUTATED        0      0      0      1
  KRAS WILD-TYPE     63     50     48     78
D92V2, multiclass
[1] "Remove cluster labels:" "KRAS MUTATED"          
clus
  KRAS MUTATED KRAS WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2562 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRAS MUTATED        1      1      0      0
  KRAS WILD-TYPE     69     97     44     63
D92V3, multiclass
[1] "Remove cluster labels:" "KRAS MUTATED"          
clus
  KRAS MUTATED KRAS WILD-TYPE 
             2            273 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-74-6578     TCGA-74-6584     TCGA-76-4925     TCGA-76-4926 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6280     TCGA-76-6282 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-87-5896 
"KRAS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KRAS MUTATED        1      0      1
  KRAS WILD-TYPE    137     61     75
D92V4, multiclass
[1] "Remove cluster labels:" "KRAS MUTATED"          
clus
  KRAS MUTATED KRAS WILD-TYPE 
             2            273 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-74-6578     TCGA-74-6584     TCGA-76-4925     TCGA-76-4926 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6280     TCGA-76-6282 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-87-5896 
"KRAS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KRAS MUTATED        2      2      0
  KRAS WILD-TYPE    290    430     62
D92V5, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            2            290
  CLUS_2            2            430
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRAS MUTATED        1      1      0      1
  KRAS WILD-TYPE    152    222     88    160
D92V6, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            1            152
  CLUS_2            1            222
  CLUS_3            0             88
  CLUS_4            1            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRAS MUTATED        1      1      1      0
  KRAS WILD-TYPE    184    154    137     95
D92V7, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            1            184
  CLUS_2            1            154
  CLUS_3            1            137
  CLUS_4            0             95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KRAS MUTATED        2      0      1
  KRAS WILD-TYPE    203    220    147
D92V8, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            2            203
  CLUS_2            0            220
  CLUS_3            1            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KRAS MUTATED        1      1      1
  KRAS WILD-TYPE    237    190    227
D92V9, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            1            237
  CLUS_2            1            190
  CLUS_3            1            227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KRAS MUTATED        1      0      2
  KRAS WILD-TYPE    195    191    268
D92V10, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            1            195
  CLUS_2            0            191
  CLUS_3            2            268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRAS MUTATED        0      0      1      1
  KRAS WILD-TYPE    140    107     82    181
D92V11, multiclass
[1] "Remove cluster labels:" "KRAS MUTATED"          
clus
  KRAS MUTATED KRAS WILD-TYPE 
             2            510 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5397     TCGA-CS-6186     TCGA-CS-6188 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666     TCGA-CS-6667 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670     TCGA-DB-5270 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275     TCGA-DB-5276 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279     TCGA-DB-5280 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A7T8     TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A845 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU     TCGA-S9-A6TV 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY     TCGA-S9-A6TZ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2     TCGA-S9-A6U5 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9     TCGA-S9-A6UA 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KRAS MUTATED        1      1      0
  KRAS WILD-TYPE    222    185    103
D92V12, multiclass
[1] "Remove cluster labels:" "KRAS MUTATED"          
clus
  KRAS MUTATED KRAS WILD-TYPE 
             2            510 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5397     TCGA-CS-6186     TCGA-CS-6188 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666     TCGA-CS-6667 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670     TCGA-DB-5270 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275     TCGA-DB-5276 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279     TCGA-DB-5280 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A7T8     TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A845 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU     TCGA-S9-A6TV 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY     TCGA-S9-A6TZ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2     TCGA-S9-A6U5 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9     TCGA-S9-A6UA 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRAS MUTATED        0      0      1      1
  KRAS WILD-TYPE    127    119    105    155
D92V13, multiclass
[1] "Remove cluster labels:" "KRAS MUTATED"          
clus
  KRAS MUTATED KRAS WILD-TYPE 
             2            506 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5397     TCGA-CS-6186     TCGA-CS-6188 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666     TCGA-CS-6667 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670     TCGA-DB-5270 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275     TCGA-DB-5276 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279     TCGA-DB-5281 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB     TCGA-DB-A4XC 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF     TCGA-DB-A4XG 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O     TCGA-DB-A64P 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S     TCGA-DB-A64U 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X     TCGA-DB-A75K 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393     TCGA-DU-6394 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6UA 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  KRAS MUTATED        0      0      0      1      0      1
  KRAS WILD-TYPE     99     77    120     56     63     91
D92V14, multiclass
[1] "Remove cluster labels:" "KRAS MUTATED"          
clus
  KRAS MUTATED KRAS WILD-TYPE 
             2            506 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5397     TCGA-CS-6186     TCGA-CS-6188 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666     TCGA-CS-6667 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670     TCGA-DB-5270 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275     TCGA-DB-5276 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279     TCGA-DB-5281 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB     TCGA-DB-A4XC 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF     TCGA-DB-A4XG 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O     TCGA-DB-A64P 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S     TCGA-DB-A64U 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X     TCGA-DB-A75K 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393     TCGA-DU-6394 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6UA 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" "KRAS WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"KRAS WILD-TYPE" "KRAS WILD-TYPE" 

Clustering(93) Variable = TYRP1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TYRP1 MUTATED        0      0      1      1
  TYRP1 WILD-TYPE     78     41     63     56
D93V1, multiclass
[1] "Remove cluster labels:" "TYRP1 MUTATED"         
clus
  TYRP1 MUTATED TYRP1 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-15-0742      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1838 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2527      TCGA-27-2528 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2501      TCGA-28-2502 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-2509      TCGA-28-2510      TCGA-28-2513      TCGA-28-2514 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5204      TCGA-28-5207      TCGA-28-5208      TCGA-28-5209 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TYRP1 MUTATED        0      2      0      0
  TYRP1 WILD-TYPE     63     48     48     79
D93V2, multiclass
[1] "Remove cluster labels:" "TYRP1 MUTATED"         
clus
  TYRP1 MUTATED TYRP1 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-15-0742      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1838 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2527      TCGA-27-2528 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2501      TCGA-28-2502 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-2509      TCGA-28-2510      TCGA-28-2513      TCGA-28-2514 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5204      TCGA-28-5207      TCGA-28-5208      TCGA-28-5209 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TYRP1 MUTATED        0      1      1      0
  TYRP1 WILD-TYPE     70     97     43     63
D93V3, multiclass
[1] "Remove cluster labels:" "TYRP1 MUTATED"         
clus
  TYRP1 MUTATED TYRP1 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1838      TCGA-27-2518      TCGA-27-2519 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-2521      TCGA-27-2523      TCGA-27-2524      TCGA-27-2526 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-2527      TCGA-27-2528      TCGA-28-1747      TCGA-28-1753 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5211      TCGA-28-5213      TCGA-28-5214 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5219 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5220      TCGA-28-6450      TCGA-32-1970      TCGA-32-1977 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-87-5896 
"TYRP1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TYRP1 MUTATED        2      0      0
  TYRP1 WILD-TYPE    136     61     76
D93V4, multiclass
[1] "Remove cluster labels:" "TYRP1 MUTATED"         
clus
  TYRP1 MUTATED TYRP1 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1838      TCGA-27-2518      TCGA-27-2519 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-2521      TCGA-27-2523      TCGA-27-2524      TCGA-27-2526 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-27-2527      TCGA-27-2528      TCGA-28-1747      TCGA-28-1753 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5211      TCGA-28-5213      TCGA-28-5214 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5219 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-28-5220      TCGA-28-6450      TCGA-32-1970      TCGA-32-1977 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3392 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-41-3393      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" "TYRP1 WILD-TYPE" 
     TCGA-87-5896 
"TYRP1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TYRP1 MUTATED        3      3      0
  TYRP1 WILD-TYPE    289    429     62
D93V5, multiclass
        clus
vv       TYRP1 MUTATED TYRP1 WILD-TYPE
  CLUS_1             3             289
  CLUS_2             3             429
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TYRP1 MUTATED        2      2      0      1
  TYRP1 WILD-TYPE    151    221     88    160
D93V6, multiclass
        clus
vv       TYRP1 MUTATED TYRP1 WILD-TYPE
  CLUS_1             2             151
  CLUS_2             2             221
  CLUS_3             0              88
  CLUS_4             1             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TYRP1 MUTATED        1      1      1      0
  TYRP1 WILD-TYPE    184    154    137     95
D93V7, multiclass
        clus
vv       TYRP1 MUTATED TYRP1 WILD-TYPE
  CLUS_1             1             184
  CLUS_2             1             154
  CLUS_3             1             137
  CLUS_4             0              95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TYRP1 MUTATED        2      0      1
  TYRP1 WILD-TYPE    203    220    147
D93V8, multiclass
        clus
vv       TYRP1 MUTATED TYRP1 WILD-TYPE
  CLUS_1             2             203
  CLUS_2             0             220
  CLUS_3             1             147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TYRP1 MUTATED        4      1      1
  TYRP1 WILD-TYPE    234    190    227
D93V9, multiclass
        clus
vv       TYRP1 MUTATED TYRP1 WILD-TYPE
  CLUS_1             4             234
  CLUS_2             1             190
  CLUS_3             1             227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TYRP1 MUTATED        2      3      1
  TYRP1 WILD-TYPE    194    188    269
D93V10, multiclass
        clus
vv       TYRP1 MUTATED TYRP1 WILD-TYPE
  CLUS_1             2             194
  CLUS_2             3             188
  CLUS_3             1             269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TYRP1 MUTATED        0      2      0      2
  TYRP1 WILD-TYPE    140    105     83    180
D93V11, multiclass
        clus
vv       TYRP1 MUTATED TYRP1 WILD-TYPE
  CLUS_1             0             140
  CLUS_2             2             105
  CLUS_3             0              83
  CLUS_4             2             180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TYRP1 MUTATED        1      1      2
  TYRP1 WILD-TYPE    222    185    101
D93V12, multiclass
        clus
vv       TYRP1 MUTATED TYRP1 WILD-TYPE
  CLUS_1             1             222
  CLUS_2             1             185
  CLUS_3             2             101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TYRP1 MUTATED        1      1      0      2
  TYRP1 WILD-TYPE    126    118    106    154
D93V13, multiclass
        clus
vv       TYRP1 MUTATED TYRP1 WILD-TYPE
  CLUS_1             1             126
  CLUS_2             1             118
  CLUS_3             0             106
  CLUS_4             2             154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  TYRP1 MUTATED        0      0      1      0      1      2
  TYRP1 WILD-TYPE     99     77    119     57     62     90
D93V14, multiclass
        clus
vv       TYRP1 MUTATED TYRP1 WILD-TYPE
  CLUS_1             0              99
  CLUS_2             0              77
  CLUS_3             1             119
  CLUS_4             0              57
  CLUS_5             1              62
  CLUS_6             2              90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(94) Variable = EMG1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EMG1 MUTATED        0      0      0      0
  EMG1 WILD-TYPE     78     41     64     57
D94V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EMG1 MUTATED        0      0      0      0
  EMG1 WILD-TYPE     63     50     48     79
D94V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EMG1 MUTATED        0      0      0      0
  EMG1 WILD-TYPE     70     98     44     63
D94V3, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EMG1 MUTATED        0      0      0
  EMG1 WILD-TYPE    138     61     76
D94V4, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EMG1 MUTATED        1      4      0
  EMG1 WILD-TYPE    291    428     62
D94V5, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            1            291
  CLUS_2            4            428
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EMG1 MUTATED        0      2      0      3
  EMG1 WILD-TYPE    153    221     88    158
D94V6, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            0            153
  CLUS_2            2            221
  CLUS_3            0             88
  CLUS_4            3            158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EMG1 MUTATED        2      3      0      0
  EMG1 WILD-TYPE    183    152    138     95
D94V7, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            2            183
  CLUS_2            3            152
  CLUS_3            0            138
  CLUS_4            0             95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EMG1 MUTATED        3      1      1
  EMG1 WILD-TYPE    202    219    147
D94V8, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            3            202
  CLUS_2            1            219
  CLUS_3            1            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EMG1 MUTATED        0      1      4
  EMG1 WILD-TYPE    238    190    224
D94V9, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            0            238
  CLUS_2            1            190
  CLUS_3            4            224
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EMG1 MUTATED        0      1      4
  EMG1 WILD-TYPE    196    190    266
D94V10, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            0            196
  CLUS_2            1            190
  CLUS_3            4            266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EMG1 MUTATED        1      0      2      2
  EMG1 WILD-TYPE    139    107     81    180
D94V11, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            1            139
  CLUS_2            0            107
  CLUS_3            2             81
  CLUS_4            2            180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EMG1 MUTATED        4      1      0
  EMG1 WILD-TYPE    219    185    103
D94V12, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            4            219
  CLUS_2            1            185
  CLUS_3            0            103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EMG1 MUTATED        1      0      3      1
  EMG1 WILD-TYPE    126    119    103    155
D94V13, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            1            126
  CLUS_2            0            119
  CLUS_3            3            103
  CLUS_4            1            155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  EMG1 MUTATED        1      1      0      2      0      1
  EMG1 WILD-TYPE     98     76    120     55     63     91
D94V14, multiclass
        clus
vv       EMG1 MUTATED EMG1 WILD-TYPE
  CLUS_1            1             98
  CLUS_2            1             76
  CLUS_3            0            120
  CLUS_4            2             55
  CLUS_5            0             63
  CLUS_6            1             91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(95) Variable = HEATR3 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HEATR3 MUTATED        0      1      0      1
  HEATR3 WILD-TYPE     78     40     64     56
D95V1, multiclass
[1] "Remove cluster labels:" "HEATR3 MUTATED"        
clus
  HEATR3 MUTATED HEATR3 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4935       TCGA-76-6191 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HEATR3 MUTATED        0      1      0      1
  HEATR3 WILD-TYPE     63     49     48     78
D95V2, multiclass
[1] "Remove cluster labels:" "HEATR3 MUTATED"        
clus
  HEATR3 MUTATED HEATR3 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4935       TCGA-76-6191 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HEATR3 MUTATED        0      1      1      0
  HEATR3 WILD-TYPE     70     97     43     63
D95V3, multiclass
[1] "Remove cluster labels:" "HEATR3 MUTATED"        
clus
  HEATR3 MUTATED HEATR3 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4935       TCGA-76-6191 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-87-5896 
"HEATR3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HEATR3 MUTATED        1      0      1
  HEATR3 WILD-TYPE    137     61     75
D95V4, multiclass
[1] "Remove cluster labels:" "HEATR3 MUTATED"        
clus
  HEATR3 MUTATED HEATR3 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4935       TCGA-76-6191 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-87-5896 
"HEATR3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HEATR3 MUTATED        2      1      1
  HEATR3 WILD-TYPE    290    431     61
D95V5, multiclass
        clus
vv       HEATR3 MUTATED HEATR3 WILD-TYPE
  CLUS_1              2              290
  CLUS_2              1              431
  CLUS_3              1               61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HEATR3 MUTATED        2      0      0      1
  HEATR3 WILD-TYPE    151    223     88    160
D95V6, multiclass
        clus
vv       HEATR3 MUTATED HEATR3 WILD-TYPE
  CLUS_1              2              151
  CLUS_2              0              223
  CLUS_3              0               88
  CLUS_4              1              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HEATR3 MUTATED        2      0      1      0
  HEATR3 WILD-TYPE    183    155    137     95
D95V7, multiclass
        clus
vv       HEATR3 MUTATED HEATR3 WILD-TYPE
  CLUS_1              2              183
  CLUS_2              0              155
  CLUS_3              1              137
  CLUS_4              0               95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HEATR3 MUTATED        2      1      0
  HEATR3 WILD-TYPE    203    219    148
D95V8, multiclass
        clus
vv       HEATR3 MUTATED HEATR3 WILD-TYPE
  CLUS_1              2              203
  CLUS_2              1              219
  CLUS_3              0              148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HEATR3 MUTATED        2      0      1
  HEATR3 WILD-TYPE    236    191    227
D95V9, multiclass
        clus
vv       HEATR3 MUTATED HEATR3 WILD-TYPE
  CLUS_1              2              236
  CLUS_2              0              191
  CLUS_3              1              227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HEATR3 MUTATED        1      1      1
  HEATR3 WILD-TYPE    195    190    269
D95V10, multiclass
        clus
vv       HEATR3 MUTATED HEATR3 WILD-TYPE
  CLUS_1              1              195
  CLUS_2              1              190
  CLUS_3              1              269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HEATR3 MUTATED        0      1      1      0
  HEATR3 WILD-TYPE    140    106     82    182
D95V11, multiclass
[1] "Remove cluster labels:" "HEATR3 MUTATED"        
clus
  HEATR3 MUTATED HEATR3 WILD-TYPE 
               2              510 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6394 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7014       TCGA-DU-7015 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TI       TCGA-DU-A7TJ       TCGA-E1-5302 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A74H       TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-7491       TCGA-HW-7493       TCGA-HW-7495       TCGA-HW-8319 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW       TCGA-P5-A5EX 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6       TCGA-P5-A72U 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A736 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X       TCGA-P5-A780 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S       TCGA-QH-A65V 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS       TCGA-QH-A6CU 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6CV       TCGA-QH-A6CX       TCGA-QH-A6CY       TCGA-QH-A6CZ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X       TCGA-RY-A83Y 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843       TCGA-RY-A845 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU       TCGA-S9-A6TV 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6TZ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2       TCGA-S9-A6U5 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6U9       TCGA-S9-A6UA 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE       TCGA-S9-A6WG 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL       TCGA-S9-A6WM 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP       TCGA-S9-A6WQ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX       TCGA-S9-A7IY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1       TCGA-S9-A7J2 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX       TCGA-S9-A7QY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2       TCGA-S9-A7R3 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8       TCGA-S9-A89V 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4       TCGA-TM-A7C5 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B       TCGA-TM-A84C 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H       TCGA-TM-A84I 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M       TCGA-TM-A84O 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S       TCGA-TM-A84T 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH       TCGA-TQ-A7RI 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM       TCGA-TQ-A7RN 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ       TCGA-TQ-A7RR 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV       TCGA-TQ-A7RW 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9       TCGA-VM-A8CA 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE       TCGA-VM-A8CF 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M       TCGA-VW-A7QS 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K       TCGA-WY-A858 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B       TCGA-WY-A85C 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-WY-A85D       TCGA-WY-A85E 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HEATR3 MUTATED        0      1      1
  HEATR3 WILD-TYPE    223    185    102
D95V12, multiclass
[1] "Remove cluster labels:" "HEATR3 MUTATED"        
clus
  HEATR3 MUTATED HEATR3 WILD-TYPE 
               2              510 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6394 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7014       TCGA-DU-7015 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TI       TCGA-DU-A7TJ       TCGA-E1-5302 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A74H       TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-7491       TCGA-HW-7493       TCGA-HW-7495       TCGA-HW-8319 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW       TCGA-P5-A5EX 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6       TCGA-P5-A72U 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A736 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X       TCGA-P5-A780 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S       TCGA-QH-A65V 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS       TCGA-QH-A6CU 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6CV       TCGA-QH-A6CX       TCGA-QH-A6CY       TCGA-QH-A6CZ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X       TCGA-RY-A83Y 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843       TCGA-RY-A845 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU       TCGA-S9-A6TV 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6TZ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2       TCGA-S9-A6U5 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6U9       TCGA-S9-A6UA 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE       TCGA-S9-A6WG 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL       TCGA-S9-A6WM 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP       TCGA-S9-A6WQ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX       TCGA-S9-A7IY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1       TCGA-S9-A7J2 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX       TCGA-S9-A7QY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2       TCGA-S9-A7R3 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8       TCGA-S9-A89V 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4       TCGA-TM-A7C5 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B       TCGA-TM-A84C 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H       TCGA-TM-A84I 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M       TCGA-TM-A84O 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S       TCGA-TM-A84T 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH       TCGA-TQ-A7RI 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM       TCGA-TQ-A7RN 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ       TCGA-TQ-A7RR 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV       TCGA-TQ-A7RW 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9       TCGA-VM-A8CA 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE       TCGA-VM-A8CF 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M       TCGA-VW-A7QS 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K       TCGA-WY-A858 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B       TCGA-WY-A85C 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-WY-A85D       TCGA-WY-A85E 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HEATR3 MUTATED        0      0      1      1
  HEATR3 WILD-TYPE    127    119    105    155
D95V13, multiclass
[1] "Remove cluster labels:" "HEATR3 MUTATED"        
clus
  HEATR3 MUTATED HEATR3 WILD-TYPE 
               2              506 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6394       TCGA-DU-6395 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7012 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7013       TCGA-DU-7014       TCGA-DU-7015       TCGA-DU-7018 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A7TI       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-7493       TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5EV       TCGA-P5-A5EW       TCGA-P5-A5EX       TCGA-P5-A5EY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1       TCGA-P5-A5F2 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5F4       TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A735       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX       TCGA-QH-A6CY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6UA 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE       TCGA-S9-A6WG 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL       TCGA-S9-A6WM 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP       TCGA-S9-A6WQ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX       TCGA-S9-A7IY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1       TCGA-S9-A7J2 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX       TCGA-S9-A7QY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2       TCGA-S9-A7R3 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8       TCGA-S9-A89V 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4       TCGA-TM-A7C5 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B       TCGA-TM-A84C 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H       TCGA-TM-A84I 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M       TCGA-TM-A84O 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S       TCGA-TM-A84T 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH       TCGA-TQ-A7RI 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM       TCGA-TQ-A7RN 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ       TCGA-TQ-A7RR 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV       TCGA-TQ-A7RW 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9       TCGA-VM-A8CA 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE       TCGA-VM-A8CF 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M       TCGA-VW-A7QS 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K       TCGA-WY-A858 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B       TCGA-WY-A85C 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-WY-A85D       TCGA-WY-A85E 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  HEATR3 MUTATED        0      0      0      0      0      2
  HEATR3 WILD-TYPE     99     77    120     57     63     90
D95V14, multiclass
[1] "Remove cluster labels:" "HEATR3 MUTATED"        
clus
  HEATR3 MUTATED HEATR3 WILD-TYPE 
               2              506 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6394       TCGA-DU-6395 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7012 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7013       TCGA-DU-7014       TCGA-DU-7015       TCGA-DU-7018 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-DU-A7TI       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-7493       TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5EV       TCGA-P5-A5EW       TCGA-P5-A5EX       TCGA-P5-A5EY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1       TCGA-P5-A5F2 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A5F4       TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A735       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX       TCGA-QH-A6CY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6UA 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE       TCGA-S9-A6WG 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL       TCGA-S9-A6WM 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP       TCGA-S9-A6WQ 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX       TCGA-S9-A7IY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1       TCGA-S9-A7J2 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX       TCGA-S9-A7QY 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2       TCGA-S9-A7R3 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8       TCGA-S9-A89V 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4       TCGA-TM-A7C5 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B       TCGA-TM-A84C 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H       TCGA-TM-A84I 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M       TCGA-TM-A84O 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S       TCGA-TM-A84T 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH       TCGA-TQ-A7RI 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM       TCGA-TQ-A7RN 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ       TCGA-TQ-A7RR 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV       TCGA-TQ-A7RW 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9       TCGA-VM-A8CA 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE       TCGA-VM-A8CF 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M       TCGA-VW-A7QS 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K       TCGA-WY-A858 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B       TCGA-WY-A85C 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 
      TCGA-WY-A85D       TCGA-WY-A85E 
"HEATR3 WILD-TYPE" "HEATR3 WILD-TYPE" 

Clustering(96) Variable = CDKN2A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDKN2A MUTATED        0      0      1      1
  CDKN2A WILD-TYPE     78     41     63     56
D96V1, multiclass
[1] "Remove cluster labels:" "CDKN2A MUTATED"        
clus
  CDKN2A MUTATED CDKN2A WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-4208       TCGA-32-4209 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDKN2A MUTATED        1      0      0      1
  CDKN2A WILD-TYPE     62     50     48     78
D96V2, multiclass
[1] "Remove cluster labels:" "CDKN2A MUTATED"        
clus
  CDKN2A MUTATED CDKN2A WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-4208       TCGA-32-4209 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDKN2A MUTATED        1      1      0      0
  CDKN2A WILD-TYPE     69     97     44     63
D96V3, multiclass
[1] "Remove cluster labels:" "CDKN2A MUTATED"        
clus
  CDKN2A MUTATED CDKN2A WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-87-5896 
"CDKN2A WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CDKN2A MUTATED        0      1      1
  CDKN2A WILD-TYPE    138     60     75
D96V4, multiclass
[1] "Remove cluster labels:" "CDKN2A MUTATED"        
clus
  CDKN2A MUTATED CDKN2A WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" "CDKN2A WILD-TYPE" 
      TCGA-87-5896 
"CDKN2A WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CDKN2A MUTATED        3      3      0
  CDKN2A WILD-TYPE    289    429     62
D96V5, multiclass
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              3              289
  CLUS_2              3              429
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDKN2A MUTATED        1      2      0      1
  CDKN2A WILD-TYPE    152    221     88    160
D96V6, multiclass
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              1              152
  CLUS_2              2              221
  CLUS_3              0               88
  CLUS_4              1              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDKN2A MUTATED        2      0      1      1
  CDKN2A WILD-TYPE    183    155    137     94
D96V7, multiclass
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              2              183
  CLUS_2              0              155
  CLUS_3              1              137
  CLUS_4              1               94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CDKN2A MUTATED        2      2      0
  CDKN2A WILD-TYPE    203    218    148
D96V8, multiclass
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              2              203
  CLUS_2              2              218
  CLUS_3              0              148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CDKN2A MUTATED        3      0      3
  CDKN2A WILD-TYPE    235    191    225
D96V9, multiclass
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              3              235
  CLUS_2              0              191
  CLUS_3              3              225
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CDKN2A MUTATED        2      3      1
  CDKN2A WILD-TYPE    194    188    269
D96V10, multiclass
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              2              194
  CLUS_2              3              188
  CLUS_3              1              269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDKN2A MUTATED        0      3      1      0
  CDKN2A WILD-TYPE    140    104     82    182
D96V11, multiclass
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              0              140
  CLUS_2              3              104
  CLUS_3              1               82
  CLUS_4              0              182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CDKN2A MUTATED        3      0      1
  CDKN2A WILD-TYPE    220    186    102
D96V12, multiclass
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              3              220
  CLUS_2              0              186
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDKN2A MUTATED        0      1      2      1
  CDKN2A WILD-TYPE    127    118    104    155
D96V13, multiclass
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              0              127
  CLUS_2              1              118
  CLUS_3              2              104
  CLUS_4              1              155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  CDKN2A MUTATED        0      1      0      1      0      2
  CDKN2A WILD-TYPE     99     76    120     56     63     90
D96V14, multiclass
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              0               99
  CLUS_2              1               76
  CLUS_3              0              120
  CLUS_4              1               56
  CLUS_5              0               63
  CLUS_6              2               90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(97) Variable = SLC35A2 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC35A2 MUTATED        0      1      0      0
  SLC35A2 WILD-TYPE     78     40     64     57
D97V1, multiclass
[1] "Remove cluster labels:" "SLC35A2 MUTATED"       
clus
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6389 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6390        TCGA-06-6391        TCGA-08-0386        TCGA-12-0616 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-0618        TCGA-12-0619        TCGA-12-0688        TCGA-12-0692 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-0821        TCGA-12-1597        TCGA-12-3649        TCGA-12-3650 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-3652        TCGA-12-3653        TCGA-12-5295        TCGA-12-5299 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-5301        TCGA-14-0781        TCGA-14-0786        TCGA-14-0787 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0789        TCGA-14-0790        TCGA-14-0813        TCGA-14-0817 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1456        TCGA-14-1823        TCGA-14-1829 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5954 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1835        TCGA-27-1836        TCGA-27-1837 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1838        TCGA-27-2518        TCGA-27-2519        TCGA-27-2521 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2527 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-2528        TCGA-28-1747        TCGA-28-1753        TCGA-28-2501 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC35A2 MUTATED        0      1      0      0
  SLC35A2 WILD-TYPE     63     49     48     79
D97V2, multiclass
[1] "Remove cluster labels:" "SLC35A2 MUTATED"       
clus
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6389 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6390        TCGA-06-6391        TCGA-08-0386        TCGA-12-0616 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-0618        TCGA-12-0619        TCGA-12-0688        TCGA-12-0692 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-0821        TCGA-12-1597        TCGA-12-3649        TCGA-12-3650 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-3652        TCGA-12-3653        TCGA-12-5295        TCGA-12-5299 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-5301        TCGA-14-0781        TCGA-14-0786        TCGA-14-0787 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0789        TCGA-14-0790        TCGA-14-0813        TCGA-14-0817 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1456        TCGA-14-1823        TCGA-14-1829 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5954 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1835        TCGA-27-1836        TCGA-27-1837 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1838        TCGA-27-2518        TCGA-27-2519        TCGA-27-2521 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2527 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-2528        TCGA-28-1747        TCGA-28-1753        TCGA-28-2501 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC35A2 MUTATED        0      1      0      0
  SLC35A2 WILD-TYPE     70     97     44     63
D97V3, multiclass
[1] "Remove cluster labels:" "SLC35A2 MUTATED"       
clus
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-1806        TCGA-06-2557        TCGA-06-2558        TCGA-06-2559 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2561        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2569        TCGA-06-2570 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5414        TCGA-06-5415        TCGA-06-5417 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5418        TCGA-06-5856        TCGA-06-5858        TCGA-06-5859 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6388        TCGA-06-6389        TCGA-06-6390        TCGA-06-6391 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6693        TCGA-06-6694        TCGA-06-6695        TCGA-06-6697 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6698        TCGA-06-6699        TCGA-06-6700        TCGA-06-6701 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-08-0386        TCGA-12-0616        TCGA-12-0618        TCGA-12-0619 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-0688        TCGA-12-0692        TCGA-12-0821        TCGA-12-1597 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-3649        TCGA-12-3650        TCGA-12-3652        TCGA-12-3653 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-5295        TCGA-12-5299        TCGA-12-5301        TCGA-14-0740 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0862 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1043        TCGA-14-1395        TCGA-14-1450 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1829        TCGA-14-2554 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-3476        TCGA-14-4157        TCGA-15-0742        TCGA-15-1444 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-16-0846        TCGA-16-0861        TCGA-16-1045        TCGA-16-1048 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-1390        TCGA-19-1790        TCGA-19-2619        TCGA-19-2620 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-2623        TCGA-19-2624        TCGA-19-2625        TCGA-19-2629 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-2631        TCGA-19-4068        TCGA-19-5947        TCGA-19-5950 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1830        TCGA-27-1831 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1832        TCGA-27-1833        TCGA-27-1834        TCGA-27-1835 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1836        TCGA-27-1837        TCGA-27-1838        TCGA-27-2518 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-2519        TCGA-27-2521        TCGA-27-2523        TCGA-27-2524 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-2526        TCGA-27-2527        TCGA-27-2528        TCGA-28-1747 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-1753        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5207 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5211        TCGA-28-5213 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5214        TCGA-28-5215        TCGA-28-5216        TCGA-28-5218 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5219        TCGA-28-5220        TCGA-28-6450        TCGA-32-1970 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-1977        TCGA-32-1979        TCGA-32-1980        TCGA-32-1982 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-1986        TCGA-32-1991        TCGA-32-2491        TCGA-32-2494 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-2495        TCGA-32-2615        TCGA-32-2632        TCGA-32-2634 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-2638        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC35A2 MUTATED        1      0      0
  SLC35A2 WILD-TYPE    137     61     76
D97V4, multiclass
[1] "Remove cluster labels:" "SLC35A2 MUTATED"       
clus
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-1806        TCGA-06-2557        TCGA-06-2558        TCGA-06-2559 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2561        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2569        TCGA-06-2570 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5414        TCGA-06-5415        TCGA-06-5417 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5418        TCGA-06-5856        TCGA-06-5858        TCGA-06-5859 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6388        TCGA-06-6389        TCGA-06-6390        TCGA-06-6391 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6693        TCGA-06-6694        TCGA-06-6695        TCGA-06-6697 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6698        TCGA-06-6699        TCGA-06-6700        TCGA-06-6701 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-08-0386        TCGA-12-0616        TCGA-12-0618        TCGA-12-0619 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-0688        TCGA-12-0692        TCGA-12-0821        TCGA-12-1597 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-3649        TCGA-12-3650        TCGA-12-3652        TCGA-12-3653 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-5295        TCGA-12-5299        TCGA-12-5301        TCGA-14-0740 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0862 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1043        TCGA-14-1395        TCGA-14-1450 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1829        TCGA-14-2554 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-3476        TCGA-14-4157        TCGA-15-0742        TCGA-15-1444 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-16-0846        TCGA-16-0861        TCGA-16-1045        TCGA-16-1048 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-1390        TCGA-19-1790        TCGA-19-2619        TCGA-19-2620 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-2623        TCGA-19-2624        TCGA-19-2625        TCGA-19-2629 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-2631        TCGA-19-4068        TCGA-19-5947        TCGA-19-5950 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1830        TCGA-27-1831 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1832        TCGA-27-1833        TCGA-27-1834        TCGA-27-1835 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1836        TCGA-27-1837        TCGA-27-1838        TCGA-27-2518 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-2519        TCGA-27-2521        TCGA-27-2523        TCGA-27-2524 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-2526        TCGA-27-2527        TCGA-27-2528        TCGA-28-1747 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-1753        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5207 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5211        TCGA-28-5213 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5214        TCGA-28-5215        TCGA-28-5216        TCGA-28-5218 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5219        TCGA-28-5220        TCGA-28-6450        TCGA-32-1970 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-1977        TCGA-32-1979        TCGA-32-1980        TCGA-32-1982 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-1986        TCGA-32-1991        TCGA-32-2491        TCGA-32-2494 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-2495        TCGA-32-2615        TCGA-32-2632        TCGA-32-2634 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-2638        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC35A2 MUTATED        1      2      0
  SLC35A2 WILD-TYPE    291    430     62
D97V5, multiclass
        clus
vv       SLC35A2 MUTATED SLC35A2 WILD-TYPE
  CLUS_1               1               291
  CLUS_2               2               430
  CLUS_3               0                62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC35A2 MUTATED        0      1      0      1
  SLC35A2 WILD-TYPE    153    222     88    160
D97V6, multiclass
[1] "Remove cluster labels:" "SLC35A2 MUTATED"       
clus
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                2               623 
       TCGA-06-0152        TCGA-06-0650        TCGA-06-1804        TCGA-06-1806 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5414        TCGA-06-5415        TCGA-06-5417 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5418        TCGA-06-5856        TCGA-06-5858        TCGA-06-5859 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6388        TCGA-06-6389        TCGA-06-6390        TCGA-06-6391 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6693        TCGA-06-6694        TCGA-06-6695        TCGA-06-6697 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6698        TCGA-06-6699        TCGA-06-6700        TCGA-06-6701 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-5295        TCGA-12-5299        TCGA-12-5301        TCGA-14-0740 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0862        TCGA-14-1043        TCGA-14-1395 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-1450        TCGA-15-1444        TCGA-19-5947        TCGA-19-5950 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-1442        TCGA-26-5132        TCGA-26-5133        TCGA-26-5134 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-5135        TCGA-26-5136        TCGA-26-5139        TCGA-26-6173 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-6174        TCGA-28-2501        TCGA-28-2510        TCGA-28-5204 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5207        TCGA-28-5208        TCGA-28-5209        TCGA-28-5211 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5213        TCGA-28-5214        TCGA-28-5215        TCGA-28-5216 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5218        TCGA-28-5219        TCGA-28-5220        TCGA-28-6450 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-1979        TCGA-32-1980        TCGA-32-5222        TCGA-41-5651 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-6646        TCGA-74-6573        TCGA-74-6575        TCGA-74-6577 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-74-6578        TCGA-74-6584        TCGA-76-4925        TCGA-76-4926 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-4932        TCGA-76-4934        TCGA-76-4935        TCGA-76-6191 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6192        TCGA-76-6193        TCGA-76-6280        TCGA-76-6282 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6283        TCGA-76-6285        TCGA-76-6286        TCGA-76-6656 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6657        TCGA-76-6660        TCGA-76-6661        TCGA-76-6662 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6663        TCGA-76-6664        TCGA-81-5910        TCGA-81-5911 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-87-5896        TCGA-CS-4938        TCGA-CS-4941        TCGA-CS-4942 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-4943        TCGA-CS-4944        TCGA-CS-5390        TCGA-CS-5393 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-5394        TCGA-CS-5395        TCGA-CS-5396        TCGA-CS-5397 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6186        TCGA-CS-6188        TCGA-CS-6290        TCGA-CS-6665 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6666        TCGA-CS-6667        TCGA-CS-6668        TCGA-CS-6669 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6670        TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5275        TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5279        TCGA-DB-5280        TCGA-DB-5281        TCGA-DB-A4X9 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XA        TCGA-DB-A4XB        TCGA-DB-A4XC        TCGA-DB-A4XD 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XE        TCGA-DB-A4XF        TCGA-DB-A4XG        TCGA-DB-A4XH 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64L        TCGA-DB-A64O        TCGA-DB-A64P        TCGA-DB-A64Q 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64S        TCGA-DB-A64U        TCGA-DB-A64V        TCGA-DB-A64W 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64X        TCGA-DB-A75K        TCGA-DB-A75L        TCGA-DB-A75M 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A75O        TCGA-DB-A75P        TCGA-DH-5140        TCGA-DH-5141 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-5142        TCGA-DH-5143        TCGA-DH-5144        TCGA-DH-A669 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A66B        TCGA-DH-A66D        TCGA-DH-A66F        TCGA-DH-A66G 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A7UR        TCGA-DH-A7US        TCGA-DH-A7UT        TCGA-DH-A7UU 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A7UV        TCGA-DU-5847        TCGA-DU-5849        TCGA-DU-5851 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5852        TCGA-DU-5853        TCGA-DU-5854        TCGA-DU-5855 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5870        TCGA-DU-5871        TCGA-DU-5872        TCGA-DU-5874 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6392        TCGA-DU-6393        TCGA-DU-6394        TCGA-DU-6395 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6396        TCGA-DU-6397        TCGA-DU-6399        TCGA-DU-6400 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6401        TCGA-DU-6402        TCGA-DU-6403        TCGA-DU-6404 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6405        TCGA-DU-6406        TCGA-DU-6407        TCGA-DU-6408 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6410        TCGA-DU-6542        TCGA-DU-7006        TCGA-DU-7007 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7008        TCGA-DU-7009        TCGA-DU-7010        TCGA-DU-7011 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7012        TCGA-DU-7013        TCGA-DU-7014        TCGA-DU-7015 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7018        TCGA-DU-7019        TCGA-DU-7290        TCGA-DU-7292 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7294        TCGA-DU-7298        TCGA-DU-7300        TCGA-DU-7301 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7302        TCGA-DU-7304        TCGA-DU-7306        TCGA-DU-7309 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8158        TCGA-DU-8161        TCGA-DU-8162        TCGA-DU-8163 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8164        TCGA-DU-8165        TCGA-DU-8166        TCGA-DU-8167 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8168        TCGA-DU-A5TP        TCGA-DU-A5TR        TCGA-DU-A5TS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A5TT        TCGA-DU-A5TU        TCGA-DU-A5TW        TCGA-DU-A5TY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A6S2        TCGA-DU-A6S3        TCGA-DU-A6S6        TCGA-DU-A6S7 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L        TCGA-DU-A76O 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7T8        TCGA-DU-A7TA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A7TB        TCGA-DU-A7TC        TCGA-DU-A7TD        TCGA-DU-A7TG 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A7TI        TCGA-DU-A7TJ        TCGA-E1-5302        TCGA-E1-5303 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5304        TCGA-E1-5305        TCGA-E1-5307        TCGA-E1-5311 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5318        TCGA-E1-5319        TCGA-E1-5322        TCGA-E1-A7YD 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YE        TCGA-E1-A7YH        TCGA-E1-A7YI        TCGA-E1-A7YJ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YK        TCGA-E1-A7YL        TCGA-E1-A7YM        TCGA-E1-A7YN 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YO        TCGA-E1-A7YQ        TCGA-E1-A7YS        TCGA-E1-A7YU 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YV        TCGA-E1-A7YW        TCGA-E1-A7YY        TCGA-E1-A7Z2 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7Z3        TCGA-E1-A7Z4        TCGA-E1-A7Z6        TCGA-EZ-7264 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-F6-A8O3        TCGA-F6-A8O4        TCGA-FG-5962        TCGA-FG-5963 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-5964        TCGA-FG-5965        TCGA-FG-6688        TCGA-FG-6689 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-6690        TCGA-FG-6691        TCGA-FG-6692        TCGA-FG-7634 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-7636        TCGA-FG-7637        TCGA-FG-7638        TCGA-FG-7641 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-7643        TCGA-FG-8181        TCGA-FG-8182        TCGA-FG-8185 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8186        TCGA-FG-8187        TCGA-FG-8188        TCGA-FG-8189 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8191        TCGA-FG-A4MT        TCGA-FG-A4MU        TCGA-FG-A4MW 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A4MX        TCGA-FG-A4MY        TCGA-FG-A60J        TCGA-FG-A60K 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A60L        TCGA-FG-A6IZ        TCGA-FG-A6J1        TCGA-FG-A6J3 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A70Y        TCGA-FG-A70Z        TCGA-FG-A710        TCGA-FG-A711 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A713        TCGA-FG-A87N        TCGA-FG-A87Q        TCGA-FN-7833 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7467        TCGA-HT-7468        TCGA-HT-7469        TCGA-HT-7470 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7471        TCGA-HT-7472        TCGA-HT-7473        TCGA-HT-7474 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7475        TCGA-HT-7476        TCGA-HT-7477        TCGA-HT-7478 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7479        TCGA-HT-7480        TCGA-HT-7481        TCGA-HT-7482 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7483        TCGA-HT-7485        TCGA-HT-7601        TCGA-HT-7602 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7603        TCGA-HT-7604        TCGA-HT-7605        TCGA-HT-7606 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7607        TCGA-HT-7608        TCGA-HT-7609        TCGA-HT-7610 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7611        TCGA-HT-7616        TCGA-HT-7620        TCGA-HT-7676 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7677        TCGA-HT-7680        TCGA-HT-7681        TCGA-HT-7684 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7686        TCGA-HT-7687        TCGA-HT-7688        TCGA-HT-7689 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7690        TCGA-HT-7691        TCGA-HT-7692        TCGA-HT-7693 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7694        TCGA-HT-7695        TCGA-HT-7854        TCGA-HT-7855 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7856        TCGA-HT-7857        TCGA-HT-7858        TCGA-HT-7860 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7873        TCGA-HT-7874        TCGA-HT-7875        TCGA-HT-7877 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7879        TCGA-HT-7880        TCGA-HT-7881        TCGA-HT-7882 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7884        TCGA-HT-7902        TCGA-HT-8010        TCGA-HT-8011 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8012        TCGA-HT-8013        TCGA-HT-8015        TCGA-HT-8018 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8019        TCGA-HT-8104        TCGA-HT-8105        TCGA-HT-8106 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8107        TCGA-HT-8108        TCGA-HT-8109        TCGA-HT-8110 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8111        TCGA-HT-8113        TCGA-HT-8114        TCGA-HT-8558 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8563        TCGA-HT-8564        TCGA-HT-A4DS        TCGA-HT-A4DV 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A5R5        TCGA-HT-A5R7        TCGA-HT-A5R9        TCGA-HT-A5RA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A5RB        TCGA-HT-A5RC        TCGA-HT-A614        TCGA-HT-A615 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A616        TCGA-HT-A617        TCGA-HT-A618        TCGA-HT-A619 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A61A        TCGA-HT-A61B        TCGA-HT-A61C        TCGA-HT-A74H 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A74J        TCGA-HT-A74K        TCGA-HT-A74L        TCGA-HT-A74O 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-7486        TCGA-HW-7487        TCGA-HW-7489        TCGA-HW-7490 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-7491        TCGA-HW-7493        TCGA-HW-7495        TCGA-HW-8319 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-8320        TCGA-HW-8321        TCGA-HW-8322        TCGA-HW-A5KJ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-A5KK        TCGA-HW-A5KL        TCGA-HW-A5KM        TCGA-IK-7675 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-IK-8125        TCGA-KT-A74X        TCGA-KT-A7W1        TCGA-P5-A5ET 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5EU        TCGA-P5-A5EV        TCGA-P5-A5EW        TCGA-P5-A5EX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5EY        TCGA-P5-A5EZ        TCGA-P5-A5F0        TCGA-P5-A5F1 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5F2        TCGA-P5-A5F4        TCGA-P5-A5F6        TCGA-P5-A72U 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A72W        TCGA-P5-A72X        TCGA-P5-A72Z        TCGA-P5-A730 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A731        TCGA-P5-A733        TCGA-P5-A735        TCGA-P5-A736 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A737        TCGA-P5-A77W        TCGA-P5-A77X        TCGA-P5-A780 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A781        TCGA-QH-A65R        TCGA-QH-A65S        TCGA-QH-A65V 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A65X        TCGA-QH-A65Z        TCGA-QH-A6CS        TCGA-QH-A6CU 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6CV        TCGA-QH-A6CW        TCGA-QH-A6CX        TCGA-QH-A6CY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6CZ        TCGA-QH-A6X3        TCGA-QH-A6X4        TCGA-QH-A6X5 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6X8        TCGA-QH-A6X9        TCGA-QH-A6XA        TCGA-QH-A6XC 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A86X        TCGA-QH-A870        TCGA-R8-A6MK        TCGA-R8-A6ML 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-R8-A6MO        TCGA-R8-A6YH        TCGA-R8-A73M        TCGA-RY-A83X 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-RY-A83Y        TCGA-RY-A83Z        TCGA-RY-A840        TCGA-RY-A843 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-RY-A845        TCGA-RY-A847        TCGA-S9-A6TS        TCGA-S9-A6TU 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6TV        TCGA-S9-A6TW        TCGA-S9-A6TX        TCGA-S9-A6TY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6TZ        TCGA-S9-A6U0        TCGA-S9-A6U1        TCGA-S9-A6U2 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U8        TCGA-S9-A6U9 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6UA        TCGA-S9-A6UB        TCGA-S9-A6WD        TCGA-S9-A6WE 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WG        TCGA-S9-A6WH        TCGA-S9-A6WI        TCGA-S9-A6WL 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WM        TCGA-S9-A6WN        TCGA-S9-A6WO        TCGA-S9-A6WP 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WQ        TCGA-S9-A7IQ        TCGA-S9-A7IS        TCGA-S9-A7IX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7IY        TCGA-S9-A7IZ        TCGA-S9-A7J0        TCGA-S9-A7J1 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7J2        TCGA-S9-A7J3        TCGA-S9-A7QW        TCGA-S9-A7QX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7QY        TCGA-S9-A7QZ        TCGA-S9-A7R1        TCGA-S9-A7R2 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7R3        TCGA-S9-A7R4        TCGA-S9-A7R7        TCGA-S9-A7R8 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A89V        TCGA-S9-A89Z        TCGA-TM-A7C3        TCGA-TM-A7C4 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A7C5        TCGA-TM-A7CA        TCGA-TM-A7CF        TCGA-TM-A84B 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84C        TCGA-TM-A84F        TCGA-TM-A84G        TCGA-TM-A84H 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84I        TCGA-TM-A84J        TCGA-TM-A84L        TCGA-TM-A84M 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84O        TCGA-TM-A84Q        TCGA-TM-A84R        TCGA-TM-A84S 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84T        TCGA-TQ-A7RF        TCGA-TQ-A7RG        TCGA-TQ-A7RH 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RI        TCGA-TQ-A7RJ        TCGA-TQ-A7RK        TCGA-TQ-A7RM 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RN        TCGA-TQ-A7RO        TCGA-TQ-A7RP        TCGA-TQ-A7RQ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RU        TCGA-TQ-A7RV 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RW        TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CA        TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CF        TCGA-VM-A8CH        TCGA-VV-A829        TCGA-VV-A86M 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VW-A7QS        TCGA-VW-A8FI        TCGA-W9-A837        TCGA-WH-A86K 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-WY-A858        TCGA-WY-A859        TCGA-WY-A85A        TCGA-WY-A85B 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-WY-A85C        TCGA-WY-A85D        TCGA-WY-A85E 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC35A2 MUTATED        0      0      1      0
  SLC35A2 WILD-TYPE    185    155    137     95
D97V7, multiclass
[1] "Remove cluster labels:" "SLC35A2 MUTATED"       
clus
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                1               572 
       TCGA-02-0003        TCGA-02-2470        TCGA-02-2485        TCGA-06-0126 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0128        TCGA-06-0129        TCGA-06-0130        TCGA-06-0154 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0155        TCGA-06-0189        TCGA-06-0238        TCGA-06-0644 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0650        TCGA-06-0875        TCGA-06-0876        TCGA-06-0877 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0878        TCGA-06-0879        TCGA-06-0882        TCGA-06-0939 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-1804        TCGA-06-1806        TCGA-06-2557        TCGA-06-2558 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2559        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2570        TCGA-06-5408 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-0692        TCGA-12-1597        TCGA-12-3649        TCGA-12-3650 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-3652        TCGA-12-3653        TCGA-12-5295        TCGA-12-5301 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0862        TCGA-14-0871        TCGA-14-1823 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-16-0846        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2625        TCGA-19-2631        TCGA-19-4068 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5947        TCGA-19-5950        TCGA-19-5951        TCGA-19-5952 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5953        TCGA-19-5954        TCGA-19-5955        TCGA-19-5958 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5959        TCGA-19-5960        TCGA-26-1442        TCGA-26-5132 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-5133        TCGA-26-5134        TCGA-26-6173        TCGA-26-6174 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1836        TCGA-27-2518        TCGA-27-2528 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-1747        TCGA-28-1753        TCGA-28-2501        TCGA-28-5208 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5214        TCGA-32-1970        TCGA-32-1982        TCGA-32-1986 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-1991        TCGA-32-4210        TCGA-32-4211        TCGA-32-5222 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-41-6646 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-74-6573        TCGA-74-6575        TCGA-74-6577        TCGA-74-6578 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-74-6584        TCGA-76-4926        TCGA-76-4927        TCGA-76-4928 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-4929        TCGA-76-4931        TCGA-76-4932        TCGA-76-6192 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6193        TCGA-76-6282        TCGA-76-6283        TCGA-76-6285 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-4938        TCGA-CS-4942        TCGA-CS-4943        TCGA-CS-4944 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-5390        TCGA-CS-5393        TCGA-CS-5394        TCGA-CS-5396 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-5397        TCGA-CS-6186        TCGA-CS-6188        TCGA-CS-6665 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6666        TCGA-CS-6668        TCGA-CS-6669        TCGA-CS-6670 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274        TCGA-DB-5275 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278        TCGA-DB-5279 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5280        TCGA-DB-5281        TCGA-DB-A4X9        TCGA-DB-A4XA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XB        TCGA-DB-A4XC        TCGA-DB-A4XD        TCGA-DB-A4XE 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XF        TCGA-DB-A4XG        TCGA-DB-A4XH        TCGA-DB-A64L 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64O        TCGA-DB-A64P        TCGA-DB-A64Q        TCGA-DB-A64S 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64U        TCGA-DB-A64V        TCGA-DB-A64W        TCGA-DB-A64X 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A75K        TCGA-DB-A75L        TCGA-DB-A75M        TCGA-DB-A75O 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A75P        TCGA-DH-5140        TCGA-DH-5141        TCGA-DH-5142 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-5143        TCGA-DH-5144        TCGA-DH-A66B        TCGA-DH-A66D 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A66F        TCGA-DH-A66G        TCGA-DH-A7US        TCGA-DU-5847 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5849        TCGA-DU-5851        TCGA-DU-5852        TCGA-DU-5853 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5854        TCGA-DU-5855        TCGA-DU-5870        TCGA-DU-5871 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5872        TCGA-DU-5874        TCGA-DU-6392        TCGA-DU-6393 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6394        TCGA-DU-6395        TCGA-DU-6396        TCGA-DU-6397 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6399        TCGA-DU-6400        TCGA-DU-6401        TCGA-DU-6402 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6403        TCGA-DU-6404        TCGA-DU-6405        TCGA-DU-6406 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6407        TCGA-DU-6408        TCGA-DU-6410        TCGA-DU-6542 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7006        TCGA-DU-7007        TCGA-DU-7008        TCGA-DU-7009 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7010        TCGA-DU-7011        TCGA-DU-7012        TCGA-DU-7013 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7014        TCGA-DU-7015        TCGA-DU-7018        TCGA-DU-7019 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7290        TCGA-DU-7292        TCGA-DU-7294        TCGA-DU-7298 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7300        TCGA-DU-7301        TCGA-DU-7302        TCGA-DU-7304 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7306        TCGA-DU-7309        TCGA-DU-8158        TCGA-DU-8161 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8162        TCGA-DU-8163        TCGA-DU-8164        TCGA-DU-8165 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8166        TCGA-DU-8167        TCGA-DU-8168        TCGA-DU-A5TP 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A5TR        TCGA-DU-A5TS        TCGA-DU-A5TT        TCGA-DU-A5TU 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A5TW        TCGA-DU-A5TY        TCGA-DU-A6S2        TCGA-DU-A6S3 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L        TCGA-DU-A76O 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7TA        TCGA-DU-A7TB 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A7TD        TCGA-DU-A7TG        TCGA-DU-A7TI        TCGA-DU-A7TJ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5302        TCGA-E1-5303        TCGA-E1-5304        TCGA-E1-5305 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5307        TCGA-E1-5311        TCGA-E1-5318        TCGA-E1-5319 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5322        TCGA-E1-A7YH        TCGA-E1-A7YI        TCGA-E1-A7YJ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YL        TCGA-E1-A7YM        TCGA-E1-A7YN        TCGA-E1-A7YQ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YS        TCGA-E1-A7YV        TCGA-E1-A7YW        TCGA-E1-A7YY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7Z2        TCGA-E1-A7Z3        TCGA-E1-A7Z6        TCGA-EZ-7264 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-F6-A8O3        TCGA-F6-A8O4        TCGA-FG-5962        TCGA-FG-5963 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-5964        TCGA-FG-5965        TCGA-FG-6688        TCGA-FG-6689 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-6690        TCGA-FG-6691        TCGA-FG-7634        TCGA-FG-7636 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-7637        TCGA-FG-7638        TCGA-FG-7641        TCGA-FG-7643 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8181        TCGA-FG-8182        TCGA-FG-8185        TCGA-FG-8186 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8187        TCGA-FG-8188        TCGA-FG-8189        TCGA-FG-8191 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A4MT        TCGA-FG-A4MU        TCGA-FG-A4MW        TCGA-FG-A4MX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A4MY        TCGA-FG-A60J        TCGA-FG-A60L        TCGA-FG-A6IZ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A6J3        TCGA-FG-A70Y        TCGA-FG-A70Z        TCGA-FG-A710 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A713        TCGA-FG-A87N        TCGA-FG-A87Q        TCGA-HT-7467 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7468        TCGA-HT-7469        TCGA-HT-7470        TCGA-HT-7471 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7472        TCGA-HT-7473        TCGA-HT-7474        TCGA-HT-7475 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7476        TCGA-HT-7477        TCGA-HT-7478        TCGA-HT-7479 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7480        TCGA-HT-7481        TCGA-HT-7482        TCGA-HT-7483 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7485        TCGA-HT-7601        TCGA-HT-7602        TCGA-HT-7603 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7604        TCGA-HT-7605        TCGA-HT-7606        TCGA-HT-7607 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7608        TCGA-HT-7609        TCGA-HT-7610        TCGA-HT-7611 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7616        TCGA-HT-7620        TCGA-HT-7676        TCGA-HT-7677 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7680        TCGA-HT-7681        TCGA-HT-7684        TCGA-HT-7686 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7687        TCGA-HT-7688        TCGA-HT-7689        TCGA-HT-7690 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7691        TCGA-HT-7692        TCGA-HT-7693        TCGA-HT-7694 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7695        TCGA-HT-7854        TCGA-HT-7855        TCGA-HT-7856 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7857        TCGA-HT-7858        TCGA-HT-7860        TCGA-HT-7873 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7874        TCGA-HT-7875        TCGA-HT-7877        TCGA-HT-7879 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7880        TCGA-HT-7881        TCGA-HT-7882        TCGA-HT-7884 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7902        TCGA-HT-8010        TCGA-HT-8011        TCGA-HT-8012 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8013        TCGA-HT-8015        TCGA-HT-8018        TCGA-HT-8019 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8104        TCGA-HT-8105        TCGA-HT-8106        TCGA-HT-8107 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8109        TCGA-HT-8110        TCGA-HT-8111        TCGA-HT-8113 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8114        TCGA-HT-8558        TCGA-HT-8564        TCGA-HT-A4DV 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A5R5        TCGA-HT-A5R7        TCGA-HT-A5R9        TCGA-HT-A5RB 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A614        TCGA-HT-A615        TCGA-HT-A616        TCGA-HT-A617 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A618        TCGA-HT-A619        TCGA-HT-A61A        TCGA-HT-A61B 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A74H        TCGA-HT-A74J        TCGA-HT-A74L        TCGA-HT-A74O 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-7486        TCGA-HW-7487        TCGA-HW-7489        TCGA-HW-7490 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-7491        TCGA-HW-7493        TCGA-HW-7495        TCGA-HW-8319 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-8320        TCGA-HW-8321        TCGA-HW-8322        TCGA-HW-A5KJ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-A5KK        TCGA-HW-A5KM        TCGA-IK-7675        TCGA-IK-8125 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-KT-A74X        TCGA-P5-A5ET        TCGA-P5-A5EU        TCGA-P5-A5EV 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5EW        TCGA-P5-A5EX        TCGA-P5-A5EY        TCGA-P5-A5EZ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5F0        TCGA-P5-A5F1        TCGA-P5-A5F2        TCGA-P5-A5F4 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5F6        TCGA-P5-A72U        TCGA-P5-A72W        TCGA-P5-A72X 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A72Z        TCGA-P5-A730        TCGA-P5-A731        TCGA-P5-A733 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A735        TCGA-P5-A736        TCGA-P5-A737        TCGA-P5-A77W 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A77X        TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65S 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A65V        TCGA-QH-A65X        TCGA-QH-A65Z        TCGA-QH-A6CS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6CU        TCGA-QH-A6CV        TCGA-QH-A6CW        TCGA-QH-A6CX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6CY        TCGA-QH-A6CZ        TCGA-QH-A6X4        TCGA-QH-A6X5 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6X8        TCGA-QH-A6X9        TCGA-QH-A6XA        TCGA-QH-A6XC 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A86X        TCGA-QH-A870        TCGA-R8-A6MK        TCGA-R8-A6ML 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-R8-A6MO        TCGA-R8-A6YH        TCGA-RY-A83X        TCGA-RY-A83Y 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-RY-A83Z        TCGA-RY-A843        TCGA-RY-A845        TCGA-S9-A6TS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6TU        TCGA-S9-A6TV        TCGA-S9-A6TX        TCGA-S9-A6TY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6U0        TCGA-S9-A6U1        TCGA-S9-A6U5        TCGA-S9-A6U6 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6U9        TCGA-S9-A6WD        TCGA-S9-A6WE        TCGA-S9-A6WG 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WH        TCGA-S9-A6WN        TCGA-S9-A6WP        TCGA-S9-A6WQ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7IQ        TCGA-S9-A7IS        TCGA-S9-A7IY        TCGA-S9-A7IZ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7J0        TCGA-S9-A7J1        TCGA-S9-A7J2        TCGA-S9-A7QX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7QZ        TCGA-S9-A7R1        TCGA-S9-A7R4        TCGA-S9-A7R8 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A7C5        TCGA-TM-A84R        TCGA-TM-A84S        TCGA-TQ-A7RF 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RG        TCGA-TQ-A7RH        TCGA-TQ-A7RK        TCGA-TQ-A7RN 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RQ        TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RV 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RW        TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CA        TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CH        TCGA-VV-A829        TCGA-VV-A86M        TCGA-VW-A7QS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-W9-A837        TCGA-WY-A85B        TCGA-WY-A85C        TCGA-WY-A85D 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC35A2 MUTATED        1      0      0
  SLC35A2 WILD-TYPE    204    220    148
D97V8, multiclass
[1] "Remove cluster labels:" "SLC35A2 MUTATED"       
clus
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                1               572 
       TCGA-02-0003        TCGA-02-2470        TCGA-02-2485        TCGA-06-0126 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0128        TCGA-06-0129        TCGA-06-0130        TCGA-06-0154 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0155        TCGA-06-0189        TCGA-06-0238        TCGA-06-0644 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0650        TCGA-06-0875        TCGA-06-0876        TCGA-06-0877 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-0878        TCGA-06-0879        TCGA-06-0882        TCGA-06-0939 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-1804        TCGA-06-1806        TCGA-06-2557        TCGA-06-2558 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2559        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2570        TCGA-06-5408 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-0692        TCGA-12-1597        TCGA-12-3649        TCGA-12-3650 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-12-3652        TCGA-12-3653        TCGA-12-5295        TCGA-12-5301 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0862        TCGA-14-0871        TCGA-14-1823 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-16-0846        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2625        TCGA-19-2631        TCGA-19-4068 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5947        TCGA-19-5950        TCGA-19-5951        TCGA-19-5952 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5953        TCGA-19-5954        TCGA-19-5955        TCGA-19-5958 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-19-5959        TCGA-19-5960        TCGA-26-1442        TCGA-26-5132 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-26-5133        TCGA-26-5134        TCGA-26-6173        TCGA-26-6174 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1836        TCGA-27-2518        TCGA-27-2528 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-1747        TCGA-28-1753        TCGA-28-2501        TCGA-28-5208 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-28-5214        TCGA-32-1970        TCGA-32-1982        TCGA-32-1986 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-32-1991        TCGA-32-4210        TCGA-32-4211        TCGA-32-5222 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-41-6646 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-74-6573        TCGA-74-6575        TCGA-74-6577        TCGA-74-6578 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-74-6584        TCGA-76-4926        TCGA-76-4927        TCGA-76-4928 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-4929        TCGA-76-4931        TCGA-76-4932        TCGA-76-6192 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6193        TCGA-76-6282        TCGA-76-6283        TCGA-76-6285 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-4938        TCGA-CS-4942        TCGA-CS-4943        TCGA-CS-4944 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-5390        TCGA-CS-5393        TCGA-CS-5394        TCGA-CS-5396 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-5397        TCGA-CS-6186        TCGA-CS-6188        TCGA-CS-6665 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6666        TCGA-CS-6668        TCGA-CS-6669        TCGA-CS-6670 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274        TCGA-DB-5275 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278        TCGA-DB-5279 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5280        TCGA-DB-5281        TCGA-DB-A4X9        TCGA-DB-A4XA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XB        TCGA-DB-A4XC        TCGA-DB-A4XD        TCGA-DB-A4XE 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XF        TCGA-DB-A4XG        TCGA-DB-A4XH        TCGA-DB-A64L 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64O        TCGA-DB-A64P        TCGA-DB-A64Q        TCGA-DB-A64S 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64U        TCGA-DB-A64V        TCGA-DB-A64W        TCGA-DB-A64X 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A75K        TCGA-DB-A75L        TCGA-DB-A75M        TCGA-DB-A75O 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A75P        TCGA-DH-5140        TCGA-DH-5141        TCGA-DH-5142 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-5143        TCGA-DH-5144        TCGA-DH-A66B        TCGA-DH-A66D 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A66F        TCGA-DH-A66G        TCGA-DH-A7US        TCGA-DU-5847 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5849        TCGA-DU-5851        TCGA-DU-5852        TCGA-DU-5853 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5854        TCGA-DU-5855        TCGA-DU-5870        TCGA-DU-5871 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5872        TCGA-DU-5874        TCGA-DU-6392        TCGA-DU-6393 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6394        TCGA-DU-6395        TCGA-DU-6396        TCGA-DU-6397 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6399        TCGA-DU-6400        TCGA-DU-6401        TCGA-DU-6402 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6403        TCGA-DU-6404        TCGA-DU-6405        TCGA-DU-6406 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6407        TCGA-DU-6408        TCGA-DU-6410        TCGA-DU-6542 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7006        TCGA-DU-7007        TCGA-DU-7008        TCGA-DU-7009 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7010        TCGA-DU-7011        TCGA-DU-7012        TCGA-DU-7013 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7014        TCGA-DU-7015        TCGA-DU-7018        TCGA-DU-7019 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7290        TCGA-DU-7292        TCGA-DU-7294        TCGA-DU-7298 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7300        TCGA-DU-7301        TCGA-DU-7302        TCGA-DU-7304 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7306        TCGA-DU-7309        TCGA-DU-8158        TCGA-DU-8161 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8162        TCGA-DU-8163        TCGA-DU-8164        TCGA-DU-8165 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8166        TCGA-DU-8167        TCGA-DU-8168        TCGA-DU-A5TP 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A5TR        TCGA-DU-A5TS        TCGA-DU-A5TT        TCGA-DU-A5TU 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A5TW        TCGA-DU-A5TY        TCGA-DU-A6S2        TCGA-DU-A6S3 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L        TCGA-DU-A76O 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7TA        TCGA-DU-A7TB 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A7TD        TCGA-DU-A7TG        TCGA-DU-A7TI        TCGA-DU-A7TJ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5302        TCGA-E1-5303        TCGA-E1-5304        TCGA-E1-5305 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5307        TCGA-E1-5311        TCGA-E1-5318        TCGA-E1-5319 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5322        TCGA-E1-A7YH        TCGA-E1-A7YI        TCGA-E1-A7YJ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YL        TCGA-E1-A7YM        TCGA-E1-A7YN        TCGA-E1-A7YQ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YS        TCGA-E1-A7YV        TCGA-E1-A7YW        TCGA-E1-A7YY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7Z2        TCGA-E1-A7Z3        TCGA-E1-A7Z6        TCGA-EZ-7264 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-F6-A8O3        TCGA-F6-A8O4        TCGA-FG-5962        TCGA-FG-5963 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-5964        TCGA-FG-5965        TCGA-FG-6688        TCGA-FG-6689 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-6690        TCGA-FG-6691        TCGA-FG-7634        TCGA-FG-7636 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-7637        TCGA-FG-7638        TCGA-FG-7641        TCGA-FG-7643 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8181        TCGA-FG-8182        TCGA-FG-8185        TCGA-FG-8186 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8187        TCGA-FG-8188        TCGA-FG-8189        TCGA-FG-8191 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A4MT        TCGA-FG-A4MU        TCGA-FG-A4MW        TCGA-FG-A4MX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A4MY        TCGA-FG-A60J        TCGA-FG-A60L        TCGA-FG-A6IZ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A6J3        TCGA-FG-A70Y        TCGA-FG-A70Z        TCGA-FG-A710 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A713        TCGA-FG-A87N        TCGA-FG-A87Q        TCGA-HT-7467 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7468        TCGA-HT-7469        TCGA-HT-7470        TCGA-HT-7471 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7472        TCGA-HT-7473        TCGA-HT-7474        TCGA-HT-7475 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7476        TCGA-HT-7477        TCGA-HT-7478        TCGA-HT-7479 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7480        TCGA-HT-7481        TCGA-HT-7482        TCGA-HT-7483 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7485        TCGA-HT-7601        TCGA-HT-7602        TCGA-HT-7603 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7604        TCGA-HT-7605        TCGA-HT-7606        TCGA-HT-7607 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7608        TCGA-HT-7609        TCGA-HT-7610        TCGA-HT-7611 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7616        TCGA-HT-7620        TCGA-HT-7676        TCGA-HT-7677 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7680        TCGA-HT-7681        TCGA-HT-7684        TCGA-HT-7686 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7687        TCGA-HT-7688        TCGA-HT-7689        TCGA-HT-7690 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7691        TCGA-HT-7692        TCGA-HT-7693        TCGA-HT-7694 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7695        TCGA-HT-7854        TCGA-HT-7855        TCGA-HT-7856 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7857        TCGA-HT-7858        TCGA-HT-7860        TCGA-HT-7873 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7874        TCGA-HT-7875        TCGA-HT-7877        TCGA-HT-7879 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7880        TCGA-HT-7881        TCGA-HT-7882        TCGA-HT-7884 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7902        TCGA-HT-8010        TCGA-HT-8011        TCGA-HT-8012 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8013        TCGA-HT-8015        TCGA-HT-8018        TCGA-HT-8019 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8104        TCGA-HT-8105        TCGA-HT-8106        TCGA-HT-8107 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8109        TCGA-HT-8110        TCGA-HT-8111        TCGA-HT-8113 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8114        TCGA-HT-8558        TCGA-HT-8564        TCGA-HT-A4DV 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A5R5        TCGA-HT-A5R7        TCGA-HT-A5R9        TCGA-HT-A5RB 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A614        TCGA-HT-A615        TCGA-HT-A616        TCGA-HT-A617 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A618        TCGA-HT-A619        TCGA-HT-A61A        TCGA-HT-A61B 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A74H        TCGA-HT-A74J        TCGA-HT-A74L        TCGA-HT-A74O 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-7486        TCGA-HW-7487        TCGA-HW-7489        TCGA-HW-7490 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-7491        TCGA-HW-7493        TCGA-HW-7495        TCGA-HW-8319 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-8320        TCGA-HW-8321        TCGA-HW-8322        TCGA-HW-A5KJ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-A5KK        TCGA-HW-A5KM        TCGA-IK-7675        TCGA-IK-8125 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-KT-A74X        TCGA-P5-A5ET        TCGA-P5-A5EU        TCGA-P5-A5EV 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5EW        TCGA-P5-A5EX        TCGA-P5-A5EY        TCGA-P5-A5EZ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5F0        TCGA-P5-A5F1        TCGA-P5-A5F2        TCGA-P5-A5F4 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5F6        TCGA-P5-A72U        TCGA-P5-A72W        TCGA-P5-A72X 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A72Z        TCGA-P5-A730        TCGA-P5-A731        TCGA-P5-A733 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A735        TCGA-P5-A736        TCGA-P5-A737        TCGA-P5-A77W 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A77X        TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65S 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A65V        TCGA-QH-A65X        TCGA-QH-A65Z        TCGA-QH-A6CS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6CU        TCGA-QH-A6CV        TCGA-QH-A6CW        TCGA-QH-A6CX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6CY        TCGA-QH-A6CZ        TCGA-QH-A6X4        TCGA-QH-A6X5 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6X8        TCGA-QH-A6X9        TCGA-QH-A6XA        TCGA-QH-A6XC 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A86X        TCGA-QH-A870        TCGA-R8-A6MK        TCGA-R8-A6ML 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-R8-A6MO        TCGA-R8-A6YH        TCGA-RY-A83X        TCGA-RY-A83Y 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-RY-A83Z        TCGA-RY-A843        TCGA-RY-A845        TCGA-S9-A6TS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6TU        TCGA-S9-A6TV        TCGA-S9-A6TX        TCGA-S9-A6TY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6U0        TCGA-S9-A6U1        TCGA-S9-A6U5        TCGA-S9-A6U6 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6U9        TCGA-S9-A6WD        TCGA-S9-A6WE        TCGA-S9-A6WG 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WH        TCGA-S9-A6WN        TCGA-S9-A6WP        TCGA-S9-A6WQ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7IQ        TCGA-S9-A7IS        TCGA-S9-A7IY        TCGA-S9-A7IZ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7J0        TCGA-S9-A7J1        TCGA-S9-A7J2        TCGA-S9-A7QX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7QZ        TCGA-S9-A7R1        TCGA-S9-A7R4        TCGA-S9-A7R8 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A7C5        TCGA-TM-A84R        TCGA-TM-A84S        TCGA-TQ-A7RF 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RG        TCGA-TQ-A7RH        TCGA-TQ-A7RK        TCGA-TQ-A7RN 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RQ        TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RV 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RW        TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CA        TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CH        TCGA-VV-A829        TCGA-VV-A86M        TCGA-VW-A7QS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-W9-A837        TCGA-WY-A85B        TCGA-WY-A85C        TCGA-WY-A85D 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC35A2 MUTATED        1      1      1
  SLC35A2 WILD-TYPE    237    190    227
D97V9, multiclass
        clus
vv       SLC35A2 MUTATED SLC35A2 WILD-TYPE
  CLUS_1               1               237
  CLUS_2               1               190
  CLUS_3               1               227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC35A2 MUTATED        1      1      1
  SLC35A2 WILD-TYPE    195    190    269
D97V10, multiclass
        clus
vv       SLC35A2 MUTATED SLC35A2 WILD-TYPE
  CLUS_1               1               195
  CLUS_2               1               190
  CLUS_3               1               269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC35A2 MUTATED        0      0      0      2
  SLC35A2 WILD-TYPE    140    107     83    180
D97V11, multiclass
[1] "Remove cluster labels:" "SLC35A2 MUTATED"       
clus
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                2               510 
       TCGA-CS-4938        TCGA-CS-4941        TCGA-CS-4942        TCGA-CS-4943 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-4944        TCGA-CS-5390        TCGA-CS-5393        TCGA-CS-5394 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-5395        TCGA-CS-5396        TCGA-CS-5397        TCGA-CS-6186 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6188        TCGA-CS-6290        TCGA-CS-6665        TCGA-CS-6666 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6667        TCGA-CS-6668        TCGA-CS-6669        TCGA-CS-6670 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274        TCGA-DB-5275 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278        TCGA-DB-5279 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5280        TCGA-DB-5281        TCGA-DB-A4X9        TCGA-DB-A4XA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XB        TCGA-DB-A4XC        TCGA-DB-A4XD        TCGA-DB-A4XE 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XF        TCGA-DB-A4XG        TCGA-DB-A4XH        TCGA-DB-A64L 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64O        TCGA-DB-A64P        TCGA-DB-A64Q        TCGA-DB-A64S 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64U        TCGA-DB-A64V        TCGA-DB-A64W        TCGA-DB-A64X 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A75K        TCGA-DB-A75L        TCGA-DB-A75O        TCGA-DB-A75P 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-5140        TCGA-DH-5141        TCGA-DH-5142        TCGA-DH-5143 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-5144        TCGA-DH-A669        TCGA-DH-A66B        TCGA-DH-A66D 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A66F        TCGA-DH-A66G        TCGA-DH-A7UR        TCGA-DH-A7US 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A7UT        TCGA-DH-A7UU        TCGA-DH-A7UV        TCGA-DU-5847 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5849        TCGA-DU-5851        TCGA-DU-5852        TCGA-DU-5853 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5854        TCGA-DU-5855        TCGA-DU-5870        TCGA-DU-5871 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5872        TCGA-DU-5874        TCGA-DU-6392        TCGA-DU-6393 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6394        TCGA-DU-6395        TCGA-DU-6396        TCGA-DU-6397 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6399        TCGA-DU-6400        TCGA-DU-6401        TCGA-DU-6402 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6403        TCGA-DU-6404        TCGA-DU-6405        TCGA-DU-6406 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6407        TCGA-DU-6408        TCGA-DU-6410        TCGA-DU-6542 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7006        TCGA-DU-7007        TCGA-DU-7008        TCGA-DU-7009 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7010        TCGA-DU-7012        TCGA-DU-7013        TCGA-DU-7014 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7015        TCGA-DU-7018        TCGA-DU-7019        TCGA-DU-7290 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7292        TCGA-DU-7294        TCGA-DU-7298        TCGA-DU-7300 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7301        TCGA-DU-7302        TCGA-DU-7304        TCGA-DU-7306 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7309        TCGA-DU-8158        TCGA-DU-8161        TCGA-DU-8162 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8163        TCGA-DU-8164        TCGA-DU-8165        TCGA-DU-8166 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8167        TCGA-DU-8168        TCGA-DU-A5TP        TCGA-DU-A5TR 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A5TS        TCGA-DU-A5TT        TCGA-DU-A5TU        TCGA-DU-A5TW 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A5TY        TCGA-DU-A6S2        TCGA-DU-A6S3        TCGA-DU-A6S6 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A6S7        TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A76O        TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7T8 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A7TA        TCGA-DU-A7TB        TCGA-DU-A7TC        TCGA-DU-A7TD 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A7TG        TCGA-DU-A7TI        TCGA-DU-A7TJ        TCGA-E1-5302 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5303        TCGA-E1-5304        TCGA-E1-5305        TCGA-E1-5307 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5311        TCGA-E1-5318        TCGA-E1-5319        TCGA-E1-5322 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YD        TCGA-E1-A7YE        TCGA-E1-A7YH        TCGA-E1-A7YI 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YJ        TCGA-E1-A7YK        TCGA-E1-A7YL        TCGA-E1-A7YM 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YN        TCGA-E1-A7YO        TCGA-E1-A7YQ        TCGA-E1-A7YS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YU        TCGA-E1-A7YV        TCGA-E1-A7YW        TCGA-E1-A7YY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7Z2        TCGA-E1-A7Z3        TCGA-E1-A7Z4        TCGA-E1-A7Z6 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-EZ-7264        TCGA-F6-A8O3        TCGA-F6-A8O4        TCGA-FG-5962 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-5963        TCGA-FG-5964        TCGA-FG-5965        TCGA-FG-6688 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-6689        TCGA-FG-6690        TCGA-FG-6691        TCGA-FG-6692 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-7634        TCGA-FG-7636        TCGA-FG-7637        TCGA-FG-7638 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-7641        TCGA-FG-7643        TCGA-FG-8181        TCGA-FG-8182 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8185        TCGA-FG-8186        TCGA-FG-8187        TCGA-FG-8188 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8189        TCGA-FG-8191        TCGA-FG-A4MT        TCGA-FG-A4MU 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A4MW        TCGA-FG-A4MX        TCGA-FG-A4MY        TCGA-FG-A60J 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A60K        TCGA-FG-A60L        TCGA-FG-A6IZ        TCGA-FG-A6J1 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A6J3        TCGA-FG-A70Y        TCGA-FG-A70Z        TCGA-FG-A710 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A711        TCGA-FG-A713        TCGA-FG-A87N        TCGA-FG-A87Q 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FN-7833        TCGA-HT-7467        TCGA-HT-7468        TCGA-HT-7469 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7470        TCGA-HT-7471        TCGA-HT-7472        TCGA-HT-7473 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7474        TCGA-HT-7475        TCGA-HT-7476        TCGA-HT-7477 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7478        TCGA-HT-7479        TCGA-HT-7480        TCGA-HT-7481 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7482        TCGA-HT-7483        TCGA-HT-7485        TCGA-HT-7601 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7602        TCGA-HT-7603        TCGA-HT-7604        TCGA-HT-7605 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7606        TCGA-HT-7607        TCGA-HT-7608        TCGA-HT-7609 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7610        TCGA-HT-7611        TCGA-HT-7616        TCGA-HT-7620 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7676        TCGA-HT-7677        TCGA-HT-7680        TCGA-HT-7681 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7684        TCGA-HT-7686        TCGA-HT-7687        TCGA-HT-7688 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7689        TCGA-HT-7690        TCGA-HT-7691        TCGA-HT-7692 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7693        TCGA-HT-7694        TCGA-HT-7695        TCGA-HT-7854 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7855        TCGA-HT-7856        TCGA-HT-7857        TCGA-HT-7858 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7860        TCGA-HT-7873        TCGA-HT-7874        TCGA-HT-7875 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7877        TCGA-HT-7879        TCGA-HT-7880        TCGA-HT-7881 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7882        TCGA-HT-7884        TCGA-HT-7902        TCGA-HT-8010 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8011        TCGA-HT-8012        TCGA-HT-8013        TCGA-HT-8015 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8018        TCGA-HT-8019        TCGA-HT-8104        TCGA-HT-8105 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8106        TCGA-HT-8107        TCGA-HT-8108        TCGA-HT-8109 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8110        TCGA-HT-8111        TCGA-HT-8113        TCGA-HT-8114 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8558        TCGA-HT-8563        TCGA-HT-8564        TCGA-HT-A4DS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A4DV        TCGA-HT-A5R5        TCGA-HT-A5R7        TCGA-HT-A5R9 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A5RA        TCGA-HT-A5RB        TCGA-HT-A5RC        TCGA-HT-A614 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A615        TCGA-HT-A616        TCGA-HT-A617        TCGA-HT-A618 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A619        TCGA-HT-A61A        TCGA-HT-A61B        TCGA-HT-A61C 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A74H        TCGA-HT-A74K        TCGA-HT-A74L        TCGA-HT-A74O 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-7486        TCGA-HW-7487        TCGA-HW-7489        TCGA-HW-7490 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-7491        TCGA-HW-7493        TCGA-HW-7495        TCGA-HW-8319 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-8320        TCGA-HW-8321        TCGA-HW-8322        TCGA-HW-A5KJ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-A5KK        TCGA-HW-A5KL        TCGA-HW-A5KM        TCGA-IK-7675 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-IK-8125        TCGA-KT-A74X        TCGA-KT-A7W1        TCGA-P5-A5ET 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5EU        TCGA-P5-A5EV        TCGA-P5-A5EW        TCGA-P5-A5EX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5EY        TCGA-P5-A5EZ        TCGA-P5-A5F0        TCGA-P5-A5F1 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5F2        TCGA-P5-A5F4        TCGA-P5-A5F6        TCGA-P5-A72U 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A72W        TCGA-P5-A72X        TCGA-P5-A72Z        TCGA-P5-A730 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A731        TCGA-P5-A733        TCGA-P5-A735        TCGA-P5-A736 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A737        TCGA-P5-A77W        TCGA-P5-A77X        TCGA-P5-A780 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A781        TCGA-QH-A65R        TCGA-QH-A65S        TCGA-QH-A65V 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A65X        TCGA-QH-A65Z        TCGA-QH-A6CS        TCGA-QH-A6CU 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6CV        TCGA-QH-A6CX        TCGA-QH-A6CY        TCGA-QH-A6CZ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6X3        TCGA-QH-A6X4        TCGA-QH-A6X5        TCGA-QH-A6X8 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6X9        TCGA-QH-A6XA        TCGA-QH-A6XC        TCGA-QH-A86X 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A870        TCGA-R8-A6MK        TCGA-R8-A6ML        TCGA-R8-A6MO 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-R8-A6YH        TCGA-R8-A73M        TCGA-RY-A83X        TCGA-RY-A83Y 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-RY-A83Z        TCGA-RY-A840        TCGA-RY-A843        TCGA-RY-A845 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-RY-A847        TCGA-S9-A6TS        TCGA-S9-A6TU        TCGA-S9-A6TV 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6TW        TCGA-S9-A6TX        TCGA-S9-A6TY        TCGA-S9-A6TZ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6U0        TCGA-S9-A6U1        TCGA-S9-A6U2        TCGA-S9-A6U5 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6U6        TCGA-S9-A6U8        TCGA-S9-A6U9        TCGA-S9-A6UA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6UB        TCGA-S9-A6WD        TCGA-S9-A6WE        TCGA-S9-A6WG 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WH        TCGA-S9-A6WI        TCGA-S9-A6WL        TCGA-S9-A6WM 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WN        TCGA-S9-A6WO        TCGA-S9-A6WP        TCGA-S9-A6WQ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7IQ        TCGA-S9-A7IS        TCGA-S9-A7IX        TCGA-S9-A7IY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7IZ        TCGA-S9-A7J0        TCGA-S9-A7J1        TCGA-S9-A7J2 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7J3        TCGA-S9-A7QW        TCGA-S9-A7QX        TCGA-S9-A7QY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7QZ        TCGA-S9-A7R1        TCGA-S9-A7R2        TCGA-S9-A7R3 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7R4        TCGA-S9-A7R7        TCGA-S9-A7R8        TCGA-S9-A89V 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A89Z        TCGA-TM-A7C3        TCGA-TM-A7C4        TCGA-TM-A7C5 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A7CA        TCGA-TM-A7CF        TCGA-TM-A84B        TCGA-TM-A84C 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84F        TCGA-TM-A84G        TCGA-TM-A84H        TCGA-TM-A84I 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84J        TCGA-TM-A84L        TCGA-TM-A84M        TCGA-TM-A84O 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84Q        TCGA-TM-A84R        TCGA-TM-A84S        TCGA-TM-A84T 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RF        TCGA-TQ-A7RG        TCGA-TQ-A7RH        TCGA-TQ-A7RI 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RJ        TCGA-TQ-A7RK        TCGA-TQ-A7RM        TCGA-TQ-A7RN 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RO        TCGA-TQ-A7RP        TCGA-TQ-A7RQ        TCGA-TQ-A7RR 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RS        TCGA-TQ-A7RU        TCGA-TQ-A7RV        TCGA-TQ-A7RW 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9        TCGA-VM-A8CA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE        TCGA-VM-A8CF 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CH        TCGA-VV-A829        TCGA-VV-A86M        TCGA-VW-A7QS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VW-A8FI        TCGA-W9-A837        TCGA-WH-A86K        TCGA-WY-A858 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-WY-A859        TCGA-WY-A85A        TCGA-WY-A85B        TCGA-WY-A85C 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-WY-A85D        TCGA-WY-A85E 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC35A2 MUTATED        1      1      0
  SLC35A2 WILD-TYPE    222    185    103
D97V12, multiclass
[1] "Remove cluster labels:" "SLC35A2 MUTATED"       
clus
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                2               510 
       TCGA-CS-4938        TCGA-CS-4941        TCGA-CS-4942        TCGA-CS-4943 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-4944        TCGA-CS-5390        TCGA-CS-5393        TCGA-CS-5394 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-5395        TCGA-CS-5396        TCGA-CS-5397        TCGA-CS-6186 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6188        TCGA-CS-6290        TCGA-CS-6665        TCGA-CS-6666 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6667        TCGA-CS-6668        TCGA-CS-6669        TCGA-CS-6670 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274        TCGA-DB-5275 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278        TCGA-DB-5279 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5280        TCGA-DB-5281        TCGA-DB-A4X9        TCGA-DB-A4XA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XB        TCGA-DB-A4XC        TCGA-DB-A4XD        TCGA-DB-A4XE 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XF        TCGA-DB-A4XG        TCGA-DB-A4XH        TCGA-DB-A64L 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64O        TCGA-DB-A64P        TCGA-DB-A64Q        TCGA-DB-A64S 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64U        TCGA-DB-A64V        TCGA-DB-A64W        TCGA-DB-A64X 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A75K        TCGA-DB-A75L        TCGA-DB-A75O        TCGA-DB-A75P 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-5140        TCGA-DH-5141        TCGA-DH-5142        TCGA-DH-5143 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-5144        TCGA-DH-A669        TCGA-DH-A66B        TCGA-DH-A66D 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A66F        TCGA-DH-A66G        TCGA-DH-A7UR        TCGA-DH-A7US 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A7UT        TCGA-DH-A7UU        TCGA-DH-A7UV        TCGA-DU-5847 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5849        TCGA-DU-5851        TCGA-DU-5852        TCGA-DU-5853 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5854        TCGA-DU-5855        TCGA-DU-5870        TCGA-DU-5871 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5872        TCGA-DU-5874        TCGA-DU-6392        TCGA-DU-6393 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6394        TCGA-DU-6395        TCGA-DU-6396        TCGA-DU-6397 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6399        TCGA-DU-6400        TCGA-DU-6401        TCGA-DU-6402 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6403        TCGA-DU-6404        TCGA-DU-6405        TCGA-DU-6406 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6407        TCGA-DU-6408        TCGA-DU-6410        TCGA-DU-6542 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7006        TCGA-DU-7007        TCGA-DU-7008        TCGA-DU-7009 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7010        TCGA-DU-7012        TCGA-DU-7013        TCGA-DU-7014 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7015        TCGA-DU-7018        TCGA-DU-7019        TCGA-DU-7290 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7292        TCGA-DU-7294        TCGA-DU-7298        TCGA-DU-7300 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7301        TCGA-DU-7302        TCGA-DU-7304        TCGA-DU-7306 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7309        TCGA-DU-8158        TCGA-DU-8161        TCGA-DU-8162 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8163        TCGA-DU-8164        TCGA-DU-8165        TCGA-DU-8166 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8167        TCGA-DU-8168        TCGA-DU-A5TP        TCGA-DU-A5TR 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A5TS        TCGA-DU-A5TT        TCGA-DU-A5TU        TCGA-DU-A5TW 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A5TY        TCGA-DU-A6S2        TCGA-DU-A6S3        TCGA-DU-A6S6 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A6S7        TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A76O        TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7T8 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A7TA        TCGA-DU-A7TB        TCGA-DU-A7TC        TCGA-DU-A7TD 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A7TG        TCGA-DU-A7TI        TCGA-DU-A7TJ        TCGA-E1-5302 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5303        TCGA-E1-5304        TCGA-E1-5305        TCGA-E1-5307 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5311        TCGA-E1-5318        TCGA-E1-5319        TCGA-E1-5322 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YD        TCGA-E1-A7YE        TCGA-E1-A7YH        TCGA-E1-A7YI 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YJ        TCGA-E1-A7YK        TCGA-E1-A7YL        TCGA-E1-A7YM 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YN        TCGA-E1-A7YO        TCGA-E1-A7YQ        TCGA-E1-A7YS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YU        TCGA-E1-A7YV        TCGA-E1-A7YW        TCGA-E1-A7YY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7Z2        TCGA-E1-A7Z3        TCGA-E1-A7Z4        TCGA-E1-A7Z6 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-EZ-7264        TCGA-F6-A8O3        TCGA-F6-A8O4        TCGA-FG-5962 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-5963        TCGA-FG-5964        TCGA-FG-5965        TCGA-FG-6688 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-6689        TCGA-FG-6690        TCGA-FG-6691        TCGA-FG-6692 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-7634        TCGA-FG-7636        TCGA-FG-7637        TCGA-FG-7638 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-7641        TCGA-FG-7643        TCGA-FG-8181        TCGA-FG-8182 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8185        TCGA-FG-8186        TCGA-FG-8187        TCGA-FG-8188 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8189        TCGA-FG-8191        TCGA-FG-A4MT        TCGA-FG-A4MU 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A4MW        TCGA-FG-A4MX        TCGA-FG-A4MY        TCGA-FG-A60J 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A60K        TCGA-FG-A60L        TCGA-FG-A6IZ        TCGA-FG-A6J1 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A6J3        TCGA-FG-A70Y        TCGA-FG-A70Z        TCGA-FG-A710 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A711        TCGA-FG-A713        TCGA-FG-A87N        TCGA-FG-A87Q 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FN-7833        TCGA-HT-7467        TCGA-HT-7468        TCGA-HT-7469 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7470        TCGA-HT-7471        TCGA-HT-7472        TCGA-HT-7473 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7474        TCGA-HT-7475        TCGA-HT-7476        TCGA-HT-7477 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7478        TCGA-HT-7479        TCGA-HT-7480        TCGA-HT-7481 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7482        TCGA-HT-7483        TCGA-HT-7485        TCGA-HT-7601 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7602        TCGA-HT-7603        TCGA-HT-7604        TCGA-HT-7605 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7606        TCGA-HT-7607        TCGA-HT-7608        TCGA-HT-7609 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7610        TCGA-HT-7611        TCGA-HT-7616        TCGA-HT-7620 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7676        TCGA-HT-7677        TCGA-HT-7680        TCGA-HT-7681 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7684        TCGA-HT-7686        TCGA-HT-7687        TCGA-HT-7688 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7689        TCGA-HT-7690        TCGA-HT-7691        TCGA-HT-7692 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7693        TCGA-HT-7694        TCGA-HT-7695        TCGA-HT-7854 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7855        TCGA-HT-7856        TCGA-HT-7857        TCGA-HT-7858 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7860        TCGA-HT-7873        TCGA-HT-7874        TCGA-HT-7875 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7877        TCGA-HT-7879        TCGA-HT-7880        TCGA-HT-7881 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7882        TCGA-HT-7884        TCGA-HT-7902        TCGA-HT-8010 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8011        TCGA-HT-8012        TCGA-HT-8013        TCGA-HT-8015 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8018        TCGA-HT-8019        TCGA-HT-8104        TCGA-HT-8105 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8106        TCGA-HT-8107        TCGA-HT-8108        TCGA-HT-8109 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8110        TCGA-HT-8111        TCGA-HT-8113        TCGA-HT-8114 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8558        TCGA-HT-8563        TCGA-HT-8564        TCGA-HT-A4DS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A4DV        TCGA-HT-A5R5        TCGA-HT-A5R7        TCGA-HT-A5R9 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A5RA        TCGA-HT-A5RB        TCGA-HT-A5RC        TCGA-HT-A614 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A615        TCGA-HT-A616        TCGA-HT-A617        TCGA-HT-A618 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A619        TCGA-HT-A61A        TCGA-HT-A61B        TCGA-HT-A61C 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A74H        TCGA-HT-A74K        TCGA-HT-A74L        TCGA-HT-A74O 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-7486        TCGA-HW-7487        TCGA-HW-7489        TCGA-HW-7490 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-7491        TCGA-HW-7493        TCGA-HW-7495        TCGA-HW-8319 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-8320        TCGA-HW-8321        TCGA-HW-8322        TCGA-HW-A5KJ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-A5KK        TCGA-HW-A5KL        TCGA-HW-A5KM        TCGA-IK-7675 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-IK-8125        TCGA-KT-A74X        TCGA-KT-A7W1        TCGA-P5-A5ET 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5EU        TCGA-P5-A5EV        TCGA-P5-A5EW        TCGA-P5-A5EX 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5EY        TCGA-P5-A5EZ        TCGA-P5-A5F0        TCGA-P5-A5F1 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5F2        TCGA-P5-A5F4        TCGA-P5-A5F6        TCGA-P5-A72U 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A72W        TCGA-P5-A72X        TCGA-P5-A72Z        TCGA-P5-A730 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A731        TCGA-P5-A733        TCGA-P5-A735        TCGA-P5-A736 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A737        TCGA-P5-A77W        TCGA-P5-A77X        TCGA-P5-A780 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A781        TCGA-QH-A65R        TCGA-QH-A65S        TCGA-QH-A65V 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A65X        TCGA-QH-A65Z        TCGA-QH-A6CS        TCGA-QH-A6CU 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6CV        TCGA-QH-A6CX        TCGA-QH-A6CY        TCGA-QH-A6CZ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6X3        TCGA-QH-A6X4        TCGA-QH-A6X5        TCGA-QH-A6X8 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6X9        TCGA-QH-A6XA        TCGA-QH-A6XC        TCGA-QH-A86X 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A870        TCGA-R8-A6MK        TCGA-R8-A6ML        TCGA-R8-A6MO 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-R8-A6YH        TCGA-R8-A73M        TCGA-RY-A83X        TCGA-RY-A83Y 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-RY-A83Z        TCGA-RY-A840        TCGA-RY-A843        TCGA-RY-A845 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-RY-A847        TCGA-S9-A6TS        TCGA-S9-A6TU        TCGA-S9-A6TV 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6TW        TCGA-S9-A6TX        TCGA-S9-A6TY        TCGA-S9-A6TZ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6U0        TCGA-S9-A6U1        TCGA-S9-A6U2        TCGA-S9-A6U5 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6U6        TCGA-S9-A6U8        TCGA-S9-A6U9        TCGA-S9-A6UA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6UB        TCGA-S9-A6WD        TCGA-S9-A6WE        TCGA-S9-A6WG 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WH        TCGA-S9-A6WI        TCGA-S9-A6WL        TCGA-S9-A6WM 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WN        TCGA-S9-A6WO        TCGA-S9-A6WP        TCGA-S9-A6WQ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7IQ        TCGA-S9-A7IS        TCGA-S9-A7IX        TCGA-S9-A7IY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7IZ        TCGA-S9-A7J0        TCGA-S9-A7J1        TCGA-S9-A7J2 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7J3        TCGA-S9-A7QW        TCGA-S9-A7QX        TCGA-S9-A7QY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7QZ        TCGA-S9-A7R1        TCGA-S9-A7R2        TCGA-S9-A7R3 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7R4        TCGA-S9-A7R7        TCGA-S9-A7R8        TCGA-S9-A89V 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A89Z        TCGA-TM-A7C3        TCGA-TM-A7C4        TCGA-TM-A7C5 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A7CA        TCGA-TM-A7CF        TCGA-TM-A84B        TCGA-TM-A84C 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84F        TCGA-TM-A84G        TCGA-TM-A84H        TCGA-TM-A84I 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84J        TCGA-TM-A84L        TCGA-TM-A84M        TCGA-TM-A84O 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84Q        TCGA-TM-A84R        TCGA-TM-A84S        TCGA-TM-A84T 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RF        TCGA-TQ-A7RG        TCGA-TQ-A7RH        TCGA-TQ-A7RI 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RJ        TCGA-TQ-A7RK        TCGA-TQ-A7RM        TCGA-TQ-A7RN 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RO        TCGA-TQ-A7RP        TCGA-TQ-A7RQ        TCGA-TQ-A7RR 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RS        TCGA-TQ-A7RU        TCGA-TQ-A7RV        TCGA-TQ-A7RW 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9        TCGA-VM-A8CA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE        TCGA-VM-A8CF 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CH        TCGA-VV-A829        TCGA-VV-A86M        TCGA-VW-A7QS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VW-A8FI        TCGA-W9-A837        TCGA-WH-A86K        TCGA-WY-A858 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-WY-A859        TCGA-WY-A85A        TCGA-WY-A85B        TCGA-WY-A85C 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-WY-A85D        TCGA-WY-A85E 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC35A2 MUTATED        1      0      1      0
  SLC35A2 WILD-TYPE    126    119    105    156
D97V13, multiclass
[1] "Remove cluster labels:" "SLC35A2 MUTATED"       
clus
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                2               506 
       TCGA-CS-4938        TCGA-CS-4941        TCGA-CS-4942        TCGA-CS-4943 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-4944        TCGA-CS-5390        TCGA-CS-5393        TCGA-CS-5394 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-5395        TCGA-CS-5396        TCGA-CS-5397        TCGA-CS-6186 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6188        TCGA-CS-6290        TCGA-CS-6665        TCGA-CS-6666 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6667        TCGA-CS-6668        TCGA-CS-6669        TCGA-CS-6670 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274        TCGA-DB-5275 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278        TCGA-DB-5279 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5281        TCGA-DB-A4X9        TCGA-DB-A4XA        TCGA-DB-A4XB 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XC        TCGA-DB-A4XD        TCGA-DB-A4XE        TCGA-DB-A4XF 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XG        TCGA-DB-A4XH        TCGA-DB-A64L        TCGA-DB-A64O 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64P        TCGA-DB-A64Q        TCGA-DB-A64S        TCGA-DB-A64U 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64V        TCGA-DB-A64W        TCGA-DB-A64X        TCGA-DB-A75K 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A75L        TCGA-DB-A75O        TCGA-DB-A75P        TCGA-DH-5140 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-5141        TCGA-DH-5142        TCGA-DH-5143        TCGA-DH-5144 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A669        TCGA-DH-A66B        TCGA-DH-A66D        TCGA-DH-A66F 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A66G        TCGA-DH-A7UR        TCGA-DH-A7US        TCGA-DH-A7UT 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A7UU        TCGA-DH-A7UV        TCGA-DU-5847        TCGA-DU-5849 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5851        TCGA-DU-5852        TCGA-DU-5853        TCGA-DU-5854 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5855        TCGA-DU-5870        TCGA-DU-5871        TCGA-DU-5872 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5874        TCGA-DU-6392        TCGA-DU-6393        TCGA-DU-6394 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6395        TCGA-DU-6396        TCGA-DU-6397        TCGA-DU-6399 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6400        TCGA-DU-6401        TCGA-DU-6402        TCGA-DU-6403 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6404        TCGA-DU-6405        TCGA-DU-6406        TCGA-DU-6407 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6408        TCGA-DU-6410        TCGA-DU-6542        TCGA-DU-7006 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7007        TCGA-DU-7008        TCGA-DU-7009        TCGA-DU-7010 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7012        TCGA-DU-7013        TCGA-DU-7014        TCGA-DU-7015 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7018        TCGA-DU-7019        TCGA-DU-7290        TCGA-DU-7292 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7294        TCGA-DU-7298        TCGA-DU-7300        TCGA-DU-7301 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7302        TCGA-DU-7304        TCGA-DU-7306        TCGA-DU-7309 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8158        TCGA-DU-8161        TCGA-DU-8162        TCGA-DU-8163 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8164        TCGA-DU-8165        TCGA-DU-8166        TCGA-DU-8167 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8168        TCGA-DU-A5TP        TCGA-DU-A5TR        TCGA-DU-A5TS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A5TT        TCGA-DU-A5TU        TCGA-DU-A5TW        TCGA-DU-A5TY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A6S2        TCGA-DU-A6S3        TCGA-DU-A6S6        TCGA-DU-A6S7 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L        TCGA-DU-A76O 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7T8        TCGA-DU-A7TA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A7TB        TCGA-DU-A7TC        TCGA-DU-A7TD        TCGA-DU-A7TG 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A7TI        TCGA-DU-A7TJ        TCGA-E1-5302        TCGA-E1-5303 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5304        TCGA-E1-5305        TCGA-E1-5307        TCGA-E1-5311 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5318        TCGA-E1-5319        TCGA-E1-5322        TCGA-E1-A7YD 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YE        TCGA-E1-A7YH        TCGA-E1-A7YI        TCGA-E1-A7YJ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YK        TCGA-E1-A7YL        TCGA-E1-A7YM        TCGA-E1-A7YN 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YO        TCGA-E1-A7YQ        TCGA-E1-A7YS        TCGA-E1-A7YU 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YV        TCGA-E1-A7YW        TCGA-E1-A7YY        TCGA-E1-A7Z2 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7Z3        TCGA-E1-A7Z4        TCGA-E1-A7Z6        TCGA-EZ-7264 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-F6-A8O3        TCGA-F6-A8O4        TCGA-FG-5962        TCGA-FG-5963 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-5964        TCGA-FG-5965        TCGA-FG-6688        TCGA-FG-6689 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-6690        TCGA-FG-6691        TCGA-FG-6692        TCGA-FG-7634 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-7636        TCGA-FG-7637        TCGA-FG-7638        TCGA-FG-7641 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-7643        TCGA-FG-8181        TCGA-FG-8182        TCGA-FG-8185 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8186        TCGA-FG-8187        TCGA-FG-8188        TCGA-FG-8189 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8191        TCGA-FG-A4MT        TCGA-FG-A4MU        TCGA-FG-A4MW 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A4MX        TCGA-FG-A4MY        TCGA-FG-A60J        TCGA-FG-A60K 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A60L        TCGA-FG-A6IZ        TCGA-FG-A6J1        TCGA-FG-A6J3 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A70Y        TCGA-FG-A70Z        TCGA-FG-A710        TCGA-FG-A711 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A713        TCGA-FG-A87N        TCGA-FG-A87Q        TCGA-FN-7833 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7467        TCGA-HT-7468        TCGA-HT-7469        TCGA-HT-7470 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7471        TCGA-HT-7472        TCGA-HT-7473        TCGA-HT-7474 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7475        TCGA-HT-7476        TCGA-HT-7477        TCGA-HT-7478 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7479        TCGA-HT-7480        TCGA-HT-7481        TCGA-HT-7482 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7483        TCGA-HT-7485        TCGA-HT-7601        TCGA-HT-7602 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7603        TCGA-HT-7604        TCGA-HT-7605        TCGA-HT-7606 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7607        TCGA-HT-7608        TCGA-HT-7609        TCGA-HT-7610 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7611        TCGA-HT-7616        TCGA-HT-7620        TCGA-HT-7676 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7677        TCGA-HT-7680        TCGA-HT-7681        TCGA-HT-7684 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7686        TCGA-HT-7687        TCGA-HT-7688        TCGA-HT-7689 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7690        TCGA-HT-7691        TCGA-HT-7692        TCGA-HT-7693 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7694        TCGA-HT-7695        TCGA-HT-7854        TCGA-HT-7855 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7856        TCGA-HT-7857        TCGA-HT-7858        TCGA-HT-7860 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7873        TCGA-HT-7874        TCGA-HT-7875        TCGA-HT-7877 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7879        TCGA-HT-7880        TCGA-HT-7881        TCGA-HT-7882 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7884        TCGA-HT-7902        TCGA-HT-8010        TCGA-HT-8011 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8012        TCGA-HT-8013        TCGA-HT-8015        TCGA-HT-8018 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8019        TCGA-HT-8104        TCGA-HT-8105        TCGA-HT-8106 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8107        TCGA-HT-8108        TCGA-HT-8109        TCGA-HT-8110 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8111        TCGA-HT-8113        TCGA-HT-8114        TCGA-HT-8558 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8563        TCGA-HT-8564        TCGA-HT-A4DS        TCGA-HT-A4DV 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A5R5        TCGA-HT-A5R7        TCGA-HT-A5R9        TCGA-HT-A5RA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A5RB        TCGA-HT-A5RC        TCGA-HT-A614        TCGA-HT-A615 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A616        TCGA-HT-A617        TCGA-HT-A618        TCGA-HT-A619 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A61A        TCGA-HT-A61B        TCGA-HT-A61C        TCGA-HT-A74H 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A74K        TCGA-HT-A74L        TCGA-HT-A74O        TCGA-HW-7486 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-7487        TCGA-HW-7489        TCGA-HW-7490        TCGA-HW-7491 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-7493        TCGA-HW-7495        TCGA-HW-8319        TCGA-HW-8320 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-8321        TCGA-HW-8322        TCGA-HW-A5KJ        TCGA-HW-A5KK 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-A5KL        TCGA-HW-A5KM        TCGA-IK-7675        TCGA-IK-8125 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-KT-A74X        TCGA-KT-A7W1        TCGA-P5-A5ET        TCGA-P5-A5EU 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5EV        TCGA-P5-A5EW        TCGA-P5-A5EX        TCGA-P5-A5EY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5EZ        TCGA-P5-A5F0        TCGA-P5-A5F1        TCGA-P5-A5F2 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5F4        TCGA-P5-A72U        TCGA-P5-A72W        TCGA-P5-A72X 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A72Z        TCGA-P5-A730        TCGA-P5-A731        TCGA-P5-A733 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A735        TCGA-P5-A737        TCGA-P5-A77W        TCGA-P5-A77X 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65R        TCGA-QH-A65S 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A65V        TCGA-QH-A65X        TCGA-QH-A65Z        TCGA-QH-A6CS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6CU        TCGA-QH-A6CV        TCGA-QH-A6CX        TCGA-QH-A6CY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6CZ        TCGA-QH-A6X3        TCGA-QH-A6X4        TCGA-QH-A6X5 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6X8        TCGA-QH-A6X9        TCGA-QH-A6XA        TCGA-QH-A6XC 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A86X        TCGA-QH-A870        TCGA-R8-A6MK        TCGA-R8-A6ML 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-R8-A6MO        TCGA-R8-A6YH        TCGA-R8-A73M        TCGA-RY-A83X 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-RY-A83Y        TCGA-RY-A83Z        TCGA-RY-A840        TCGA-RY-A843 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-RY-A845        TCGA-RY-A847        TCGA-S9-A6TS        TCGA-S9-A6TU 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6TV        TCGA-S9-A6TW        TCGA-S9-A6TX        TCGA-S9-A6TY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6TZ        TCGA-S9-A6U0        TCGA-S9-A6U1        TCGA-S9-A6U2 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U8        TCGA-S9-A6UA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6UB        TCGA-S9-A6WD        TCGA-S9-A6WE        TCGA-S9-A6WG 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WH        TCGA-S9-A6WI        TCGA-S9-A6WL        TCGA-S9-A6WM 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WN        TCGA-S9-A6WO        TCGA-S9-A6WP        TCGA-S9-A6WQ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7IQ        TCGA-S9-A7IS        TCGA-S9-A7IX        TCGA-S9-A7IY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7IZ        TCGA-S9-A7J0        TCGA-S9-A7J1        TCGA-S9-A7J2 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7J3        TCGA-S9-A7QW        TCGA-S9-A7QX        TCGA-S9-A7QY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7QZ        TCGA-S9-A7R1        TCGA-S9-A7R2        TCGA-S9-A7R3 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7R4        TCGA-S9-A7R7        TCGA-S9-A7R8        TCGA-S9-A89V 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A89Z        TCGA-TM-A7C3        TCGA-TM-A7C4        TCGA-TM-A7C5 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A7CA        TCGA-TM-A7CF        TCGA-TM-A84B        TCGA-TM-A84C 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84F        TCGA-TM-A84G        TCGA-TM-A84H        TCGA-TM-A84I 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84J        TCGA-TM-A84L        TCGA-TM-A84M        TCGA-TM-A84O 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84Q        TCGA-TM-A84R        TCGA-TM-A84S        TCGA-TM-A84T 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RF        TCGA-TQ-A7RG        TCGA-TQ-A7RH        TCGA-TQ-A7RI 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RJ        TCGA-TQ-A7RK        TCGA-TQ-A7RM        TCGA-TQ-A7RN 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RO        TCGA-TQ-A7RP        TCGA-TQ-A7RQ        TCGA-TQ-A7RR 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RS        TCGA-TQ-A7RU        TCGA-TQ-A7RV        TCGA-TQ-A7RW 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9        TCGA-VM-A8CA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE        TCGA-VM-A8CF 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CH        TCGA-VV-A829        TCGA-VV-A86M        TCGA-VW-A7QS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VW-A8FI        TCGA-W9-A837        TCGA-WH-A86K        TCGA-WY-A858 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-WY-A859        TCGA-WY-A85A        TCGA-WY-A85B        TCGA-WY-A85C 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-WY-A85D        TCGA-WY-A85E 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  SLC35A2 MUTATED        1      0      0      0      0      1
  SLC35A2 WILD-TYPE     98     77    120     57     63     91
D97V14, multiclass
[1] "Remove cluster labels:" "SLC35A2 MUTATED"       
clus
  SLC35A2 MUTATED SLC35A2 WILD-TYPE 
                2               506 
       TCGA-CS-4938        TCGA-CS-4941        TCGA-CS-4942        TCGA-CS-4943 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-4944        TCGA-CS-5390        TCGA-CS-5393        TCGA-CS-5394 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-5395        TCGA-CS-5396        TCGA-CS-5397        TCGA-CS-6186 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6188        TCGA-CS-6290        TCGA-CS-6665        TCGA-CS-6666 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-CS-6667        TCGA-CS-6668        TCGA-CS-6669        TCGA-CS-6670 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274        TCGA-DB-5275 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278        TCGA-DB-5279 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-5281        TCGA-DB-A4X9        TCGA-DB-A4XA        TCGA-DB-A4XB 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XC        TCGA-DB-A4XD        TCGA-DB-A4XE        TCGA-DB-A4XF 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A4XG        TCGA-DB-A4XH        TCGA-DB-A64L        TCGA-DB-A64O 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64P        TCGA-DB-A64Q        TCGA-DB-A64S        TCGA-DB-A64U 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A64V        TCGA-DB-A64W        TCGA-DB-A64X        TCGA-DB-A75K 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DB-A75L        TCGA-DB-A75O        TCGA-DB-A75P        TCGA-DH-5140 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-5141        TCGA-DH-5142        TCGA-DH-5143        TCGA-DH-5144 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A669        TCGA-DH-A66B        TCGA-DH-A66D        TCGA-DH-A66F 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A66G        TCGA-DH-A7UR        TCGA-DH-A7US        TCGA-DH-A7UT 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DH-A7UU        TCGA-DH-A7UV        TCGA-DU-5847        TCGA-DU-5849 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5851        TCGA-DU-5852        TCGA-DU-5853        TCGA-DU-5854 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5855        TCGA-DU-5870        TCGA-DU-5871        TCGA-DU-5872 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-5874        TCGA-DU-6392        TCGA-DU-6393        TCGA-DU-6394 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6395        TCGA-DU-6396        TCGA-DU-6397        TCGA-DU-6399 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6400        TCGA-DU-6401        TCGA-DU-6402        TCGA-DU-6403 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6404        TCGA-DU-6405        TCGA-DU-6406        TCGA-DU-6407 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-6408        TCGA-DU-6410        TCGA-DU-6542        TCGA-DU-7006 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7007        TCGA-DU-7008        TCGA-DU-7009        TCGA-DU-7010 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7012        TCGA-DU-7013        TCGA-DU-7014        TCGA-DU-7015 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7018        TCGA-DU-7019        TCGA-DU-7290        TCGA-DU-7292 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7294        TCGA-DU-7298        TCGA-DU-7300        TCGA-DU-7301 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-7302        TCGA-DU-7304        TCGA-DU-7306        TCGA-DU-7309 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8158        TCGA-DU-8161        TCGA-DU-8162        TCGA-DU-8163 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8164        TCGA-DU-8165        TCGA-DU-8166        TCGA-DU-8167 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-8168        TCGA-DU-A5TP        TCGA-DU-A5TR        TCGA-DU-A5TS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A5TT        TCGA-DU-A5TU        TCGA-DU-A5TW        TCGA-DU-A5TY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A6S2        TCGA-DU-A6S3        TCGA-DU-A6S6        TCGA-DU-A6S7 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L        TCGA-DU-A76O 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7T8        TCGA-DU-A7TA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A7TB        TCGA-DU-A7TC        TCGA-DU-A7TD        TCGA-DU-A7TG 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-DU-A7TI        TCGA-DU-A7TJ        TCGA-E1-5302        TCGA-E1-5303 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5304        TCGA-E1-5305        TCGA-E1-5307        TCGA-E1-5311 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-5318        TCGA-E1-5319        TCGA-E1-5322        TCGA-E1-A7YD 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YE        TCGA-E1-A7YH        TCGA-E1-A7YI        TCGA-E1-A7YJ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YK        TCGA-E1-A7YL        TCGA-E1-A7YM        TCGA-E1-A7YN 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YO        TCGA-E1-A7YQ        TCGA-E1-A7YS        TCGA-E1-A7YU 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7YV        TCGA-E1-A7YW        TCGA-E1-A7YY        TCGA-E1-A7Z2 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-E1-A7Z3        TCGA-E1-A7Z4        TCGA-E1-A7Z6        TCGA-EZ-7264 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-F6-A8O3        TCGA-F6-A8O4        TCGA-FG-5962        TCGA-FG-5963 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-5964        TCGA-FG-5965        TCGA-FG-6688        TCGA-FG-6689 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-6690        TCGA-FG-6691        TCGA-FG-6692        TCGA-FG-7634 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-7636        TCGA-FG-7637        TCGA-FG-7638        TCGA-FG-7641 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-7643        TCGA-FG-8181        TCGA-FG-8182        TCGA-FG-8185 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8186        TCGA-FG-8187        TCGA-FG-8188        TCGA-FG-8189 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-8191        TCGA-FG-A4MT        TCGA-FG-A4MU        TCGA-FG-A4MW 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A4MX        TCGA-FG-A4MY        TCGA-FG-A60J        TCGA-FG-A60K 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A60L        TCGA-FG-A6IZ        TCGA-FG-A6J1        TCGA-FG-A6J3 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A70Y        TCGA-FG-A70Z        TCGA-FG-A710        TCGA-FG-A711 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-FG-A713        TCGA-FG-A87N        TCGA-FG-A87Q        TCGA-FN-7833 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7467        TCGA-HT-7468        TCGA-HT-7469        TCGA-HT-7470 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7471        TCGA-HT-7472        TCGA-HT-7473        TCGA-HT-7474 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7475        TCGA-HT-7476        TCGA-HT-7477        TCGA-HT-7478 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7479        TCGA-HT-7480        TCGA-HT-7481        TCGA-HT-7482 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7483        TCGA-HT-7485        TCGA-HT-7601        TCGA-HT-7602 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7603        TCGA-HT-7604        TCGA-HT-7605        TCGA-HT-7606 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7607        TCGA-HT-7608        TCGA-HT-7609        TCGA-HT-7610 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7611        TCGA-HT-7616        TCGA-HT-7620        TCGA-HT-7676 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7677        TCGA-HT-7680        TCGA-HT-7681        TCGA-HT-7684 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7686        TCGA-HT-7687        TCGA-HT-7688        TCGA-HT-7689 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7690        TCGA-HT-7691        TCGA-HT-7692        TCGA-HT-7693 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7694        TCGA-HT-7695        TCGA-HT-7854        TCGA-HT-7855 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7856        TCGA-HT-7857        TCGA-HT-7858        TCGA-HT-7860 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7873        TCGA-HT-7874        TCGA-HT-7875        TCGA-HT-7877 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7879        TCGA-HT-7880        TCGA-HT-7881        TCGA-HT-7882 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-7884        TCGA-HT-7902        TCGA-HT-8010        TCGA-HT-8011 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8012        TCGA-HT-8013        TCGA-HT-8015        TCGA-HT-8018 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8019        TCGA-HT-8104        TCGA-HT-8105        TCGA-HT-8106 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8107        TCGA-HT-8108        TCGA-HT-8109        TCGA-HT-8110 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8111        TCGA-HT-8113        TCGA-HT-8114        TCGA-HT-8558 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-8563        TCGA-HT-8564        TCGA-HT-A4DS        TCGA-HT-A4DV 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A5R5        TCGA-HT-A5R7        TCGA-HT-A5R9        TCGA-HT-A5RA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A5RB        TCGA-HT-A5RC        TCGA-HT-A614        TCGA-HT-A615 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A616        TCGA-HT-A617        TCGA-HT-A618        TCGA-HT-A619 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A61A        TCGA-HT-A61B        TCGA-HT-A61C        TCGA-HT-A74H 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HT-A74K        TCGA-HT-A74L        TCGA-HT-A74O        TCGA-HW-7486 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-7487        TCGA-HW-7489        TCGA-HW-7490        TCGA-HW-7491 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-7493        TCGA-HW-7495        TCGA-HW-8319        TCGA-HW-8320 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-8321        TCGA-HW-8322        TCGA-HW-A5KJ        TCGA-HW-A5KK 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-HW-A5KL        TCGA-HW-A5KM        TCGA-IK-7675        TCGA-IK-8125 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-KT-A74X        TCGA-KT-A7W1        TCGA-P5-A5ET        TCGA-P5-A5EU 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5EV        TCGA-P5-A5EW        TCGA-P5-A5EX        TCGA-P5-A5EY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5EZ        TCGA-P5-A5F0        TCGA-P5-A5F1        TCGA-P5-A5F2 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A5F4        TCGA-P5-A72U        TCGA-P5-A72W        TCGA-P5-A72X 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A72Z        TCGA-P5-A730        TCGA-P5-A731        TCGA-P5-A733 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A735        TCGA-P5-A737        TCGA-P5-A77W        TCGA-P5-A77X 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65R        TCGA-QH-A65S 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A65V        TCGA-QH-A65X        TCGA-QH-A65Z        TCGA-QH-A6CS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6CU        TCGA-QH-A6CV        TCGA-QH-A6CX        TCGA-QH-A6CY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6CZ        TCGA-QH-A6X3        TCGA-QH-A6X4        TCGA-QH-A6X5 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A6X8        TCGA-QH-A6X9        TCGA-QH-A6XA        TCGA-QH-A6XC 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-QH-A86X        TCGA-QH-A870        TCGA-R8-A6MK        TCGA-R8-A6ML 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-R8-A6MO        TCGA-R8-A6YH        TCGA-R8-A73M        TCGA-RY-A83X 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-RY-A83Y        TCGA-RY-A83Z        TCGA-RY-A840        TCGA-RY-A843 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-RY-A845        TCGA-RY-A847        TCGA-S9-A6TS        TCGA-S9-A6TU 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6TV        TCGA-S9-A6TW        TCGA-S9-A6TX        TCGA-S9-A6TY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6TZ        TCGA-S9-A6U0        TCGA-S9-A6U1        TCGA-S9-A6U2 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U8        TCGA-S9-A6UA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6UB        TCGA-S9-A6WD        TCGA-S9-A6WE        TCGA-S9-A6WG 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WH        TCGA-S9-A6WI        TCGA-S9-A6WL        TCGA-S9-A6WM 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A6WN        TCGA-S9-A6WO        TCGA-S9-A6WP        TCGA-S9-A6WQ 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7IQ        TCGA-S9-A7IS        TCGA-S9-A7IX        TCGA-S9-A7IY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7IZ        TCGA-S9-A7J0        TCGA-S9-A7J1        TCGA-S9-A7J2 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7J3        TCGA-S9-A7QW        TCGA-S9-A7QX        TCGA-S9-A7QY 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7QZ        TCGA-S9-A7R1        TCGA-S9-A7R2        TCGA-S9-A7R3 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A7R4        TCGA-S9-A7R7        TCGA-S9-A7R8        TCGA-S9-A89V 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-S9-A89Z        TCGA-TM-A7C3        TCGA-TM-A7C4        TCGA-TM-A7C5 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A7CA        TCGA-TM-A7CF        TCGA-TM-A84B        TCGA-TM-A84C 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84F        TCGA-TM-A84G        TCGA-TM-A84H        TCGA-TM-A84I 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84J        TCGA-TM-A84L        TCGA-TM-A84M        TCGA-TM-A84O 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TM-A84Q        TCGA-TM-A84R        TCGA-TM-A84S        TCGA-TM-A84T 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RF        TCGA-TQ-A7RG        TCGA-TQ-A7RH        TCGA-TQ-A7RI 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RJ        TCGA-TQ-A7RK        TCGA-TQ-A7RM        TCGA-TQ-A7RN 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RO        TCGA-TQ-A7RP        TCGA-TQ-A7RQ        TCGA-TQ-A7RR 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A7RS        TCGA-TQ-A7RU        TCGA-TQ-A7RV        TCGA-TQ-A7RW 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9        TCGA-VM-A8CA 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE        TCGA-VM-A8CF 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VM-A8CH        TCGA-VV-A829        TCGA-VV-A86M        TCGA-VW-A7QS 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-VW-A8FI        TCGA-W9-A837        TCGA-WH-A86K        TCGA-WY-A858 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-WY-A859        TCGA-WY-A85A        TCGA-WY-A85B        TCGA-WY-A85C 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 
       TCGA-WY-A85D        TCGA-WY-A85E 
"SLC35A2 WILD-TYPE" "SLC35A2 WILD-TYPE" 

Clustering(98) Variable = MYH8 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYH8 MUTATED        3      0      1      1
  MYH8 WILD-TYPE     75     41     63     56
D98V1, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            3             75
  CLUS_2            0             41
  CLUS_3            1             63
  CLUS_4            1             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYH8 MUTATED        1      1      2      1
  MYH8 WILD-TYPE     62     49     46     78
D98V2, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            1             62
  CLUS_2            1             49
  CLUS_3            2             46
  CLUS_4            1             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYH8 MUTATED        3      1      0      3
  MYH8 WILD-TYPE     67     97     44     60
D98V3, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            3             67
  CLUS_2            1             97
  CLUS_3            0             44
  CLUS_4            3             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYH8 MUTATED        1      3      3
  MYH8 WILD-TYPE    137     58     73
D98V4, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            1            137
  CLUS_2            3             58
  CLUS_3            3             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYH8 MUTATED       10     10      1
  MYH8 WILD-TYPE    282    422     61
D98V5, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1           10            282
  CLUS_2           10            422
  CLUS_3            1             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYH8 MUTATED        8      7      0      3
  MYH8 WILD-TYPE    145    216     88    158
D98V6, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            8            145
  CLUS_2            7            216
  CLUS_3            0             88
  CLUS_4            3            158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYH8 MUTATED        7      2      4      1
  MYH8 WILD-TYPE    178    153    134     94
D98V7, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            7            178
  CLUS_2            2            153
  CLUS_3            4            134
  CLUS_4            1             94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYH8 MUTATED        7      6      1
  MYH8 WILD-TYPE    198    214    147
D98V8, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            7            198
  CLUS_2            6            214
  CLUS_3            1            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYH8 MUTATED        9      6      2
  MYH8 WILD-TYPE    229    185    226
D98V9, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            9            229
  CLUS_2            6            185
  CLUS_3            2            226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYH8 MUTATED        5      7      5
  MYH8 WILD-TYPE    191    184    265
D98V10, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            5            191
  CLUS_2            7            184
  CLUS_3            5            265
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYH8 MUTATED        4      4      2      4
  MYH8 WILD-TYPE    136    103     81    178
D98V11, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            4            136
  CLUS_2            4            103
  CLUS_3            2             81
  CLUS_4            4            178
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYH8 MUTATED        6      3      5
  MYH8 WILD-TYPE    217    183     98
D98V12, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            6            217
  CLUS_2            3            183
  CLUS_3            5             98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYH8 MUTATED        2      4      2      6
  MYH8 WILD-TYPE    125    115    104    150
D98V13, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            2            125
  CLUS_2            4            115
  CLUS_3            2            104
  CLUS_4            6            150
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  MYH8 MUTATED        2      4      3      0      3      2
  MYH8 WILD-TYPE     97     73    117     57     60     90
D98V14, multiclass
        clus
vv       MYH8 MUTATED MYH8 WILD-TYPE
  CLUS_1            2             97
  CLUS_2            4             73
  CLUS_3            3            117
  CLUS_4            0             57
  CLUS_5            3             60
  CLUS_6            2             90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(99) Variable = SMARCA4 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCA4 MUTATED        1      0      0      0
  SMARCA4 WILD-TYPE     77     41     64     57
D99V1, multiclass
[1] "Remove cluster labels:" "SMARCA4 MUTATED"       
clus
  SMARCA4 MUTATED SMARCA4 WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6389 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-6390        TCGA-06-6391        TCGA-08-0386        TCGA-12-0616 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-0618        TCGA-12-0619        TCGA-12-0688        TCGA-12-0692 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-0821        TCGA-12-1597        TCGA-12-3649        TCGA-12-3650 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-3652        TCGA-12-3653        TCGA-12-5295        TCGA-12-5299 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-5301        TCGA-14-0781        TCGA-14-0786        TCGA-14-0787 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-0789        TCGA-14-0790        TCGA-14-0813        TCGA-14-0817 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1456        TCGA-14-1823        TCGA-14-1825 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-1829        TCGA-14-2554        TCGA-14-3476        TCGA-14-4157 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-15-0742        TCGA-15-1444        TCGA-16-0846        TCGA-16-0861 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-16-1045        TCGA-16-1048        TCGA-19-1390        TCGA-19-1790 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-2619        TCGA-19-2620        TCGA-19-2623        TCGA-19-2624 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-2625        TCGA-19-2629        TCGA-19-2631        TCGA-19-4068 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5947        TCGA-19-5950        TCGA-19-5951        TCGA-19-5952 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5954        TCGA-19-5955        TCGA-19-5958        TCGA-19-5959 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5960        TCGA-26-1439        TCGA-26-1442        TCGA-26-5132 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-26-5133        TCGA-26-5134        TCGA-26-5135        TCGA-26-5136 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-26-5139        TCGA-27-1830        TCGA-27-1831        TCGA-27-1832 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-1833        TCGA-27-1834        TCGA-27-1835        TCGA-27-1836 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-1837        TCGA-27-1838        TCGA-27-2518        TCGA-27-2519 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-2521        TCGA-27-2523        TCGA-27-2524        TCGA-27-2526 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-2527        TCGA-27-2528        TCGA-28-1747        TCGA-28-1753 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-2501        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5208 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCA4 MUTATED        1      0      0      0
  SMARCA4 WILD-TYPE     62     50     48     79
D99V2, multiclass
[1] "Remove cluster labels:" "SMARCA4 MUTATED"       
clus
  SMARCA4 MUTATED SMARCA4 WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6389 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-6390        TCGA-06-6391        TCGA-08-0386        TCGA-12-0616 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-0618        TCGA-12-0619        TCGA-12-0688        TCGA-12-0692 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-0821        TCGA-12-1597        TCGA-12-3649        TCGA-12-3650 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-3652        TCGA-12-3653        TCGA-12-5295        TCGA-12-5299 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-5301        TCGA-14-0781        TCGA-14-0786        TCGA-14-0787 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-0789        TCGA-14-0790        TCGA-14-0813        TCGA-14-0817 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1456        TCGA-14-1823        TCGA-14-1825 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-1829        TCGA-14-2554        TCGA-14-3476        TCGA-14-4157 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-15-0742        TCGA-15-1444        TCGA-16-0846        TCGA-16-0861 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-16-1045        TCGA-16-1048        TCGA-19-1390        TCGA-19-1790 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-2619        TCGA-19-2620        TCGA-19-2623        TCGA-19-2624 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-2625        TCGA-19-2629        TCGA-19-2631        TCGA-19-4068 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5947        TCGA-19-5950        TCGA-19-5951        TCGA-19-5952 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5954        TCGA-19-5955        TCGA-19-5958        TCGA-19-5959 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5960        TCGA-26-1439        TCGA-26-1442        TCGA-26-5132 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-26-5133        TCGA-26-5134        TCGA-26-5135        TCGA-26-5136 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-26-5139        TCGA-27-1830        TCGA-27-1831        TCGA-27-1832 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-1833        TCGA-27-1834        TCGA-27-1835        TCGA-27-1836 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-1837        TCGA-27-1838        TCGA-27-2518        TCGA-27-2519 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-2521        TCGA-27-2523        TCGA-27-2524        TCGA-27-2526 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-2527        TCGA-27-2528        TCGA-28-1747        TCGA-28-1753 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-2501        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5208 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCA4 MUTATED        0      1      0      0
  SMARCA4 WILD-TYPE     70     97     44     63
D99V3, multiclass
[1] "Remove cluster labels:" "SMARCA4 MUTATED"       
clus
  SMARCA4 MUTATED SMARCA4 WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-1806        TCGA-06-2557        TCGA-06-2558        TCGA-06-2559 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-2561        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2569        TCGA-06-2570 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5414        TCGA-06-5415        TCGA-06-5417 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5418        TCGA-06-5856        TCGA-06-5858        TCGA-06-5859 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-6388        TCGA-06-6389        TCGA-06-6390        TCGA-06-6391 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-6693        TCGA-06-6694        TCGA-06-6695        TCGA-06-6697 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-6698        TCGA-06-6699        TCGA-06-6700        TCGA-06-6701 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-08-0386        TCGA-12-0616        TCGA-12-0618        TCGA-12-0619 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-0688        TCGA-12-0692        TCGA-12-0821        TCGA-12-1597 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-3649        TCGA-12-3650        TCGA-12-3652        TCGA-12-3653 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-5295        TCGA-12-5299        TCGA-12-5301        TCGA-14-0740 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0862 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1043        TCGA-14-1395        TCGA-14-1450 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5953 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5954        TCGA-19-5955        TCGA-19-5958        TCGA-19-5959 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5960        TCGA-26-1439        TCGA-26-1442        TCGA-26-5132 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-26-5133        TCGA-26-5134        TCGA-26-5135        TCGA-26-5136 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-26-5139        TCGA-26-6173        TCGA-26-6174        TCGA-27-1830 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-1831        TCGA-27-1832        TCGA-27-1833        TCGA-27-1834 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-1835        TCGA-27-1836        TCGA-27-1837        TCGA-27-1838 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-2518        TCGA-27-2519        TCGA-27-2521        TCGA-27-2523 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-2524        TCGA-27-2526        TCGA-27-2527        TCGA-27-2528 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-1747        TCGA-28-1753        TCGA-28-2502        TCGA-28-2509 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-2510        TCGA-28-2513        TCGA-28-2514        TCGA-28-5204 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5211        TCGA-28-5213 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-5214        TCGA-28-5215        TCGA-28-5216        TCGA-28-5218 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-5219        TCGA-28-5220        TCGA-28-6450        TCGA-32-1970 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-1977        TCGA-32-1979        TCGA-32-1980        TCGA-32-1982 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-1986        TCGA-32-1991        TCGA-32-2491        TCGA-32-2494 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-2495        TCGA-32-2615        TCGA-32-2632        TCGA-32-2634 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-2638        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCA4 MUTATED        1      0      0
  SMARCA4 WILD-TYPE    137     61     76
D99V4, multiclass
[1] "Remove cluster labels:" "SMARCA4 MUTATED"       
clus
  SMARCA4 MUTATED SMARCA4 WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-1806        TCGA-06-2557        TCGA-06-2558        TCGA-06-2559 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-2561        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2569        TCGA-06-2570 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5414        TCGA-06-5415        TCGA-06-5417 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-5418        TCGA-06-5856        TCGA-06-5858        TCGA-06-5859 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-6388        TCGA-06-6389        TCGA-06-6390        TCGA-06-6391 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-6693        TCGA-06-6694        TCGA-06-6695        TCGA-06-6697 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-06-6698        TCGA-06-6699        TCGA-06-6700        TCGA-06-6701 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-08-0386        TCGA-12-0616        TCGA-12-0618        TCGA-12-0619 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-0688        TCGA-12-0692        TCGA-12-0821        TCGA-12-1597 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-3649        TCGA-12-3650        TCGA-12-3652        TCGA-12-3653 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-12-5295        TCGA-12-5299        TCGA-12-5301        TCGA-14-0740 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0862 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1043        TCGA-14-1395        TCGA-14-1450 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5953 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5954        TCGA-19-5955        TCGA-19-5958        TCGA-19-5959 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-19-5960        TCGA-26-1439        TCGA-26-1442        TCGA-26-5132 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-26-5133        TCGA-26-5134        TCGA-26-5135        TCGA-26-5136 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-26-5139        TCGA-26-6173        TCGA-26-6174        TCGA-27-1830 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-1831        TCGA-27-1832        TCGA-27-1833        TCGA-27-1834 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-1835        TCGA-27-1836        TCGA-27-1837        TCGA-27-1838 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-2518        TCGA-27-2519        TCGA-27-2521        TCGA-27-2523 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-27-2524        TCGA-27-2526        TCGA-27-2527        TCGA-27-2528 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-1747        TCGA-28-1753        TCGA-28-2502        TCGA-28-2509 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-2510        TCGA-28-2513        TCGA-28-2514        TCGA-28-5204 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5211        TCGA-28-5213 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-5214        TCGA-28-5215        TCGA-28-5216        TCGA-28-5218 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-28-5219        TCGA-28-5220        TCGA-28-6450        TCGA-32-1970 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-1977        TCGA-32-1979        TCGA-32-1980        TCGA-32-1982 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-1986        TCGA-32-1991        TCGA-32-2491        TCGA-32-2494 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-2495        TCGA-32-2615        TCGA-32-2632        TCGA-32-2634 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-2638        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"SMARCA4 WILD-TYPE" "SMARCA4 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCA4 MUTATED        3     24      0
  SMARCA4 WILD-TYPE    289    408     62
D99V5, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1               3               289
  CLUS_2              24               408
  CLUS_3               0                62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCA4 MUTATED        3     17      0      7
  SMARCA4 WILD-TYPE    150    206     88    154
D99V6, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1               3               150
  CLUS_2              17               206
  CLUS_3               0                88
  CLUS_4               7               154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCA4 MUTATED        8      6      4      1
  SMARCA4 WILD-TYPE    177    149    134     94
D99V7, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1               8               177
  CLUS_2               6               149
  CLUS_3               4               134
  CLUS_4               1                94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCA4 MUTATED        8      6      5
  SMARCA4 WILD-TYPE    197    214    143
D99V8, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1               8               197
  CLUS_2               6               214
  CLUS_3               5               143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCA4 MUTATED        4      7     16
  SMARCA4 WILD-TYPE    234    184    212
D99V9, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1               4               234
  CLUS_2               7               184
  CLUS_3              16               212
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCA4 MUTATED        2     13     12
  SMARCA4 WILD-TYPE    194    178    258
D99V10, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1               2               194
  CLUS_2              13               178
  CLUS_3              12               258
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCA4 MUTATED        8      2      6      9
  SMARCA4 WILD-TYPE    132    105     77    173
D99V11, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1               8               132
  CLUS_2               2               105
  CLUS_3               6                77
  CLUS_4               9               173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCA4 MUTATED       14      9      2
  SMARCA4 WILD-TYPE    209    177    101
D99V12, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1              14               209
  CLUS_2               9               177
  CLUS_3               2               101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCA4 MUTATED        2      6     11      6
  SMARCA4 WILD-TYPE    125    113     95    150
D99V13, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1               2               125
  CLUS_2               6               113
  CLUS_3              11                95
  CLUS_4               6               150
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  SMARCA4 MUTATED        9      2      4      2      1      7
  SMARCA4 WILD-TYPE     90     75    116     55     62     85
D99V14, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1               9                90
  CLUS_2               2                75
  CLUS_3               4               116
  CLUS_4               2                55
  CLUS_5               1                62
  CLUS_6               7                85
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(100) Variable = DOCK5 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOCK5 MUTATED        4      3      1      1
  DOCK5 WILD-TYPE     74     38     63     56
D100V1, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             4              74
  CLUS_2             3              38
  CLUS_3             1              63
  CLUS_4             1              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOCK5 MUTATED        2      2      1      4
  DOCK5 WILD-TYPE     61     48     47     75
D100V2, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             2              61
  CLUS_2             2              48
  CLUS_3             1              47
  CLUS_4             4              75
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOCK5 MUTATED        4      2      0      4
  DOCK5 WILD-TYPE     66     96     44     59
D100V3, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             4              66
  CLUS_2             2              96
  CLUS_3             0              44
  CLUS_4             4              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DOCK5 MUTATED        3      4      3
  DOCK5 WILD-TYPE    135     57     73
D100V4, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             3             135
  CLUS_2             4              57
  CLUS_3             3              73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DOCK5 MUTATED       13      5      1
  DOCK5 WILD-TYPE    279    427     61
D100V5, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1            13             279
  CLUS_2             5             427
  CLUS_3             1              61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOCK5 MUTATED        8      4      1      0
  DOCK5 WILD-TYPE    145    219     87    161
D100V6, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             8             145
  CLUS_2             4             219
  CLUS_3             1              87
  CLUS_4             0             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOCK5 MUTATED        4      1      6      3
  DOCK5 WILD-TYPE    181    154    132     92
D100V7, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             4             181
  CLUS_2             1             154
  CLUS_3             6             132
  CLUS_4             3              92
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DOCK5 MUTATED        8      5      1
  DOCK5 WILD-TYPE    197    215    147
D100V8, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             8             197
  CLUS_2             5             215
  CLUS_3             1             147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DOCK5 MUTATED       13      2      2
  DOCK5 WILD-TYPE    225    189    226
D100V9, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1            13             225
  CLUS_2             2             189
  CLUS_3             2             226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DOCK5 MUTATED       11      4      2
  DOCK5 WILD-TYPE    185    187    268
D100V10, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1            11             185
  CLUS_2             4             187
  CLUS_3             2             268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOCK5 MUTATED        2      6      0      2
  DOCK5 WILD-TYPE    138    101     83    180
D100V11, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             2             138
  CLUS_2             6             101
  CLUS_3             0              83
  CLUS_4             2             180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DOCK5 MUTATED        2      3      5
  DOCK5 WILD-TYPE    221    183     98
D100V12, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             2             221
  CLUS_2             3             183
  CLUS_3             5              98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOCK5 MUTATED        3      3      0      4
  DOCK5 WILD-TYPE    124    116    106    152
D100V13, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             3             124
  CLUS_2             3             116
  CLUS_3             0             106
  CLUS_4             4             152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DOCK5 MUTATED        1      1      1      0      3      4
  DOCK5 WILD-TYPE     98     76    119     57     60     88
D100V14, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             1              98
  CLUS_2             1              76
  CLUS_3             1             119
  CLUS_4             0              57
  CLUS_5             3              60
  CLUS_6             4              88
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(101) Variable = PAK1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAK1 MUTATED        0      0      0      0
  PAK1 WILD-TYPE     78     41     64     57
D101V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAK1 MUTATED        0      0      0      0
  PAK1 WILD-TYPE     63     50     48     79
D101V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAK1 MUTATED        1      0      0      0
  PAK1 WILD-TYPE     69     98     44     63
D101V3, multiclass
[1] "Remove cluster labels:" "PAK1 MUTATED"          
clus
  PAK1 MUTATED PAK1 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5953 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-5954     TCGA-19-5955     TCGA-19-5958     TCGA-19-5959 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1439     TCGA-26-1442     TCGA-26-5132 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-5135     TCGA-26-5136 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-26-5139     TCGA-26-6173     TCGA-26-6174     TCGA-27-1830 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1836     TCGA-27-1837     TCGA-27-1838 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-2518     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2527     TCGA-27-2528 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2502     TCGA-28-2509 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-2510     TCGA-28-2513     TCGA-28-2514     TCGA-28-5204 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5211 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-4719 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-2573 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-41-2575     TCGA-41-3392     TCGA-41-3393     TCGA-41-3915 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-41-6646     TCGA-74-6573 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-74-6575     TCGA-74-6577     TCGA-74-6578     TCGA-74-6584 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-4925     TCGA-76-4926     TCGA-76-4927     TCGA-76-4928 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-4929     TCGA-76-4931     TCGA-76-4932     TCGA-76-4934 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-4935     TCGA-76-6191     TCGA-76-6192     TCGA-76-6193 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-6280     TCGA-76-6282     TCGA-76-6283     TCGA-76-6285 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-6286     TCGA-76-6656     TCGA-76-6657     TCGA-76-6660 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-6661     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAK1 MUTATED        1      0      0
  PAK1 WILD-TYPE    137     61     76
D101V4, multiclass
[1] "Remove cluster labels:" "PAK1 MUTATED"          
clus
  PAK1 MUTATED PAK1 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5953 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-5954     TCGA-19-5955     TCGA-19-5958     TCGA-19-5959 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1439     TCGA-26-1442     TCGA-26-5132 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-5135     TCGA-26-5136 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-26-5139     TCGA-26-6173     TCGA-26-6174     TCGA-27-1830 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1836     TCGA-27-1837     TCGA-27-1838 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-2518     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2527     TCGA-27-2528 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2502     TCGA-28-2509 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-2510     TCGA-28-2513     TCGA-28-2514     TCGA-28-5204 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5211 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-4719 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-2573 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-41-2575     TCGA-41-3392     TCGA-41-3393     TCGA-41-3915 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-41-6646     TCGA-74-6573 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-74-6575     TCGA-74-6577     TCGA-74-6578     TCGA-74-6584 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-4925     TCGA-76-4926     TCGA-76-4927     TCGA-76-4928 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-4929     TCGA-76-4931     TCGA-76-4932     TCGA-76-4934 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-4935     TCGA-76-6191     TCGA-76-6192     TCGA-76-6193 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-6280     TCGA-76-6282     TCGA-76-6283     TCGA-76-6285 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-6286     TCGA-76-6656     TCGA-76-6657     TCGA-76-6660 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-6661     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAK1 MUTATED        2      1      0
  PAK1 WILD-TYPE    290    431     62
D101V5, multiclass
        clus
vv       PAK1 MUTATED PAK1 WILD-TYPE
  CLUS_1            2            290
  CLUS_2            1            431
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAK1 MUTATED        2      1      0      0
  PAK1 WILD-TYPE    151    222     88    161
D101V6, multiclass
        clus
vv       PAK1 MUTATED PAK1 WILD-TYPE
  CLUS_1            2            151
  CLUS_2            1            222
  CLUS_3            0             88
  CLUS_4            0            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAK1 MUTATED        2      0      0      1
  PAK1 WILD-TYPE    183    155    138     94
D101V7, multiclass
        clus
vv       PAK1 MUTATED PAK1 WILD-TYPE
  CLUS_1            2            183
  CLUS_2            0            155
  CLUS_3            0            138
  CLUS_4            1             94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAK1 MUTATED        2      1      0
  PAK1 WILD-TYPE    203    219    148
D101V8, multiclass
        clus
vv       PAK1 MUTATED PAK1 WILD-TYPE
  CLUS_1            2            203
  CLUS_2            1            219
  CLUS_3            0            148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAK1 MUTATED        1      0      1
  PAK1 WILD-TYPE    237    191    227
D101V9, multiclass
[1] "Remove cluster labels:" "PAK1 MUTATED"          
clus
  PAK1 MUTATED PAK1 WILD-TYPE 
             2            655 
    TCGA-02-0047     TCGA-02-0055     TCGA-02-2483     TCGA-02-2485 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-02-2486     TCGA-06-0129     TCGA-06-0130     TCGA-06-0132 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0141     TCGA-06-0157     TCGA-06-0158     TCGA-06-0168 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0174     TCGA-06-0178     TCGA-06-0184     TCGA-06-0219 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0238     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0649     TCGA-06-0686     TCGA-06-0743     TCGA-06-0744 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0745     TCGA-06-0747     TCGA-06-0749     TCGA-06-0750 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0878     TCGA-06-0882     TCGA-06-1804     TCGA-06-2557 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-08-0386     TCGA-12-0616 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0821     TCGA-12-1597 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-5299     TCGA-14-0781     TCGA-14-0787     TCGA-14-0789 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0817     TCGA-14-1823     TCGA-14-1825 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-15-0742     TCGA-15-1444 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-1045     TCGA-19-1390     TCGA-19-2619 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1834 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1837     TCGA-27-2519     TCGA-27-2521 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2528 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2499     TCGA-28-2509 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-2510     TCGA-28-2513     TCGA-28-2514     TCGA-28-5204 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5213 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5220 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1980     TCGA-32-1982     TCGA-32-2615 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4213 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-3915 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-76-4925     TCGA-76-4926 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-4932     TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-4943     TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-5394     TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6186     TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6666     TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6670     TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5275     TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5279     TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XA     TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XE     TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64L     TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64R     TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64W     TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A75M     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7011 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A74J     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6     TCGA-P5-A72U 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A736 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX     TCGA-QH-A6CY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAK1 MUTATED        0      2      0
  PAK1 WILD-TYPE    196    189    270
D101V10, multiclass
[1] "Remove cluster labels:" "PAK1 MUTATED"          
clus
  PAK1 MUTATED PAK1 WILD-TYPE 
             2            655 
    TCGA-02-0047     TCGA-02-0055     TCGA-02-2483     TCGA-02-2485 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-02-2486     TCGA-06-0129     TCGA-06-0130     TCGA-06-0132 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0141     TCGA-06-0157     TCGA-06-0158     TCGA-06-0168 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0174     TCGA-06-0178     TCGA-06-0184     TCGA-06-0219 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0238     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0649     TCGA-06-0686     TCGA-06-0743     TCGA-06-0744 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0745     TCGA-06-0747     TCGA-06-0749     TCGA-06-0750 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-0878     TCGA-06-0882     TCGA-06-1804     TCGA-06-2557 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-08-0386     TCGA-12-0616 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0821     TCGA-12-1597 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-12-5299     TCGA-14-0781     TCGA-14-0787     TCGA-14-0789 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0817     TCGA-14-1823     TCGA-14-1825 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-15-0742     TCGA-15-1444 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-1045     TCGA-19-1390     TCGA-19-2619 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1834 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1837     TCGA-27-2519     TCGA-27-2521 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2528 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2499     TCGA-28-2509 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-2510     TCGA-28-2513     TCGA-28-2514     TCGA-28-5204 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5213 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5220 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1980     TCGA-32-1982     TCGA-32-2615 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4213 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-3915 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-76-4925     TCGA-76-4926 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-76-4932     TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-4943     TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-5394     TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6186     TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6666     TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6670     TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5275     TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5279     TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XA     TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XE     TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64L     TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64R     TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64W     TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A75M     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7011 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A74J     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6     TCGA-P5-A72U 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A736 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX     TCGA-QH-A6CY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAK1 MUTATED        0      2      0      0
  PAK1 WILD-TYPE    140    105     83    182
D101V11, multiclass
[1] "Remove cluster labels:" "PAK1 MUTATED"          
clus
  PAK1 MUTATED PAK1 WILD-TYPE 
             2            510 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7T8     TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7874     TCGA-HT-7875 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6     TCGA-P5-A72U 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A736 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY     TCGA-QH-A6CZ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5     TCGA-QH-A6X8 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC     TCGA-QH-A86X 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML     TCGA-R8-A6MO 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X     TCGA-RY-A83Y 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843     TCGA-RY-A845 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU     TCGA-S9-A6TV 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY     TCGA-S9-A6TZ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2     TCGA-S9-A6U5 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9     TCGA-S9-A6UA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAK1 MUTATED        1      0      1
  PAK1 WILD-TYPE    222    186    102
D101V12, multiclass
[1] "Remove cluster labels:" "PAK1 MUTATED"          
clus
  PAK1 MUTATED PAK1 WILD-TYPE 
             2            510 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7T8     TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7874     TCGA-HT-7875 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6     TCGA-P5-A72U 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A736 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY     TCGA-QH-A6CZ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5     TCGA-QH-A6X8 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC     TCGA-QH-A86X 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML     TCGA-R8-A6MO 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X     TCGA-RY-A83Y 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843     TCGA-RY-A845 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU     TCGA-S9-A6TV 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY     TCGA-S9-A6TZ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2     TCGA-S9-A6U5 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9     TCGA-S9-A6UA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAK1 MUTATED        1      0      0      1
  PAK1 WILD-TYPE    126    119    106    155
D101V13, multiclass
[1] "Remove cluster labels:" "PAK1 MUTATED"          
clus
  PAK1 MUTATED PAK1 WILD-TYPE 
             2            506 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319     TCGA-HW-8320 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ     TCGA-HW-A5KK 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET     TCGA-P5-A5EU 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F2 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6UA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  PAK1 MUTATED        1      0      0      0      0      1
  PAK1 WILD-TYPE     98     77    120     57     63     91
D101V14, multiclass
[1] "Remove cluster labels:" "PAK1 MUTATED"          
clus
  PAK1 MUTATED PAK1 WILD-TYPE 
             2            506 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319     TCGA-HW-8320 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ     TCGA-HW-A5KK 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET     TCGA-P5-A5EU 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F2 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6UA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"PAK1 WILD-TYPE" "PAK1 WILD-TYPE" 

Clustering(102) Variable = KRT13 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT13 MUTATED        1      0      2      0
  KRT13 WILD-TYPE     77     41     62     57
D102V1, multiclass
        clus
vv       KRT13 MUTATED KRT13 WILD-TYPE
  CLUS_1             1              77
  CLUS_2             0              41
  CLUS_3             2              62
  CLUS_4             0              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT13 MUTATED        1      0      2      0
  KRT13 WILD-TYPE     62     50     46     79
D102V2, multiclass
        clus
vv       KRT13 MUTATED KRT13 WILD-TYPE
  CLUS_1             1              62
  CLUS_2             0              50
  CLUS_3             2              46
  CLUS_4             0              79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT13 MUTATED        1      1      0      1
  KRT13 WILD-TYPE     69     97     44     62
D102V3, multiclass
        clus
vv       KRT13 MUTATED KRT13 WILD-TYPE
  CLUS_1             1              69
  CLUS_2             1              97
  CLUS_3             0              44
  CLUS_4             1              62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT13 MUTATED        0      2      1
  KRT13 WILD-TYPE    138     59     75
D102V4, multiclass
        clus
vv       KRT13 MUTATED KRT13 WILD-TYPE
  CLUS_1             0             138
  CLUS_2             2              59
  CLUS_3             1              75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT13 MUTATED        4      2      0
  KRT13 WILD-TYPE    288    430     62
D102V5, multiclass
        clus
vv       KRT13 MUTATED KRT13 WILD-TYPE
  CLUS_1             4             288
  CLUS_2             2             430
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT13 MUTATED        2      2      0      0
  KRT13 WILD-TYPE    151    221     88    161
D102V6, multiclass
        clus
vv       KRT13 MUTATED KRT13 WILD-TYPE
  CLUS_1             2             151
  CLUS_2             2             221
  CLUS_3             0              88
  CLUS_4             0             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT13 MUTATED        1      0      1      0
  KRT13 WILD-TYPE    184    155    137     95
D102V7, multiclass
[1] "Remove cluster labels:" "KRT13 MUTATED"         
clus
  KRT13 MUTATED KRT13 WILD-TYPE 
              2             571 
     TCGA-02-0003      TCGA-02-2470      TCGA-02-2485      TCGA-06-0126 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-0128      TCGA-06-0129      TCGA-06-0130      TCGA-06-0154 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-0155      TCGA-06-0189      TCGA-06-0238      TCGA-06-0644 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-0650      TCGA-06-0875      TCGA-06-0876      TCGA-06-0877 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0879      TCGA-06-0882      TCGA-06-0939 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-1804      TCGA-06-1806      TCGA-06-2557      TCGA-06-2558 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-2559      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2570      TCGA-06-5408 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6388      TCGA-06-6389 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-06-6693      TCGA-06-6694 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-6695      TCGA-06-6697      TCGA-06-6698      TCGA-06-6699 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-6700      TCGA-06-6701      TCGA-08-0386      TCGA-12-0692 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5301      TCGA-14-0813 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-14-0862      TCGA-14-0871      TCGA-14-1823      TCGA-16-0846 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-6173      TCGA-26-6174      TCGA-27-1830 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-2518      TCGA-27-2528      TCGA-28-1747 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2501      TCGA-28-5208      TCGA-28-5214 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-5222      TCGA-41-2573 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-41-6646      TCGA-74-6573 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-74-6575      TCGA-74-6577      TCGA-74-6578      TCGA-74-6584 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-6192      TCGA-76-6193 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6656 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-CS-4938 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-CS-4942      TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-CS-5393      TCGA-CS-5394      TCGA-CS-5396      TCGA-CS-5397 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6665      TCGA-CS-6666 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5280 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M      TCGA-DB-A75O 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A66B      TCGA-DH-A66D 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7US      TCGA-DU-5847 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7011      TCGA-DU-7012      TCGA-DU-7013 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-7014      TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7TA      TCGA-DU-A7TB 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YH      TCGA-E1-A7YJ      TCGA-E1-A7YL 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J3 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A713 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-HT-7467      TCGA-HT-7468 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8109 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8564      TCGA-HT-A4DV      TCGA-HT-A5R5 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RB      TCGA-HT-A614 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A74H 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-A74J      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65S      TCGA-QH-A65V 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX      TCGA-QH-A6CY 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-R8-A6YH      TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-S9-A6TS      TCGA-S9-A6TU 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6U0 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-S9-A6U1      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U9 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-S9-A7IS      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7QX      TCGA-S9-A7QZ 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-S9-A7R1      TCGA-S9-A7R4      TCGA-S9-A7R8      TCGA-TM-A7C5 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RK      TCGA-TQ-A7RN      TCGA-TQ-A7RQ 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CH 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-W9-A837 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT13 MUTATED        1      1      0
  KRT13 WILD-TYPE    204    219    148
D102V8, multiclass
[1] "Remove cluster labels:" "KRT13 MUTATED"         
clus
  KRT13 MUTATED KRT13 WILD-TYPE 
              2             571 
     TCGA-02-0003      TCGA-02-2470      TCGA-02-2485      TCGA-06-0126 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-0128      TCGA-06-0129      TCGA-06-0130      TCGA-06-0154 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-0155      TCGA-06-0189      TCGA-06-0238      TCGA-06-0644 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-0650      TCGA-06-0875      TCGA-06-0876      TCGA-06-0877 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0879      TCGA-06-0882      TCGA-06-0939 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-1804      TCGA-06-1806      TCGA-06-2557      TCGA-06-2558 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-2559      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2570      TCGA-06-5408 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6388      TCGA-06-6389 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-06-6693      TCGA-06-6694 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-6695      TCGA-06-6697      TCGA-06-6698      TCGA-06-6699 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-06-6700      TCGA-06-6701      TCGA-08-0386      TCGA-12-0692 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5301      TCGA-14-0813 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-14-0862      TCGA-14-0871      TCGA-14-1823      TCGA-16-0846 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-6173      TCGA-26-6174      TCGA-27-1830 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-2518      TCGA-27-2528      TCGA-28-1747 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2501      TCGA-28-5208      TCGA-28-5214 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-5222      TCGA-41-2573 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-41-6646      TCGA-74-6573 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-74-6575      TCGA-74-6577      TCGA-74-6578      TCGA-74-6584 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-6192      TCGA-76-6193 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6656 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-CS-4938 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-CS-4942      TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-CS-5393      TCGA-CS-5394      TCGA-CS-5396      TCGA-CS-5397 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6665      TCGA-CS-6666 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5280 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M      TCGA-DB-A75O 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A66B      TCGA-DH-A66D 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7US      TCGA-DU-5847 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7011      TCGA-DU-7012      TCGA-DU-7013 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-7014      TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7TA      TCGA-DU-A7TB 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YH      TCGA-E1-A7YJ      TCGA-E1-A7YL 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J3 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A713 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-HT-7467      TCGA-HT-7468 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8109 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8564      TCGA-HT-A4DV      TCGA-HT-A5R5 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RB      TCGA-HT-A614 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A74H 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HT-A74J      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65S      TCGA-QH-A65V 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX      TCGA-QH-A6CY 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-R8-A6YH      TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-S9-A6TS      TCGA-S9-A6TU 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6U0 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-S9-A6U1      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U9 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-S9-A7IS      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7QX      TCGA-S9-A7QZ 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-S9-A7R1      TCGA-S9-A7R4      TCGA-S9-A7R8      TCGA-TM-A7C5 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RK      TCGA-TQ-A7RN      TCGA-TQ-A7RQ 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CH 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-W9-A837 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D 
"KRT13 WILD-TYPE" "KRT13 WILD-TYPE" "KRT13 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT13 MUTATED        3      1      0
  KRT13 WILD-TYPE    235    190    228
D102V9, multiclass
        clus
vv       KRT13 MUTATED KRT13 WILD-TYPE
  CLUS_1             3             235
  CLUS_2             1             190
  CLUS_3             0             228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT13 MUTATED        2      1      1
  KRT13 WILD-TYPE    194    190    269
D102V10, multiclass
        clus
vv       KRT13 MUTATED KRT13 WILD-TYPE
  CLUS_1             2             194
  CLUS_2             1             190
  CLUS_3             1             269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT13 MUTATED        0      2      0      1
  KRT13 WILD-TYPE    140    105     83    181
D102V11, multiclass
        clus
vv       KRT13 MUTATED KRT13 WILD-TYPE
  CLUS_1             0             140
  CLUS_2             2             105
  CLUS_3             0              83
  CLUS_4             1             181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT13 MUTATED        0      1      2
  KRT13 WILD-TYPE    223    185    101
D102V12, multiclass
        clus
vv       KRT13 MUTATED KRT13 WILD-TYPE
  CLUS_1             0             223
  CLUS_2             1             185
  CLUS_3             2             101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT13 MUTATED        0      2      0      1
  KRT13 WILD-TYPE    127    117    106    155
D102V13, multiclass
        clus
vv       KRT13 MUTATED KRT13 WILD-TYPE
  CLUS_1             0             127
  CLUS_2             2             117
  CLUS_3             0             106
  CLUS_4             1             155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  KRT13 MUTATED        0      1      1      0      1      0
  KRT13 WILD-TYPE     99     76    119     57     62     92
D102V14, multiclass
        clus
vv       KRT13 MUTATED KRT13 WILD-TYPE
  CLUS_1             0              99
  CLUS_2             1              76
  CLUS_3             1             119
  CLUS_4             0              57
  CLUS_5             1              62
  CLUS_6             0              92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(103) Variable = MYO5A MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO5A MUTATED        0      0      0      0
  MYO5A WILD-TYPE     78     41     64     57
D103V1, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO5A MUTATED        0      0      0      0
  MYO5A WILD-TYPE     63     50     48     79
D103V2, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO5A MUTATED        0      1      0      0
  MYO5A WILD-TYPE     70     97     44     63
D103V3, multiclass
[1] "Remove cluster labels:" "MYO5A MUTATED"         
clus
  MYO5A MUTATED MYO5A WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5132 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-5135      TCGA-26-5136 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-26-5139      TCGA-26-6173      TCGA-26-6174      TCGA-27-1830 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1836      TCGA-27-1837      TCGA-27-1838 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2527      TCGA-27-2528 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2502      TCGA-28-2509 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-28-2510      TCGA-28-2513      TCGA-28-2514      TCGA-28-5204 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5211 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-41-6646      TCGA-74-6575 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO5A MUTATED        0      0      1
  MYO5A WILD-TYPE    138     61     75
D103V4, multiclass
[1] "Remove cluster labels:" "MYO5A MUTATED"         
clus
  MYO5A MUTATED MYO5A WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5132 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-5135      TCGA-26-5136 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-26-5139      TCGA-26-6173      TCGA-26-6174      TCGA-27-1830 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1836      TCGA-27-1837      TCGA-27-1838 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2527      TCGA-27-2528 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2502      TCGA-28-2509 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-28-2510      TCGA-28-2513      TCGA-28-2514      TCGA-28-5204 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5211 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-41-6646      TCGA-74-6575 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"MYO5A WILD-TYPE" "MYO5A WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO5A MUTATED        3      1      1
  MYO5A WILD-TYPE    289    431     61
D103V5, multiclass
        clus
vv       MYO5A MUTATED MYO5A WILD-TYPE
  CLUS_1             3             289
  CLUS_2             1             431
  CLUS_3             1              61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO5A MUTATED        4      0      0      1
  MYO5A WILD-TYPE    149    223     88    160
D103V6, multiclass
        clus
vv       MYO5A MUTATED MYO5A WILD-TYPE
  CLUS_1             4             149
  CLUS_2             0             223
  CLUS_3             0              88
  CLUS_4             1             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO5A MUTATED        3      0      1      1
  MYO5A WILD-TYPE    182    155    137     94
D103V7, multiclass
        clus
vv       MYO5A MUTATED MYO5A WILD-TYPE
  CLUS_1             3             182
  CLUS_2             0             155
  CLUS_3             1             137
  CLUS_4             1              94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO5A MUTATED        4      1      0
  MYO5A WILD-TYPE    201    219    148
D103V8, multiclass
        clus
vv       MYO5A MUTATED MYO5A WILD-TYPE
  CLUS_1             4             201
  CLUS_2             1             219
  CLUS_3             0             148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO5A MUTATED        3      1      0
  MYO5A WILD-TYPE    235    190    228
D103V9, multiclass
        clus
vv       MYO5A MUTATED MYO5A WILD-TYPE
  CLUS_1             3             235
  CLUS_2             1             190
  CLUS_3             0             228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO5A MUTATED        2      1      1
  MYO5A WILD-TYPE    194    190    269
D103V10, multiclass
        clus
vv       MYO5A MUTATED MYO5A WILD-TYPE
  CLUS_1             2             194
  CLUS_2             1             190
  CLUS_3             1             269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO5A MUTATED        2      1      0      1
  MYO5A WILD-TYPE    138    106     83    181
D103V11, multiclass
        clus
vv       MYO5A MUTATED MYO5A WILD-TYPE
  CLUS_1             2             138
  CLUS_2             1             106
  CLUS_3             0              83
  CLUS_4             1             181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO5A MUTATED        1      1      2
  MYO5A WILD-TYPE    222    185    101
D103V12, multiclass
        clus
vv       MYO5A MUTATED MYO5A WILD-TYPE
  CLUS_1             1             222
  CLUS_2             1             185
  CLUS_3             2             101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO5A MUTATED        2      0      0      2
  MYO5A WILD-TYPE    125    119    106    154
D103V13, multiclass
        clus
vv       MYO5A MUTATED MYO5A WILD-TYPE
  CLUS_1             2             125
  CLUS_2             0             119
  CLUS_3             0             106
  CLUS_4             2             154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  MYO5A MUTATED        1      0      0      0      1      2
  MYO5A WILD-TYPE     98     77    120     57     62     90
D103V14, multiclass
        clus
vv       MYO5A MUTATED MYO5A WILD-TYPE
  CLUS_1             1              98
  CLUS_2             0              77
  CLUS_3             0             120
  CLUS_4             0              57
  CLUS_5             1              62
  CLUS_6             2              90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(104) Variable = MORN5 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MORN5 MUTATED        0      0      1      0
  MORN5 WILD-TYPE     78     41     63     57
D104V1, multiclass
[1] "Remove cluster labels:" "MORN5 MUTATED"         
clus
  MORN5 MUTATED MORN5 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2629      TCGA-19-2631      TCGA-19-4068 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5132 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-5135      TCGA-26-5136 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-5139      TCGA-27-1830      TCGA-27-1831      TCGA-27-1832 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1833      TCGA-27-1834      TCGA-27-1835      TCGA-27-1836 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1837      TCGA-27-1838      TCGA-27-2518      TCGA-27-2519 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-2521      TCGA-27-2523      TCGA-27-2524      TCGA-27-2526 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-2527      TCGA-27-2528      TCGA-28-1747      TCGA-28-1753 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-2501      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5213      TCGA-28-5214 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5219 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5220      TCGA-28-6450      TCGA-32-1970      TCGA-32-1977 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3393 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MORN5 MUTATED        0      0      0      1
  MORN5 WILD-TYPE     63     50     48     78
D104V2, multiclass
[1] "Remove cluster labels:" "MORN5 MUTATED"         
clus
  MORN5 MUTATED MORN5 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2629      TCGA-19-2631      TCGA-19-4068 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5132 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-5135      TCGA-26-5136 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-5139      TCGA-27-1830      TCGA-27-1831      TCGA-27-1832 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1833      TCGA-27-1834      TCGA-27-1835      TCGA-27-1836 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1837      TCGA-27-1838      TCGA-27-2518      TCGA-27-2519 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-2521      TCGA-27-2523      TCGA-27-2524      TCGA-27-2526 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-2527      TCGA-27-2528      TCGA-28-1747      TCGA-28-1753 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-2501      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5213      TCGA-28-5214 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5219 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5220      TCGA-28-6450      TCGA-32-1970      TCGA-32-1977 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-1982      TCGA-32-1986 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-2491      TCGA-32-2494      TCGA-32-2495 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-2615      TCGA-32-2632      TCGA-32-2634      TCGA-32-2638 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-4208      TCGA-32-4209      TCGA-32-4210      TCGA-32-4211 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-4213      TCGA-32-4719      TCGA-32-5222      TCGA-41-2571 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-41-2572      TCGA-41-2573      TCGA-41-2575      TCGA-41-3393 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MORN5 MUTATED        0      0      1      0
  MORN5 WILD-TYPE     70     98     43     63
D104V3, multiclass
[1] "Remove cluster labels:" "MORN5 MUTATED"         
clus
  MORN5 MUTATED MORN5 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5132 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-5135      TCGA-26-5136 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-5139      TCGA-26-6173      TCGA-26-6174      TCGA-27-1830 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1836      TCGA-27-1837      TCGA-27-1838 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2527      TCGA-27-2528 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2502      TCGA-28-2509 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-2510      TCGA-28-2513      TCGA-28-2514      TCGA-28-5204 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5211 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MORN5 MUTATED        1      0      0
  MORN5 WILD-TYPE    137     61     76
D104V4, multiclass
[1] "Remove cluster labels:" "MORN5 MUTATED"         
clus
  MORN5 MUTATED MORN5 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5132 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-5135      TCGA-26-5136 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-5139      TCGA-26-6173      TCGA-26-6174      TCGA-27-1830 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1836      TCGA-27-1837      TCGA-27-1838 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2527      TCGA-27-2528 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2502      TCGA-28-2509 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-2510      TCGA-28-2513      TCGA-28-2514      TCGA-28-5204 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5211 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1977      TCGA-32-1979      TCGA-32-1980 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-1982      TCGA-32-1986      TCGA-32-1991      TCGA-32-2491 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MORN5 MUTATED        2      1      0
  MORN5 WILD-TYPE    290    431     62
D104V5, multiclass
        clus
vv       MORN5 MUTATED MORN5 WILD-TYPE
  CLUS_1             2             290
  CLUS_2             1             431
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MORN5 MUTATED        0      0      1      1
  MORN5 WILD-TYPE    153    223     87    160
D104V6, multiclass
[1] "Remove cluster labels:" "MORN5 MUTATED"         
clus
  MORN5 MUTATED MORN5 WILD-TYPE 
              2             623 
     TCGA-06-0152      TCGA-06-0650      TCGA-06-1804      TCGA-06-1806 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0862      TCGA-14-1043      TCGA-14-1395 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-1450      TCGA-15-1444      TCGA-19-5947      TCGA-19-5950 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5133      TCGA-26-5134 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-26-6173 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-6174      TCGA-28-2501      TCGA-28-2510      TCGA-28-5204 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5211 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5213      TCGA-28-5214      TCGA-28-5215      TCGA-28-5216 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5218      TCGA-28-5219      TCGA-28-5220      TCGA-28-6450 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-1979      TCGA-32-1980      TCGA-32-5222      TCGA-41-5651 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-87-5896      TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-5394      TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6666      TCGA-CS-6667      TCGA-CS-6669      TCGA-CS-6670 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014      TCGA-DU-7015 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YN 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A74J      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6      TCGA-P5-A72U 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A736 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX      TCGA-QH-A6CY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MORN5 MUTATED        0      1      1      1
  MORN5 WILD-TYPE    185    154    137     94
D104V7, multiclass
        clus
vv       MORN5 MUTATED MORN5 WILD-TYPE
  CLUS_1             0             185
  CLUS_2             1             154
  CLUS_3             1             137
  CLUS_4             1              94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MORN5 MUTATED        0      2      1
  MORN5 WILD-TYPE    205    218    147
D104V8, multiclass
        clus
vv       MORN5 MUTATED MORN5 WILD-TYPE
  CLUS_1             0             205
  CLUS_2             2             218
  CLUS_3             1             147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MORN5 MUTATED        0      1      1
  MORN5 WILD-TYPE    238    190    227
D104V9, multiclass
[1] "Remove cluster labels:" "MORN5 MUTATED"         
clus
  MORN5 MUTATED MORN5 WILD-TYPE 
              2             655 
     TCGA-02-0047      TCGA-02-0055      TCGA-02-2483      TCGA-02-2485 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-02-2486      TCGA-06-0129      TCGA-06-0130      TCGA-06-0132 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0157      TCGA-06-0158      TCGA-06-0168 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0174      TCGA-06-0178      TCGA-06-0184      TCGA-06-0219 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0238      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0649      TCGA-06-0686      TCGA-06-0743      TCGA-06-0744 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0745      TCGA-06-0747      TCGA-06-0749      TCGA-06-0750 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0882      TCGA-06-1804      TCGA-06-2557 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-08-0386      TCGA-12-0616 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0821      TCGA-12-1597 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-5299      TCGA-14-0781      TCGA-14-0787      TCGA-14-0789 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0817      TCGA-14-1823      TCGA-14-1825 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-15-0742      TCGA-15-1444 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-1045      TCGA-19-1390      TCGA-19-2619 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1834 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1837      TCGA-27-2519      TCGA-27-2521 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2528 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2499      TCGA-28-2509 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-2510      TCGA-28-2513      TCGA-28-2514      TCGA-28-5204 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5213 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5220 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1980      TCGA-32-1982      TCGA-32-2615 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4213 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-3915 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4932      TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-5394      TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6666      TCGA-CS-6667      TCGA-CS-6669      TCGA-CS-6670 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014      TCGA-DU-7015 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YN 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A74J      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6      TCGA-P5-A72U 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A736 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX      TCGA-QH-A6CY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MORN5 MUTATED        0      0      2
  MORN5 WILD-TYPE    196    191    268
D104V10, multiclass
[1] "Remove cluster labels:" "MORN5 MUTATED"         
clus
  MORN5 MUTATED MORN5 WILD-TYPE 
              2             655 
     TCGA-02-0047      TCGA-02-0055      TCGA-02-2483      TCGA-02-2485 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-02-2486      TCGA-06-0129      TCGA-06-0130      TCGA-06-0132 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0157      TCGA-06-0158      TCGA-06-0168 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0174      TCGA-06-0178      TCGA-06-0184      TCGA-06-0219 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0238      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0649      TCGA-06-0686      TCGA-06-0743      TCGA-06-0744 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0745      TCGA-06-0747      TCGA-06-0749      TCGA-06-0750 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0882      TCGA-06-1804      TCGA-06-2557 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-08-0386      TCGA-12-0616 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0821      TCGA-12-1597 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-12-5299      TCGA-14-0781      TCGA-14-0787      TCGA-14-0789 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0817      TCGA-14-1823      TCGA-14-1825 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-15-0742      TCGA-15-1444 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-1045      TCGA-19-1390      TCGA-19-2619 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1834 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1837      TCGA-27-2519      TCGA-27-2521 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2528 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2499      TCGA-28-2509 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-2510      TCGA-28-2513      TCGA-28-2514      TCGA-28-5204 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5213 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5220 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1980      TCGA-32-1982      TCGA-32-2615 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4213 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-3915 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-76-4932      TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-5394      TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6666      TCGA-CS-6667      TCGA-CS-6669      TCGA-CS-6670 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014      TCGA-DU-7015 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YN 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A74J      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6      TCGA-P5-A72U 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A736 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX      TCGA-QH-A6CY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MORN5 MUTATED        0      0      1      1
  MORN5 WILD-TYPE    140    107     82    181
D104V11, multiclass
[1] "Remove cluster labels:" "MORN5 MUTATED"         
clus
  MORN5 MUTATED MORN5 WILD-TYPE 
              2             510 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5280 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6      TCGA-P5-A72U 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A736 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY      TCGA-QH-A6CZ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X      TCGA-RY-A83Y 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843      TCGA-RY-A845 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU      TCGA-S9-A6TV 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6TZ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2      TCGA-S9-A6U5 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9      TCGA-S9-A6UA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4      TCGA-TM-A7C5 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B      TCGA-TM-A84C 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H      TCGA-TM-A84I 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M      TCGA-TM-A84O 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TM-A84T 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH      TCGA-TQ-A7RI 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM      TCGA-TQ-A7RN 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ      TCGA-TQ-A7RR 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CF 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K      TCGA-WY-A858 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B      TCGA-WY-A85C 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A85D      TCGA-WY-A85E 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MORN5 MUTATED        1      1      0
  MORN5 WILD-TYPE    222    185    103
D104V12, multiclass
[1] "Remove cluster labels:" "MORN5 MUTATED"         
clus
  MORN5 MUTATED MORN5 WILD-TYPE 
              2             510 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5280 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6      TCGA-P5-A72U 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A736 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY      TCGA-QH-A6CZ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X      TCGA-RY-A83Y 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843      TCGA-RY-A845 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU      TCGA-S9-A6TV 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6TZ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2      TCGA-S9-A6U5 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9      TCGA-S9-A6UA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4      TCGA-TM-A7C5 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B      TCGA-TM-A84C 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H      TCGA-TM-A84I 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M      TCGA-TM-A84O 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TM-A84T 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH      TCGA-TQ-A7RI 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM      TCGA-TQ-A7RN 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ      TCGA-TQ-A7RR 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CF 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K      TCGA-WY-A858 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B      TCGA-WY-A85C 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A85D      TCGA-WY-A85E 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MORN5 MUTATED        0      0      1      1
  MORN5 WILD-TYPE    127    119    105    155
D104V13, multiclass
[1] "Remove cluster labels:" "MORN5 MUTATED"         
clus
  MORN5 MUTATED MORN5 WILD-TYPE 
              2             506 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5281 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB      TCGA-DB-A4XC 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF      TCGA-DB-A4XG 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O      TCGA-DB-A64P 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S      TCGA-DB-A64U 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X      TCGA-DB-A75K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014      TCGA-DU-7015 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YN 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6UA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4      TCGA-TM-A7C5 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B      TCGA-TM-A84C 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H      TCGA-TM-A84I 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M      TCGA-TM-A84O 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TM-A84T 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH      TCGA-TQ-A7RI 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM      TCGA-TQ-A7RN 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ      TCGA-TQ-A7RR 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CF 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K      TCGA-WY-A858 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B      TCGA-WY-A85C 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A85D      TCGA-WY-A85E 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  MORN5 MUTATED        0      0      1      1      0      0
  MORN5 WILD-TYPE     99     77    119     56     63     92
D104V14, multiclass
[1] "Remove cluster labels:" "MORN5 MUTATED"         
clus
  MORN5 MUTATED MORN5 WILD-TYPE 
              2             506 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5281 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB      TCGA-DB-A4XC 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF      TCGA-DB-A4XG 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O      TCGA-DB-A64P 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S      TCGA-DB-A64U 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X      TCGA-DB-A75K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014      TCGA-DU-7015 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YN 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6UA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4      TCGA-TM-A7C5 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B      TCGA-TM-A84C 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H      TCGA-TM-A84I 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M      TCGA-TM-A84O 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TM-A84T 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH      TCGA-TQ-A7RI 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM      TCGA-TQ-A7RN 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ      TCGA-TQ-A7RR 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CF 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K      TCGA-WY-A858 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B      TCGA-WY-A85C 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 
     TCGA-WY-A85D      TCGA-WY-A85E 
"MORN5 WILD-TYPE" "MORN5 WILD-TYPE" 

Clustering(105) Variable = KRT3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT3 MUTATED        0      0      0      0
  KRT3 WILD-TYPE     78     41     64     57
D105V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT3 MUTATED        0      0      0      0
  KRT3 WILD-TYPE     63     50     48     79
D105V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT3 MUTATED        0      0      0      0
  KRT3 WILD-TYPE     70     98     44     63
D105V3, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KRT3 MUTATED        0      0      0
  KRT3 WILD-TYPE    138     61     76
D105V4, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KRT3 MUTATED        1      3      0
  KRT3 WILD-TYPE    291    429     62
D105V5, multiclass
        clus
vv       KRT3 MUTATED KRT3 WILD-TYPE
  CLUS_1            1            291
  CLUS_2            3            429
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT3 MUTATED        1      2      0      1
  KRT3 WILD-TYPE    152    221     88    160
D105V6, multiclass
        clus
vv       KRT3 MUTATED KRT3 WILD-TYPE
  CLUS_1            1            152
  CLUS_2            2            221
  CLUS_3            0             88
  CLUS_4            1            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT3 MUTATED        2      0      0      1
  KRT3 WILD-TYPE    183    155    138     94
D105V7, multiclass
        clus
vv       KRT3 MUTATED KRT3 WILD-TYPE
  CLUS_1            2            183
  CLUS_2            0            155
  CLUS_3            0            138
  CLUS_4            1             94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KRT3 MUTATED        2      1      0
  KRT3 WILD-TYPE    203    219    148
D105V8, multiclass
        clus
vv       KRT3 MUTATED KRT3 WILD-TYPE
  CLUS_1            2            203
  CLUS_2            1            219
  CLUS_3            0            148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KRT3 MUTATED        1      0      3
  KRT3 WILD-TYPE    237    191    225
D105V9, multiclass
        clus
vv       KRT3 MUTATED KRT3 WILD-TYPE
  CLUS_1            1            237
  CLUS_2            0            191
  CLUS_3            3            225
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KRT3 MUTATED        1      2      1
  KRT3 WILD-TYPE    195    189    269
D105V10, multiclass
        clus
vv       KRT3 MUTATED KRT3 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            2            189
  CLUS_3            1            269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT3 MUTATED        2      1      1      0
  KRT3 WILD-TYPE    138    106     82    182
D105V11, multiclass
        clus
vv       KRT3 MUTATED KRT3 WILD-TYPE
  CLUS_1            2            138
  CLUS_2            1            106
  CLUS_3            1             82
  CLUS_4            0            182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KRT3 MUTATED        2      0      2
  KRT3 WILD-TYPE    221    186    101
D105V12, multiclass
        clus
vv       KRT3 MUTATED KRT3 WILD-TYPE
  CLUS_1            2            221
  CLUS_2            0            186
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT3 MUTATED        3      1      0      0
  KRT3 WILD-TYPE    124    118    106    156
D105V13, multiclass
        clus
vv       KRT3 MUTATED KRT3 WILD-TYPE
  CLUS_1            3            124
  CLUS_2            1            118
  CLUS_3            0            106
  CLUS_4            0            156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  KRT3 MUTATED        2      0      0      0      1      1
  KRT3 WILD-TYPE     97     77    120     57     62     91
D105V14, multiclass
        clus
vv       KRT3 MUTATED KRT3 WILD-TYPE
  CLUS_1            2             97
  CLUS_2            0             77
  CLUS_3            0            120
  CLUS_4            0             57
  CLUS_5            1             62
  CLUS_6            1             91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(106) Variable = LGALS13 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LGALS13 MUTATED        0      0      0      1
  LGALS13 WILD-TYPE     78     41     64     56
D106V1, multiclass
[1] "Remove cluster labels:" "LGALS13 MUTATED"       
clus
  LGALS13 MUTATED LGALS13 WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0649        TCGA-06-0650        TCGA-06-0686 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0743        TCGA-06-0744        TCGA-06-0745        TCGA-06-0747 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-2557 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-2558        TCGA-06-2559        TCGA-06-2561        TCGA-06-2562 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-2563        TCGA-06-2564        TCGA-06-2565        TCGA-06-2567 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-2569        TCGA-06-2570        TCGA-06-5408        TCGA-06-5410 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-5411        TCGA-06-5412        TCGA-06-5413        TCGA-06-5414 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-5415        TCGA-06-5417        TCGA-06-5418        TCGA-06-5856 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-5858        TCGA-06-5859        TCGA-06-6389        TCGA-06-6390 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-6391        TCGA-08-0386        TCGA-12-0616        TCGA-12-0618 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-12-0619        TCGA-12-0688        TCGA-12-0692        TCGA-12-0821 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-12-1597        TCGA-12-3649        TCGA-12-3650        TCGA-12-3652 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-12-3653        TCGA-12-5295        TCGA-12-5299        TCGA-12-5301 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0871 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5954 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1835        TCGA-27-1836        TCGA-27-1837 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-27-1838        TCGA-27-2518        TCGA-27-2519        TCGA-27-2521 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2527 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-27-2528        TCGA-28-1747        TCGA-28-1753        TCGA-28-2501 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LGALS13 MUTATED        0      1      0      0
  LGALS13 WILD-TYPE     63     49     48     79
D106V2, multiclass
[1] "Remove cluster labels:" "LGALS13 MUTATED"       
clus
  LGALS13 MUTATED LGALS13 WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0649        TCGA-06-0650        TCGA-06-0686 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0743        TCGA-06-0744        TCGA-06-0745        TCGA-06-0747 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-2557 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-2558        TCGA-06-2559        TCGA-06-2561        TCGA-06-2562 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-2563        TCGA-06-2564        TCGA-06-2565        TCGA-06-2567 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-2569        TCGA-06-2570        TCGA-06-5408        TCGA-06-5410 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-5411        TCGA-06-5412        TCGA-06-5413        TCGA-06-5414 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-5415        TCGA-06-5417        TCGA-06-5418        TCGA-06-5856 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-5858        TCGA-06-5859        TCGA-06-6389        TCGA-06-6390 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-6391        TCGA-08-0386        TCGA-12-0616        TCGA-12-0618 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-12-0619        TCGA-12-0688        TCGA-12-0692        TCGA-12-0821 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-12-1597        TCGA-12-3649        TCGA-12-3650        TCGA-12-3652 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-12-3653        TCGA-12-5295        TCGA-12-5299        TCGA-12-5301 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0871 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5954 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1835        TCGA-27-1836        TCGA-27-1837 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-27-1838        TCGA-27-2518        TCGA-27-2519        TCGA-27-2521 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2527 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-27-2528        TCGA-28-1747        TCGA-28-1753        TCGA-28-2501 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LGALS13 MUTATED        0      1      0      0
  LGALS13 WILD-TYPE     70     97     44     63
D106V3, multiclass
[1] "Remove cluster labels:" "LGALS13 MUTATED"       
clus
  LGALS13 MUTATED LGALS13 WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0649        TCGA-06-0650        TCGA-06-0686 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0743        TCGA-06-0744        TCGA-06-0745        TCGA-06-0747 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-1806 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-12-0616        TCGA-12-0618        TCGA-12-0619        TCGA-12-0688 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-12-0692        TCGA-12-0821        TCGA-12-1597        TCGA-12-3649 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-12-3650        TCGA-12-3652        TCGA-12-3653        TCGA-12-5295 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-12-5299        TCGA-12-5301        TCGA-14-0740        TCGA-14-0781 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-14-0786        TCGA-14-0787        TCGA-14-0789        TCGA-14-0790 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0817        TCGA-14-0862        TCGA-14-0871 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-14-1043        TCGA-14-1395        TCGA-14-1450        TCGA-14-1456 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-14-1823        TCGA-14-1825        TCGA-14-1829        TCGA-14-2554 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-14-3476        TCGA-14-4157        TCGA-15-0742        TCGA-15-1444 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-16-0846        TCGA-16-0861        TCGA-16-1045        TCGA-16-1048 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-1390        TCGA-19-1790        TCGA-19-2619        TCGA-19-2620 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-2623        TCGA-19-2624        TCGA-19-2625        TCGA-19-2629 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-2631        TCGA-19-4068        TCGA-19-5947        TCGA-19-5950 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1830        TCGA-27-1831 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-27-1832        TCGA-27-1833        TCGA-27-1834        TCGA-27-1835 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-27-1836        TCGA-27-1837        TCGA-27-1838        TCGA-27-2518 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-27-2519        TCGA-27-2521        TCGA-27-2523        TCGA-27-2524 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-27-2526        TCGA-27-2527        TCGA-27-2528        TCGA-28-1747 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-1753        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5207 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5211        TCGA-28-5213 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-5214        TCGA-28-5215        TCGA-28-5216        TCGA-28-5218 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-5219        TCGA-28-5220        TCGA-28-6450        TCGA-32-1970 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-32-1977        TCGA-32-1979        TCGA-32-1980        TCGA-32-1982 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-32-1986        TCGA-32-1991        TCGA-32-2491        TCGA-32-2494 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-32-2495        TCGA-32-2615        TCGA-32-2632        TCGA-32-2634 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-32-2638        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  LGALS13 MUTATED        1      0      0
  LGALS13 WILD-TYPE    137     61     76
D106V4, multiclass
[1] "Remove cluster labels:" "LGALS13 MUTATED"       
clus
  LGALS13 MUTATED LGALS13 WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0649        TCGA-06-0650        TCGA-06-0686 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0743        TCGA-06-0744        TCGA-06-0745        TCGA-06-0747 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-1806 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-12-0616        TCGA-12-0618        TCGA-12-0619        TCGA-12-0688 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-12-0692        TCGA-12-0821        TCGA-12-1597        TCGA-12-3649 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-12-3650        TCGA-12-3652        TCGA-12-3653        TCGA-12-5295 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-12-5299        TCGA-12-5301        TCGA-14-0740        TCGA-14-0781 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-14-0786        TCGA-14-0787        TCGA-14-0789        TCGA-14-0790 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0817        TCGA-14-0862        TCGA-14-0871 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-14-1043        TCGA-14-1395        TCGA-14-1450        TCGA-14-1456 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-14-1823        TCGA-14-1825        TCGA-14-1829        TCGA-14-2554 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-14-3476        TCGA-14-4157        TCGA-15-0742        TCGA-15-1444 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-16-0846        TCGA-16-0861        TCGA-16-1045        TCGA-16-1048 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-1390        TCGA-19-1790        TCGA-19-2619        TCGA-19-2620 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-2623        TCGA-19-2624        TCGA-19-2625        TCGA-19-2629 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-2631        TCGA-19-4068        TCGA-19-5947        TCGA-19-5950 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1830        TCGA-27-1831 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-27-1832        TCGA-27-1833        TCGA-27-1834        TCGA-27-1835 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-27-1836        TCGA-27-1837        TCGA-27-1838        TCGA-27-2518 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-27-2519        TCGA-27-2521        TCGA-27-2523        TCGA-27-2524 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-27-2526        TCGA-27-2527        TCGA-27-2528        TCGA-28-1747 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-1753        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5207 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5211        TCGA-28-5213 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-5214        TCGA-28-5215        TCGA-28-5216        TCGA-28-5218 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-5219        TCGA-28-5220        TCGA-28-6450        TCGA-32-1970 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-32-1977        TCGA-32-1979        TCGA-32-1980        TCGA-32-1982 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-32-1986        TCGA-32-1991        TCGA-32-2491        TCGA-32-2494 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-32-2495        TCGA-32-2615        TCGA-32-2632        TCGA-32-2634 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-32-2638        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  LGALS13 MUTATED        1      2      1
  LGALS13 WILD-TYPE    291    430     61
D106V5, multiclass
        clus
vv       LGALS13 MUTATED LGALS13 WILD-TYPE
  CLUS_1               1               291
  CLUS_2               2               430
  CLUS_3               1                61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LGALS13 MUTATED        0      0      2      1
  LGALS13 WILD-TYPE    153    223     86    160
D106V6, multiclass
        clus
vv       LGALS13 MUTATED LGALS13 WILD-TYPE
  CLUS_1               0               153
  CLUS_2               0               223
  CLUS_3               2                86
  CLUS_4               1               160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LGALS13 MUTATED        0      0      1      1
  LGALS13 WILD-TYPE    185    155    137     94
D106V7, multiclass
[1] "Remove cluster labels:" "LGALS13 MUTATED"       
clus
  LGALS13 MUTATED LGALS13 WILD-TYPE 
                2               571 
       TCGA-02-0003        TCGA-02-2470        TCGA-02-2485        TCGA-06-0126 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0128        TCGA-06-0129        TCGA-06-0130        TCGA-06-0154 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0155        TCGA-06-0189        TCGA-06-0238        TCGA-06-0644 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0650        TCGA-06-0875        TCGA-06-0876        TCGA-06-0877 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0878        TCGA-06-0879        TCGA-06-0882        TCGA-06-0939 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-1804        TCGA-06-1806        TCGA-06-2557        TCGA-06-2558 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-2559        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2570        TCGA-06-5408 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-12-0692        TCGA-12-1597        TCGA-12-3649        TCGA-12-3650 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-12-3652        TCGA-12-3653        TCGA-12-5295        TCGA-12-5301 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0862        TCGA-14-0871        TCGA-14-1823 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-16-0846        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2625        TCGA-19-2631        TCGA-19-4068 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-5947        TCGA-19-5950        TCGA-19-5951        TCGA-19-5952 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-5953        TCGA-19-5954        TCGA-19-5955        TCGA-19-5958 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-5959        TCGA-19-5960        TCGA-26-1442        TCGA-26-5132 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-26-5133        TCGA-26-5134        TCGA-26-6173        TCGA-26-6174 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1836        TCGA-27-2518        TCGA-27-2528 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-1747        TCGA-28-1753        TCGA-28-2501        TCGA-28-5208 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-5214        TCGA-32-1970        TCGA-32-1982        TCGA-32-1986 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-32-1991        TCGA-32-4210        TCGA-32-4211        TCGA-32-5222 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-41-6646 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-74-6573        TCGA-74-6575        TCGA-74-6577        TCGA-74-6578 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-74-6584        TCGA-76-4926        TCGA-76-4927        TCGA-76-4928 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-4929        TCGA-76-4931        TCGA-76-4932        TCGA-76-6192 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-6193        TCGA-76-6282        TCGA-76-6283        TCGA-76-6285 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-CS-4938        TCGA-CS-4942        TCGA-CS-4943        TCGA-CS-4944 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-CS-5390        TCGA-CS-5393        TCGA-CS-5394        TCGA-CS-5396 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-CS-5397        TCGA-CS-6186        TCGA-CS-6188        TCGA-CS-6665 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-CS-6666        TCGA-CS-6668        TCGA-CS-6669        TCGA-CS-6670 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274        TCGA-DB-5275 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DB-5277        TCGA-DB-5278        TCGA-DB-5279        TCGA-DB-5280 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DB-5281        TCGA-DB-A4X9        TCGA-DB-A4XA        TCGA-DB-A4XB 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DB-A4XC        TCGA-DB-A4XD        TCGA-DB-A4XE        TCGA-DB-A4XF 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DB-A4XG        TCGA-DB-A4XH        TCGA-DB-A64L        TCGA-DB-A64O 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DB-A64P        TCGA-DB-A64Q        TCGA-DB-A64R        TCGA-DB-A64S 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DB-A64U        TCGA-DB-A64V        TCGA-DB-A64W        TCGA-DB-A64X 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DB-A75K        TCGA-DB-A75L        TCGA-DB-A75M        TCGA-DB-A75O 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DB-A75P        TCGA-DH-5140        TCGA-DH-5141        TCGA-DH-5142 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DH-5143        TCGA-DH-5144        TCGA-DH-A66B        TCGA-DH-A66D 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DH-A66F        TCGA-DH-A66G        TCGA-DH-A7US        TCGA-DU-5847 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-5849        TCGA-DU-5851        TCGA-DU-5852        TCGA-DU-5853 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-5854        TCGA-DU-5855        TCGA-DU-5870        TCGA-DU-5871 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-5872        TCGA-DU-5874        TCGA-DU-6392        TCGA-DU-6393 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-6394        TCGA-DU-6395        TCGA-DU-6396        TCGA-DU-6397 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-6399        TCGA-DU-6400        TCGA-DU-6401        TCGA-DU-6402 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-6403        TCGA-DU-6404        TCGA-DU-6405        TCGA-DU-6406 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-6407        TCGA-DU-6408        TCGA-DU-6410        TCGA-DU-6542 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-7006        TCGA-DU-7007        TCGA-DU-7008        TCGA-DU-7009 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-7010        TCGA-DU-7011        TCGA-DU-7012        TCGA-DU-7013 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-7014        TCGA-DU-7015        TCGA-DU-7018        TCGA-DU-7019 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-7290        TCGA-DU-7292        TCGA-DU-7294        TCGA-DU-7298 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-7300        TCGA-DU-7301        TCGA-DU-7302        TCGA-DU-7304 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-7306        TCGA-DU-7309        TCGA-DU-8158        TCGA-DU-8161 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-8162        TCGA-DU-8163        TCGA-DU-8164        TCGA-DU-8165 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-8166        TCGA-DU-8167        TCGA-DU-8168        TCGA-DU-A5TP 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-A5TR        TCGA-DU-A5TS        TCGA-DU-A5TT        TCGA-DU-A5TU 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-A5TW        TCGA-DU-A5TY        TCGA-DU-A6S2        TCGA-DU-A6S3 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L        TCGA-DU-A76O 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7TA        TCGA-DU-A7TB 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-A7TD        TCGA-DU-A7TG        TCGA-DU-A7TI        TCGA-DU-A7TJ 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-E1-5302        TCGA-E1-5303        TCGA-E1-5304        TCGA-E1-5305 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-E1-5307        TCGA-E1-5311        TCGA-E1-5318        TCGA-E1-5322 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-E1-A7YH        TCGA-E1-A7YI        TCGA-E1-A7YJ        TCGA-E1-A7YL 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-E1-A7YM        TCGA-E1-A7YN        TCGA-E1-A7YQ        TCGA-E1-A7YS 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-E1-A7YV        TCGA-E1-A7YW        TCGA-E1-A7YY        TCGA-E1-A7Z2 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-E1-A7Z3        TCGA-E1-A7Z6        TCGA-EZ-7264        TCGA-F6-A8O3 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-F6-A8O4        TCGA-FG-5962        TCGA-FG-5963        TCGA-FG-5964 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-FG-5965        TCGA-FG-6688        TCGA-FG-6689        TCGA-FG-6690 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-FG-6691        TCGA-FG-7634        TCGA-FG-7636        TCGA-FG-7637 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-FG-7638        TCGA-FG-7641        TCGA-FG-7643        TCGA-FG-8181 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-FG-8182        TCGA-FG-8185        TCGA-FG-8186        TCGA-FG-8187 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-FG-8188        TCGA-FG-8189        TCGA-FG-8191        TCGA-FG-A4MT 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-FG-A4MU        TCGA-FG-A4MW        TCGA-FG-A4MX        TCGA-FG-A4MY 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-FG-A60J        TCGA-FG-A60L        TCGA-FG-A6IZ        TCGA-FG-A6J3 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-FG-A70Y        TCGA-FG-A70Z        TCGA-FG-A710        TCGA-FG-A713 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-FG-A87N        TCGA-FG-A87Q        TCGA-HT-7467        TCGA-HT-7468 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7469        TCGA-HT-7470        TCGA-HT-7471        TCGA-HT-7472 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7473        TCGA-HT-7474        TCGA-HT-7475        TCGA-HT-7476 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7477        TCGA-HT-7478        TCGA-HT-7479        TCGA-HT-7480 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7481        TCGA-HT-7482        TCGA-HT-7483        TCGA-HT-7485 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7601        TCGA-HT-7602        TCGA-HT-7603        TCGA-HT-7604 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7605        TCGA-HT-7606        TCGA-HT-7607        TCGA-HT-7608 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7609        TCGA-HT-7610        TCGA-HT-7611        TCGA-HT-7616 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7620        TCGA-HT-7676        TCGA-HT-7677        TCGA-HT-7680 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7681        TCGA-HT-7684        TCGA-HT-7686        TCGA-HT-7687 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7688        TCGA-HT-7689        TCGA-HT-7690        TCGA-HT-7691 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7692        TCGA-HT-7693        TCGA-HT-7694        TCGA-HT-7695 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7854        TCGA-HT-7855        TCGA-HT-7856        TCGA-HT-7857 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7858        TCGA-HT-7860        TCGA-HT-7873        TCGA-HT-7874 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7875        TCGA-HT-7877        TCGA-HT-7879        TCGA-HT-7880 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7881        TCGA-HT-7882        TCGA-HT-7884        TCGA-HT-7902 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-8010        TCGA-HT-8011        TCGA-HT-8012        TCGA-HT-8013 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-8015        TCGA-HT-8018        TCGA-HT-8019        TCGA-HT-8104 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-8105        TCGA-HT-8106        TCGA-HT-8107        TCGA-HT-8109 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-8110        TCGA-HT-8111        TCGA-HT-8113        TCGA-HT-8114 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-8558        TCGA-HT-8564        TCGA-HT-A4DV        TCGA-HT-A5R5 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-A5R7        TCGA-HT-A5R9        TCGA-HT-A5RB        TCGA-HT-A614 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-A615        TCGA-HT-A616        TCGA-HT-A617        TCGA-HT-A618 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-A619        TCGA-HT-A61A        TCGA-HT-A61B        TCGA-HT-A74H 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-A74J        TCGA-HT-A74L        TCGA-HT-A74O        TCGA-HW-7486 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HW-7487        TCGA-HW-7489        TCGA-HW-7490        TCGA-HW-7491 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HW-7493        TCGA-HW-7495        TCGA-HW-8319        TCGA-HW-8320 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HW-8321        TCGA-HW-8322        TCGA-HW-A5KJ        TCGA-HW-A5KK 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HW-A5KM        TCGA-IK-7675        TCGA-IK-8125        TCGA-KT-A74X 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-P5-A5ET        TCGA-P5-A5EU        TCGA-P5-A5EV        TCGA-P5-A5EW 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-P5-A5EX        TCGA-P5-A5EY        TCGA-P5-A5EZ        TCGA-P5-A5F0 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-P5-A5F1        TCGA-P5-A5F2        TCGA-P5-A5F4        TCGA-P5-A5F6 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-P5-A72U        TCGA-P5-A72W        TCGA-P5-A72X        TCGA-P5-A72Z 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-P5-A730        TCGA-P5-A731        TCGA-P5-A733        TCGA-P5-A735 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-P5-A736        TCGA-P5-A737        TCGA-P5-A77W        TCGA-P5-A77X 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65S        TCGA-QH-A65V 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-QH-A65X        TCGA-QH-A65Z        TCGA-QH-A6CS        TCGA-QH-A6CU 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-QH-A6CV        TCGA-QH-A6CW        TCGA-QH-A6CX        TCGA-QH-A6CY 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-QH-A6CZ        TCGA-QH-A6X4        TCGA-QH-A6X5        TCGA-QH-A6X8 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-QH-A6X9        TCGA-QH-A6XA        TCGA-QH-A6XC        TCGA-QH-A86X 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-QH-A870        TCGA-R8-A6MK        TCGA-R8-A6ML        TCGA-R8-A6MO 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-R8-A6YH        TCGA-RY-A83X        TCGA-RY-A83Y        TCGA-RY-A83Z 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-RY-A843        TCGA-RY-A845        TCGA-S9-A6TS        TCGA-S9-A6TU 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-S9-A6TV        TCGA-S9-A6TX        TCGA-S9-A6TY        TCGA-S9-A6U0 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-S9-A6U1        TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U9 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-S9-A6WD        TCGA-S9-A6WE        TCGA-S9-A6WG        TCGA-S9-A6WH 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-S9-A6WN        TCGA-S9-A6WP        TCGA-S9-A6WQ        TCGA-S9-A7IQ 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-S9-A7IS        TCGA-S9-A7IY        TCGA-S9-A7IZ        TCGA-S9-A7J0 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-S9-A7J1        TCGA-S9-A7J2        TCGA-S9-A7QX        TCGA-S9-A7QZ 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-S9-A7R1        TCGA-S9-A7R4        TCGA-S9-A7R8        TCGA-TM-A7C5 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-TM-A84R        TCGA-TM-A84S        TCGA-TQ-A7RF        TCGA-TQ-A7RG 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-TQ-A7RH        TCGA-TQ-A7RK        TCGA-TQ-A7RN        TCGA-TQ-A7RQ 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RV        TCGA-TQ-A7RW 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9        TCGA-VM-A8CA 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE        TCGA-VM-A8CH 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-VV-A829        TCGA-VV-A86M        TCGA-VW-A7QS        TCGA-W9-A837 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-WY-A85B        TCGA-WY-A85C        TCGA-WY-A85D 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  LGALS13 MUTATED        0      2      0
  LGALS13 WILD-TYPE    205    218    148
D106V8, multiclass
[1] "Remove cluster labels:" "LGALS13 MUTATED"       
clus
  LGALS13 MUTATED LGALS13 WILD-TYPE 
                2               571 
       TCGA-02-0003        TCGA-02-2470        TCGA-02-2485        TCGA-06-0126 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0128        TCGA-06-0129        TCGA-06-0130        TCGA-06-0154 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0155        TCGA-06-0189        TCGA-06-0238        TCGA-06-0644 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0650        TCGA-06-0875        TCGA-06-0876        TCGA-06-0877 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-0878        TCGA-06-0879        TCGA-06-0882        TCGA-06-0939 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-1804        TCGA-06-1806        TCGA-06-2557        TCGA-06-2558 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-2559        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2570        TCGA-06-5408 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-12-0692        TCGA-12-1597        TCGA-12-3649        TCGA-12-3650 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-12-3652        TCGA-12-3653        TCGA-12-5295        TCGA-12-5301 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0862        TCGA-14-0871        TCGA-14-1823 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-16-0846        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2625        TCGA-19-2631        TCGA-19-4068 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-5947        TCGA-19-5950        TCGA-19-5951        TCGA-19-5952 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-5953        TCGA-19-5954        TCGA-19-5955        TCGA-19-5958 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-19-5959        TCGA-19-5960        TCGA-26-1442        TCGA-26-5132 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-26-5133        TCGA-26-5134        TCGA-26-6173        TCGA-26-6174 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1836        TCGA-27-2518        TCGA-27-2528 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-1747        TCGA-28-1753        TCGA-28-2501        TCGA-28-5208 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-28-5214        TCGA-32-1970        TCGA-32-1982        TCGA-32-1986 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-32-1991        TCGA-32-4210        TCGA-32-4211        TCGA-32-5222 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-41-6646 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-74-6573        TCGA-74-6575        TCGA-74-6577        TCGA-74-6578 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-74-6584        TCGA-76-4926        TCGA-76-4927        TCGA-76-4928 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-4929        TCGA-76-4931        TCGA-76-4932        TCGA-76-6192 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-6193        TCGA-76-6282        TCGA-76-6283        TCGA-76-6285 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-CS-4938        TCGA-CS-4942        TCGA-CS-4943        TCGA-CS-4944 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-CS-5390        TCGA-CS-5393        TCGA-CS-5394        TCGA-CS-5396 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-CS-5397        TCGA-CS-6186        TCGA-CS-6188        TCGA-CS-6665 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-CS-6666        TCGA-CS-6668        TCGA-CS-6669        TCGA-CS-6670 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274        TCGA-DB-5275 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DB-5277        TCGA-DB-5278        TCGA-DB-5279        TCGA-DB-5280 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DB-5281        TCGA-DB-A4X9        TCGA-DB-A4XA        TCGA-DB-A4XB 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DB-A4XC        TCGA-DB-A4XD        TCGA-DB-A4XE        TCGA-DB-A4XF 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DB-A4XG        TCGA-DB-A4XH        TCGA-DB-A64L        TCGA-DB-A64O 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DB-A64P        TCGA-DB-A64Q        TCGA-DB-A64R        TCGA-DB-A64S 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DB-A64U        TCGA-DB-A64V        TCGA-DB-A64W        TCGA-DB-A64X 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DB-A75K        TCGA-DB-A75L        TCGA-DB-A75M        TCGA-DB-A75O 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DB-A75P        TCGA-DH-5140        TCGA-DH-5141        TCGA-DH-5142 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DH-5143        TCGA-DH-5144        TCGA-DH-A66B        TCGA-DH-A66D 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DH-A66F        TCGA-DH-A66G        TCGA-DH-A7US        TCGA-DU-5847 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-5849        TCGA-DU-5851        TCGA-DU-5852        TCGA-DU-5853 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-5854        TCGA-DU-5855        TCGA-DU-5870        TCGA-DU-5871 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-5872        TCGA-DU-5874        TCGA-DU-6392        TCGA-DU-6393 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-6394        TCGA-DU-6395        TCGA-DU-6396        TCGA-DU-6397 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-6399        TCGA-DU-6400        TCGA-DU-6401        TCGA-DU-6402 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-6403        TCGA-DU-6404        TCGA-DU-6405        TCGA-DU-6406 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-6407        TCGA-DU-6408        TCGA-DU-6410        TCGA-DU-6542 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-7006        TCGA-DU-7007        TCGA-DU-7008        TCGA-DU-7009 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-7010        TCGA-DU-7011        TCGA-DU-7012        TCGA-DU-7013 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-7014        TCGA-DU-7015        TCGA-DU-7018        TCGA-DU-7019 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-7290        TCGA-DU-7292        TCGA-DU-7294        TCGA-DU-7298 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-7300        TCGA-DU-7301        TCGA-DU-7302        TCGA-DU-7304 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-7306        TCGA-DU-7309        TCGA-DU-8158        TCGA-DU-8161 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-8162        TCGA-DU-8163        TCGA-DU-8164        TCGA-DU-8165 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-8166        TCGA-DU-8167        TCGA-DU-8168        TCGA-DU-A5TP 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-A5TR        TCGA-DU-A5TS        TCGA-DU-A5TT        TCGA-DU-A5TU 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-A5TW        TCGA-DU-A5TY        TCGA-DU-A6S2        TCGA-DU-A6S3 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L        TCGA-DU-A76O 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7TA        TCGA-DU-A7TB 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-DU-A7TD        TCGA-DU-A7TG        TCGA-DU-A7TI        TCGA-DU-A7TJ 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-E1-5302        TCGA-E1-5303        TCGA-E1-5304        TCGA-E1-5305 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-E1-5307        TCGA-E1-5311        TCGA-E1-5318        TCGA-E1-5322 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-E1-A7YH        TCGA-E1-A7YI        TCGA-E1-A7YJ        TCGA-E1-A7YL 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-E1-A7YM        TCGA-E1-A7YN        TCGA-E1-A7YQ        TCGA-E1-A7YS 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-E1-A7YV        TCGA-E1-A7YW        TCGA-E1-A7YY        TCGA-E1-A7Z2 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-E1-A7Z3        TCGA-E1-A7Z6        TCGA-EZ-7264        TCGA-F6-A8O3 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-F6-A8O4        TCGA-FG-5962        TCGA-FG-5963        TCGA-FG-5964 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-FG-5965        TCGA-FG-6688        TCGA-FG-6689        TCGA-FG-6690 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-FG-6691        TCGA-FG-7634        TCGA-FG-7636        TCGA-FG-7637 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-FG-7638        TCGA-FG-7641        TCGA-FG-7643        TCGA-FG-8181 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-FG-8182        TCGA-FG-8185        TCGA-FG-8186        TCGA-FG-8187 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-FG-8188        TCGA-FG-8189        TCGA-FG-8191        TCGA-FG-A4MT 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-FG-A4MU        TCGA-FG-A4MW        TCGA-FG-A4MX        TCGA-FG-A4MY 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-FG-A60J        TCGA-FG-A60L        TCGA-FG-A6IZ        TCGA-FG-A6J3 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-FG-A70Y        TCGA-FG-A70Z        TCGA-FG-A710        TCGA-FG-A713 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-FG-A87N        TCGA-FG-A87Q        TCGA-HT-7467        TCGA-HT-7468 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7469        TCGA-HT-7470        TCGA-HT-7471        TCGA-HT-7472 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7473        TCGA-HT-7474        TCGA-HT-7475        TCGA-HT-7476 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7477        TCGA-HT-7478        TCGA-HT-7479        TCGA-HT-7480 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7481        TCGA-HT-7482        TCGA-HT-7483        TCGA-HT-7485 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7601        TCGA-HT-7602        TCGA-HT-7603        TCGA-HT-7604 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7605        TCGA-HT-7606        TCGA-HT-7607        TCGA-HT-7608 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7609        TCGA-HT-7610        TCGA-HT-7611        TCGA-HT-7616 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7620        TCGA-HT-7676        TCGA-HT-7677        TCGA-HT-7680 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7681        TCGA-HT-7684        TCGA-HT-7686        TCGA-HT-7687 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7688        TCGA-HT-7689        TCGA-HT-7690        TCGA-HT-7691 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7692        TCGA-HT-7693        TCGA-HT-7694        TCGA-HT-7695 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7854        TCGA-HT-7855        TCGA-HT-7856        TCGA-HT-7857 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7858        TCGA-HT-7860        TCGA-HT-7873        TCGA-HT-7874 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7875        TCGA-HT-7877        TCGA-HT-7879        TCGA-HT-7880 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-7881        TCGA-HT-7882        TCGA-HT-7884        TCGA-HT-7902 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-8010        TCGA-HT-8011        TCGA-HT-8012        TCGA-HT-8013 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-8015        TCGA-HT-8018        TCGA-HT-8019        TCGA-HT-8104 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-8105        TCGA-HT-8106        TCGA-HT-8107        TCGA-HT-8109 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-8110        TCGA-HT-8111        TCGA-HT-8113        TCGA-HT-8114 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-8558        TCGA-HT-8564        TCGA-HT-A4DV        TCGA-HT-A5R5 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-A5R7        TCGA-HT-A5R9        TCGA-HT-A5RB        TCGA-HT-A614 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-A615        TCGA-HT-A616        TCGA-HT-A617        TCGA-HT-A618 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-A619        TCGA-HT-A61A        TCGA-HT-A61B        TCGA-HT-A74H 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HT-A74J        TCGA-HT-A74L        TCGA-HT-A74O        TCGA-HW-7486 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HW-7487        TCGA-HW-7489        TCGA-HW-7490        TCGA-HW-7491 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HW-7493        TCGA-HW-7495        TCGA-HW-8319        TCGA-HW-8320 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HW-8321        TCGA-HW-8322        TCGA-HW-A5KJ        TCGA-HW-A5KK 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-HW-A5KM        TCGA-IK-7675        TCGA-IK-8125        TCGA-KT-A74X 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-P5-A5ET        TCGA-P5-A5EU        TCGA-P5-A5EV        TCGA-P5-A5EW 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-P5-A5EX        TCGA-P5-A5EY        TCGA-P5-A5EZ        TCGA-P5-A5F0 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-P5-A5F1        TCGA-P5-A5F2        TCGA-P5-A5F4        TCGA-P5-A5F6 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-P5-A72U        TCGA-P5-A72W        TCGA-P5-A72X        TCGA-P5-A72Z 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-P5-A730        TCGA-P5-A731        TCGA-P5-A733        TCGA-P5-A735 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-P5-A736        TCGA-P5-A737        TCGA-P5-A77W        TCGA-P5-A77X 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65S        TCGA-QH-A65V 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-QH-A65X        TCGA-QH-A65Z        TCGA-QH-A6CS        TCGA-QH-A6CU 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-QH-A6CV        TCGA-QH-A6CW        TCGA-QH-A6CX        TCGA-QH-A6CY 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-QH-A6CZ        TCGA-QH-A6X4        TCGA-QH-A6X5        TCGA-QH-A6X8 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-QH-A6X9        TCGA-QH-A6XA        TCGA-QH-A6XC        TCGA-QH-A86X 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-QH-A870        TCGA-R8-A6MK        TCGA-R8-A6ML        TCGA-R8-A6MO 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-R8-A6YH        TCGA-RY-A83X        TCGA-RY-A83Y        TCGA-RY-A83Z 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-RY-A843        TCGA-RY-A845        TCGA-S9-A6TS        TCGA-S9-A6TU 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-S9-A6TV        TCGA-S9-A6TX        TCGA-S9-A6TY        TCGA-S9-A6U0 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-S9-A6U1        TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U9 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-S9-A6WD        TCGA-S9-A6WE        TCGA-S9-A6WG        TCGA-S9-A6WH 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-S9-A6WN        TCGA-S9-A6WP        TCGA-S9-A6WQ        TCGA-S9-A7IQ 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-S9-A7IS        TCGA-S9-A7IY        TCGA-S9-A7IZ        TCGA-S9-A7J0 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-S9-A7J1        TCGA-S9-A7J2        TCGA-S9-A7QX        TCGA-S9-A7QZ 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-S9-A7R1        TCGA-S9-A7R4        TCGA-S9-A7R8        TCGA-TM-A7C5 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-TM-A84R        TCGA-TM-A84S        TCGA-TQ-A7RF        TCGA-TQ-A7RG 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-TQ-A7RH        TCGA-TQ-A7RK        TCGA-TQ-A7RN        TCGA-TQ-A7RQ 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RV        TCGA-TQ-A7RW 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9        TCGA-VM-A8CA 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE        TCGA-VM-A8CH 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-VV-A829        TCGA-VV-A86M        TCGA-VW-A7QS        TCGA-W9-A837 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
       TCGA-WY-A85B        TCGA-WY-A85C        TCGA-WY-A85D 
"LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" "LGALS13 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  LGALS13 MUTATED        1      1      1
  LGALS13 WILD-TYPE    237    190    227
D106V9, multiclass
        clus
vv       LGALS13 MUTATED LGALS13 WILD-TYPE
  CLUS_1               1               237
  CLUS_2               1               190
  CLUS_3               1               227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  LGALS13 MUTATED        1      0      2
  LGALS13 WILD-TYPE    195    191    268
D106V10, multiclass
        clus
vv       LGALS13 MUTATED LGALS13 WILD-TYPE
  CLUS_1               1               195
  CLUS_2               0               191
  CLUS_3               2               268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LGALS13 MUTATED        3      0      0      0
  LGALS13 WILD-TYPE    137    107     83    182
D106V11, multiclass
        clus
vv       LGALS13 MUTATED LGALS13 WILD-TYPE
  CLUS_1               3               137
  CLUS_2               0               107
  CLUS_3               0                83
  CLUS_4               0               182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  LGALS13 MUTATED        3      0      0
  LGALS13 WILD-TYPE    220    186    103
D106V12, multiclass
        clus
vv       LGALS13 MUTATED LGALS13 WILD-TYPE
  CLUS_1               3               220
  CLUS_2               0               186
  CLUS_3               0               103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LGALS13 MUTATED        1      2      0      0
  LGALS13 WILD-TYPE    126    117    106    156
D106V13, multiclass
        clus
vv       LGALS13 MUTATED LGALS13 WILD-TYPE
  CLUS_1               1               126
  CLUS_2               2               117
  CLUS_3               0               106
  CLUS_4               0               156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  LGALS13 MUTATED        0      1      0      1      1      0
  LGALS13 WILD-TYPE     99     76    120     56     62     92
D106V14, multiclass
        clus
vv       LGALS13 MUTATED LGALS13 WILD-TYPE
  CLUS_1               0                99
  CLUS_2               1                76
  CLUS_3               0               120
  CLUS_4               1                56
  CLUS_5               1                62
  CLUS_6               0                92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(107) Variable = CD44 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD44 MUTATED        2      0      1      0
  CD44 WILD-TYPE     76     41     63     57
D107V1, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            2             76
  CLUS_2            0             41
  CLUS_3            1             63
  CLUS_4            0             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD44 MUTATED        2      0      1      0
  CD44 WILD-TYPE     61     50     47     79
D107V2, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            2             61
  CLUS_2            0             50
  CLUS_3            1             47
  CLUS_4            0             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD44 MUTATED        0      1      0      2
  CD44 WILD-TYPE     70     97     44     61
D107V3, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            0             70
  CLUS_2            1             97
  CLUS_3            0             44
  CLUS_4            2             61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD44 MUTATED        1      1      1
  CD44 WILD-TYPE    137     60     75
D107V4, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            1            137
  CLUS_2            1             60
  CLUS_3            1             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD44 MUTATED        4      2      0
  CD44 WILD-TYPE    288    430     62
D107V5, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            4            288
  CLUS_2            2            430
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD44 MUTATED        1      1      0      1
  CD44 WILD-TYPE    152    222     88    160
D107V6, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            1            152
  CLUS_2            1            222
  CLUS_3            0             88
  CLUS_4            1            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD44 MUTATED        4      0      0      0
  CD44 WILD-TYPE    181    155    138     95
D107V7, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            4            181
  CLUS_2            0            155
  CLUS_3            0            138
  CLUS_4            0             95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD44 MUTATED        2      2      0
  CD44 WILD-TYPE    203    218    148
D107V8, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            2            203
  CLUS_2            2            218
  CLUS_3            0            148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD44 MUTATED        1      2      0
  CD44 WILD-TYPE    237    189    228
D107V9, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            1            237
  CLUS_2            2            189
  CLUS_3            0            228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD44 MUTATED        0      1      2
  CD44 WILD-TYPE    196    190    268
D107V10, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            0            196
  CLUS_2            1            190
  CLUS_3            2            268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD44 MUTATED        0      1      0      2
  CD44 WILD-TYPE    140    106     83    180
D107V11, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            0            140
  CLUS_2            1            106
  CLUS_3            0             83
  CLUS_4            2            180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD44 MUTATED        0      2      1
  CD44 WILD-TYPE    223    184    102
D107V12, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            0            223
  CLUS_2            2            184
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD44 MUTATED        0      1      0      2
  CD44 WILD-TYPE    127    118    106    154
D107V13, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            0            127
  CLUS_2            1            118
  CLUS_3            0            106
  CLUS_4            2            154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  CD44 MUTATED        0      1      1      0      0      1
  CD44 WILD-TYPE     99     76    119     57     63     91
D107V14, multiclass
        clus
vv       CD44 MUTATED CD44 WILD-TYPE
  CLUS_1            0             99
  CLUS_2            1             76
  CLUS_3            1            119
  CLUS_4            0             57
  CLUS_5            0             63
  CLUS_6            1             91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(108) Variable = GRHL3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GRHL3 MUTATED        2      0      1      1
  GRHL3 WILD-TYPE     76     41     63     56
D108V1, multiclass
        clus
vv       GRHL3 MUTATED GRHL3 WILD-TYPE
  CLUS_1             2              76
  CLUS_2             0              41
  CLUS_3             1              63
  CLUS_4             1              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GRHL3 MUTATED        1      1      1      1
  GRHL3 WILD-TYPE     62     49     47     78
D108V2, multiclass
        clus
vv       GRHL3 MUTATED GRHL3 WILD-TYPE
  CLUS_1             1              62
  CLUS_2             1              49
  CLUS_3             1              47
  CLUS_4             1              78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GRHL3 MUTATED        1      2      0      1
  GRHL3 WILD-TYPE     69     96     44     62
D108V3, multiclass
        clus
vv       GRHL3 MUTATED GRHL3 WILD-TYPE
  CLUS_1             1              69
  CLUS_2             2              96
  CLUS_3             0              44
  CLUS_4             1              62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GRHL3 MUTATED        1      1      2
  GRHL3 WILD-TYPE    137     60     74
D108V4, multiclass
        clus
vv       GRHL3 MUTATED GRHL3 WILD-TYPE
  CLUS_1             1             137
  CLUS_2             1              60
  CLUS_3             2              74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GRHL3 MUTATED        6      1      0
  GRHL3 WILD-TYPE    286    431     62
D108V5, multiclass
        clus
vv       GRHL3 MUTATED GRHL3 WILD-TYPE
  CLUS_1             6             286
  CLUS_2             1             431
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GRHL3 MUTATED        4      1      1      0
  GRHL3 WILD-TYPE    149    222     87    161
D108V6, multiclass
        clus
vv       GRHL3 MUTATED GRHL3 WILD-TYPE
  CLUS_1             4             149
  CLUS_2             1             222
  CLUS_3             1              87
  CLUS_4             0             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GRHL3 MUTATED        1      2      1      1
  GRHL3 WILD-TYPE    184    153    137     94
D108V7, multiclass
        clus
vv       GRHL3 MUTATED GRHL3 WILD-TYPE
  CLUS_1             1             184
  CLUS_2             2             153
  CLUS_3             1             137
  CLUS_4             1              94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GRHL3 MUTATED        2      1      2
  GRHL3 WILD-TYPE    203    219    146
D108V8, multiclass
        clus
vv       GRHL3 MUTATED GRHL3 WILD-TYPE
  CLUS_1             2             203
  CLUS_2             1             219
  CLUS_3             2             146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GRHL3 MUTATED        5      1      0
  GRHL3 WILD-TYPE    233    190    228
D108V9, multiclass
        clus
vv       GRHL3 MUTATED GRHL3 WILD-TYPE
  CLUS_1             5             233
  CLUS_2             1             190
  CLUS_3             0             228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GRHL3 MUTATED        3      2      1
  GRHL3 WILD-TYPE    193    189    269
D108V10, multiclass
        clus
vv       GRHL3 MUTATED GRHL3 WILD-TYPE
  CLUS_1             3             193
  CLUS_2             2             189
  CLUS_3             1             269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GRHL3 MUTATED        1      2      0      1
  GRHL3 WILD-TYPE    139    105     83    181
D108V11, multiclass
        clus
vv       GRHL3 MUTATED GRHL3 WILD-TYPE
  CLUS_1             1             139
  CLUS_2             2             105
  CLUS_3             0              83
  CLUS_4             1             181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GRHL3 MUTATED        0      1      3
  GRHL3 WILD-TYPE    223    185    100
D108V12, multiclass
        clus
vv       GRHL3 MUTATED GRHL3 WILD-TYPE
  CLUS_1             0             223
  CLUS_2             1             185
  CLUS_3             3             100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GRHL3 MUTATED        1      0      0      3
  GRHL3 WILD-TYPE    126    119    106    153
D108V13, multiclass
        clus
vv       GRHL3 MUTATED GRHL3 WILD-TYPE
  CLUS_1             1             126
  CLUS_2             0             119
  CLUS_3             0             106
  CLUS_4             3             153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  GRHL3 MUTATED        0      0      1      0      2      1
  GRHL3 WILD-TYPE     99     77    119     57     61     91
D108V14, multiclass
        clus
vv       GRHL3 MUTATED GRHL3 WILD-TYPE
  CLUS_1             0              99
  CLUS_2             0              77
  CLUS_3             1             119
  CLUS_4             0              57
  CLUS_5             2              61
  CLUS_6             1              91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(109) Variable = CD1D MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD1D MUTATED        1      1      1      0
  CD1D WILD-TYPE     77     40     63     57
D109V1, multiclass
        clus
vv       CD1D MUTATED CD1D WILD-TYPE
  CLUS_1            1             77
  CLUS_2            1             40
  CLUS_3            1             63
  CLUS_4            0             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD1D MUTATED        1      1      0      1
  CD1D WILD-TYPE     62     49     48     78
D109V2, multiclass
        clus
vv       CD1D MUTATED CD1D WILD-TYPE
  CLUS_1            1             62
  CLUS_2            1             49
  CLUS_3            0             48
  CLUS_4            1             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD1D MUTATED        2      2      0      0
  CD1D WILD-TYPE     68     96     44     63
D109V3, multiclass
        clus
vv       CD1D MUTATED CD1D WILD-TYPE
  CLUS_1            2             68
  CLUS_2            2             96
  CLUS_3            0             44
  CLUS_4            0             63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD1D MUTATED        1      0      3
  CD1D WILD-TYPE    137     61     73
D109V4, multiclass
        clus
vv       CD1D MUTATED CD1D WILD-TYPE
  CLUS_1            1            137
  CLUS_2            0             61
  CLUS_3            3             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD1D MUTATED        4      0      0
  CD1D WILD-TYPE    288    432     62
D109V5, multiclass
        clus
vv       CD1D MUTATED CD1D WILD-TYPE
  CLUS_1            4            288
  CLUS_2            0            432
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD1D MUTATED        2      0      1      0
  CD1D WILD-TYPE    151    223     87    161
D109V6, multiclass
        clus
vv       CD1D MUTATED CD1D WILD-TYPE
  CLUS_1            2            151
  CLUS_2            0            223
  CLUS_3            1             87
  CLUS_4            0            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD1D MUTATED        2      0      1      0
  CD1D WILD-TYPE    183    155    137     95
D109V7, multiclass
        clus
vv       CD1D MUTATED CD1D WILD-TYPE
  CLUS_1            2            183
  CLUS_2            0            155
  CLUS_3            1            137
  CLUS_4            0             95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD1D MUTATED        1      2      0
  CD1D WILD-TYPE    204    218    148
D109V8, multiclass
        clus
vv       CD1D MUTATED CD1D WILD-TYPE
  CLUS_1            1            204
  CLUS_2            2            218
  CLUS_3            0            148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD1D MUTATED        1      0      0
  CD1D WILD-TYPE    237    191    228
D109V9, multiclass
[1] "Remove cluster labels:" "CD1D MUTATED"          
clus
  CD1D MUTATED CD1D WILD-TYPE 
             1            656 
    TCGA-02-0047     TCGA-02-0055     TCGA-02-2483     TCGA-02-2485 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-02-2486     TCGA-06-0129     TCGA-06-0130     TCGA-06-0132 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0141     TCGA-06-0157     TCGA-06-0158     TCGA-06-0168 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0174     TCGA-06-0178     TCGA-06-0219     TCGA-06-0238 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0644     TCGA-06-0645     TCGA-06-0646     TCGA-06-0649 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0878 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0882     TCGA-06-1804     TCGA-06-2557     TCGA-06-2558 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-2559     TCGA-06-2561     TCGA-06-2562     TCGA-06-2563 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-2564     TCGA-06-2565     TCGA-06-2567     TCGA-06-2569 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-2570     TCGA-06-5408     TCGA-06-5410     TCGA-06-5411 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-5412     TCGA-06-5413     TCGA-06-5414     TCGA-06-5415 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-5417     TCGA-06-5418     TCGA-06-5856     TCGA-06-5858 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-5859     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0821     TCGA-12-1597     TCGA-12-3650 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-14-0817     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-14-2554     TCGA-15-0742     TCGA-15-1444     TCGA-16-0846 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-16-1045     TCGA-19-1390     TCGA-19-2619     TCGA-19-2620 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-19-2624     TCGA-19-2625     TCGA-19-2629     TCGA-19-5960 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-27-1830 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1834     TCGA-27-1835 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-27-1837     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2528     TCGA-28-1747 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2499     TCGA-28-2509     TCGA-28-2510 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5213     TCGA-28-5215 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5220     TCGA-32-1970 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-2615     TCGA-32-2632 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4213     TCGA-32-5222 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-3915     TCGA-41-4097 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-41-5651     TCGA-76-4925     TCGA-76-4926     TCGA-76-4927 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-76-4928     TCGA-76-4929     TCGA-76-4931     TCGA-76-4932 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75M 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-6392     TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7011 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74J     TCGA-HT-A74K     TCGA-HT-A74L 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6U9     TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6WE     TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6WL     TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6WP     TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A7IX     TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A7J1     TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A7QX     TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A7R2     TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A7R8     TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TM-A7C4     TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TM-A84B     TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TM-A84H     TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TM-A84M     TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TM-A84S     TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TQ-A7RH     TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TQ-A7RM     TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TQ-A7RQ     TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TQ-A7RV     TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-VM-A8C9     TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-VM-A8CE     TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-VV-A86M     TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-WH-A86K     TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-WY-A85B     TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD1D MUTATED        1      0      0
  CD1D WILD-TYPE    195    191    270
D109V10, multiclass
[1] "Remove cluster labels:" "CD1D MUTATED"          
clus
  CD1D MUTATED CD1D WILD-TYPE 
             1            656 
    TCGA-02-0047     TCGA-02-0055     TCGA-02-2483     TCGA-02-2485 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-02-2486     TCGA-06-0129     TCGA-06-0130     TCGA-06-0132 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0141     TCGA-06-0157     TCGA-06-0158     TCGA-06-0168 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0174     TCGA-06-0178     TCGA-06-0219     TCGA-06-0238 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0644     TCGA-06-0645     TCGA-06-0646     TCGA-06-0649 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0878 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-0882     TCGA-06-1804     TCGA-06-2557     TCGA-06-2558 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-2559     TCGA-06-2561     TCGA-06-2562     TCGA-06-2563 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-2564     TCGA-06-2565     TCGA-06-2567     TCGA-06-2569 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-2570     TCGA-06-5408     TCGA-06-5410     TCGA-06-5411 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-5412     TCGA-06-5413     TCGA-06-5414     TCGA-06-5415 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-5417     TCGA-06-5418     TCGA-06-5856     TCGA-06-5858 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-06-5859     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0821     TCGA-12-1597     TCGA-12-3650 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-14-0817     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-14-2554     TCGA-15-0742     TCGA-15-1444     TCGA-16-0846 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-16-1045     TCGA-19-1390     TCGA-19-2619     TCGA-19-2620 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-19-2624     TCGA-19-2625     TCGA-19-2629     TCGA-19-5960 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-27-1830 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1834     TCGA-27-1835 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-27-1837     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2528     TCGA-28-1747 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2499     TCGA-28-2509     TCGA-28-2510 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5213     TCGA-28-5215 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5220     TCGA-32-1970 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-2615     TCGA-32-2632 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4213     TCGA-32-5222 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-3915     TCGA-41-4097 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-41-5651     TCGA-76-4925     TCGA-76-4926     TCGA-76-4927 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-76-4928     TCGA-76-4929     TCGA-76-4931     TCGA-76-4932 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75M 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-6392     TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7011 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74J     TCGA-HT-A74K     TCGA-HT-A74L 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6U9     TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6WE     TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6WL     TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A6WP     TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A7IX     TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A7J1     TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A7QX     TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A7R2     TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-S9-A7R8     TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TM-A7C4     TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TM-A84B     TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TM-A84H     TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TM-A84M     TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TM-A84S     TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TQ-A7RH     TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TQ-A7RM     TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TQ-A7RQ     TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-TQ-A7RV     TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-VM-A8C9     TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-VM-A8CE     TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-VV-A86M     TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-WH-A86K     TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
    TCGA-WY-A85B     TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" "CD1D WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD1D MUTATED        0      0      0      0
  CD1D WILD-TYPE    140    107     83    182
D109V11, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD1D MUTATED        0      0      0
  CD1D WILD-TYPE    223    186    103
D109V12, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD1D MUTATED        0      0      0      0
  CD1D WILD-TYPE    127    119    106    156
D109V13, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  CD1D MUTATED        0      0      0      0      0      0
  CD1D WILD-TYPE     99     77    120     57     63     92
D109V14, multiclass

Clustering(110) Variable = CNOT1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNOT1 MUTATED        0      0      0      1
  CNOT1 WILD-TYPE     78     41     64     56
D110V1, multiclass
[1] "Remove cluster labels:" "CNOT1 MUTATED"         
clus
  CNOT1 MUTATED CNOT1 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNOT1 MUTATED        0      1      0      0
  CNOT1 WILD-TYPE     63     49     48     79
D110V2, multiclass
[1] "Remove cluster labels:" "CNOT1 MUTATED"         
clus
  CNOT1 MUTATED CNOT1 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNOT1 MUTATED        0      1      0      0
  CNOT1 WILD-TYPE     70     97     44     63
D110V3, multiclass
[1] "Remove cluster labels:" "CNOT1 MUTATED"         
clus
  CNOT1 MUTATED CNOT1 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNOT1 MUTATED        0      0      1
  CNOT1 WILD-TYPE    138     61     75
D110V4, multiclass
[1] "Remove cluster labels:" "CNOT1 MUTATED"         
clus
  CNOT1 MUTATED CNOT1 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"CNOT1 WILD-TYPE" "CNOT1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNOT1 MUTATED        2      6      0
  CNOT1 WILD-TYPE    290    426     62
D110V5, multiclass
        clus
vv       CNOT1 MUTATED CNOT1 WILD-TYPE
  CLUS_1             2             290
  CLUS_2             6             426
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNOT1 MUTATED        1      3      1      2
  CNOT1 WILD-TYPE    152    220     87    159
D110V6, multiclass
        clus
vv       CNOT1 MUTATED CNOT1 WILD-TYPE
  CLUS_1             1             152
  CLUS_2             3             220
  CLUS_3             1              87
  CLUS_4             2             159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNOT1 MUTATED        4      2      1      0
  CNOT1 WILD-TYPE    181    153    137     95
D110V7, multiclass
        clus
vv       CNOT1 MUTATED CNOT1 WILD-TYPE
  CLUS_1             4             181
  CLUS_2             2             153
  CLUS_3             1             137
  CLUS_4             0              95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNOT1 MUTATED        2      3      2
  CNOT1 WILD-TYPE    203    217    146
D110V8, multiclass
        clus
vv       CNOT1 MUTATED CNOT1 WILD-TYPE
  CLUS_1             2             203
  CLUS_2             3             217
  CLUS_3             2             146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNOT1 MUTATED        3      3      2
  CNOT1 WILD-TYPE    235    188    226
D110V9, multiclass
        clus
vv       CNOT1 MUTATED CNOT1 WILD-TYPE
  CLUS_1             3             235
  CLUS_2             3             188
  CLUS_3             2             226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNOT1 MUTATED        0      5      3
  CNOT1 WILD-TYPE    196    186    267
D110V10, multiclass
        clus
vv       CNOT1 MUTATED CNOT1 WILD-TYPE
  CLUS_1             0             196
  CLUS_2             5             186
  CLUS_3             3             267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNOT1 MUTATED        2      2      0      3
  CNOT1 WILD-TYPE    138    105     83    179
D110V11, multiclass
        clus
vv       CNOT1 MUTATED CNOT1 WILD-TYPE
  CLUS_1             2             138
  CLUS_2             2             105
  CLUS_3             0              83
  CLUS_4             3             179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNOT1 MUTATED        2      3      2
  CNOT1 WILD-TYPE    221    183    101
D110V12, multiclass
        clus
vv       CNOT1 MUTATED CNOT1 WILD-TYPE
  CLUS_1             2             221
  CLUS_2             3             183
  CLUS_3             2             101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNOT1 MUTATED        1      3      0      3
  CNOT1 WILD-TYPE    126    116    106    153
D110V13, multiclass
        clus
vv       CNOT1 MUTATED CNOT1 WILD-TYPE
  CLUS_1             1             126
  CLUS_2             3             116
  CLUS_3             0             106
  CLUS_4             3             153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  CNOT1 MUTATED        1      3      1      0      0      2
  CNOT1 WILD-TYPE     98     74    119     57     63     90
D110V14, multiclass
        clus
vv       CNOT1 MUTATED CNOT1 WILD-TYPE
  CLUS_1             1              98
  CLUS_2             3              74
  CLUS_3             1             119
  CLUS_4             0              57
  CLUS_5             0              63
  CLUS_6             2              90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(111) Variable = NAP1L2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NAP1L2 MUTATED        1      0      0      1
  NAP1L2 WILD-TYPE     77     41     64     56
D111V1, multiclass
[1] "Remove cluster labels:" "NAP1L2 MUTATED"        
clus
  NAP1L2 MUTATED NAP1L2 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2559       TCGA-06-2561       TCGA-06-2562       TCGA-06-2563 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2564       TCGA-06-2565       TCGA-06-2567       TCGA-06-2569 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2570       TCGA-06-5408       TCGA-06-5410       TCGA-06-5411 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5412       TCGA-06-5413       TCGA-06-5414       TCGA-06-5415 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5417       TCGA-06-5418       TCGA-06-5856       TCGA-06-5858 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5859       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0781 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0871       TCGA-14-1456 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5954       TCGA-19-5955 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-27-1830 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2501       TCGA-28-2502 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-2509       TCGA-28-2510       TCGA-28-2513       TCGA-28-2514 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5204       TCGA-28-5207       TCGA-28-5208       TCGA-28-5209 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NAP1L2 MUTATED        1      1      0      0
  NAP1L2 WILD-TYPE     62     49     48     79
D111V2, multiclass
[1] "Remove cluster labels:" "NAP1L2 MUTATED"        
clus
  NAP1L2 MUTATED NAP1L2 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2559       TCGA-06-2561       TCGA-06-2562       TCGA-06-2563 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2564       TCGA-06-2565       TCGA-06-2567       TCGA-06-2569 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2570       TCGA-06-5408       TCGA-06-5410       TCGA-06-5411 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5412       TCGA-06-5413       TCGA-06-5414       TCGA-06-5415 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5417       TCGA-06-5418       TCGA-06-5856       TCGA-06-5858 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5859       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0781 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0871       TCGA-14-1456 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5954       TCGA-19-5955 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-27-1830 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2501       TCGA-28-2502 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-2509       TCGA-28-2510       TCGA-28-2513       TCGA-28-2514 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5204       TCGA-28-5207       TCGA-28-5208       TCGA-28-5209 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NAP1L2 MUTATED        0      0      1      1
  NAP1L2 WILD-TYPE     70     98     43     62
D111V3, multiclass
[1] "Remove cluster labels:" "NAP1L2 MUTATED"        
clus
  NAP1L2 MUTATED NAP1L2 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-1806 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6388       TCGA-06-6389 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-06-6693       TCGA-06-6694 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-6695       TCGA-06-6697       TCGA-06-6698       TCGA-06-6699 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-6700       TCGA-06-6701       TCGA-08-0386       TCGA-12-0616 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0740       TCGA-14-0781       TCGA-14-0786 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-0787       TCGA-14-0789       TCGA-14-0790       TCGA-14-0813 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-0817       TCGA-14-0862       TCGA-14-0871       TCGA-14-1043 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-1395       TCGA-14-1450       TCGA-14-1456       TCGA-14-1823 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-1825       TCGA-14-1829       TCGA-14-2554       TCGA-14-3476 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-4157       TCGA-15-0742       TCGA-15-1444       TCGA-16-0846 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-16-0861       TCGA-16-1045       TCGA-16-1048       TCGA-19-1390 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-1790       TCGA-19-2619       TCGA-19-2620       TCGA-19-2623 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-2624       TCGA-19-2625       TCGA-19-2629       TCGA-19-2631 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-4068       TCGA-19-5947       TCGA-19-5950       TCGA-19-5951 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-5952       TCGA-19-5953       TCGA-19-5954       TCGA-19-5955 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-26-6173 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-26-6174       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5211       TCGA-28-5213       TCGA-28-5214 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-87-5896 
"NAP1L2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NAP1L2 MUTATED        1      1      0
  NAP1L2 WILD-TYPE    137     60     76
D111V4, multiclass
[1] "Remove cluster labels:" "NAP1L2 MUTATED"        
clus
  NAP1L2 MUTATED NAP1L2 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-1806 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6388       TCGA-06-6389 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-06-6693       TCGA-06-6694 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-6695       TCGA-06-6697       TCGA-06-6698       TCGA-06-6699 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-06-6700       TCGA-06-6701       TCGA-08-0386       TCGA-12-0616 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0740       TCGA-14-0781       TCGA-14-0786 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-0787       TCGA-14-0789       TCGA-14-0790       TCGA-14-0813 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-0817       TCGA-14-0862       TCGA-14-0871       TCGA-14-1043 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-1395       TCGA-14-1450       TCGA-14-1456       TCGA-14-1823 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-1825       TCGA-14-1829       TCGA-14-2554       TCGA-14-3476 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-14-4157       TCGA-15-0742       TCGA-15-1444       TCGA-16-0846 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-16-0861       TCGA-16-1045       TCGA-16-1048       TCGA-19-1390 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-1790       TCGA-19-2619       TCGA-19-2620       TCGA-19-2623 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-2624       TCGA-19-2625       TCGA-19-2629       TCGA-19-2631 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-4068       TCGA-19-5947       TCGA-19-5950       TCGA-19-5951 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-5952       TCGA-19-5953       TCGA-19-5954       TCGA-19-5955 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-26-6173 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-26-6174       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5211       TCGA-28-5213       TCGA-28-5214 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" "NAP1L2 WILD-TYPE" 
      TCGA-87-5896 
"NAP1L2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NAP1L2 MUTATED        2      4      0
  NAP1L2 WILD-TYPE    290    428     62
D111V5, multiclass
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              2              290
  CLUS_2              4              428
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NAP1L2 MUTATED        0      2      0      2
  NAP1L2 WILD-TYPE    153    221     88    159
D111V6, multiclass
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              0              153
  CLUS_2              2              221
  CLUS_3              0               88
  CLUS_4              2              159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NAP1L2 MUTATED        1      1      1      1
  NAP1L2 WILD-TYPE    184    154    137     94
D111V7, multiclass
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              1              184
  CLUS_2              1              154
  CLUS_3              1              137
  CLUS_4              1               94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NAP1L2 MUTATED        0      3      1
  NAP1L2 WILD-TYPE    205    217    147
D111V8, multiclass
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              0              205
  CLUS_2              3              217
  CLUS_3              1              147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NAP1L2 MUTATED        1      2      2
  NAP1L2 WILD-TYPE    237    189    226
D111V9, multiclass
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              1              237
  CLUS_2              2              189
  CLUS_3              2              226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NAP1L2 MUTATED        1      2      2
  NAP1L2 WILD-TYPE    195    189    268
D111V10, multiclass
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              1              195
  CLUS_2              2              189
  CLUS_3              2              268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NAP1L2 MUTATED        1      1      0      2
  NAP1L2 WILD-TYPE    139    106     83    180
D111V11, multiclass
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              1              139
  CLUS_2              1              106
  CLUS_3              0               83
  CLUS_4              2              180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NAP1L2 MUTATED        2      2      0
  NAP1L2 WILD-TYPE    221    184    103
D111V12, multiclass
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              2              221
  CLUS_2              2              184
  CLUS_3              0              103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NAP1L2 MUTATED        2      0      1      1
  NAP1L2 WILD-TYPE    125    119    105    155
D111V13, multiclass
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              2              125
  CLUS_2              0              119
  CLUS_3              1              105
  CLUS_4              1              155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  NAP1L2 MUTATED        2      0      1      0      0      1
  NAP1L2 WILD-TYPE     97     77    119     57     63     91
D111V14, multiclass
        clus
vv       NAP1L2 MUTATED NAP1L2 WILD-TYPE
  CLUS_1              2               97
  CLUS_2              0               77
  CLUS_3              1              119
  CLUS_4              0               57
  CLUS_5              0               63
  CLUS_6              1               91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(112) Variable = OR52M1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR52M1 MUTATED        2      1      0      1
  OR52M1 WILD-TYPE     76     40     64     56
D112V1, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              2               76
  CLUS_2              1               40
  CLUS_3              0               64
  CLUS_4              1               56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR52M1 MUTATED        1      2      0      1
  OR52M1 WILD-TYPE     62     48     48     78
D112V2, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              1               62
  CLUS_2              2               48
  CLUS_3              0               48
  CLUS_4              1               78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR52M1 MUTATED        0      1      0      3
  OR52M1 WILD-TYPE     70     97     44     60
D112V3, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              0               70
  CLUS_2              1               97
  CLUS_3              0               44
  CLUS_4              3               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR52M1 MUTATED        1      3      0
  OR52M1 WILD-TYPE    137     58     76
D112V4, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              1              137
  CLUS_2              3               58
  CLUS_3              0               76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR52M1 MUTATED        5      2      1
  OR52M1 WILD-TYPE    287    430     61
D112V5, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              5              287
  CLUS_2              2              430
  CLUS_3              1               61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR52M1 MUTATED        2      2      1      0
  OR52M1 WILD-TYPE    151    221     87    161
D112V6, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              2              151
  CLUS_2              2              221
  CLUS_3              1               87
  CLUS_4              0              161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR52M1 MUTATED        2      1      3      0
  OR52M1 WILD-TYPE    183    154    135     95
D112V7, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              2              183
  CLUS_2              1              154
  CLUS_3              3              135
  CLUS_4              0               95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR52M1 MUTATED        3      2      1
  OR52M1 WILD-TYPE    202    218    147
D112V8, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              3              202
  CLUS_2              2              218
  CLUS_3              1              147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR52M1 MUTATED        5      1      1
  OR52M1 WILD-TYPE    233    190    227
D112V9, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              5              233
  CLUS_2              1              190
  CLUS_3              1              227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR52M1 MUTATED        4      2      1
  OR52M1 WILD-TYPE    192    189    269
D112V10, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              4              192
  CLUS_2              2              189
  CLUS_3              1              269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR52M1 MUTATED        2      1      0      1
  OR52M1 WILD-TYPE    138    106     83    181
D112V11, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              2              138
  CLUS_2              1              106
  CLUS_3              0               83
  CLUS_4              1              181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR52M1 MUTATED        2      1      1
  OR52M1 WILD-TYPE    221    185    102
D112V12, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              2              221
  CLUS_2              1              185
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR52M1 MUTATED        1      2      0      1
  OR52M1 WILD-TYPE    126    117    106    155
D112V13, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              1              126
  CLUS_2              2              117
  CLUS_3              0              106
  CLUS_4              1              155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  OR52M1 MUTATED        1      1      1      0      1      0
  OR52M1 WILD-TYPE     98     76    119     57     62     92
D112V14, multiclass
        clus
vv       OR52M1 MUTATED OR52M1 WILD-TYPE
  CLUS_1              1               98
  CLUS_2              1               76
  CLUS_3              1              119
  CLUS_4              0               57
  CLUS_5              1               62
  CLUS_6              0               92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(113) Variable = OAS2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OAS2 MUTATED        1      0      1      1
  OAS2 WILD-TYPE     77     41     63     56
D113V1, multiclass
        clus
vv       OAS2 MUTATED OAS2 WILD-TYPE
  CLUS_1            1             77
  CLUS_2            0             41
  CLUS_3            1             63
  CLUS_4            1             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OAS2 MUTATED        0      1      1      1
  OAS2 WILD-TYPE     63     49     47     78
D113V2, multiclass
        clus
vv       OAS2 MUTATED OAS2 WILD-TYPE
  CLUS_1            0             63
  CLUS_2            1             49
  CLUS_3            1             47
  CLUS_4            1             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OAS2 MUTATED        0      2      0      1
  OAS2 WILD-TYPE     70     96     44     62
D113V3, multiclass
        clus
vv       OAS2 MUTATED OAS2 WILD-TYPE
  CLUS_1            0             70
  CLUS_2            2             96
  CLUS_3            0             44
  CLUS_4            1             62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  OAS2 MUTATED        1      1      1
  OAS2 WILD-TYPE    137     60     75
D113V4, multiclass
        clus
vv       OAS2 MUTATED OAS2 WILD-TYPE
  CLUS_1            1            137
  CLUS_2            1             60
  CLUS_3            1             75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  OAS2 MUTATED        3      1      0
  OAS2 WILD-TYPE    289    431     62
D113V5, multiclass
        clus
vv       OAS2 MUTATED OAS2 WILD-TYPE
  CLUS_1            3            289
  CLUS_2            1            431
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OAS2 MUTATED        1      0      1      0
  OAS2 WILD-TYPE    152    223     87    161
D113V6, multiclass
[1] "Remove cluster labels:" "OAS2 MUTATED"          
clus
  OAS2 MUTATED OAS2 WILD-TYPE 
             2            623 
    TCGA-06-0152     TCGA-06-0650     TCGA-06-1804     TCGA-06-1806 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-12-5295 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-14-0862     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-15-1444     TCGA-19-5947     TCGA-19-5950     TCGA-19-5951 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-19-5952     TCGA-19-5953     TCGA-19-5954     TCGA-19-5955 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-19-5958     TCGA-19-5959     TCGA-19-5960     TCGA-26-1442 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-26-5132     TCGA-26-5133     TCGA-26-5134     TCGA-26-5135 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-26-5136     TCGA-26-5139     TCGA-26-6173     TCGA-26-6174 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-28-2501     TCGA-28-2510     TCGA-28-5204     TCGA-28-5207 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1979 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-5222     TCGA-41-5651     TCGA-41-6646 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-74-6573     TCGA-74-6575     TCGA-74-6577     TCGA-74-6578 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-74-6584     TCGA-76-4925     TCGA-76-4926     TCGA-76-4927 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-76-4928     TCGA-76-4929     TCGA-76-4931     TCGA-76-4932 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-76-4934     TCGA-76-4935     TCGA-76-6191     TCGA-76-6192 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-76-6193     TCGA-76-6280     TCGA-76-6282     TCGA-76-6283 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-76-6285     TCGA-76-6286     TCGA-76-6656     TCGA-76-6657 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-76-6660     TCGA-76-6661     TCGA-76-6662     TCGA-76-6663 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-76-6664     TCGA-81-5910     TCGA-81-5911     TCGA-87-5896 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6665     TCGA-CS-6666     TCGA-CS-6667 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670     TCGA-DB-5270 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275     TCGA-DB-5276 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279     TCGA-DB-5280 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75M     TCGA-DB-A75O 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7011     TCGA-DU-7012 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015     TCGA-DU-7018 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A74J     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6     TCGA-P5-A72U 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A736 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX     TCGA-QH-A6CY 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OAS2 MUTATED        0      0      1      0
  OAS2 WILD-TYPE    185    155    137     95
D113V7, multiclass
[1] "Remove cluster labels:" "OAS2 MUTATED"          
clus
  OAS2 MUTATED OAS2 WILD-TYPE 
             1            572 
    TCGA-02-0003     TCGA-02-2470     TCGA-02-2485     TCGA-06-0126 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-0128     TCGA-06-0129     TCGA-06-0130     TCGA-06-0154 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-0155     TCGA-06-0189     TCGA-06-0238     TCGA-06-0644 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-0650     TCGA-06-0875     TCGA-06-0876     TCGA-06-0877 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-0878     TCGA-06-0879     TCGA-06-0882     TCGA-06-0939 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-1804     TCGA-06-1806     TCGA-06-2557     TCGA-06-2558 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-2559     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2570     TCGA-06-5410 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6388     TCGA-06-6389 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-06-6693     TCGA-06-6694 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-6695     TCGA-06-6697     TCGA-06-6698     TCGA-06-6699 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-6700     TCGA-06-6701     TCGA-08-0386     TCGA-12-0692 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5301     TCGA-14-0813 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-14-0862     TCGA-14-0871     TCGA-14-1823     TCGA-16-0846 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-19-2625     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5953 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-19-5954     TCGA-19-5955     TCGA-19-5958     TCGA-19-5959 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-6173     TCGA-26-6174     TCGA-27-1830 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-2518     TCGA-27-2528     TCGA-28-1747 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2501     TCGA-28-5208     TCGA-28-5214 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-5222     TCGA-41-2573 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-41-2575     TCGA-41-3392     TCGA-41-3393     TCGA-41-3915 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-41-6646     TCGA-74-6573 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-74-6575     TCGA-74-6577     TCGA-74-6578     TCGA-74-6584 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-6192     TCGA-76-6193 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6656 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-CS-4938 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-4942     TCGA-CS-4943     TCGA-CS-4944     TCGA-CS-5390 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-5393     TCGA-CS-5394     TCGA-CS-5396     TCGA-CS-5397 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-6186     TCGA-CS-6188     TCGA-CS-6665     TCGA-CS-6666 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670     TCGA-DB-5270 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275     TCGA-DB-5276 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279     TCGA-DB-5280 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75M     TCGA-DB-A75O 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A66B     TCGA-DH-A66D 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7US     TCGA-DU-5847 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7011     TCGA-DU-7012     TCGA-DU-7013 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7014     TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7TA     TCGA-DU-A7TB 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YQ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z6     TCGA-EZ-7264 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-7634     TCGA-FG-7636 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60L     TCGA-FG-A6IZ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-HT-7467 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8564     TCGA-HT-A4DV 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RB 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74J     TCGA-HT-A74L     TCGA-HT-A74O 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-KT-A74X     TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A5F6     TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A735     TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65S 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X4     TCGA-QH-A6X5 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-RY-A83X     TCGA-RY-A83Y 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-RY-A83Z     TCGA-RY-A843     TCGA-RY-A845     TCGA-S9-A6TS 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TX     TCGA-S9-A6TY 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U5     TCGA-S9-A6U6 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6U9     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WN     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IY     TCGA-S9-A7IZ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2     TCGA-S9-A7QX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R4     TCGA-S9-A7R8 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TQ-A7RF 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RK     TCGA-TQ-A7RN 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RQ     TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RV 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-W9-A837     TCGA-WY-A85B     TCGA-WY-A85C     TCGA-WY-A85D 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  OAS2 MUTATED        0      1      0
  OAS2 WILD-TYPE    205    219    148
D113V8, multiclass
[1] "Remove cluster labels:" "OAS2 MUTATED"          
clus
  OAS2 MUTATED OAS2 WILD-TYPE 
             1            572 
    TCGA-02-0003     TCGA-02-2470     TCGA-02-2485     TCGA-06-0126 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-0128     TCGA-06-0129     TCGA-06-0130     TCGA-06-0154 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-0155     TCGA-06-0189     TCGA-06-0238     TCGA-06-0644 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-0650     TCGA-06-0875     TCGA-06-0876     TCGA-06-0877 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-0878     TCGA-06-0879     TCGA-06-0882     TCGA-06-0939 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-1804     TCGA-06-1806     TCGA-06-2557     TCGA-06-2558 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-2559     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2570     TCGA-06-5410 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6388     TCGA-06-6389 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-06-6693     TCGA-06-6694 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-6695     TCGA-06-6697     TCGA-06-6698     TCGA-06-6699 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-06-6700     TCGA-06-6701     TCGA-08-0386     TCGA-12-0692 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5301     TCGA-14-0813 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-14-0862     TCGA-14-0871     TCGA-14-1823     TCGA-16-0846 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-19-2625     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5953 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-19-5954     TCGA-19-5955     TCGA-19-5958     TCGA-19-5959 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-6173     TCGA-26-6174     TCGA-27-1830 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-2518     TCGA-27-2528     TCGA-28-1747 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2501     TCGA-28-5208     TCGA-28-5214 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-5222     TCGA-41-2573 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-41-2575     TCGA-41-3392     TCGA-41-3393     TCGA-41-3915 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-41-6646     TCGA-74-6573 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-74-6575     TCGA-74-6577     TCGA-74-6578     TCGA-74-6584 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-6192     TCGA-76-6193 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6656 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-CS-4938 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-4942     TCGA-CS-4943     TCGA-CS-4944     TCGA-CS-5390 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-5393     TCGA-CS-5394     TCGA-CS-5396     TCGA-CS-5397 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-6186     TCGA-CS-6188     TCGA-CS-6665     TCGA-CS-6666 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670     TCGA-DB-5270 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275     TCGA-DB-5276 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279     TCGA-DB-5280 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75M     TCGA-DB-A75O 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A66B     TCGA-DH-A66D 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7US     TCGA-DU-5847 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7011     TCGA-DU-7012     TCGA-DU-7013 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7014     TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7TA     TCGA-DU-A7TB 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YQ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z6     TCGA-EZ-7264 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-7634     TCGA-FG-7636 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60L     TCGA-FG-A6IZ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-HT-7467 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8564     TCGA-HT-A4DV 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RB 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74J     TCGA-HT-A74L     TCGA-HT-A74O 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-KT-A74X     TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A5F6     TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A735     TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65S 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X4     TCGA-QH-A6X5 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-RY-A83X     TCGA-RY-A83Y 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-RY-A83Z     TCGA-RY-A843     TCGA-RY-A845     TCGA-S9-A6TS 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TX     TCGA-S9-A6TY 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U5     TCGA-S9-A6U6 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6U9     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WN     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IY     TCGA-S9-A7IZ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2     TCGA-S9-A7QX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R4     TCGA-S9-A7R8 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TQ-A7RF 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RK     TCGA-TQ-A7RN 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RQ     TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RV 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-W9-A837     TCGA-WY-A85B     TCGA-WY-A85C     TCGA-WY-A85D 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  OAS2 MUTATED        3      0      1
  OAS2 WILD-TYPE    235    191    227
D113V9, multiclass
        clus
vv       OAS2 MUTATED OAS2 WILD-TYPE
  CLUS_1            3            235
  CLUS_2            0            191
  CLUS_3            1            227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  OAS2 MUTATED        3      1      0
  OAS2 WILD-TYPE    193    190    270
D113V10, multiclass
        clus
vv       OAS2 MUTATED OAS2 WILD-TYPE
  CLUS_1            3            193
  CLUS_2            1            190
  CLUS_3            0            270
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OAS2 MUTATED        1      0      0      0
  OAS2 WILD-TYPE    139    107     83    182
D113V11, multiclass
[1] "Remove cluster labels:" "OAS2 MUTATED"          
clus
  OAS2 MUTATED OAS2 WILD-TYPE 
             1            511 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6665     TCGA-CS-6666     TCGA-CS-6667 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670     TCGA-DB-5270 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275     TCGA-DB-5276 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279     TCGA-DB-5280 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A7T8     TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  OAS2 MUTATED        1      0      0
  OAS2 WILD-TYPE    222    186    103
D113V12, multiclass
[1] "Remove cluster labels:" "OAS2 MUTATED"          
clus
  OAS2 MUTATED OAS2 WILD-TYPE 
             1            511 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6665     TCGA-CS-6666     TCGA-CS-6667 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670     TCGA-DB-5270 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275     TCGA-DB-5276 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279     TCGA-DB-5280 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A7T8     TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OAS2 MUTATED        1      0      0      0
  OAS2 WILD-TYPE    126    119    106    156
D113V13, multiclass
[1] "Remove cluster labels:" "OAS2 MUTATED"          
clus
  OAS2 MUTATED OAS2 WILD-TYPE 
             1            507 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6665     TCGA-CS-6666     TCGA-CS-6667 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670     TCGA-DB-5270 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275     TCGA-DB-5276 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279     TCGA-DB-5281 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB     TCGA-DB-A4XC 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF     TCGA-DB-A4XG 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O     TCGA-DB-A64P 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S     TCGA-DB-A64U 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X     TCGA-DB-A75K 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393     TCGA-DU-6394 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  OAS2 MUTATED        0      0      0      0      0      1
  OAS2 WILD-TYPE     99     77    120     57     63     91
D113V14, multiclass
[1] "Remove cluster labels:" "OAS2 MUTATED"          
clus
  OAS2 MUTATED OAS2 WILD-TYPE 
             1            507 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6665     TCGA-CS-6666     TCGA-CS-6667 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670     TCGA-DB-5270 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275     TCGA-DB-5276 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279     TCGA-DB-5281 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB     TCGA-DB-A4XC 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF     TCGA-DB-A4XG 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O     TCGA-DB-A64P 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S     TCGA-DB-A64U 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X     TCGA-DB-A75K 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393     TCGA-DU-6394 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"OAS2 WILD-TYPE" "OAS2 WILD-TYPE" "OAS2 WILD-TYPE" 

Clustering(114) Variable = FMR1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FMR1 MUTATED        0      0      0      0
  FMR1 WILD-TYPE     78     41     64     57
D114V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FMR1 MUTATED        0      0      0      0
  FMR1 WILD-TYPE     63     50     48     79
D114V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FMR1 MUTATED        0      0      0      0
  FMR1 WILD-TYPE     70     98     44     63
D114V3, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FMR1 MUTATED        0      0      0
  FMR1 WILD-TYPE    138     61     76
D114V4, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FMR1 MUTATED        1      4      0
  FMR1 WILD-TYPE    291    428     62
D114V5, multiclass
        clus
vv       FMR1 MUTATED FMR1 WILD-TYPE
  CLUS_1            1            291
  CLUS_2            4            428
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FMR1 MUTATED        1      2      2      0
  FMR1 WILD-TYPE    152    221     86    161
D114V6, multiclass
        clus
vv       FMR1 MUTATED FMR1 WILD-TYPE
  CLUS_1            1            152
  CLUS_2            2            221
  CLUS_3            2             86
  CLUS_4            0            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FMR1 MUTATED        1      1      1      2
  FMR1 WILD-TYPE    184    154    137     93
D114V7, multiclass
        clus
vv       FMR1 MUTATED FMR1 WILD-TYPE
  CLUS_1            1            184
  CLUS_2            1            154
  CLUS_3            1            137
  CLUS_4            2             93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FMR1 MUTATED        2      2      1
  FMR1 WILD-TYPE    203    218    147
D114V8, multiclass
        clus
vv       FMR1 MUTATED FMR1 WILD-TYPE
  CLUS_1            2            203
  CLUS_2            2            218
  CLUS_3            1            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FMR1 MUTATED        3      0      2
  FMR1 WILD-TYPE    235    191    226
D114V9, multiclass
        clus
vv       FMR1 MUTATED FMR1 WILD-TYPE
  CLUS_1            3            235
  CLUS_2            0            191
  CLUS_3            2            226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FMR1 MUTATED        0      5      0
  FMR1 WILD-TYPE    196    186    270
D114V10, multiclass
        clus
vv       FMR1 MUTATED FMR1 WILD-TYPE
  CLUS_1            0            196
  CLUS_2            5            186
  CLUS_3            0            270
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FMR1 MUTATED        1      3      0      1
  FMR1 WILD-TYPE    139    104     83    181
D114V11, multiclass
        clus
vv       FMR1 MUTATED FMR1 WILD-TYPE
  CLUS_1            1            139
  CLUS_2            3            104
  CLUS_3            0             83
  CLUS_4            1            181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FMR1 MUTATED        1      2      2
  FMR1 WILD-TYPE    222    184    101
D114V12, multiclass
        clus
vv       FMR1 MUTATED FMR1 WILD-TYPE
  CLUS_1            1            222
  CLUS_2            2            184
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FMR1 MUTATED        1      2      0      2
  FMR1 WILD-TYPE    126    117    106    154
D114V13, multiclass
        clus
vv       FMR1 MUTATED FMR1 WILD-TYPE
  CLUS_1            1            126
  CLUS_2            2            117
  CLUS_3            0            106
  CLUS_4            2            154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  FMR1 MUTATED        1      2      0      0      0      2
  FMR1 WILD-TYPE     98     75    120     57     63     90
D114V14, multiclass
        clus
vv       FMR1 MUTATED FMR1 WILD-TYPE
  CLUS_1            1             98
  CLUS_2            2             75
  CLUS_3            0            120
  CLUS_4            0             57
  CLUS_5            0             63
  CLUS_6            2             90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(115) Variable = INF2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INF2 MUTATED        0      0      0      1
  INF2 WILD-TYPE     78     41     64     56
D115V1, multiclass
[1] "Remove cluster labels:" "INF2 MUTATED"          
clus
  INF2 MUTATED INF2 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0238     TCGA-06-0240 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-2557 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INF2 MUTATED        0      0      0      1
  INF2 WILD-TYPE     63     50     48     78
D115V2, multiclass
[1] "Remove cluster labels:" "INF2 MUTATED"          
clus
  INF2 MUTATED INF2 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0238     TCGA-06-0240 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-2557 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INF2 MUTATED        0      1      0      0
  INF2 WILD-TYPE     70     97     44     63
D115V3, multiclass
[1] "Remove cluster labels:" "INF2 MUTATED"          
clus
  INF2 MUTATED INF2 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0238     TCGA-06-0240 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-1806 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  INF2 MUTATED        1      0      0
  INF2 WILD-TYPE    137     61     76
D115V4, multiclass
[1] "Remove cluster labels:" "INF2 MUTATED"          
clus
  INF2 MUTATED INF2 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0238     TCGA-06-0240 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0241     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0648     TCGA-06-0649     TCGA-06-0650     TCGA-06-0686 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0743     TCGA-06-0744     TCGA-06-0745     TCGA-06-0747 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0749     TCGA-06-0750     TCGA-06-0875     TCGA-06-0876 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0877     TCGA-06-0878     TCGA-06-0879     TCGA-06-0881 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-0882     TCGA-06-0939     TCGA-06-1804     TCGA-06-1806 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" "INF2 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"INF2 WILD-TYPE" "INF2 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  INF2 MUTATED        2      2      0
  INF2 WILD-TYPE    290    430     62
D115V5, multiclass
        clus
vv       INF2 MUTATED INF2 WILD-TYPE
  CLUS_1            2            290
  CLUS_2            2            430
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INF2 MUTATED        1      1      0      1
  INF2 WILD-TYPE    152    222     88    160
D115V6, multiclass
        clus
vv       INF2 MUTATED INF2 WILD-TYPE
  CLUS_1            1            152
  CLUS_2            1            222
  CLUS_3            0             88
  CLUS_4            1            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INF2 MUTATED        1      0      1      1
  INF2 WILD-TYPE    184    155    137     94
D115V7, multiclass
        clus
vv       INF2 MUTATED INF2 WILD-TYPE
  CLUS_1            1            184
  CLUS_2            0            155
  CLUS_3            1            137
  CLUS_4            1             94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  INF2 MUTATED        1      1      1
  INF2 WILD-TYPE    204    219    147
D115V8, multiclass
        clus
vv       INF2 MUTATED INF2 WILD-TYPE
  CLUS_1            1            204
  CLUS_2            1            219
  CLUS_3            1            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  INF2 MUTATED        2      1      0
  INF2 WILD-TYPE    236    190    228
D115V9, multiclass
        clus
vv       INF2 MUTATED INF2 WILD-TYPE
  CLUS_1            2            236
  CLUS_2            1            190
  CLUS_3            0            228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  INF2 MUTATED        1      1      1
  INF2 WILD-TYPE    195    190    269
D115V10, multiclass
        clus
vv       INF2 MUTATED INF2 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            1            190
  CLUS_3            1            269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INF2 MUTATED        1      1      0      1
  INF2 WILD-TYPE    139    106     83    181
D115V11, multiclass
        clus
vv       INF2 MUTATED INF2 WILD-TYPE
  CLUS_1            1            139
  CLUS_2            1            106
  CLUS_3            0             83
  CLUS_4            1            181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  INF2 MUTATED        0      1      2
  INF2 WILD-TYPE    223    185    101
D115V12, multiclass
        clus
vv       INF2 MUTATED INF2 WILD-TYPE
  CLUS_1            0            223
  CLUS_2            1            185
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INF2 MUTATED        1      1      0      1
  INF2 WILD-TYPE    126    118    106    155
D115V13, multiclass
        clus
vv       INF2 MUTATED INF2 WILD-TYPE
  CLUS_1            1            126
  CLUS_2            1            118
  CLUS_3            0            106
  CLUS_4            1            155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  INF2 MUTATED        0      1      1      0      1      0
  INF2 WILD-TYPE     99     76    119     57     62     92
D115V14, multiclass
        clus
vv       INF2 MUTATED INF2 WILD-TYPE
  CLUS_1            0             99
  CLUS_2            1             76
  CLUS_3            1            119
  CLUS_4            0             57
  CLUS_5            1             62
  CLUS_6            0             92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(116) Variable = EPS8L1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPS8L1 MUTATED        0      0      0      1
  EPS8L1 WILD-TYPE     78     41     64     56
D116V1, multiclass
[1] "Remove cluster labels:" "EPS8L1 MUTATED"        
clus
  EPS8L1 MUTATED EPS8L1 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2629       TCGA-19-2631       TCGA-19-4068 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-26-5139       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-2501       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5213       TCGA-28-5214 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2638       TCGA-32-4208 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPS8L1 MUTATED        0      1      0      0
  EPS8L1 WILD-TYPE     63     49     48     79
D116V2, multiclass
[1] "Remove cluster labels:" "EPS8L1 MUTATED"        
clus
  EPS8L1 MUTATED EPS8L1 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2629       TCGA-19-2631       TCGA-19-4068 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-26-5139       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-2501       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5213       TCGA-28-5214 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2638       TCGA-32-4208 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPS8L1 MUTATED        0      1      0      1
  EPS8L1 WILD-TYPE     70     97     44     62
D116V3, multiclass
[1] "Remove cluster labels:" "EPS8L1 MUTATED"        
clus
  EPS8L1 MUTATED EPS8L1 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0862 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1043       TCGA-14-1395       TCGA-14-1450 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5953 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-26-5139       TCGA-26-6173       TCGA-26-6174       TCGA-27-1830 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2502       TCGA-28-2509 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-2510       TCGA-28-2513       TCGA-28-2514       TCGA-28-5204 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5211 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-41-5651       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-87-5896 
"EPS8L1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EPS8L1 MUTATED        2      0      0
  EPS8L1 WILD-TYPE    136     61     76
D116V4, multiclass
[1] "Remove cluster labels:" "EPS8L1 MUTATED"        
clus
  EPS8L1 MUTATED EPS8L1 WILD-TYPE 
               2              273 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0862 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1043       TCGA-14-1395       TCGA-14-1450 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5953 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-26-5139       TCGA-26-6173       TCGA-26-6174       TCGA-27-1830 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2502       TCGA-28-2509 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-2510       TCGA-28-2513       TCGA-28-2514       TCGA-28-5204 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5211 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-41-5651       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-87-5896 
"EPS8L1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EPS8L1 MUTATED        3      1      0
  EPS8L1 WILD-TYPE    289    431     62
D116V5, multiclass
        clus
vv       EPS8L1 MUTATED EPS8L1 WILD-TYPE
  CLUS_1              3              289
  CLUS_2              1              431
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPS8L1 MUTATED        2      1      0      0
  EPS8L1 WILD-TYPE    151    222     88    161
D116V6, multiclass
        clus
vv       EPS8L1 MUTATED EPS8L1 WILD-TYPE
  CLUS_1              2              151
  CLUS_2              1              222
  CLUS_3              0               88
  CLUS_4              0              161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPS8L1 MUTATED        3      0      0      0
  EPS8L1 WILD-TYPE    182    155    138     95
D116V7, multiclass
        clus
vv       EPS8L1 MUTATED EPS8L1 WILD-TYPE
  CLUS_1              3              182
  CLUS_2              0              155
  CLUS_3              0              138
  CLUS_4              0               95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EPS8L1 MUTATED        3      0      0
  EPS8L1 WILD-TYPE    202    220    148
D116V8, multiclass
        clus
vv       EPS8L1 MUTATED EPS8L1 WILD-TYPE
  CLUS_1              3              202
  CLUS_2              0              220
  CLUS_3              0              148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EPS8L1 MUTATED        2      1      0
  EPS8L1 WILD-TYPE    236    190    228
D116V9, multiclass
        clus
vv       EPS8L1 MUTATED EPS8L1 WILD-TYPE
  CLUS_1              2              236
  CLUS_2              1              190
  CLUS_3              0              228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EPS8L1 MUTATED        1      1      1
  EPS8L1 WILD-TYPE    195    190    269
D116V10, multiclass
        clus
vv       EPS8L1 MUTATED EPS8L1 WILD-TYPE
  CLUS_1              1              195
  CLUS_2              1              190
  CLUS_3              1              269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPS8L1 MUTATED        0      1      0      1
  EPS8L1 WILD-TYPE    140    106     83    181
D116V11, multiclass
[1] "Remove cluster labels:" "EPS8L1 MUTATED"        
clus
  EPS8L1 MUTATED EPS8L1 WILD-TYPE 
               2              510 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5394       TCGA-CS-5395 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186       TCGA-CS-6188 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666       TCGA-CS-6667 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670       TCGA-DB-5270 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275       TCGA-DB-5276 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279       TCGA-DB-5280 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6393       TCGA-DU-6394 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7014       TCGA-DU-7015 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TI       TCGA-DU-A7TJ       TCGA-E1-5302 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-A74H       TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HW-7491       TCGA-HW-7493       TCGA-HW-7495       TCGA-HW-8319 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW       TCGA-P5-A5EX 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6       TCGA-P5-A72U 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A736 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X       TCGA-P5-A780 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S       TCGA-QH-A65V 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS       TCGA-QH-A6CU 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-QH-A6CV       TCGA-QH-A6CX       TCGA-QH-A6CY       TCGA-QH-A6CZ 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X       TCGA-RY-A83Y 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843       TCGA-RY-A845 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU       TCGA-S9-A6TV 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6TZ 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2       TCGA-S9-A6U5 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6U9       TCGA-S9-A6UA 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE       TCGA-S9-A6WG 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL       TCGA-S9-A6WM 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP       TCGA-S9-A6WQ 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX       TCGA-S9-A7IY 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1       TCGA-S9-A7J2 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX       TCGA-S9-A7QY 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2       TCGA-S9-A7R3 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8       TCGA-S9-A89V 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4       TCGA-TM-A7C5 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B       TCGA-TM-A84C 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H       TCGA-TM-A84I 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M       TCGA-TM-A84O 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S       TCGA-TM-A84T 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH       TCGA-TQ-A7RI 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM       TCGA-TQ-A7RN 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ       TCGA-TQ-A7RR 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV       TCGA-TQ-A7RW 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9       TCGA-VM-A8CA 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE       TCGA-VM-A8CF 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M       TCGA-VW-A7QS 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K       TCGA-WY-A858 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B       TCGA-WY-A85C 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-WY-A85D       TCGA-WY-A85E 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EPS8L1 MUTATED        0      1      1
  EPS8L1 WILD-TYPE    223    185    102
D116V12, multiclass
[1] "Remove cluster labels:" "EPS8L1 MUTATED"        
clus
  EPS8L1 MUTATED EPS8L1 WILD-TYPE 
               2              510 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5394       TCGA-CS-5395 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186       TCGA-CS-6188 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666       TCGA-CS-6667 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670       TCGA-DB-5270 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275       TCGA-DB-5276 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279       TCGA-DB-5280 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6393       TCGA-DU-6394 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7014       TCGA-DU-7015 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TI       TCGA-DU-A7TJ       TCGA-E1-5302 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-A74H       TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HW-7491       TCGA-HW-7493       TCGA-HW-7495       TCGA-HW-8319 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW       TCGA-P5-A5EX 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6       TCGA-P5-A72U 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A736 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X       TCGA-P5-A780 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S       TCGA-QH-A65V 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS       TCGA-QH-A6CU 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-QH-A6CV       TCGA-QH-A6CX       TCGA-QH-A6CY       TCGA-QH-A6CZ 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X       TCGA-RY-A83Y 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843       TCGA-RY-A845 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU       TCGA-S9-A6TV 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6TZ 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2       TCGA-S9-A6U5 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6U9       TCGA-S9-A6UA 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE       TCGA-S9-A6WG 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL       TCGA-S9-A6WM 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP       TCGA-S9-A6WQ 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX       TCGA-S9-A7IY 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1       TCGA-S9-A7J2 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX       TCGA-S9-A7QY 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2       TCGA-S9-A7R3 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8       TCGA-S9-A89V 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4       TCGA-TM-A7C5 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B       TCGA-TM-A84C 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H       TCGA-TM-A84I 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M       TCGA-TM-A84O 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S       TCGA-TM-A84T 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH       TCGA-TQ-A7RI 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM       TCGA-TQ-A7RN 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ       TCGA-TQ-A7RR 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV       TCGA-TQ-A7RW 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9       TCGA-VM-A8CA 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE       TCGA-VM-A8CF 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M       TCGA-VW-A7QS 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K       TCGA-WY-A858 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B       TCGA-WY-A85C 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-WY-A85D       TCGA-WY-A85E 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPS8L1 MUTATED        0      0      0      2
  EPS8L1 WILD-TYPE    127    119    106    154
D116V13, multiclass
[1] "Remove cluster labels:" "EPS8L1 MUTATED"        
clus
  EPS8L1 MUTATED EPS8L1 WILD-TYPE 
               2              506 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5394       TCGA-CS-5395 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186       TCGA-CS-6188 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666       TCGA-CS-6667 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670       TCGA-DB-5270 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275       TCGA-DB-5276 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279       TCGA-DB-5281 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB       TCGA-DB-A4XC 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF       TCGA-DB-A4XG 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O       TCGA-DB-A64P 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S       TCGA-DB-A64U 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X       TCGA-DB-A75K 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P       TCGA-DH-5140 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143       TCGA-DH-5144 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D       TCGA-DH-A66F 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US       TCGA-DH-A7UT 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847       TCGA-DU-5849 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853       TCGA-DU-5854 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871       TCGA-DU-5872 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-5874       TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7012 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-7013       TCGA-DU-7014       TCGA-DU-7015       TCGA-DU-7018 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A7TI       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HW-7493       TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A5EV       TCGA-P5-A5EW       TCGA-P5-A5EX       TCGA-P5-A5EY 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1       TCGA-P5-A5F2 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A5F4       TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A735       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX       TCGA-QH-A6CY 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6UA 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE       TCGA-S9-A6WG 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL       TCGA-S9-A6WM 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP       TCGA-S9-A6WQ 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX       TCGA-S9-A7IY 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1       TCGA-S9-A7J2 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX       TCGA-S9-A7QY 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2       TCGA-S9-A7R3 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8       TCGA-S9-A89V 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4       TCGA-TM-A7C5 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B       TCGA-TM-A84C 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H       TCGA-TM-A84I 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M       TCGA-TM-A84O 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S       TCGA-TM-A84T 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH       TCGA-TQ-A7RI 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM       TCGA-TQ-A7RN 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ       TCGA-TQ-A7RR 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV       TCGA-TQ-A7RW 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9       TCGA-VM-A8CA 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE       TCGA-VM-A8CF 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M       TCGA-VW-A7QS 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K       TCGA-WY-A858 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B       TCGA-WY-A85C 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-WY-A85D       TCGA-WY-A85E 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  EPS8L1 MUTATED        0      0      1      0      0      1
  EPS8L1 WILD-TYPE     99     77    119     57     63     91
D116V14, multiclass
[1] "Remove cluster labels:" "EPS8L1 MUTATED"        
clus
  EPS8L1 MUTATED EPS8L1 WILD-TYPE 
               2              506 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5394       TCGA-CS-5395 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186       TCGA-CS-6188 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666       TCGA-CS-6667 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670       TCGA-DB-5270 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275       TCGA-DB-5276 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279       TCGA-DB-5281 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB       TCGA-DB-A4XC 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF       TCGA-DB-A4XG 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O       TCGA-DB-A64P 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S       TCGA-DB-A64U 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X       TCGA-DB-A75K 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P       TCGA-DH-5140 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143       TCGA-DH-5144 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D       TCGA-DH-A66F 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US       TCGA-DH-A7UT 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847       TCGA-DU-5849 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853       TCGA-DU-5854 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871       TCGA-DU-5872 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-5874       TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7012 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-7013       TCGA-DU-7014       TCGA-DU-7015       TCGA-DU-7018 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-7019       TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-7298       TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A6S8       TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A76R       TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A7TB       TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-DU-A7TI       TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-A7YE       TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-A7YK       TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-A7YO       TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-F6-A8O3       TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-5964       TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-6690       TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-7636       TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-7643       TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-8186       TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-8191       TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-A4MX       TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-FG-A713       TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7467       TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7471       TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7475       TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7479       TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7483       TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7603       TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7607       TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7611       TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7677       TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7686       TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7690       TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7694       TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7856       TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7873       TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7879       TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-7884       TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-8012       TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-8019       TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-8107       TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-8563       TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-A5R5       TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-A5RB       TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HT-A74K       TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HW-7493       TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-HW-A5KL       TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-KT-A74X       TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A5EV       TCGA-P5-A5EW       TCGA-P5-A5EX       TCGA-P5-A5EY 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1       TCGA-P5-A5F2 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A5F4       TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A735       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX       TCGA-QH-A6CY 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6UA 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE       TCGA-S9-A6WG 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL       TCGA-S9-A6WM 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP       TCGA-S9-A6WQ 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX       TCGA-S9-A7IY 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1       TCGA-S9-A7J2 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX       TCGA-S9-A7QY 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2       TCGA-S9-A7R3 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8       TCGA-S9-A89V 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4       TCGA-TM-A7C5 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B       TCGA-TM-A84C 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H       TCGA-TM-A84I 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M       TCGA-TM-A84O 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S       TCGA-TM-A84T 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TQ-A7RF       TCGA-TQ-A7RG       TCGA-TQ-A7RH       TCGA-TQ-A7RI 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM       TCGA-TQ-A7RN 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ       TCGA-TQ-A7RR 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV       TCGA-TQ-A7RW 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9       TCGA-VM-A8CA 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE       TCGA-VM-A8CF 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M       TCGA-VW-A7QS 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K       TCGA-WY-A858 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B       TCGA-WY-A85C 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 
      TCGA-WY-A85D       TCGA-WY-A85E 
"EPS8L1 WILD-TYPE" "EPS8L1 WILD-TYPE" 

Clustering(117) Variable = CD209 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD209 MUTATED        1      0      2      1
  CD209 WILD-TYPE     77     41     62     56
D117V1, multiclass
        clus
vv       CD209 MUTATED CD209 WILD-TYPE
  CLUS_1             1              77
  CLUS_2             0              41
  CLUS_3             2              62
  CLUS_4             1              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD209 MUTATED        1      1      1      1
  CD209 WILD-TYPE     62     49     47     78
D117V2, multiclass
        clus
vv       CD209 MUTATED CD209 WILD-TYPE
  CLUS_1             1              62
  CLUS_2             1              49
  CLUS_3             1              47
  CLUS_4             1              78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD209 MUTATED        1      1      0      3
  CD209 WILD-TYPE     69     97     44     60
D117V3, multiclass
        clus
vv       CD209 MUTATED CD209 WILD-TYPE
  CLUS_1             1              69
  CLUS_2             1              97
  CLUS_3             0              44
  CLUS_4             3              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CD209 MUTATED        3      0      2
  CD209 WILD-TYPE    135     61     74
D117V4, multiclass
        clus
vv       CD209 MUTATED CD209 WILD-TYPE
  CLUS_1             3             135
  CLUS_2             0              61
  CLUS_3             2              74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CD209 MUTATED        6      2      1
  CD209 WILD-TYPE    286    430     61
D117V5, multiclass
        clus
vv       CD209 MUTATED CD209 WILD-TYPE
  CLUS_1             6             286
  CLUS_2             2             430
  CLUS_3             1              61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD209 MUTATED        4      2      2      0
  CD209 WILD-TYPE    149    221     86    161
D117V6, multiclass
        clus
vv       CD209 MUTATED CD209 WILD-TYPE
  CLUS_1             4             149
  CLUS_2             2             221
  CLUS_3             2              86
  CLUS_4             0             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD209 MUTATED        4      0      5      0
  CD209 WILD-TYPE    181    155    133     95
D117V7, multiclass
        clus
vv       CD209 MUTATED CD209 WILD-TYPE
  CLUS_1             4             181
  CLUS_2             0             155
  CLUS_3             5             133
  CLUS_4             0              95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CD209 MUTATED        2      6      1
  CD209 WILD-TYPE    203    214    147
D117V8, multiclass
        clus
vv       CD209 MUTATED CD209 WILD-TYPE
  CLUS_1             2             203
  CLUS_2             6             214
  CLUS_3             1             147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CD209 MUTATED        5      0      2
  CD209 WILD-TYPE    233    191    226
D117V9, multiclass
        clus
vv       CD209 MUTATED CD209 WILD-TYPE
  CLUS_1             5             233
  CLUS_2             0             191
  CLUS_3             2             226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CD209 MUTATED        5      2      0
  CD209 WILD-TYPE    191    189    270
D117V10, multiclass
        clus
vv       CD209 MUTATED CD209 WILD-TYPE
  CLUS_1             5             191
  CLUS_2             2             189
  CLUS_3             0             270
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD209 MUTATED        2      2      1      0
  CD209 WILD-TYPE    138    105     82    182
D117V11, multiclass
        clus
vv       CD209 MUTATED CD209 WILD-TYPE
  CLUS_1             2             138
  CLUS_2             2             105
  CLUS_3             1              82
  CLUS_4             0             182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CD209 MUTATED        1      1      3
  CD209 WILD-TYPE    222    185    100
D117V12, multiclass
        clus
vv       CD209 MUTATED CD209 WILD-TYPE
  CLUS_1             1             222
  CLUS_2             1             185
  CLUS_3             3             100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD209 MUTATED        1      2      1      0
  CD209 WILD-TYPE    126    117    105    156
D117V13, multiclass
        clus
vv       CD209 MUTATED CD209 WILD-TYPE
  CLUS_1             1             126
  CLUS_2             2             117
  CLUS_3             1             105
  CLUS_4             0             156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  CD209 MUTATED        0      0      0      1      3      0
  CD209 WILD-TYPE     99     77    120     56     60     92
D117V14, multiclass
        clus
vv       CD209 MUTATED CD209 WILD-TYPE
  CLUS_1             0              99
  CLUS_2             0              77
  CLUS_3             0             120
  CLUS_4             1              56
  CLUS_5             3              60
  CLUS_6             0              92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(118) Variable = TNFRSF9 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFRSF9 MUTATED        0      0      1      0
  TNFRSF9 WILD-TYPE     78     41     63     57
D118V1, multiclass
[1] "Remove cluster labels:" "TNFRSF9 MUTATED"       
clus
  TNFRSF9 MUTATED TNFRSF9 WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6389 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-6390        TCGA-06-6391        TCGA-08-0386        TCGA-12-0616 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-0618        TCGA-12-0619        TCGA-12-0688        TCGA-12-0692 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-0821        TCGA-12-1597        TCGA-12-3649        TCGA-12-3650 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-3652        TCGA-12-3653        TCGA-12-5295        TCGA-12-5299 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-5301        TCGA-14-0781        TCGA-14-0786        TCGA-14-0787 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-0789        TCGA-14-0790        TCGA-14-0813        TCGA-14-0817 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1456        TCGA-14-1823        TCGA-14-1825 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-1829        TCGA-14-2554        TCGA-14-3476        TCGA-14-4157 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-15-0742        TCGA-15-1444        TCGA-16-0846        TCGA-16-0861 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-16-1045        TCGA-16-1048        TCGA-19-1390        TCGA-19-1790 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-2619        TCGA-19-2620        TCGA-19-2623        TCGA-19-2624 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-2625        TCGA-19-2629        TCGA-19-2631        TCGA-19-4068 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-5947        TCGA-19-5950        TCGA-19-5951        TCGA-19-5952 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1835        TCGA-27-1836        TCGA-27-1837 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-1838        TCGA-27-2518        TCGA-27-2519        TCGA-27-2521 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2527 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-2528        TCGA-28-1747        TCGA-28-1753        TCGA-28-2501 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFRSF9 MUTATED        0      0      1      0
  TNFRSF9 WILD-TYPE     63     50     47     79
D118V2, multiclass
[1] "Remove cluster labels:" "TNFRSF9 MUTATED"       
clus
  TNFRSF9 MUTATED TNFRSF9 WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6389 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-6390        TCGA-06-6391        TCGA-08-0386        TCGA-12-0616 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-0618        TCGA-12-0619        TCGA-12-0688        TCGA-12-0692 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-0821        TCGA-12-1597        TCGA-12-3649        TCGA-12-3650 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-3652        TCGA-12-3653        TCGA-12-5295        TCGA-12-5299 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-5301        TCGA-14-0781        TCGA-14-0786        TCGA-14-0787 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-0789        TCGA-14-0790        TCGA-14-0813        TCGA-14-0817 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1456        TCGA-14-1823        TCGA-14-1825 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-1829        TCGA-14-2554        TCGA-14-3476        TCGA-14-4157 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-15-0742        TCGA-15-1444        TCGA-16-0846        TCGA-16-0861 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-16-1045        TCGA-16-1048        TCGA-19-1390        TCGA-19-1790 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-2619        TCGA-19-2620        TCGA-19-2623        TCGA-19-2624 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-2625        TCGA-19-2629        TCGA-19-2631        TCGA-19-4068 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-5947        TCGA-19-5950        TCGA-19-5951        TCGA-19-5952 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1835        TCGA-27-1836        TCGA-27-1837 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-1838        TCGA-27-2518        TCGA-27-2519        TCGA-27-2521 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-2523        TCGA-27-2524        TCGA-27-2526        TCGA-27-2527 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-2528        TCGA-28-1747        TCGA-28-1753        TCGA-28-2501 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFRSF9 MUTATED        1      0      0      0
  TNFRSF9 WILD-TYPE     69     98     44     63
D118V3, multiclass
[1] "Remove cluster labels:" "TNFRSF9 MUTATED"       
clus
  TNFRSF9 MUTATED TNFRSF9 WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-1806        TCGA-06-2557        TCGA-06-2558        TCGA-06-2559 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-2561        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2569        TCGA-06-2570 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5414        TCGA-06-5415        TCGA-06-5417 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5418        TCGA-06-5856        TCGA-06-5858        TCGA-06-5859 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-6388        TCGA-06-6389        TCGA-06-6390        TCGA-06-6391 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-6693        TCGA-06-6694        TCGA-06-6695        TCGA-06-6697 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-6698        TCGA-06-6699        TCGA-06-6700        TCGA-06-6701 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-08-0386        TCGA-12-0616        TCGA-12-0618        TCGA-12-0619 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-0688        TCGA-12-0692        TCGA-12-0821        TCGA-12-1597 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-3649        TCGA-12-3650        TCGA-12-3652        TCGA-12-3653 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-5295        TCGA-12-5299        TCGA-12-5301        TCGA-14-0740 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0862 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1043        TCGA-14-1395        TCGA-14-1450 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5953 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1830        TCGA-27-1831 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-1832        TCGA-27-1833        TCGA-27-1834        TCGA-27-1835 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-1836        TCGA-27-1837        TCGA-27-1838        TCGA-27-2518 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-2519        TCGA-27-2521        TCGA-27-2523        TCGA-27-2524 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-2526        TCGA-27-2527        TCGA-27-2528        TCGA-28-1747 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-1753        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5207 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5211        TCGA-28-5213 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-5214        TCGA-28-5215        TCGA-28-5216        TCGA-28-5218 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-5219        TCGA-28-5220        TCGA-28-6450        TCGA-32-1970 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-1977        TCGA-32-1979        TCGA-32-1980        TCGA-32-1982 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-1986        TCGA-32-1991        TCGA-32-2491        TCGA-32-2494 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-2495        TCGA-32-2615        TCGA-32-2632        TCGA-32-2634 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-2638        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFRSF9 MUTATED        0      0      1
  TNFRSF9 WILD-TYPE    138     61     75
D118V4, multiclass
[1] "Remove cluster labels:" "TNFRSF9 MUTATED"       
clus
  TNFRSF9 MUTATED TNFRSF9 WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-1806        TCGA-06-2557        TCGA-06-2558        TCGA-06-2559 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-2561        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2569        TCGA-06-2570 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5414        TCGA-06-5415        TCGA-06-5417 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-5418        TCGA-06-5856        TCGA-06-5858        TCGA-06-5859 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-6388        TCGA-06-6389        TCGA-06-6390        TCGA-06-6391 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-6693        TCGA-06-6694        TCGA-06-6695        TCGA-06-6697 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-06-6698        TCGA-06-6699        TCGA-06-6700        TCGA-06-6701 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-08-0386        TCGA-12-0616        TCGA-12-0618        TCGA-12-0619 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-0688        TCGA-12-0692        TCGA-12-0821        TCGA-12-1597 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-3649        TCGA-12-3650        TCGA-12-3652        TCGA-12-3653 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-12-5295        TCGA-12-5299        TCGA-12-5301        TCGA-14-0740 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0862 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1043        TCGA-14-1395        TCGA-14-1450 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5953 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1830        TCGA-27-1831 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-1832        TCGA-27-1833        TCGA-27-1834        TCGA-27-1835 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-1836        TCGA-27-1837        TCGA-27-1838        TCGA-27-2518 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-2519        TCGA-27-2521        TCGA-27-2523        TCGA-27-2524 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-27-2526        TCGA-27-2527        TCGA-27-2528        TCGA-28-1747 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-1753        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-2514        TCGA-28-5204        TCGA-28-5207 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5211        TCGA-28-5213 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-5214        TCGA-28-5215        TCGA-28-5216        TCGA-28-5218 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-28-5219        TCGA-28-5220        TCGA-28-6450        TCGA-32-1970 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-1977        TCGA-32-1979        TCGA-32-1980        TCGA-32-1982 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-1986        TCGA-32-1991        TCGA-32-2491        TCGA-32-2494 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-2495        TCGA-32-2615        TCGA-32-2632        TCGA-32-2634 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-2638        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"TNFRSF9 WILD-TYPE" "TNFRSF9 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFRSF9 MUTATED        1      2      1
  TNFRSF9 WILD-TYPE    291    430     61
D118V5, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               1               291
  CLUS_2               2               430
  CLUS_3               1                61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFRSF9 MUTATED        1      0      3      0
  TNFRSF9 WILD-TYPE    152    223     85    161
D118V6, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               1               152
  CLUS_2               0               223
  CLUS_3               3                85
  CLUS_4               0               161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFRSF9 MUTATED        1      1      1      1
  TNFRSF9 WILD-TYPE    184    154    137     94
D118V7, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               1               184
  CLUS_2               1               154
  CLUS_3               1               137
  CLUS_4               1                94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFRSF9 MUTATED        1      1      2
  TNFRSF9 WILD-TYPE    204    219    146
D118V8, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               1               204
  CLUS_2               1               219
  CLUS_3               2               146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFRSF9 MUTATED        1      1      1
  TNFRSF9 WILD-TYPE    237    190    227
D118V9, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               1               237
  CLUS_2               1               190
  CLUS_3               1               227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFRSF9 MUTATED        1      1      1
  TNFRSF9 WILD-TYPE    195    190    269
D118V10, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               1               195
  CLUS_2               1               190
  CLUS_3               1               269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFRSF9 MUTATED        2      0      0      1
  TNFRSF9 WILD-TYPE    138    107     83    181
D118V11, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               2               138
  CLUS_2               0               107
  CLUS_3               0                83
  CLUS_4               1               181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFRSF9 MUTATED        1      1      1
  TNFRSF9 WILD-TYPE    222    185    102
D118V12, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               1               222
  CLUS_2               1               185
  CLUS_3               1               102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFRSF9 MUTATED        2      0      0      1
  TNFRSF9 WILD-TYPE    125    119    106    155
D118V13, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               2               125
  CLUS_2               0               119
  CLUS_3               0               106
  CLUS_4               1               155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  TNFRSF9 MUTATED        1      0      1      0      1      0
  TNFRSF9 WILD-TYPE     98     77    119     57     62     92
D118V14, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               1                98
  CLUS_2               0                77
  CLUS_3               1               119
  CLUS_4               0                57
  CLUS_5               1                62
  CLUS_6               0                92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(119) Variable = PRG4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRG4 MUTATED        0      0      1      1
  PRG4 WILD-TYPE     78     41     63     56
D119V1, multiclass
[1] "Remove cluster labels:" "PRG4 MUTATED"          
clus
  PRG4 MUTATED PRG4 WILD-TYPE 
             2            238 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0781     TCGA-14-0786     TCGA-14-0787 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-0789     TCGA-14-0790     TCGA-14-0813     TCGA-14-0817 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1456     TCGA-14-1823     TCGA-14-1825 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-14-3476     TCGA-14-4157 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-15-0742     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5960     TCGA-26-1439 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-27-1830 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1836     TCGA-27-1837     TCGA-27-1838 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-2518     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2527     TCGA-27-2528 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2501     TCGA-28-2502 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-2509     TCGA-28-2510     TCGA-28-2513     TCGA-28-2514 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5204     TCGA-28-5207     TCGA-28-5208     TCGA-28-5209 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-4719 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-2573 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-41-2575     TCGA-41-3392     TCGA-41-3393     TCGA-41-3915 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-76-4925     TCGA-76-4926 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6282     TCGA-76-6285 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-81-5910     TCGA-87-5896 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRG4 MUTATED        0      1      0      1
  PRG4 WILD-TYPE     63     49     48     78
D119V2, multiclass
[1] "Remove cluster labels:" "PRG4 MUTATED"          
clus
  PRG4 MUTATED PRG4 WILD-TYPE 
             2            238 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0781     TCGA-14-0786     TCGA-14-0787 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-0789     TCGA-14-0790     TCGA-14-0813     TCGA-14-0817 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1456     TCGA-14-1823     TCGA-14-1825 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-14-3476     TCGA-14-4157 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-15-0742     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5960     TCGA-26-1439 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-27-1830 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1836     TCGA-27-1837     TCGA-27-1838 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-2518     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2527     TCGA-27-2528 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2501     TCGA-28-2502 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-2509     TCGA-28-2510     TCGA-28-2513     TCGA-28-2514 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5204     TCGA-28-5207     TCGA-28-5208     TCGA-28-5209 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-4719 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-2573 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-41-2575     TCGA-41-3392     TCGA-41-3393     TCGA-41-3915 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-76-4925     TCGA-76-4926 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6282     TCGA-76-6285 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-81-5910     TCGA-87-5896 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRG4 MUTATED        0      2      0      0
  PRG4 WILD-TYPE     70     96     44     63
D119V3, multiclass
[1] "Remove cluster labels:" "PRG4 MUTATED"          
clus
  PRG4 MUTATED PRG4 WILD-TYPE 
             2            273 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5960     TCGA-26-1439 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-26-6173 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-26-6174     TCGA-27-1830     TCGA-27-1831     TCGA-27-1832 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-1833     TCGA-27-1834     TCGA-27-1835     TCGA-27-1836 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-1837     TCGA-27-1838     TCGA-27-2518     TCGA-27-2519 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-2521     TCGA-27-2523     TCGA-27-2524     TCGA-27-2526 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-2527     TCGA-27-2528     TCGA-28-1747     TCGA-28-1753 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5211     TCGA-28-5213     TCGA-28-5214 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5219 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5220     TCGA-28-6450     TCGA-32-1970     TCGA-32-1977 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-1979     TCGA-32-1980     TCGA-32-1982     TCGA-32-1986 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-1991     TCGA-32-2491     TCGA-32-2494     TCGA-32-2495 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-2615     TCGA-32-2632     TCGA-32-2634     TCGA-32-2638 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-4208     TCGA-32-4209     TCGA-32-4210     TCGA-32-4211 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-4213     TCGA-32-4719     TCGA-32-5222     TCGA-41-2571 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-41-2572     TCGA-41-2573     TCGA-41-2575     TCGA-41-3392 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-41-3393     TCGA-41-3915     TCGA-41-4097     TCGA-41-5651 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-41-6646     TCGA-74-6573     TCGA-74-6575     TCGA-74-6577 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-74-6578     TCGA-74-6584     TCGA-76-4925     TCGA-76-4926 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6280     TCGA-76-6282 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-87-5896 
"PRG4 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRG4 MUTATED        1      0      1
  PRG4 WILD-TYPE    137     61     75
D119V4, multiclass
[1] "Remove cluster labels:" "PRG4 MUTATED"          
clus
  PRG4 MUTATED PRG4 WILD-TYPE 
             2            273 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5960     TCGA-26-1439 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-26-6173 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-26-6174     TCGA-27-1830     TCGA-27-1831     TCGA-27-1832 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-1833     TCGA-27-1834     TCGA-27-1835     TCGA-27-1836 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-1837     TCGA-27-1838     TCGA-27-2518     TCGA-27-2519 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-2521     TCGA-27-2523     TCGA-27-2524     TCGA-27-2526 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-27-2527     TCGA-27-2528     TCGA-28-1747     TCGA-28-1753 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5211     TCGA-28-5213     TCGA-28-5214 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5219 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-28-5220     TCGA-28-6450     TCGA-32-1970     TCGA-32-1977 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-1979     TCGA-32-1980     TCGA-32-1982     TCGA-32-1986 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-1991     TCGA-32-2491     TCGA-32-2494     TCGA-32-2495 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-2615     TCGA-32-2632     TCGA-32-2634     TCGA-32-2638 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-4208     TCGA-32-4209     TCGA-32-4210     TCGA-32-4211 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-32-4213     TCGA-32-4719     TCGA-32-5222     TCGA-41-2571 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-41-2572     TCGA-41-2573     TCGA-41-2575     TCGA-41-3392 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-41-3393     TCGA-41-3915     TCGA-41-4097     TCGA-41-5651 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-41-6646     TCGA-74-6573     TCGA-74-6575     TCGA-74-6577 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-74-6578     TCGA-74-6584     TCGA-76-4925     TCGA-76-4926 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6280     TCGA-76-6282 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" "PRG4 WILD-TYPE" 
    TCGA-87-5896 
"PRG4 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRG4 MUTATED        2      8      0
  PRG4 WILD-TYPE    290    424     62
D119V5, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            2            290
  CLUS_2            8            424
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRG4 MUTATED        2      4      1      3
  PRG4 WILD-TYPE    151    219     87    158
D119V6, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            2            151
  CLUS_2            4            219
  CLUS_3            1             87
  CLUS_4            3            158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRG4 MUTATED        3      3      0      2
  PRG4 WILD-TYPE    182    152    138     93
D119V7, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            3            182
  CLUS_2            3            152
  CLUS_3            0            138
  CLUS_4            2             93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRG4 MUTATED        1      4      3
  PRG4 WILD-TYPE    204    216    145
D119V8, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            1            204
  CLUS_2            4            216
  CLUS_3            3            145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRG4 MUTATED        2      4      3
  PRG4 WILD-TYPE    236    187    225
D119V9, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            2            236
  CLUS_2            4            187
  CLUS_3            3            225
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRG4 MUTATED        1      5      3
  PRG4 WILD-TYPE    195    186    267
D119V10, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            5            186
  CLUS_3            3            267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRG4 MUTATED        4      2      0      2
  PRG4 WILD-TYPE    136    105     83    180
D119V11, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            4            136
  CLUS_2            2            105
  CLUS_3            0             83
  CLUS_4            2            180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRG4 MUTATED        3      3      2
  PRG4 WILD-TYPE    220    183    101
D119V12, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            3            220
  CLUS_2            3            183
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRG4 MUTATED        2      2      1      3
  PRG4 WILD-TYPE    125    117    105    153
D119V13, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            2            125
  CLUS_2            2            117
  CLUS_3            1            105
  CLUS_4            3            153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  PRG4 MUTATED        2      1      2      1      2      0
  PRG4 WILD-TYPE     97     76    118     56     61     92
D119V14, multiclass
        clus
vv       PRG4 MUTATED PRG4 WILD-TYPE
  CLUS_1            2             97
  CLUS_2            1             76
  CLUS_3            2            118
  CLUS_4            1             56
  CLUS_5            2             61
  CLUS_6            0             92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(120) Variable = RFX4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RFX4 MUTATED        1      0      0      0
  RFX4 WILD-TYPE     77     41     64     57
D120V1, multiclass
[1] "Remove cluster labels:" "RFX4 MUTATED"          
clus
  RFX4 MUTATED RFX4 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0781     TCGA-14-0786     TCGA-14-0787 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-14-0789     TCGA-14-0790     TCGA-14-0813     TCGA-14-0817 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1456     TCGA-14-1823     TCGA-14-1825 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-14-3476     TCGA-14-4157 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-15-0742     TCGA-15-1444     TCGA-16-0846     TCGA-16-0861 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-16-1045     TCGA-16-1048     TCGA-19-1390     TCGA-19-1790 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-19-2619     TCGA-19-2620     TCGA-19-2624     TCGA-19-2625 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RFX4 MUTATED        0      0      0      1
  RFX4 WILD-TYPE     63     50     48     78
D120V2, multiclass
[1] "Remove cluster labels:" "RFX4 MUTATED"          
clus
  RFX4 MUTATED RFX4 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0781     TCGA-14-0786     TCGA-14-0787 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-14-0789     TCGA-14-0790     TCGA-14-0813     TCGA-14-0817 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1456     TCGA-14-1823     TCGA-14-1825 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-14-3476     TCGA-14-4157 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-15-0742     TCGA-15-1444     TCGA-16-0846     TCGA-16-0861 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-16-1045     TCGA-16-1048     TCGA-19-1390     TCGA-19-1790 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-19-2619     TCGA-19-2620     TCGA-19-2624     TCGA-19-2625 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RFX4 MUTATED        2      0      0      0
  RFX4 WILD-TYPE     68     98     44     63
D120V3, multiclass
[1] "Remove cluster labels:" "RFX4 MUTATED"          
clus
  RFX4 MUTATED RFX4 WILD-TYPE 
             2            273 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-19-2624     TCGA-19-2625     TCGA-19-2629     TCGA-19-2631 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-19-4068     TCGA-19-5947     TCGA-19-5950     TCGA-19-5951 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-19-5952     TCGA-19-5953     TCGA-19-5954     TCGA-19-5955 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-19-5958     TCGA-19-5959     TCGA-19-5960     TCGA-26-1439 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-26-6173 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-26-6174     TCGA-27-1830     TCGA-27-1831     TCGA-27-1832 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-27-1833     TCGA-27-1834     TCGA-27-1835     TCGA-27-1836 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-27-1837     TCGA-27-1838     TCGA-27-2518     TCGA-27-2519 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-27-2521     TCGA-27-2523     TCGA-27-2524     TCGA-27-2526 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-27-2527     TCGA-27-2528     TCGA-28-1747     TCGA-28-1753 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5211     TCGA-28-5213     TCGA-28-5214 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5219 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-28-5220     TCGA-28-6450     TCGA-32-1970     TCGA-32-1977 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-32-1979     TCGA-32-1980     TCGA-32-1982     TCGA-32-1986 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-32-1991     TCGA-32-2491     TCGA-32-2494     TCGA-32-2495 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-32-2615     TCGA-32-2632     TCGA-32-2634     TCGA-32-2638 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-32-4208     TCGA-32-4209     TCGA-32-4210     TCGA-32-4211 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-32-4213     TCGA-32-4719     TCGA-32-5222     TCGA-41-2571 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-41-2572     TCGA-41-2573     TCGA-41-2575     TCGA-41-3392 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-41-3393     TCGA-41-3915     TCGA-41-4097     TCGA-41-5651 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-41-6646     TCGA-74-6573     TCGA-74-6575     TCGA-74-6577 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-74-6578     TCGA-74-6584     TCGA-76-4925     TCGA-76-4926 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6280     TCGA-76-6282 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-87-5896 
"RFX4 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RFX4 MUTATED        1      0      1
  RFX4 WILD-TYPE    137     61     75
D120V4, multiclass
[1] "Remove cluster labels:" "RFX4 MUTATED"          
clus
  RFX4 MUTATED RFX4 WILD-TYPE 
             2            273 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-19-2624     TCGA-19-2625     TCGA-19-2629     TCGA-19-2631 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-19-4068     TCGA-19-5947     TCGA-19-5950     TCGA-19-5951 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-19-5952     TCGA-19-5953     TCGA-19-5954     TCGA-19-5955 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-19-5958     TCGA-19-5959     TCGA-19-5960     TCGA-26-1439 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-26-6173 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-26-6174     TCGA-27-1830     TCGA-27-1831     TCGA-27-1832 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-27-1833     TCGA-27-1834     TCGA-27-1835     TCGA-27-1836 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-27-1837     TCGA-27-1838     TCGA-27-2518     TCGA-27-2519 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-27-2521     TCGA-27-2523     TCGA-27-2524     TCGA-27-2526 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-27-2527     TCGA-27-2528     TCGA-28-1747     TCGA-28-1753 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5211     TCGA-28-5213     TCGA-28-5214 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5219 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-28-5220     TCGA-28-6450     TCGA-32-1970     TCGA-32-1977 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-32-1979     TCGA-32-1980     TCGA-32-1982     TCGA-32-1986 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-32-1991     TCGA-32-2491     TCGA-32-2494     TCGA-32-2495 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-32-2615     TCGA-32-2632     TCGA-32-2634     TCGA-32-2638 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-32-4208     TCGA-32-4209     TCGA-32-4210     TCGA-32-4211 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-32-4213     TCGA-32-4719     TCGA-32-5222     TCGA-41-2571 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-41-2572     TCGA-41-2573     TCGA-41-2575     TCGA-41-3392 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-41-3393     TCGA-41-3915     TCGA-41-4097     TCGA-41-5651 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-41-6646     TCGA-74-6573     TCGA-74-6575     TCGA-74-6577 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-74-6578     TCGA-74-6584     TCGA-76-4925     TCGA-76-4926 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6280     TCGA-76-6282 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" "RFX4 WILD-TYPE" 
    TCGA-87-5896 
"RFX4 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RFX4 MUTATED        2      3      1
  RFX4 WILD-TYPE    290    429     61
D120V5, multiclass
        clus
vv       RFX4 MUTATED RFX4 WILD-TYPE
  CLUS_1            2            290
  CLUS_2            3            429
  CLUS_3            1             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RFX4 MUTATED        2      0      1      2
  RFX4 WILD-TYPE    151    223     87    159
D120V6, multiclass
        clus
vv       RFX4 MUTATED RFX4 WILD-TYPE
  CLUS_1            2            151
  CLUS_2            0            223
  CLUS_3            1             87
  CLUS_4            2            159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RFX4 MUTATED        3      1      0      0
  RFX4 WILD-TYPE    182    154    138     95
D120V7, multiclass
        clus
vv       RFX4 MUTATED RFX4 WILD-TYPE
  CLUS_1            3            182
  CLUS_2            1            154
  CLUS_3            0            138
  CLUS_4            0             95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RFX4 MUTATED        2      1      1
  RFX4 WILD-TYPE    203    219    147
D120V8, multiclass
        clus
vv       RFX4 MUTATED RFX4 WILD-TYPE
  CLUS_1            2            203
  CLUS_2            1            219
  CLUS_3            1            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RFX4 MUTATED        1      1      2
  RFX4 WILD-TYPE    237    190    226
D120V9, multiclass
        clus
vv       RFX4 MUTATED RFX4 WILD-TYPE
  CLUS_1            1            237
  CLUS_2            1            190
  CLUS_3            2            226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RFX4 MUTATED        0      1      3
  RFX4 WILD-TYPE    196    190    267
D120V10, multiclass
        clus
vv       RFX4 MUTATED RFX4 WILD-TYPE
  CLUS_1            0            196
  CLUS_2            1            190
  CLUS_3            3            267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RFX4 MUTATED        0      1      1      2
  RFX4 WILD-TYPE    140    106     82    180
D120V11, multiclass
        clus
vv       RFX4 MUTATED RFX4 WILD-TYPE
  CLUS_1            0            140
  CLUS_2            1            106
  CLUS_3            1             82
  CLUS_4            2            180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RFX4 MUTATED        1      2      1
  RFX4 WILD-TYPE    222    184    102
D120V12, multiclass
        clus
vv       RFX4 MUTATED RFX4 WILD-TYPE
  CLUS_1            1            222
  CLUS_2            2            184
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RFX4 MUTATED        0      0      2      2
  RFX4 WILD-TYPE    127    119    104    154
D120V13, multiclass
        clus
vv       RFX4 MUTATED RFX4 WILD-TYPE
  CLUS_1            0            127
  CLUS_2            0            119
  CLUS_3            2            104
  CLUS_4            2            154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  RFX4 MUTATED        0      1      1      1      0      1
  RFX4 WILD-TYPE     99     76    119     56     63     91
D120V14, multiclass
        clus
vv       RFX4 MUTATED RFX4 WILD-TYPE
  CLUS_1            0             99
  CLUS_2            1             76
  CLUS_3            1            119
  CLUS_4            1             56
  CLUS_5            0             63
  CLUS_6            1             91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(121) Variable = LUM MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LUM MUTATED        1      0      2      0
  LUM WILD-TYPE     77     41     62     57
D121V1, multiclass
        clus
vv       LUM MUTATED LUM WILD-TYPE
  CLUS_1           1            77
  CLUS_2           0            41
  CLUS_3           2            62
  CLUS_4           0            57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LUM MUTATED        1      0      2      0
  LUM WILD-TYPE     62     50     46     79
D121V2, multiclass
        clus
vv       LUM MUTATED LUM WILD-TYPE
  CLUS_1           1            62
  CLUS_2           0            50
  CLUS_3           2            46
  CLUS_4           0            79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LUM MUTATED        0      1      1      3
  LUM WILD-TYPE     70     97     43     60
D121V3, multiclass
        clus
vv       LUM MUTATED LUM WILD-TYPE
  CLUS_1           0            70
  CLUS_2           1            97
  CLUS_3           1            43
  CLUS_4           3            60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  LUM MUTATED        2      2      1
  LUM WILD-TYPE    136     59     75
D121V4, multiclass
        clus
vv       LUM MUTATED LUM WILD-TYPE
  CLUS_1           2           136
  CLUS_2           2            59
  CLUS_3           1            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  LUM MUTATED        6      1      0
  LUM WILD-TYPE    286    431     62
D121V5, multiclass
        clus
vv       LUM MUTATED LUM WILD-TYPE
  CLUS_1           6           286
  CLUS_2           1           431
  CLUS_3           0            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LUM MUTATED        2      1      1      0
  LUM WILD-TYPE    151    222     87    161
D121V6, multiclass
        clus
vv       LUM MUTATED LUM WILD-TYPE
  CLUS_1           2           151
  CLUS_2           1           222
  CLUS_3           1            87
  CLUS_4           0           161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LUM MUTATED        1      1      1      1
  LUM WILD-TYPE    184    154    137     94
D121V7, multiclass
        clus
vv       LUM MUTATED LUM WILD-TYPE
  CLUS_1           1           184
  CLUS_2           1           154
  CLUS_3           1           137
  CLUS_4           1            94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  LUM MUTATED        1      2      1
  LUM WILD-TYPE    204    218    147
D121V8, multiclass
        clus
vv       LUM MUTATED LUM WILD-TYPE
  CLUS_1           1           204
  CLUS_2           2           218
  CLUS_3           1           147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  LUM MUTATED        2      1      0
  LUM WILD-TYPE    236    190    228
D121V9, multiclass
        clus
vv       LUM MUTATED LUM WILD-TYPE
  CLUS_1           2           236
  CLUS_2           1           190
  CLUS_3           0           228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  LUM MUTATED        1      1      1
  LUM WILD-TYPE    195    190    269
D121V10, multiclass
        clus
vv       LUM MUTATED LUM WILD-TYPE
  CLUS_1           1           195
  CLUS_2           1           190
  CLUS_3           1           269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LUM MUTATED        0      1      0      1
  LUM WILD-TYPE    140    106     83    181
D121V11, multiclass
[1] "Remove cluster labels:" "LUM MUTATED"           
clus
  LUM MUTATED LUM WILD-TYPE 
            2           510 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5280    TCGA-DB-5281 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-A4X9    TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-A4XE    TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-A64O    TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-A64U    TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-A75L    TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DH-5142    TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DH-A66D    TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DH-A7UT    TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-5851    TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-5870    TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6393 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397    TCGA-DU-6399 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403    TCGA-DU-6404 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408    TCGA-DU-6410 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008    TCGA-DU-7009 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-7010    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7014    TCGA-DU-7015 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-7018    TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7292    TCGA-DU-7294 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-7298    TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-7304    TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-8162    TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8167 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS    TCGA-DU-A5TT 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2    TCGA-DU-A6S3 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-A6S6    TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K    TCGA-DU-A76L 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8    TCGA-DU-A7TA 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-A7TB    TCGA-DU-A7TC    TCGA-DU-A7TD    TCGA-DU-A7TG    TCGA-DU-A7TI 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-A7TJ    TCGA-E1-5302    TCGA-E1-5303    TCGA-E1-5304    TCGA-E1-5305 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-E1-5307    TCGA-E1-5311    TCGA-E1-5318    TCGA-E1-5319    TCGA-E1-5322 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-E1-A7YD    TCGA-E1-A7YE    TCGA-E1-A7YH    TCGA-E1-A7YI    TCGA-E1-A7YJ 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-E1-A7YK    TCGA-E1-A7YL    TCGA-E1-A7YM    TCGA-E1-A7YN    TCGA-E1-A7YO 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-E1-A7YQ    TCGA-E1-A7YS    TCGA-E1-A7YU    TCGA-E1-A7YV    TCGA-E1-A7YW 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-E1-A7YY    TCGA-E1-A7Z2    TCGA-E1-A7Z3    TCGA-E1-A7Z4    TCGA-E1-A7Z6 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-EZ-7264    TCGA-F6-A8O3    TCGA-F6-A8O4    TCGA-FG-5962    TCGA-FG-5963 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-5964    TCGA-FG-5965    TCGA-FG-6688    TCGA-FG-6689    TCGA-FG-6690 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-6691    TCGA-FG-6692    TCGA-FG-7634    TCGA-FG-7636    TCGA-FG-7637 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-7638    TCGA-FG-7641    TCGA-FG-7643    TCGA-FG-8181    TCGA-FG-8182 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-8185    TCGA-FG-8186    TCGA-FG-8187    TCGA-FG-8188    TCGA-FG-8189 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-8191    TCGA-FG-A4MT    TCGA-FG-A4MU    TCGA-FG-A4MW    TCGA-FG-A4MX 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-A4MY    TCGA-FG-A60J    TCGA-FG-A60K    TCGA-FG-A60L    TCGA-FG-A6IZ 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-A6J1    TCGA-FG-A6J3    TCGA-FG-A70Y    TCGA-FG-A70Z    TCGA-FG-A710 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-A711    TCGA-FG-A713    TCGA-FG-A87N    TCGA-FG-A87Q    TCGA-FN-7833 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7467    TCGA-HT-7468    TCGA-HT-7469    TCGA-HT-7470    TCGA-HT-7471 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7472    TCGA-HT-7473    TCGA-HT-7474    TCGA-HT-7475    TCGA-HT-7476 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7477    TCGA-HT-7478    TCGA-HT-7479    TCGA-HT-7480    TCGA-HT-7481 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7482    TCGA-HT-7483    TCGA-HT-7485    TCGA-HT-7601    TCGA-HT-7602 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7603    TCGA-HT-7604    TCGA-HT-7605    TCGA-HT-7606    TCGA-HT-7607 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7608    TCGA-HT-7609    TCGA-HT-7610    TCGA-HT-7611    TCGA-HT-7616 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7620    TCGA-HT-7676    TCGA-HT-7677    TCGA-HT-7680    TCGA-HT-7681 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7684    TCGA-HT-7686    TCGA-HT-7687    TCGA-HT-7688    TCGA-HT-7689 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7690    TCGA-HT-7691    TCGA-HT-7692    TCGA-HT-7693    TCGA-HT-7694 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7695    TCGA-HT-7854    TCGA-HT-7855    TCGA-HT-7856    TCGA-HT-7857 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7858    TCGA-HT-7860    TCGA-HT-7873    TCGA-HT-7874    TCGA-HT-7875 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7877    TCGA-HT-7879    TCGA-HT-7880    TCGA-HT-7881    TCGA-HT-7882 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7884    TCGA-HT-7902    TCGA-HT-8010    TCGA-HT-8011    TCGA-HT-8012 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-8013    TCGA-HT-8015    TCGA-HT-8018    TCGA-HT-8019    TCGA-HT-8104 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-8105    TCGA-HT-8106    TCGA-HT-8107    TCGA-HT-8108    TCGA-HT-8109 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-8110    TCGA-HT-8111    TCGA-HT-8113    TCGA-HT-8114    TCGA-HT-8558 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-8563    TCGA-HT-8564    TCGA-HT-A4DS    TCGA-HT-A4DV    TCGA-HT-A5R5 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-A5R7    TCGA-HT-A5R9    TCGA-HT-A5RA    TCGA-HT-A5RB    TCGA-HT-A5RC 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-A614    TCGA-HT-A615    TCGA-HT-A616    TCGA-HT-A617    TCGA-HT-A618 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-A619    TCGA-HT-A61A    TCGA-HT-A61B    TCGA-HT-A61C    TCGA-HT-A74H 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-A74K    TCGA-HT-A74L    TCGA-HT-A74O    TCGA-HW-7486    TCGA-HW-7487 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HW-7489    TCGA-HW-7490    TCGA-HW-7491    TCGA-HW-7493    TCGA-HW-7495 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HW-8319    TCGA-HW-8320    TCGA-HW-8321    TCGA-HW-8322    TCGA-HW-A5KJ 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HW-A5KK    TCGA-HW-A5KL    TCGA-HW-A5KM    TCGA-IK-7675    TCGA-IK-8125 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-KT-A74X    TCGA-KT-A7W1    TCGA-P5-A5ET    TCGA-P5-A5EU    TCGA-P5-A5EV 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-P5-A5EW    TCGA-P5-A5EX    TCGA-P5-A5EY    TCGA-P5-A5EZ    TCGA-P5-A5F0 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-P5-A5F1    TCGA-P5-A5F2    TCGA-P5-A5F4    TCGA-P5-A5F6    TCGA-P5-A72U 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-P5-A72W    TCGA-P5-A72X    TCGA-P5-A72Z    TCGA-P5-A730    TCGA-P5-A731 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-P5-A733    TCGA-P5-A735    TCGA-P5-A736    TCGA-P5-A737    TCGA-P5-A77W 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-P5-A77X    TCGA-P5-A780    TCGA-P5-A781    TCGA-QH-A65R    TCGA-QH-A65S 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-QH-A65V    TCGA-QH-A65X    TCGA-QH-A65Z    TCGA-QH-A6CS    TCGA-QH-A6CU 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-QH-A6CV    TCGA-QH-A6CX    TCGA-QH-A6CY    TCGA-QH-A6CZ    TCGA-QH-A6X3 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-QH-A6X4    TCGA-QH-A6X5    TCGA-QH-A6X8    TCGA-QH-A6X9    TCGA-QH-A6XA 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-QH-A6XC    TCGA-QH-A86X    TCGA-QH-A870    TCGA-R8-A6MK    TCGA-R8-A6ML 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-R8-A6MO    TCGA-R8-A6YH    TCGA-R8-A73M    TCGA-RY-A83X    TCGA-RY-A83Y 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-RY-A83Z    TCGA-RY-A840    TCGA-RY-A843    TCGA-RY-A845    TCGA-RY-A847 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A6TS    TCGA-S9-A6TU    TCGA-S9-A6TV    TCGA-S9-A6TW    TCGA-S9-A6TX 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A6TY    TCGA-S9-A6TZ    TCGA-S9-A6U0    TCGA-S9-A6U1    TCGA-S9-A6U2 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A6U5    TCGA-S9-A6U6    TCGA-S9-A6U8    TCGA-S9-A6U9    TCGA-S9-A6UA 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A6UB    TCGA-S9-A6WD    TCGA-S9-A6WE    TCGA-S9-A6WG    TCGA-S9-A6WH 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A6WI    TCGA-S9-A6WL    TCGA-S9-A6WM    TCGA-S9-A6WN    TCGA-S9-A6WO 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A6WP    TCGA-S9-A6WQ    TCGA-S9-A7IQ    TCGA-S9-A7IS    TCGA-S9-A7IX 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A7IY    TCGA-S9-A7IZ    TCGA-S9-A7J0    TCGA-S9-A7J1    TCGA-S9-A7J2 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A7J3    TCGA-S9-A7QW    TCGA-S9-A7QX    TCGA-S9-A7QY    TCGA-S9-A7QZ 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A7R1    TCGA-S9-A7R2    TCGA-S9-A7R3    TCGA-S9-A7R4    TCGA-S9-A7R7 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A7R8    TCGA-S9-A89V    TCGA-S9-A89Z    TCGA-TM-A7C3    TCGA-TM-A7C4 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TM-A7C5    TCGA-TM-A7CA    TCGA-TM-A7CF    TCGA-TM-A84B    TCGA-TM-A84C 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TM-A84F    TCGA-TM-A84G    TCGA-TM-A84H    TCGA-TM-A84I    TCGA-TM-A84J 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TM-A84L    TCGA-TM-A84M    TCGA-TM-A84O    TCGA-TM-A84Q    TCGA-TM-A84R 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TM-A84S    TCGA-TM-A84T    TCGA-TQ-A7RF    TCGA-TQ-A7RG    TCGA-TQ-A7RH 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TQ-A7RI    TCGA-TQ-A7RJ    TCGA-TQ-A7RK    TCGA-TQ-A7RM    TCGA-TQ-A7RN 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TQ-A7RO    TCGA-TQ-A7RP    TCGA-TQ-A7RQ    TCGA-TQ-A7RR    TCGA-TQ-A7RS 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TQ-A7RU    TCGA-TQ-A7RV    TCGA-TQ-A7RW    TCGA-TQ-A8XE    TCGA-VM-A8C8 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-VM-A8C9    TCGA-VM-A8CA    TCGA-VM-A8CB    TCGA-VM-A8CD    TCGA-VM-A8CE 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-VM-A8CF    TCGA-VM-A8CH    TCGA-VV-A829    TCGA-VV-A86M    TCGA-VW-A7QS 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-VW-A8FI    TCGA-W9-A837    TCGA-WH-A86K    TCGA-WY-A858    TCGA-WY-A859 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-WY-A85A    TCGA-WY-A85B    TCGA-WY-A85C    TCGA-WY-A85D    TCGA-WY-A85E 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  LUM MUTATED        0      1      1
  LUM WILD-TYPE    223    185    102
D121V12, multiclass
[1] "Remove cluster labels:" "LUM MUTATED"           
clus
  LUM MUTATED LUM WILD-TYPE 
            2           510 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5280    TCGA-DB-5281 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-A4X9    TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-A4XE    TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-A64O    TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-A64U    TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-A75L    TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DH-5142    TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DH-A66D    TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DH-A7UT    TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-5851    TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-5870    TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6393 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397    TCGA-DU-6399 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403    TCGA-DU-6404 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408    TCGA-DU-6410 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008    TCGA-DU-7009 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-7010    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7014    TCGA-DU-7015 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-7018    TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7292    TCGA-DU-7294 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-7298    TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-7304    TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-8162    TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8167 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS    TCGA-DU-A5TT 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2    TCGA-DU-A6S3 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-A6S6    TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K    TCGA-DU-A76L 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8    TCGA-DU-A7TA 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-A7TB    TCGA-DU-A7TC    TCGA-DU-A7TD    TCGA-DU-A7TG    TCGA-DU-A7TI 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-A7TJ    TCGA-E1-5302    TCGA-E1-5303    TCGA-E1-5304    TCGA-E1-5305 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-E1-5307    TCGA-E1-5311    TCGA-E1-5318    TCGA-E1-5319    TCGA-E1-5322 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-E1-A7YD    TCGA-E1-A7YE    TCGA-E1-A7YH    TCGA-E1-A7YI    TCGA-E1-A7YJ 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-E1-A7YK    TCGA-E1-A7YL    TCGA-E1-A7YM    TCGA-E1-A7YN    TCGA-E1-A7YO 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-E1-A7YQ    TCGA-E1-A7YS    TCGA-E1-A7YU    TCGA-E1-A7YV    TCGA-E1-A7YW 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-E1-A7YY    TCGA-E1-A7Z2    TCGA-E1-A7Z3    TCGA-E1-A7Z4    TCGA-E1-A7Z6 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-EZ-7264    TCGA-F6-A8O3    TCGA-F6-A8O4    TCGA-FG-5962    TCGA-FG-5963 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-5964    TCGA-FG-5965    TCGA-FG-6688    TCGA-FG-6689    TCGA-FG-6690 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-6691    TCGA-FG-6692    TCGA-FG-7634    TCGA-FG-7636    TCGA-FG-7637 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-7638    TCGA-FG-7641    TCGA-FG-7643    TCGA-FG-8181    TCGA-FG-8182 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-8185    TCGA-FG-8186    TCGA-FG-8187    TCGA-FG-8188    TCGA-FG-8189 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-8191    TCGA-FG-A4MT    TCGA-FG-A4MU    TCGA-FG-A4MW    TCGA-FG-A4MX 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-A4MY    TCGA-FG-A60J    TCGA-FG-A60K    TCGA-FG-A60L    TCGA-FG-A6IZ 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-A6J1    TCGA-FG-A6J3    TCGA-FG-A70Y    TCGA-FG-A70Z    TCGA-FG-A710 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-A711    TCGA-FG-A713    TCGA-FG-A87N    TCGA-FG-A87Q    TCGA-FN-7833 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7467    TCGA-HT-7468    TCGA-HT-7469    TCGA-HT-7470    TCGA-HT-7471 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7472    TCGA-HT-7473    TCGA-HT-7474    TCGA-HT-7475    TCGA-HT-7476 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7477    TCGA-HT-7478    TCGA-HT-7479    TCGA-HT-7480    TCGA-HT-7481 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7482    TCGA-HT-7483    TCGA-HT-7485    TCGA-HT-7601    TCGA-HT-7602 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7603    TCGA-HT-7604    TCGA-HT-7605    TCGA-HT-7606    TCGA-HT-7607 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7608    TCGA-HT-7609    TCGA-HT-7610    TCGA-HT-7611    TCGA-HT-7616 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7620    TCGA-HT-7676    TCGA-HT-7677    TCGA-HT-7680    TCGA-HT-7681 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7684    TCGA-HT-7686    TCGA-HT-7687    TCGA-HT-7688    TCGA-HT-7689 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7690    TCGA-HT-7691    TCGA-HT-7692    TCGA-HT-7693    TCGA-HT-7694 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7695    TCGA-HT-7854    TCGA-HT-7855    TCGA-HT-7856    TCGA-HT-7857 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7858    TCGA-HT-7860    TCGA-HT-7873    TCGA-HT-7874    TCGA-HT-7875 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7877    TCGA-HT-7879    TCGA-HT-7880    TCGA-HT-7881    TCGA-HT-7882 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7884    TCGA-HT-7902    TCGA-HT-8010    TCGA-HT-8011    TCGA-HT-8012 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-8013    TCGA-HT-8015    TCGA-HT-8018    TCGA-HT-8019    TCGA-HT-8104 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-8105    TCGA-HT-8106    TCGA-HT-8107    TCGA-HT-8108    TCGA-HT-8109 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-8110    TCGA-HT-8111    TCGA-HT-8113    TCGA-HT-8114    TCGA-HT-8558 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-8563    TCGA-HT-8564    TCGA-HT-A4DS    TCGA-HT-A4DV    TCGA-HT-A5R5 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-A5R7    TCGA-HT-A5R9    TCGA-HT-A5RA    TCGA-HT-A5RB    TCGA-HT-A5RC 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-A614    TCGA-HT-A615    TCGA-HT-A616    TCGA-HT-A617    TCGA-HT-A618 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-A619    TCGA-HT-A61A    TCGA-HT-A61B    TCGA-HT-A61C    TCGA-HT-A74H 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-A74K    TCGA-HT-A74L    TCGA-HT-A74O    TCGA-HW-7486    TCGA-HW-7487 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HW-7489    TCGA-HW-7490    TCGA-HW-7491    TCGA-HW-7493    TCGA-HW-7495 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HW-8319    TCGA-HW-8320    TCGA-HW-8321    TCGA-HW-8322    TCGA-HW-A5KJ 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HW-A5KK    TCGA-HW-A5KL    TCGA-HW-A5KM    TCGA-IK-7675    TCGA-IK-8125 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-KT-A74X    TCGA-KT-A7W1    TCGA-P5-A5ET    TCGA-P5-A5EU    TCGA-P5-A5EV 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-P5-A5EW    TCGA-P5-A5EX    TCGA-P5-A5EY    TCGA-P5-A5EZ    TCGA-P5-A5F0 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-P5-A5F1    TCGA-P5-A5F2    TCGA-P5-A5F4    TCGA-P5-A5F6    TCGA-P5-A72U 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-P5-A72W    TCGA-P5-A72X    TCGA-P5-A72Z    TCGA-P5-A730    TCGA-P5-A731 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-P5-A733    TCGA-P5-A735    TCGA-P5-A736    TCGA-P5-A737    TCGA-P5-A77W 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-P5-A77X    TCGA-P5-A780    TCGA-P5-A781    TCGA-QH-A65R    TCGA-QH-A65S 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-QH-A65V    TCGA-QH-A65X    TCGA-QH-A65Z    TCGA-QH-A6CS    TCGA-QH-A6CU 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-QH-A6CV    TCGA-QH-A6CX    TCGA-QH-A6CY    TCGA-QH-A6CZ    TCGA-QH-A6X3 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-QH-A6X4    TCGA-QH-A6X5    TCGA-QH-A6X8    TCGA-QH-A6X9    TCGA-QH-A6XA 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-QH-A6XC    TCGA-QH-A86X    TCGA-QH-A870    TCGA-R8-A6MK    TCGA-R8-A6ML 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-R8-A6MO    TCGA-R8-A6YH    TCGA-R8-A73M    TCGA-RY-A83X    TCGA-RY-A83Y 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-RY-A83Z    TCGA-RY-A840    TCGA-RY-A843    TCGA-RY-A845    TCGA-RY-A847 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A6TS    TCGA-S9-A6TU    TCGA-S9-A6TV    TCGA-S9-A6TW    TCGA-S9-A6TX 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A6TY    TCGA-S9-A6TZ    TCGA-S9-A6U0    TCGA-S9-A6U1    TCGA-S9-A6U2 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A6U5    TCGA-S9-A6U6    TCGA-S9-A6U8    TCGA-S9-A6U9    TCGA-S9-A6UA 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A6UB    TCGA-S9-A6WD    TCGA-S9-A6WE    TCGA-S9-A6WG    TCGA-S9-A6WH 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A6WI    TCGA-S9-A6WL    TCGA-S9-A6WM    TCGA-S9-A6WN    TCGA-S9-A6WO 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A6WP    TCGA-S9-A6WQ    TCGA-S9-A7IQ    TCGA-S9-A7IS    TCGA-S9-A7IX 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A7IY    TCGA-S9-A7IZ    TCGA-S9-A7J0    TCGA-S9-A7J1    TCGA-S9-A7J2 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A7J3    TCGA-S9-A7QW    TCGA-S9-A7QX    TCGA-S9-A7QY    TCGA-S9-A7QZ 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A7R1    TCGA-S9-A7R2    TCGA-S9-A7R3    TCGA-S9-A7R4    TCGA-S9-A7R7 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A7R8    TCGA-S9-A89V    TCGA-S9-A89Z    TCGA-TM-A7C3    TCGA-TM-A7C4 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TM-A7C5    TCGA-TM-A7CA    TCGA-TM-A7CF    TCGA-TM-A84B    TCGA-TM-A84C 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TM-A84F    TCGA-TM-A84G    TCGA-TM-A84H    TCGA-TM-A84I    TCGA-TM-A84J 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TM-A84L    TCGA-TM-A84M    TCGA-TM-A84O    TCGA-TM-A84Q    TCGA-TM-A84R 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TM-A84S    TCGA-TM-A84T    TCGA-TQ-A7RF    TCGA-TQ-A7RG    TCGA-TQ-A7RH 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TQ-A7RI    TCGA-TQ-A7RJ    TCGA-TQ-A7RK    TCGA-TQ-A7RM    TCGA-TQ-A7RN 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TQ-A7RO    TCGA-TQ-A7RP    TCGA-TQ-A7RQ    TCGA-TQ-A7RR    TCGA-TQ-A7RS 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TQ-A7RU    TCGA-TQ-A7RV    TCGA-TQ-A7RW    TCGA-TQ-A8XE    TCGA-VM-A8C8 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-VM-A8C9    TCGA-VM-A8CA    TCGA-VM-A8CB    TCGA-VM-A8CD    TCGA-VM-A8CE 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-VM-A8CF    TCGA-VM-A8CH    TCGA-VV-A829    TCGA-VV-A86M    TCGA-VW-A7QS 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-VW-A8FI    TCGA-W9-A837    TCGA-WH-A86K    TCGA-WY-A858    TCGA-WY-A859 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-WY-A85A    TCGA-WY-A85B    TCGA-WY-A85C    TCGA-WY-A85D    TCGA-WY-A85E 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LUM MUTATED        0      0      0      2
  LUM WILD-TYPE    127    119    106    154
D121V13, multiclass
[1] "Remove cluster labels:" "LUM MUTATED"           
clus
  LUM MUTATED LUM WILD-TYPE 
            2           506 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5281    TCGA-DB-A4X9 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD    TCGA-DB-A4XE 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L    TCGA-DB-A64O 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S    TCGA-DB-A64U 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K    TCGA-DB-A75L 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141    TCGA-DH-5142 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B    TCGA-DH-A66D 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US    TCGA-DH-A7UT 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849    TCGA-DU-5851 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855    TCGA-DU-5870 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6393    TCGA-DU-6394 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397    TCGA-DU-6399    TCGA-DU-6400 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403    TCGA-DU-6404    TCGA-DU-6405 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408    TCGA-DU-6410    TCGA-DU-6542 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008    TCGA-DU-7009    TCGA-DU-7010 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7014    TCGA-DU-7015    TCGA-DU-7018 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7292    TCGA-DU-7294    TCGA-DU-7298 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302    TCGA-DU-7304 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161    TCGA-DU-8162 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8167    TCGA-DU-8168 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS    TCGA-DU-A5TT    TCGA-DU-A5TU 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2    TCGA-DU-A6S3    TCGA-DU-A6S6 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K    TCGA-DU-A76L    TCGA-DU-A76O 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8    TCGA-DU-A7TA    TCGA-DU-A7TB 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-A7TC    TCGA-DU-A7TD    TCGA-DU-A7TG    TCGA-DU-A7TI    TCGA-DU-A7TJ 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-E1-5302    TCGA-E1-5303    TCGA-E1-5304    TCGA-E1-5305    TCGA-E1-5307 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-E1-5311    TCGA-E1-5318    TCGA-E1-5319    TCGA-E1-5322    TCGA-E1-A7YD 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-E1-A7YE    TCGA-E1-A7YH    TCGA-E1-A7YI    TCGA-E1-A7YJ    TCGA-E1-A7YK 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-E1-A7YL    TCGA-E1-A7YM    TCGA-E1-A7YN    TCGA-E1-A7YO    TCGA-E1-A7YQ 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-E1-A7YS    TCGA-E1-A7YU    TCGA-E1-A7YV    TCGA-E1-A7YW    TCGA-E1-A7YY 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-E1-A7Z2    TCGA-E1-A7Z3    TCGA-E1-A7Z4    TCGA-E1-A7Z6    TCGA-EZ-7264 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-F6-A8O3    TCGA-F6-A8O4    TCGA-FG-5962    TCGA-FG-5963    TCGA-FG-5964 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-5965    TCGA-FG-6688    TCGA-FG-6689    TCGA-FG-6690    TCGA-FG-6691 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-6692    TCGA-FG-7634    TCGA-FG-7636    TCGA-FG-7637    TCGA-FG-7638 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-7641    TCGA-FG-7643    TCGA-FG-8181    TCGA-FG-8182    TCGA-FG-8185 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-8186    TCGA-FG-8187    TCGA-FG-8188    TCGA-FG-8189    TCGA-FG-8191 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-A4MT    TCGA-FG-A4MU    TCGA-FG-A4MW    TCGA-FG-A4MX    TCGA-FG-A4MY 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-A60J    TCGA-FG-A60K    TCGA-FG-A60L    TCGA-FG-A6IZ    TCGA-FG-A6J1 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-A6J3    TCGA-FG-A70Y    TCGA-FG-A70Z    TCGA-FG-A710    TCGA-FG-A711 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-A713    TCGA-FG-A87N    TCGA-FG-A87Q    TCGA-FN-7833    TCGA-HT-7467 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7468    TCGA-HT-7469    TCGA-HT-7470    TCGA-HT-7471    TCGA-HT-7472 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7473    TCGA-HT-7474    TCGA-HT-7475    TCGA-HT-7476    TCGA-HT-7477 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7478    TCGA-HT-7479    TCGA-HT-7480    TCGA-HT-7481    TCGA-HT-7482 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7483    TCGA-HT-7485    TCGA-HT-7601    TCGA-HT-7602    TCGA-HT-7603 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7604    TCGA-HT-7605    TCGA-HT-7606    TCGA-HT-7607    TCGA-HT-7608 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7609    TCGA-HT-7610    TCGA-HT-7611    TCGA-HT-7616    TCGA-HT-7620 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7676    TCGA-HT-7677    TCGA-HT-7680    TCGA-HT-7681    TCGA-HT-7684 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7686    TCGA-HT-7687    TCGA-HT-7688    TCGA-HT-7689    TCGA-HT-7690 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7691    TCGA-HT-7692    TCGA-HT-7693    TCGA-HT-7694    TCGA-HT-7695 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7854    TCGA-HT-7855    TCGA-HT-7856    TCGA-HT-7857    TCGA-HT-7858 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7860    TCGA-HT-7873    TCGA-HT-7874    TCGA-HT-7875    TCGA-HT-7877 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7879    TCGA-HT-7880    TCGA-HT-7881    TCGA-HT-7882    TCGA-HT-7884 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7902    TCGA-HT-8010    TCGA-HT-8011    TCGA-HT-8012    TCGA-HT-8013 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-8015    TCGA-HT-8018    TCGA-HT-8019    TCGA-HT-8104    TCGA-HT-8105 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-8106    TCGA-HT-8107    TCGA-HT-8108    TCGA-HT-8109    TCGA-HT-8110 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-8111    TCGA-HT-8113    TCGA-HT-8114    TCGA-HT-8558    TCGA-HT-8563 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-8564    TCGA-HT-A4DS    TCGA-HT-A4DV    TCGA-HT-A5R5    TCGA-HT-A5R7 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-A5R9    TCGA-HT-A5RA    TCGA-HT-A5RB    TCGA-HT-A5RC    TCGA-HT-A614 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-A615    TCGA-HT-A616    TCGA-HT-A617    TCGA-HT-A618    TCGA-HT-A619 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-A61A    TCGA-HT-A61B    TCGA-HT-A61C    TCGA-HT-A74H    TCGA-HT-A74K 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-A74L    TCGA-HT-A74O    TCGA-HW-7486    TCGA-HW-7487    TCGA-HW-7489 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HW-7490    TCGA-HW-7491    TCGA-HW-7493    TCGA-HW-7495    TCGA-HW-8319 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HW-8320    TCGA-HW-8321    TCGA-HW-8322    TCGA-HW-A5KJ    TCGA-HW-A5KK 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HW-A5KL    TCGA-HW-A5KM    TCGA-IK-7675    TCGA-IK-8125    TCGA-KT-A74X 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-KT-A7W1    TCGA-P5-A5ET    TCGA-P5-A5EU    TCGA-P5-A5EV    TCGA-P5-A5EW 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-P5-A5EX    TCGA-P5-A5EY    TCGA-P5-A5EZ    TCGA-P5-A5F0    TCGA-P5-A5F1 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-P5-A5F2    TCGA-P5-A5F4    TCGA-P5-A72U    TCGA-P5-A72W    TCGA-P5-A72X 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-P5-A72Z    TCGA-P5-A730    TCGA-P5-A731    TCGA-P5-A733    TCGA-P5-A735 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-P5-A737    TCGA-P5-A77W    TCGA-P5-A77X    TCGA-P5-A780    TCGA-P5-A781 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-QH-A65R    TCGA-QH-A65S    TCGA-QH-A65V    TCGA-QH-A65X    TCGA-QH-A65Z 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-QH-A6CS    TCGA-QH-A6CU    TCGA-QH-A6CV    TCGA-QH-A6CX    TCGA-QH-A6CY 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-QH-A6CZ    TCGA-QH-A6X3    TCGA-QH-A6X4    TCGA-QH-A6X5    TCGA-QH-A6X8 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-QH-A6X9    TCGA-QH-A6XA    TCGA-QH-A6XC    TCGA-QH-A86X    TCGA-QH-A870 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-R8-A6MK    TCGA-R8-A6ML    TCGA-R8-A6MO    TCGA-R8-A6YH    TCGA-R8-A73M 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-RY-A83X    TCGA-RY-A83Y    TCGA-RY-A83Z    TCGA-RY-A840    TCGA-RY-A843 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-RY-A845    TCGA-RY-A847    TCGA-S9-A6TS    TCGA-S9-A6TU    TCGA-S9-A6TV 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A6TW    TCGA-S9-A6TX    TCGA-S9-A6TY    TCGA-S9-A6TZ    TCGA-S9-A6U0 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A6U1    TCGA-S9-A6U2    TCGA-S9-A6U5    TCGA-S9-A6U6    TCGA-S9-A6U8 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A6UA    TCGA-S9-A6UB    TCGA-S9-A6WD    TCGA-S9-A6WE    TCGA-S9-A6WG 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A6WH    TCGA-S9-A6WI    TCGA-S9-A6WL    TCGA-S9-A6WM    TCGA-S9-A6WN 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A6WO    TCGA-S9-A6WP    TCGA-S9-A6WQ    TCGA-S9-A7IQ    TCGA-S9-A7IS 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A7IX    TCGA-S9-A7IY    TCGA-S9-A7IZ    TCGA-S9-A7J0    TCGA-S9-A7J1 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A7J2    TCGA-S9-A7J3    TCGA-S9-A7QW    TCGA-S9-A7QX    TCGA-S9-A7QY 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A7QZ    TCGA-S9-A7R1    TCGA-S9-A7R2    TCGA-S9-A7R3    TCGA-S9-A7R4 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A7R7    TCGA-S9-A7R8    TCGA-S9-A89V    TCGA-S9-A89Z    TCGA-TM-A7C3 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TM-A7C4    TCGA-TM-A7C5    TCGA-TM-A7CA    TCGA-TM-A7CF    TCGA-TM-A84B 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TM-A84C    TCGA-TM-A84F    TCGA-TM-A84G    TCGA-TM-A84H    TCGA-TM-A84I 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TM-A84J    TCGA-TM-A84L    TCGA-TM-A84M    TCGA-TM-A84O    TCGA-TM-A84Q 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TM-A84R    TCGA-TM-A84S    TCGA-TM-A84T    TCGA-TQ-A7RF    TCGA-TQ-A7RG 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TQ-A7RH    TCGA-TQ-A7RI    TCGA-TQ-A7RJ    TCGA-TQ-A7RK    TCGA-TQ-A7RM 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TQ-A7RN    TCGA-TQ-A7RO    TCGA-TQ-A7RP    TCGA-TQ-A7RQ    TCGA-TQ-A7RR 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TQ-A7RS    TCGA-TQ-A7RU    TCGA-TQ-A7RV    TCGA-TQ-A7RW    TCGA-TQ-A8XE 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-VM-A8C8    TCGA-VM-A8C9    TCGA-VM-A8CA    TCGA-VM-A8CB    TCGA-VM-A8CD 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-VM-A8CE    TCGA-VM-A8CF    TCGA-VM-A8CH    TCGA-VV-A829    TCGA-VV-A86M 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-VW-A7QS    TCGA-VW-A8FI    TCGA-W9-A837    TCGA-WH-A86K    TCGA-WY-A858 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-WY-A859    TCGA-WY-A85A    TCGA-WY-A85B    TCGA-WY-A85C    TCGA-WY-A85D 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-WY-A85E 
"LUM WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  LUM MUTATED        0      0      1      0      0      1
  LUM WILD-TYPE     99     77    119     57     63     91
D121V14, multiclass
[1] "Remove cluster labels:" "LUM MUTATED"           
clus
  LUM MUTATED LUM WILD-TYPE 
            2           506 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5281    TCGA-DB-A4X9 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD    TCGA-DB-A4XE 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L    TCGA-DB-A64O 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S    TCGA-DB-A64U 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K    TCGA-DB-A75L 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141    TCGA-DH-5142 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B    TCGA-DH-A66D 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US    TCGA-DH-A7UT 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849    TCGA-DU-5851 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855    TCGA-DU-5870 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6393    TCGA-DU-6394 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397    TCGA-DU-6399    TCGA-DU-6400 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403    TCGA-DU-6404    TCGA-DU-6405 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408    TCGA-DU-6410    TCGA-DU-6542 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008    TCGA-DU-7009    TCGA-DU-7010 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7014    TCGA-DU-7015    TCGA-DU-7018 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7292    TCGA-DU-7294    TCGA-DU-7298 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302    TCGA-DU-7304 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161    TCGA-DU-8162 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8167    TCGA-DU-8168 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS    TCGA-DU-A5TT    TCGA-DU-A5TU 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2    TCGA-DU-A6S3    TCGA-DU-A6S6 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K    TCGA-DU-A76L    TCGA-DU-A76O 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8    TCGA-DU-A7TA    TCGA-DU-A7TB 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-DU-A7TC    TCGA-DU-A7TD    TCGA-DU-A7TG    TCGA-DU-A7TI    TCGA-DU-A7TJ 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-E1-5302    TCGA-E1-5303    TCGA-E1-5304    TCGA-E1-5305    TCGA-E1-5307 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-E1-5311    TCGA-E1-5318    TCGA-E1-5319    TCGA-E1-5322    TCGA-E1-A7YD 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-E1-A7YE    TCGA-E1-A7YH    TCGA-E1-A7YI    TCGA-E1-A7YJ    TCGA-E1-A7YK 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-E1-A7YL    TCGA-E1-A7YM    TCGA-E1-A7YN    TCGA-E1-A7YO    TCGA-E1-A7YQ 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-E1-A7YS    TCGA-E1-A7YU    TCGA-E1-A7YV    TCGA-E1-A7YW    TCGA-E1-A7YY 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-E1-A7Z2    TCGA-E1-A7Z3    TCGA-E1-A7Z4    TCGA-E1-A7Z6    TCGA-EZ-7264 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-F6-A8O3    TCGA-F6-A8O4    TCGA-FG-5962    TCGA-FG-5963    TCGA-FG-5964 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-5965    TCGA-FG-6688    TCGA-FG-6689    TCGA-FG-6690    TCGA-FG-6691 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-6692    TCGA-FG-7634    TCGA-FG-7636    TCGA-FG-7637    TCGA-FG-7638 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-7641    TCGA-FG-7643    TCGA-FG-8181    TCGA-FG-8182    TCGA-FG-8185 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-8186    TCGA-FG-8187    TCGA-FG-8188    TCGA-FG-8189    TCGA-FG-8191 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-A4MT    TCGA-FG-A4MU    TCGA-FG-A4MW    TCGA-FG-A4MX    TCGA-FG-A4MY 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-A60J    TCGA-FG-A60K    TCGA-FG-A60L    TCGA-FG-A6IZ    TCGA-FG-A6J1 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-A6J3    TCGA-FG-A70Y    TCGA-FG-A70Z    TCGA-FG-A710    TCGA-FG-A711 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-FG-A713    TCGA-FG-A87N    TCGA-FG-A87Q    TCGA-FN-7833    TCGA-HT-7467 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7468    TCGA-HT-7469    TCGA-HT-7470    TCGA-HT-7471    TCGA-HT-7472 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7473    TCGA-HT-7474    TCGA-HT-7475    TCGA-HT-7476    TCGA-HT-7477 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7478    TCGA-HT-7479    TCGA-HT-7480    TCGA-HT-7481    TCGA-HT-7482 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7483    TCGA-HT-7485    TCGA-HT-7601    TCGA-HT-7602    TCGA-HT-7603 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7604    TCGA-HT-7605    TCGA-HT-7606    TCGA-HT-7607    TCGA-HT-7608 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7609    TCGA-HT-7610    TCGA-HT-7611    TCGA-HT-7616    TCGA-HT-7620 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7676    TCGA-HT-7677    TCGA-HT-7680    TCGA-HT-7681    TCGA-HT-7684 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7686    TCGA-HT-7687    TCGA-HT-7688    TCGA-HT-7689    TCGA-HT-7690 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7691    TCGA-HT-7692    TCGA-HT-7693    TCGA-HT-7694    TCGA-HT-7695 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7854    TCGA-HT-7855    TCGA-HT-7856    TCGA-HT-7857    TCGA-HT-7858 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7860    TCGA-HT-7873    TCGA-HT-7874    TCGA-HT-7875    TCGA-HT-7877 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7879    TCGA-HT-7880    TCGA-HT-7881    TCGA-HT-7882    TCGA-HT-7884 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-7902    TCGA-HT-8010    TCGA-HT-8011    TCGA-HT-8012    TCGA-HT-8013 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-8015    TCGA-HT-8018    TCGA-HT-8019    TCGA-HT-8104    TCGA-HT-8105 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-8106    TCGA-HT-8107    TCGA-HT-8108    TCGA-HT-8109    TCGA-HT-8110 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-8111    TCGA-HT-8113    TCGA-HT-8114    TCGA-HT-8558    TCGA-HT-8563 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-8564    TCGA-HT-A4DS    TCGA-HT-A4DV    TCGA-HT-A5R5    TCGA-HT-A5R7 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-A5R9    TCGA-HT-A5RA    TCGA-HT-A5RB    TCGA-HT-A5RC    TCGA-HT-A614 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-A615    TCGA-HT-A616    TCGA-HT-A617    TCGA-HT-A618    TCGA-HT-A619 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-A61A    TCGA-HT-A61B    TCGA-HT-A61C    TCGA-HT-A74H    TCGA-HT-A74K 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HT-A74L    TCGA-HT-A74O    TCGA-HW-7486    TCGA-HW-7487    TCGA-HW-7489 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HW-7490    TCGA-HW-7491    TCGA-HW-7493    TCGA-HW-7495    TCGA-HW-8319 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HW-8320    TCGA-HW-8321    TCGA-HW-8322    TCGA-HW-A5KJ    TCGA-HW-A5KK 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-HW-A5KL    TCGA-HW-A5KM    TCGA-IK-7675    TCGA-IK-8125    TCGA-KT-A74X 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-KT-A7W1    TCGA-P5-A5ET    TCGA-P5-A5EU    TCGA-P5-A5EV    TCGA-P5-A5EW 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-P5-A5EX    TCGA-P5-A5EY    TCGA-P5-A5EZ    TCGA-P5-A5F0    TCGA-P5-A5F1 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-P5-A5F2    TCGA-P5-A5F4    TCGA-P5-A72U    TCGA-P5-A72W    TCGA-P5-A72X 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-P5-A72Z    TCGA-P5-A730    TCGA-P5-A731    TCGA-P5-A733    TCGA-P5-A735 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-P5-A737    TCGA-P5-A77W    TCGA-P5-A77X    TCGA-P5-A780    TCGA-P5-A781 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-QH-A65R    TCGA-QH-A65S    TCGA-QH-A65V    TCGA-QH-A65X    TCGA-QH-A65Z 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-QH-A6CS    TCGA-QH-A6CU    TCGA-QH-A6CV    TCGA-QH-A6CX    TCGA-QH-A6CY 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-QH-A6CZ    TCGA-QH-A6X3    TCGA-QH-A6X4    TCGA-QH-A6X5    TCGA-QH-A6X8 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-QH-A6X9    TCGA-QH-A6XA    TCGA-QH-A6XC    TCGA-QH-A86X    TCGA-QH-A870 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-R8-A6MK    TCGA-R8-A6ML    TCGA-R8-A6MO    TCGA-R8-A6YH    TCGA-R8-A73M 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-RY-A83X    TCGA-RY-A83Y    TCGA-RY-A83Z    TCGA-RY-A840    TCGA-RY-A843 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-RY-A845    TCGA-RY-A847    TCGA-S9-A6TS    TCGA-S9-A6TU    TCGA-S9-A6TV 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A6TW    TCGA-S9-A6TX    TCGA-S9-A6TY    TCGA-S9-A6TZ    TCGA-S9-A6U0 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A6U1    TCGA-S9-A6U2    TCGA-S9-A6U5    TCGA-S9-A6U6    TCGA-S9-A6U8 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A6UA    TCGA-S9-A6UB    TCGA-S9-A6WD    TCGA-S9-A6WE    TCGA-S9-A6WG 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A6WH    TCGA-S9-A6WI    TCGA-S9-A6WL    TCGA-S9-A6WM    TCGA-S9-A6WN 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A6WO    TCGA-S9-A6WP    TCGA-S9-A6WQ    TCGA-S9-A7IQ    TCGA-S9-A7IS 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A7IX    TCGA-S9-A7IY    TCGA-S9-A7IZ    TCGA-S9-A7J0    TCGA-S9-A7J1 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A7J2    TCGA-S9-A7J3    TCGA-S9-A7QW    TCGA-S9-A7QX    TCGA-S9-A7QY 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A7QZ    TCGA-S9-A7R1    TCGA-S9-A7R2    TCGA-S9-A7R3    TCGA-S9-A7R4 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-S9-A7R7    TCGA-S9-A7R8    TCGA-S9-A89V    TCGA-S9-A89Z    TCGA-TM-A7C3 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TM-A7C4    TCGA-TM-A7C5    TCGA-TM-A7CA    TCGA-TM-A7CF    TCGA-TM-A84B 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TM-A84C    TCGA-TM-A84F    TCGA-TM-A84G    TCGA-TM-A84H    TCGA-TM-A84I 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TM-A84J    TCGA-TM-A84L    TCGA-TM-A84M    TCGA-TM-A84O    TCGA-TM-A84Q 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TM-A84R    TCGA-TM-A84S    TCGA-TM-A84T    TCGA-TQ-A7RF    TCGA-TQ-A7RG 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TQ-A7RH    TCGA-TQ-A7RI    TCGA-TQ-A7RJ    TCGA-TQ-A7RK    TCGA-TQ-A7RM 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TQ-A7RN    TCGA-TQ-A7RO    TCGA-TQ-A7RP    TCGA-TQ-A7RQ    TCGA-TQ-A7RR 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-TQ-A7RS    TCGA-TQ-A7RU    TCGA-TQ-A7RV    TCGA-TQ-A7RW    TCGA-TQ-A8XE 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-VM-A8C8    TCGA-VM-A8C9    TCGA-VM-A8CA    TCGA-VM-A8CB    TCGA-VM-A8CD 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-VM-A8CE    TCGA-VM-A8CF    TCGA-VM-A8CH    TCGA-VV-A829    TCGA-VV-A86M 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-VW-A7QS    TCGA-VW-A8FI    TCGA-W9-A837    TCGA-WH-A86K    TCGA-WY-A858 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-WY-A859    TCGA-WY-A85A    TCGA-WY-A85B    TCGA-WY-A85C    TCGA-WY-A85D 
"LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" "LUM WILD-TYPE" 
   TCGA-WY-A85E 
"LUM WILD-TYPE" 

Clustering(122) Variable = MYT1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYT1 MUTATED        0      0      0      0
  MYT1 WILD-TYPE     78     41     64     57
D122V1, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYT1 MUTATED        0      0      0      0
  MYT1 WILD-TYPE     63     50     48     79
D122V2, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYT1 MUTATED        0      0      0      0
  MYT1 WILD-TYPE     70     98     44     63
D122V3, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYT1 MUTATED        0      0      0
  MYT1 WILD-TYPE    138     61     76
D122V4, multiclass
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYT1 MUTATED        1      5      0
  MYT1 WILD-TYPE    291    427     62
D122V5, multiclass
        clus
vv       MYT1 MUTATED MYT1 WILD-TYPE
  CLUS_1            1            291
  CLUS_2            5            427
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYT1 MUTATED        1      3      2      0
  MYT1 WILD-TYPE    152    220     86    161
D122V6, multiclass
        clus
vv       MYT1 MUTATED MYT1 WILD-TYPE
  CLUS_1            1            152
  CLUS_2            3            220
  CLUS_3            2             86
  CLUS_4            0            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYT1 MUTATED        1      1      0      0
  MYT1 WILD-TYPE    184    154    138     95
D122V7, multiclass
[1] "Remove cluster labels:" "MYT1 MUTATED"          
clus
  MYT1 MUTATED MYT1 WILD-TYPE 
             2            571 
    TCGA-02-0003     TCGA-02-2470     TCGA-02-2485     TCGA-06-0126 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-0128     TCGA-06-0129     TCGA-06-0130     TCGA-06-0154 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-0155     TCGA-06-0189     TCGA-06-0238     TCGA-06-0644 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-0650     TCGA-06-0875     TCGA-06-0876     TCGA-06-0877 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-0878     TCGA-06-0879     TCGA-06-0882     TCGA-06-0939 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-1804     TCGA-06-1806     TCGA-06-2557     TCGA-06-2558 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-2559     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2570     TCGA-06-5408 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5301 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0862     TCGA-14-0871     TCGA-14-1823 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-16-0846     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2625     TCGA-19-2631     TCGA-19-4068 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-19-5947     TCGA-19-5950     TCGA-19-5951     TCGA-19-5952 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-19-5953     TCGA-19-5954     TCGA-19-5955     TCGA-19-5958 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-19-5959     TCGA-19-5960     TCGA-26-1442     TCGA-26-5132 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-6173     TCGA-26-6174 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1836     TCGA-27-2518     TCGA-27-2528 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2501     TCGA-28-5208 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-28-5214     TCGA-32-1970     TCGA-32-1982     TCGA-32-1986 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-32-1991     TCGA-32-4210     TCGA-32-4211     TCGA-32-5222 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-41-6646 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-74-6573     TCGA-74-6575     TCGA-74-6577     TCGA-74-6578 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-74-6584     TCGA-76-4926     TCGA-76-4927     TCGA-76-4928 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-76-4929     TCGA-76-4931     TCGA-76-4932     TCGA-76-6192 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-76-6193     TCGA-76-6282     TCGA-76-6283     TCGA-76-6285 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-CS-4938     TCGA-CS-4942     TCGA-CS-4943     TCGA-CS-4944 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394     TCGA-CS-5396 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-CS-5397     TCGA-CS-6186     TCGA-CS-6188     TCGA-CS-6665 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-CS-6666     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75M 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A66B 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7US 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7011     TCGA-DU-7012     TCGA-DU-7013 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-7014     TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7TA     TCGA-DU-A7TB 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YQ 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z6     TCGA-EZ-7264 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-7634     TCGA-FG-7636 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60L     TCGA-FG-A6IZ 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-HT-7467 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8019     TCGA-HT-8104 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8109 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8564     TCGA-HT-A4DV     TCGA-HT-A5R5 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RB     TCGA-HT-A614 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A74H 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-A74J     TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319     TCGA-HW-8320 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ     TCGA-HW-A5KK 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65S     TCGA-QH-A65V 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX     TCGA-QH-A6CY 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X4     TCGA-QH-A6X5     TCGA-QH-A6X8 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC     TCGA-QH-A86X 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML     TCGA-R8-A6MO 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-R8-A6YH     TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-S9-A6TS     TCGA-S9-A6TU 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TX     TCGA-S9-A6TY     TCGA-S9-A6U0 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-S9-A6U1     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U9 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG     TCGA-S9-A6WH 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WP     TCGA-S9-A6WQ     TCGA-S9-A7IQ 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-S9-A7IS     TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-S9-A7J1     TCGA-S9-A7J2     TCGA-S9-A7QX     TCGA-S9-A7QZ 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-S9-A7R1     TCGA-S9-A7R4     TCGA-S9-A7R8     TCGA-TM-A7C5 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TQ-A7RF     TCGA-TQ-A7RG 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-TQ-A7RH     TCGA-TQ-A7RK     TCGA-TQ-A7RN     TCGA-TQ-A7RQ 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CH 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS     TCGA-W9-A837 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-WY-A85B     TCGA-WY-A85C     TCGA-WY-A85D 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYT1 MUTATED        1      0      1
  MYT1 WILD-TYPE    204    220    147
D122V8, multiclass
[1] "Remove cluster labels:" "MYT1 MUTATED"          
clus
  MYT1 MUTATED MYT1 WILD-TYPE 
             2            571 
    TCGA-02-0003     TCGA-02-2470     TCGA-02-2485     TCGA-06-0126 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-0128     TCGA-06-0129     TCGA-06-0130     TCGA-06-0154 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-0155     TCGA-06-0189     TCGA-06-0238     TCGA-06-0644 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-0650     TCGA-06-0875     TCGA-06-0876     TCGA-06-0877 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-0878     TCGA-06-0879     TCGA-06-0882     TCGA-06-0939 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-1804     TCGA-06-1806     TCGA-06-2557     TCGA-06-2558 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-2559     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2570     TCGA-06-5408 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5301 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0862     TCGA-14-0871     TCGA-14-1823 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-16-0846     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2625     TCGA-19-2631     TCGA-19-4068 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-19-5947     TCGA-19-5950     TCGA-19-5951     TCGA-19-5952 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-19-5953     TCGA-19-5954     TCGA-19-5955     TCGA-19-5958 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-19-5959     TCGA-19-5960     TCGA-26-1442     TCGA-26-5132 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-6173     TCGA-26-6174 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1836     TCGA-27-2518     TCGA-27-2528 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2501     TCGA-28-5208 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-28-5214     TCGA-32-1970     TCGA-32-1982     TCGA-32-1986 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-32-1991     TCGA-32-4210     TCGA-32-4211     TCGA-32-5222 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-41-6646 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-74-6573     TCGA-74-6575     TCGA-74-6577     TCGA-74-6578 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-74-6584     TCGA-76-4926     TCGA-76-4927     TCGA-76-4928 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-76-4929     TCGA-76-4931     TCGA-76-4932     TCGA-76-6192 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-76-6193     TCGA-76-6282     TCGA-76-6283     TCGA-76-6285 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-CS-4938     TCGA-CS-4942     TCGA-CS-4943     TCGA-CS-4944 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394     TCGA-CS-5396 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-CS-5397     TCGA-CS-6186     TCGA-CS-6188     TCGA-CS-6665 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-CS-6666     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75M 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A66B 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7US 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7011     TCGA-DU-7012     TCGA-DU-7013 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-7014     TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7TA     TCGA-DU-A7TB 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YQ 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z6     TCGA-EZ-7264 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-7634     TCGA-FG-7636 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60L     TCGA-FG-A6IZ 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-HT-7467 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8019     TCGA-HT-8104 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8109 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8564     TCGA-HT-A4DV     TCGA-HT-A5R5 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RB     TCGA-HT-A614 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A74H 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HT-A74J     TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319     TCGA-HW-8320 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ     TCGA-HW-A5KK 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65S     TCGA-QH-A65V 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX     TCGA-QH-A6CY 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X4     TCGA-QH-A6X5     TCGA-QH-A6X8 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC     TCGA-QH-A86X 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML     TCGA-R8-A6MO 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-R8-A6YH     TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-S9-A6TS     TCGA-S9-A6TU 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TX     TCGA-S9-A6TY     TCGA-S9-A6U0 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-S9-A6U1     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U9 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG     TCGA-S9-A6WH 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WP     TCGA-S9-A6WQ     TCGA-S9-A7IQ 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-S9-A7IS     TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-S9-A7J1     TCGA-S9-A7J2     TCGA-S9-A7QX     TCGA-S9-A7QZ 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-S9-A7R1     TCGA-S9-A7R4     TCGA-S9-A7R8     TCGA-TM-A7C5 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TQ-A7RF     TCGA-TQ-A7RG 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-TQ-A7RH     TCGA-TQ-A7RK     TCGA-TQ-A7RN     TCGA-TQ-A7RQ 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CH 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS     TCGA-W9-A837 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
    TCGA-WY-A85B     TCGA-WY-A85C     TCGA-WY-A85D 
"MYT1 WILD-TYPE" "MYT1 WILD-TYPE" "MYT1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYT1 MUTATED        2      1      3
  MYT1 WILD-TYPE    236    190    225
D122V9, multiclass
        clus
vv       MYT1 MUTATED MYT1 WILD-TYPE
  CLUS_1            2            236
  CLUS_2            1            190
  CLUS_3            3            225
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYT1 MUTATED        0      5      1
  MYT1 WILD-TYPE    196    186    269
D122V10, multiclass
        clus
vv       MYT1 MUTATED MYT1 WILD-TYPE
  CLUS_1            0            196
  CLUS_2            5            186
  CLUS_3            1            269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYT1 MUTATED        0      2      1      3
  MYT1 WILD-TYPE    140    105     82    179
D122V11, multiclass
        clus
vv       MYT1 MUTATED MYT1 WILD-TYPE
  CLUS_1            0            140
  CLUS_2            2            105
  CLUS_3            1             82
  CLUS_4            3            179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYT1 MUTATED        2      2      2
  MYT1 WILD-TYPE    221    184    101
D122V12, multiclass
        clus
vv       MYT1 MUTATED MYT1 WILD-TYPE
  CLUS_1            2            221
  CLUS_2            2            184
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYT1 MUTATED        1      1      1      3
  MYT1 WILD-TYPE    126    118    105    153
D122V13, multiclass
        clus
vv       MYT1 MUTATED MYT1 WILD-TYPE
  CLUS_1            1            126
  CLUS_2            1            118
  CLUS_3            1            105
  CLUS_4            3            153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  MYT1 MUTATED        2      1      2      0      0      1
  MYT1 WILD-TYPE     97     76    118     57     63     91
D122V14, multiclass
        clus
vv       MYT1 MUTATED MYT1 WILD-TYPE
  CLUS_1            2             97
  CLUS_2            1             76
  CLUS_3            2            118
  CLUS_4            0             57
  CLUS_5            0             63
  CLUS_6            1             91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(123) Variable = KCNJ15 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNJ15 MUTATED        0      0      0      1
  KCNJ15 WILD-TYPE     78     41     64     56
D123V1, multiclass
[1] "Remove cluster labels:" "KCNJ15 MUTATED"        
clus
  KCNJ15 MUTATED KCNJ15 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNJ15 MUTATED        0      0      0      1
  KCNJ15 WILD-TYPE     63     50     48     78
D123V2, multiclass
[1] "Remove cluster labels:" "KCNJ15 MUTATED"        
clus
  KCNJ15 MUTATED KCNJ15 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNJ15 MUTATED        1      0      0      0
  KCNJ15 WILD-TYPE     69     98     44     63
D123V3, multiclass
[1] "Remove cluster labels:" "KCNJ15 MUTATED"        
clus
  KCNJ15 MUTATED KCNJ15 WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-1806 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KCNJ15 MUTATED        0      0      1
  KCNJ15 WILD-TYPE    138     61     75
D123V4, multiclass
[1] "Remove cluster labels:" "KCNJ15 MUTATED"        
clus
  KCNJ15 MUTATED KCNJ15 WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-1806 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KCNJ15 MUTATED        1      3      0
  KCNJ15 WILD-TYPE    291    429     62
D123V5, multiclass
        clus
vv       KCNJ15 MUTATED KCNJ15 WILD-TYPE
  CLUS_1              1              291
  CLUS_2              3              429
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNJ15 MUTATED        0      2      0      1
  KCNJ15 WILD-TYPE    153    221     88    160
D123V6, multiclass
        clus
vv       KCNJ15 MUTATED KCNJ15 WILD-TYPE
  CLUS_1              0              153
  CLUS_2              2              221
  CLUS_3              0               88
  CLUS_4              1              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNJ15 MUTATED        2      0      0      0
  KCNJ15 WILD-TYPE    183    155    138     95
D123V7, multiclass
[1] "Remove cluster labels:" "KCNJ15 MUTATED"        
clus
  KCNJ15 MUTATED KCNJ15 WILD-TYPE 
               2              571 
      TCGA-02-0003       TCGA-02-2470       TCGA-02-2485       TCGA-06-0126 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0128       TCGA-06-0129       TCGA-06-0130       TCGA-06-0154 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0155       TCGA-06-0189       TCGA-06-0238       TCGA-06-0644 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0650       TCGA-06-0875       TCGA-06-0876       TCGA-06-0877 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0878       TCGA-06-0879       TCGA-06-0882       TCGA-06-0939 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-1804       TCGA-06-1806       TCGA-06-2557       TCGA-06-2558 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-2559       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2570       TCGA-06-5408 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5301 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0862       TCGA-14-0871       TCGA-14-1823 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-16-0846       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2625       TCGA-19-2631       TCGA-19-4068 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-5953       TCGA-19-5954       TCGA-19-5955       TCGA-19-5958 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-5959       TCGA-19-5960       TCGA-26-1442       TCGA-26-5132 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-6173       TCGA-26-6174 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1836       TCGA-27-2518       TCGA-27-2528 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2501       TCGA-28-5208 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-5214       TCGA-32-1970       TCGA-32-1982       TCGA-32-1986 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-4210       TCGA-32-4211       TCGA-32-5222 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-41-6646 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-74-6573       TCGA-74-6575       TCGA-74-6577       TCGA-74-6578 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-74-6584       TCGA-76-4926       TCGA-76-4927       TCGA-76-4928 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-4929       TCGA-76-4931       TCGA-76-4932       TCGA-76-6192 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-6193       TCGA-76-6282       TCGA-76-6283       TCGA-76-6285 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-CS-4938       TCGA-CS-4942       TCGA-CS-4943       TCGA-CS-4944 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394       TCGA-CS-5396 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-CS-5397       TCGA-CS-6186       TCGA-CS-6188       TCGA-CS-6665 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-CS-6666       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64O 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75M       TCGA-DB-A75O 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A66B       TCGA-DH-A66D 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7US       TCGA-DU-5847 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7011       TCGA-DU-7012       TCGA-DU-7013 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-7014       TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7290 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7300 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S8 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-A7T6       TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TD 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TI       TCGA-DU-A7TJ       TCGA-E1-5302 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YL 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YQ       TCGA-E1-A7YS 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-FG-6691       TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-FG-A60J       TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J3 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A713 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-HT-7467       TCGA-HT-7468 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8109 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-8558       TCGA-HT-8564       TCGA-HT-A4DV       TCGA-HT-A5R5 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RB       TCGA-HT-A614 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A74H 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-A74J       TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HW-7493       TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65S       TCGA-QH-A65V 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS       TCGA-QH-A6CU 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-QH-A6CV       TCGA-QH-A6CW       TCGA-QH-A6CX       TCGA-QH-A6CY 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-QH-A6CZ       TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-R8-A6YH       TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-S9-A6TS       TCGA-S9-A6TU 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-S9-A6TV       TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6U0 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-S9-A6U1       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U9 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-S9-A6WD       TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-S9-A6WN       TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-S9-A7IS       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7QX       TCGA-S9-A7QZ 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-S9-A7R1       TCGA-S9-A7R4       TCGA-S9-A7R8       TCGA-TM-A7C5 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-TM-A84R       TCGA-TM-A84S       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RK       TCGA-TQ-A7RN       TCGA-TQ-A7RQ 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RV       TCGA-TQ-A7RW 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9       TCGA-VM-A8CA 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE       TCGA-VM-A8CH 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-VV-A829       TCGA-VV-A86M       TCGA-VW-A7QS       TCGA-W9-A837 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KCNJ15 MUTATED        1      1      0
  KCNJ15 WILD-TYPE    204    219    148
D123V8, multiclass
[1] "Remove cluster labels:" "KCNJ15 MUTATED"        
clus
  KCNJ15 MUTATED KCNJ15 WILD-TYPE 
               2              571 
      TCGA-02-0003       TCGA-02-2470       TCGA-02-2485       TCGA-06-0126 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0128       TCGA-06-0129       TCGA-06-0130       TCGA-06-0154 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0155       TCGA-06-0189       TCGA-06-0238       TCGA-06-0644 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0650       TCGA-06-0875       TCGA-06-0876       TCGA-06-0877 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-0878       TCGA-06-0879       TCGA-06-0882       TCGA-06-0939 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-1804       TCGA-06-1806       TCGA-06-2557       TCGA-06-2558 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-2559       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2570       TCGA-06-5408 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5301 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0862       TCGA-14-0871       TCGA-14-1823 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-16-0846       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2625       TCGA-19-2631       TCGA-19-4068 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-5953       TCGA-19-5954       TCGA-19-5955       TCGA-19-5958 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-19-5959       TCGA-19-5960       TCGA-26-1442       TCGA-26-5132 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-6173       TCGA-26-6174 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1836       TCGA-27-2518       TCGA-27-2528 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2501       TCGA-28-5208 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-28-5214       TCGA-32-1970       TCGA-32-1982       TCGA-32-1986 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-4210       TCGA-32-4211       TCGA-32-5222 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-41-6646 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-74-6573       TCGA-74-6575       TCGA-74-6577       TCGA-74-6578 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-74-6584       TCGA-76-4926       TCGA-76-4927       TCGA-76-4928 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-4929       TCGA-76-4931       TCGA-76-4932       TCGA-76-6192 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-6193       TCGA-76-6282       TCGA-76-6283       TCGA-76-6285 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-CS-4938       TCGA-CS-4942       TCGA-CS-4943       TCGA-CS-4944 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394       TCGA-CS-5396 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-CS-5397       TCGA-CS-6186       TCGA-CS-6188       TCGA-CS-6665 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-CS-6666       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64O 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75M       TCGA-DB-A75O 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A66B       TCGA-DH-A66D 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7US       TCGA-DU-5847 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7011       TCGA-DU-7012       TCGA-DU-7013 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-7014       TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7290 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7300 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304       TCGA-DU-7306 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161       TCGA-DU-8162 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165       TCGA-DU-8166 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP       TCGA-DU-A5TR 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU       TCGA-DU-A5TW 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3       TCGA-DU-A6S8 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-A7T6       TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TD 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-DU-A7TG       TCGA-DU-A7TI       TCGA-DU-A7TJ       TCGA-E1-5302 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305       TCGA-E1-5307 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319       TCGA-E1-5322 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YL 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YQ       TCGA-E1-A7YS 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-E1-A7YV       TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-E1-A7Z3       TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-FG-6691       TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-FG-A60J       TCGA-FG-A60L       TCGA-FG-A6IZ       TCGA-FG-A6J3 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-FG-A70Y       TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A713 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-HT-7467       TCGA-HT-7468 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8109 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113       TCGA-HT-8114 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-8558       TCGA-HT-8564       TCGA-HT-A4DV       TCGA-HT-A5R5 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RB       TCGA-HT-A614 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617       TCGA-HT-A618 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B       TCGA-HT-A74H 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HT-A74J       TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HW-7487       TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HW-7493       TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HW-8321       TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EW 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65S       TCGA-QH-A65V 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS       TCGA-QH-A6CU 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-QH-A6CV       TCGA-QH-A6CW       TCGA-QH-A6CX       TCGA-QH-A6CY 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-QH-A6CZ       TCGA-QH-A6X4       TCGA-QH-A6X5       TCGA-QH-A6X8 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC       TCGA-QH-A86X 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML       TCGA-R8-A6MO 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-R8-A6YH       TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-S9-A6TS       TCGA-S9-A6TU 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-S9-A6TV       TCGA-S9-A6TX       TCGA-S9-A6TY       TCGA-S9-A6U0 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-S9-A6U1       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U9 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-S9-A6WD       TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-S9-A6WN       TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-S9-A7IS       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7QX       TCGA-S9-A7QZ 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-S9-A7R1       TCGA-S9-A7R4       TCGA-S9-A7R8       TCGA-TM-A7C5 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-TM-A84R       TCGA-TM-A84S       TCGA-TQ-A7RF       TCGA-TQ-A7RG 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-TQ-A7RH       TCGA-TQ-A7RK       TCGA-TQ-A7RN       TCGA-TQ-A7RQ 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RV       TCGA-TQ-A7RW 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9       TCGA-VM-A8CA 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE       TCGA-VM-A8CH 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-VV-A829       TCGA-VV-A86M       TCGA-VW-A7QS       TCGA-W9-A837 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
      TCGA-WY-A85B       TCGA-WY-A85C       TCGA-WY-A85D 
"KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" "KCNJ15 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KCNJ15 MUTATED        1      2      1
  KCNJ15 WILD-TYPE    237    189    227
D123V9, multiclass
        clus
vv       KCNJ15 MUTATED KCNJ15 WILD-TYPE
  CLUS_1              1              237
  CLUS_2              2              189
  CLUS_3              1              227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KCNJ15 MUTATED        1      1      2
  KCNJ15 WILD-TYPE    195    190    268
D123V10, multiclass
        clus
vv       KCNJ15 MUTATED KCNJ15 WILD-TYPE
  CLUS_1              1              195
  CLUS_2              1              190
  CLUS_3              2              268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNJ15 MUTATED        0      0      0      3
  KCNJ15 WILD-TYPE    140    107     83    179
D123V11, multiclass
        clus
vv       KCNJ15 MUTATED KCNJ15 WILD-TYPE
  CLUS_1              0              140
  CLUS_2              0              107
  CLUS_3              0               83
  CLUS_4              3              179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KCNJ15 MUTATED        0      3      0
  KCNJ15 WILD-TYPE    223    183    103
D123V12, multiclass
        clus
vv       KCNJ15 MUTATED KCNJ15 WILD-TYPE
  CLUS_1              0              223
  CLUS_2              3              183
  CLUS_3              0              103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNJ15 MUTATED        0      0      0      3
  KCNJ15 WILD-TYPE    127    119    106    153
D123V13, multiclass
        clus
vv       KCNJ15 MUTATED KCNJ15 WILD-TYPE
  CLUS_1              0              127
  CLUS_2              0              119
  CLUS_3              0              106
  CLUS_4              3              153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  KCNJ15 MUTATED        0      0      2      0      0      1
  KCNJ15 WILD-TYPE     99     77    118     57     63     91
D123V14, multiclass
        clus
vv       KCNJ15 MUTATED KCNJ15 WILD-TYPE
  CLUS_1              0               99
  CLUS_2              0               77
  CLUS_3              2              118
  CLUS_4              0               57
  CLUS_5              0               63
  CLUS_6              1               91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(124) Variable = GFRA4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GFRA4 MUTATED        0      0      1      1
  GFRA4 WILD-TYPE     78     41     63     56
D124V1, multiclass
[1] "Remove cluster labels:" "GFRA4 MUTATED"         
clus
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2629      TCGA-19-2631      TCGA-19-4068 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5959      TCGA-19-5960 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4926 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GFRA4 MUTATED        0      1      0      1
  GFRA4 WILD-TYPE     63     49     48     78
D124V2, multiclass
[1] "Remove cluster labels:" "GFRA4 MUTATED"         
clus
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2629      TCGA-19-2631      TCGA-19-4068 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5959      TCGA-19-5960 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4926 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GFRA4 MUTATED        1      1      0      0
  GFRA4 WILD-TYPE     69     97     44     63
D124V3, multiclass
[1] "Remove cluster labels:" "GFRA4 MUTATED"         
clus
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5959      TCGA-19-5960 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4926 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-87-5896 
"GFRA4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GFRA4 MUTATED        0      0      2
  GFRA4 WILD-TYPE    138     61     74
D124V4, multiclass
[1] "Remove cluster labels:" "GFRA4 MUTATED"         
clus
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5959      TCGA-19-5960 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4926 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-87-5896 
"GFRA4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GFRA4 MUTATED        2      1      0
  GFRA4 WILD-TYPE    290    431     62
D124V5, multiclass
        clus
vv       GFRA4 MUTATED GFRA4 WILD-TYPE
  CLUS_1             2             290
  CLUS_2             1             431
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GFRA4 MUTATED        2      1      0      0
  GFRA4 WILD-TYPE    151    222     88    161
D124V6, multiclass
        clus
vv       GFRA4 MUTATED GFRA4 WILD-TYPE
  CLUS_1             2             151
  CLUS_2             1             222
  CLUS_3             0              88
  CLUS_4             0             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GFRA4 MUTATED        0      1      0      1
  GFRA4 WILD-TYPE    185    154    138     94
D124V7, multiclass
[1] "Remove cluster labels:" "GFRA4 MUTATED"         
clus
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              2             571 
     TCGA-02-0003      TCGA-02-2470      TCGA-02-2485      TCGA-06-0126 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0128      TCGA-06-0129      TCGA-06-0130      TCGA-06-0154 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0155      TCGA-06-0189      TCGA-06-0238      TCGA-06-0644 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0650      TCGA-06-0875      TCGA-06-0876      TCGA-06-0877 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0879      TCGA-06-0882      TCGA-06-0939 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-1804      TCGA-06-1806      TCGA-06-2557      TCGA-06-2558 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2559      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2570      TCGA-06-5408 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-0692      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5301 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0862      TCGA-14-0871      TCGA-14-1823 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-16-0846      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2625      TCGA-19-2631      TCGA-19-4068 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5953      TCGA-19-5954      TCGA-19-5955      TCGA-19-5959 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-6173      TCGA-26-6174      TCGA-27-1830 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-2518      TCGA-27-2528      TCGA-28-1747 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2501      TCGA-28-5208      TCGA-28-5214 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-5222      TCGA-41-2573 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-41-6646      TCGA-74-6573 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-74-6575      TCGA-74-6577      TCGA-74-6578      TCGA-74-6584 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-6192      TCGA-76-6193 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6656 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-CS-4938 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-4942      TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-5393      TCGA-CS-5394      TCGA-CS-5396      TCGA-CS-5397 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6665      TCGA-CS-6666 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5280 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M      TCGA-DB-A75O 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A66B      TCGA-DH-A66D 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7US      TCGA-DU-5847 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7011      TCGA-DU-7012      TCGA-DU-7013 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7014      TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7TA      TCGA-DU-A7TB 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YQ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z6      TCGA-EZ-7264 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-7634      TCGA-FG-7636 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8186      TCGA-FG-8187 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A713 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-HT-7467      TCGA-HT-7468 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8109 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8564      TCGA-HT-A4DV      TCGA-HT-A5R5 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RB      TCGA-HT-A614 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A74H 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A74J      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65S      TCGA-QH-A65V 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX      TCGA-QH-A6CY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-R8-A6YH      TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-S9-A6TS      TCGA-S9-A6TU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6U0 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6U1      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U9 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7IS      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7QX      TCGA-S9-A7QZ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7R1      TCGA-S9-A7R4      TCGA-S9-A7R8      TCGA-TM-A7C5 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RK      TCGA-TQ-A7RN      TCGA-TQ-A7RQ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CH 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-W9-A837 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GFRA4 MUTATED        1      1      0
  GFRA4 WILD-TYPE    204    219    148
D124V8, multiclass
[1] "Remove cluster labels:" "GFRA4 MUTATED"         
clus
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              2             571 
     TCGA-02-0003      TCGA-02-2470      TCGA-02-2485      TCGA-06-0126 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0128      TCGA-06-0129      TCGA-06-0130      TCGA-06-0154 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0155      TCGA-06-0189      TCGA-06-0238      TCGA-06-0644 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0650      TCGA-06-0875      TCGA-06-0876      TCGA-06-0877 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0879      TCGA-06-0882      TCGA-06-0939 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-1804      TCGA-06-1806      TCGA-06-2557      TCGA-06-2558 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2559      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2570      TCGA-06-5408 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-0692      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5301 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0862      TCGA-14-0871      TCGA-14-1823 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-16-0846      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2625      TCGA-19-2631      TCGA-19-4068 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5953      TCGA-19-5954      TCGA-19-5955      TCGA-19-5959 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-6173      TCGA-26-6174      TCGA-27-1830 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-2518      TCGA-27-2528      TCGA-28-1747 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2501      TCGA-28-5208      TCGA-28-5214 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-5222      TCGA-41-2573 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-41-6646      TCGA-74-6573 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-74-6575      TCGA-74-6577      TCGA-74-6578      TCGA-74-6584 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-6192      TCGA-76-6193 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6656 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-CS-4938 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-4942      TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-5393      TCGA-CS-5394      TCGA-CS-5396      TCGA-CS-5397 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6665      TCGA-CS-6666 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5280 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M      TCGA-DB-A75O 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A66B      TCGA-DH-A66D 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7US      TCGA-DU-5847 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7011      TCGA-DU-7012      TCGA-DU-7013 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7014      TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7TA      TCGA-DU-A7TB 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YQ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z6      TCGA-EZ-7264 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-7634      TCGA-FG-7636 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8186      TCGA-FG-8187 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A713 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-HT-7467      TCGA-HT-7468 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8109 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8564      TCGA-HT-A4DV      TCGA-HT-A5R5 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RB      TCGA-HT-A614 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A74H 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A74J      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65S      TCGA-QH-A65V 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX      TCGA-QH-A6CY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-R8-A6YH      TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-S9-A6TS      TCGA-S9-A6TU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6U0 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6U1      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U9 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7IS      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7QX      TCGA-S9-A7QZ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7R1      TCGA-S9-A7R4      TCGA-S9-A7R8      TCGA-TM-A7C5 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RK      TCGA-TQ-A7RN      TCGA-TQ-A7RQ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CH 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-W9-A837 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GFRA4 MUTATED        1      0      1
  GFRA4 WILD-TYPE    237    191    227
D124V9, multiclass
[1] "Remove cluster labels:" "GFRA4 MUTATED"         
clus
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              2             655 
     TCGA-02-0047      TCGA-02-0055      TCGA-02-2483      TCGA-02-2485 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-02-2486      TCGA-06-0129      TCGA-06-0130      TCGA-06-0132 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0157      TCGA-06-0158      TCGA-06-0168 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0174      TCGA-06-0178      TCGA-06-0184      TCGA-06-0219 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0238      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0649      TCGA-06-0686      TCGA-06-0743      TCGA-06-0744 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0745      TCGA-06-0747      TCGA-06-0749      TCGA-06-0750 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0882      TCGA-06-1804      TCGA-06-2557 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-08-0386      TCGA-12-0616 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0821      TCGA-12-1597 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-5299      TCGA-14-0781      TCGA-14-0787      TCGA-14-0789 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0817      TCGA-14-1823      TCGA-14-1825 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-15-0742      TCGA-15-1444 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-1045      TCGA-19-1390      TCGA-19-2619 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1834 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1837      TCGA-27-2519      TCGA-27-2521 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2528 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2499      TCGA-28-2509 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-2510      TCGA-28-2513      TCGA-28-2514      TCGA-28-5204 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5213 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5220 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1980      TCGA-32-1982      TCGA-32-2615 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4213 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-3915 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4926      TCGA-76-4927 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4928      TCGA-76-4929      TCGA-76-4931      TCGA-76-4932 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014      TCGA-DU-7015 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A74J      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6      TCGA-P5-A72U 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A736 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX      TCGA-QH-A6CY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GFRA4 MUTATED        1      1      0
  GFRA4 WILD-TYPE    195    190    270
D124V10, multiclass
[1] "Remove cluster labels:" "GFRA4 MUTATED"         
clus
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              2             655 
     TCGA-02-0047      TCGA-02-0055      TCGA-02-2483      TCGA-02-2485 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-02-2486      TCGA-06-0129      TCGA-06-0130      TCGA-06-0132 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0157      TCGA-06-0158      TCGA-06-0168 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0174      TCGA-06-0178      TCGA-06-0184      TCGA-06-0219 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0238      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0649      TCGA-06-0686      TCGA-06-0743      TCGA-06-0744 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0745      TCGA-06-0747      TCGA-06-0749      TCGA-06-0750 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0882      TCGA-06-1804      TCGA-06-2557 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-08-0386      TCGA-12-0616 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0821      TCGA-12-1597 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-12-5299      TCGA-14-0781      TCGA-14-0787      TCGA-14-0789 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0817      TCGA-14-1823      TCGA-14-1825 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-15-0742      TCGA-15-1444 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-1045      TCGA-19-1390      TCGA-19-2619 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1834 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1837      TCGA-27-2519      TCGA-27-2521 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2528 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2499      TCGA-28-2509 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-2510      TCGA-28-2513      TCGA-28-2514      TCGA-28-5204 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5213 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5220 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1980      TCGA-32-1982      TCGA-32-2615 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4213 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-3915 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4926      TCGA-76-4927 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-76-4928      TCGA-76-4929      TCGA-76-4931      TCGA-76-4932 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014      TCGA-DU-7015 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A74J      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6      TCGA-P5-A72U 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A736 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX      TCGA-QH-A6CY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GFRA4 MUTATED        0      1      0      0
  GFRA4 WILD-TYPE    140    106     83    182
D124V11, multiclass
[1] "Remove cluster labels:" "GFRA4 MUTATED"         
clus
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              1             511 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7014      TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8186      TCGA-FG-8187 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GFRA4 MUTATED        1      0      0
  GFRA4 WILD-TYPE    222    186    103
D124V12, multiclass
[1] "Remove cluster labels:" "GFRA4 MUTATED"         
clus
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              1             511 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7014      TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8186      TCGA-FG-8187 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GFRA4 MUTATED        1      0      0      0
  GFRA4 WILD-TYPE    126    119    106    156
D124V13, multiclass
[1] "Remove cluster labels:" "GFRA4 MUTATED"         
clus
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              1             507 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  GFRA4 MUTATED        1      0      0      0      0      0
  GFRA4 WILD-TYPE     98     77    120     57     63     92
D124V14, multiclass
[1] "Remove cluster labels:" "GFRA4 MUTATED"         
clus
  GFRA4 MUTATED GFRA4 WILD-TYPE 
              1             507 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" "GFRA4 WILD-TYPE" 

Clustering(125) Variable = DLC1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLC1 MUTATED        1      0      1      1
  DLC1 WILD-TYPE     77     41     63     56
D125V1, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            1             77
  CLUS_2            0             41
  CLUS_3            1             63
  CLUS_4            1             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLC1 MUTATED        0      1      2      0
  DLC1 WILD-TYPE     63     49     46     79
D125V2, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            0             63
  CLUS_2            1             49
  CLUS_3            2             46
  CLUS_4            0             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLC1 MUTATED        1      0      1      1
  DLC1 WILD-TYPE     69     98     43     62
D125V3, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            1             69
  CLUS_2            0             98
  CLUS_3            1             43
  CLUS_4            1             62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DLC1 MUTATED        1      2      0
  DLC1 WILD-TYPE    137     59     76
D125V4, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            1            137
  CLUS_2            2             59
  CLUS_3            0             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DLC1 MUTATED        6      2      0
  DLC1 WILD-TYPE    286    430     62
D125V5, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            6            286
  CLUS_2            2            430
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLC1 MUTATED        4      2      0      1
  DLC1 WILD-TYPE    149    221     88    160
D125V6, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            4            149
  CLUS_2            2            221
  CLUS_3            0             88
  CLUS_4            1            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLC1 MUTATED        2      1      2      2
  DLC1 WILD-TYPE    183    154    136     93
D125V7, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            2            183
  CLUS_2            1            154
  CLUS_3            2            136
  CLUS_4            2             93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DLC1 MUTATED        2      3      2
  DLC1 WILD-TYPE    203    217    146
D125V8, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            2            203
  CLUS_2            3            217
  CLUS_3            2            146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DLC1 MUTATED        5      1      2
  DLC1 WILD-TYPE    233    190    226
D125V9, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            5            233
  CLUS_2            1            190
  CLUS_3            2            226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DLC1 MUTATED        4      3      1
  DLC1 WILD-TYPE    192    188    269
D125V10, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            4            192
  CLUS_2            3            188
  CLUS_3            1            269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLC1 MUTATED        1      2      1      2
  DLC1 WILD-TYPE    139    105     82    180
D125V11, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            1            139
  CLUS_2            2            105
  CLUS_3            1             82
  CLUS_4            2            180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DLC1 MUTATED        1      2      3
  DLC1 WILD-TYPE    222    184    100
D125V12, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            1            222
  CLUS_2            2            184
  CLUS_3            3            100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLC1 MUTATED        2      1      0      3
  DLC1 WILD-TYPE    125    118    106    153
D125V13, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            2            125
  CLUS_2            1            118
  CLUS_3            0            106
  CLUS_4            3            153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DLC1 MUTATED        0      0      0      0      2      4
  DLC1 WILD-TYPE     99     77    120     57     61     88
D125V14, multiclass
        clus
vv       DLC1 MUTATED DLC1 WILD-TYPE
  CLUS_1            0             99
  CLUS_2            0             77
  CLUS_3            0            120
  CLUS_4            0             57
  CLUS_5            2             61
  CLUS_6            4             88
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(126) Variable = TMPRSS6 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMPRSS6 MUTATED        3      0      2      1
  TMPRSS6 WILD-TYPE     75     41     62     56
D126V1, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               3                75
  CLUS_2               0                41
  CLUS_3               2                62
  CLUS_4               1                56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMPRSS6 MUTATED        3      1      1      1
  TMPRSS6 WILD-TYPE     60     49     47     78
D126V2, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               3                60
  CLUS_2               1                49
  CLUS_3               1                47
  CLUS_4               1                78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMPRSS6 MUTATED        2      1      1      2
  TMPRSS6 WILD-TYPE     68     97     43     61
D126V3, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               2                68
  CLUS_2               1                97
  CLUS_3               1                43
  CLUS_4               2                61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMPRSS6 MUTATED        2      3      1
  TMPRSS6 WILD-TYPE    136     58     75
D126V4, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               2               136
  CLUS_2               3                58
  CLUS_3               1                75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMPRSS6 MUTATED        8      1      0
  TMPRSS6 WILD-TYPE    284    431     62
D126V5, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               8               284
  CLUS_2               1               431
  CLUS_3               0                62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMPRSS6 MUTATED        5      1      0      0
  TMPRSS6 WILD-TYPE    148    222     88    161
D126V6, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               5               148
  CLUS_2               1               222
  CLUS_3               0                88
  CLUS_4               0               161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMPRSS6 MUTATED        4      1      2      0
  TMPRSS6 WILD-TYPE    181    154    136     95
D126V7, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               4               181
  CLUS_2               1               154
  CLUS_3               2               136
  CLUS_4               0                95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMPRSS6 MUTATED        5      2      0
  TMPRSS6 WILD-TYPE    200    218    148
D126V8, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               5               200
  CLUS_2               2               218
  CLUS_3               0               148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMPRSS6 MUTATED        8      0      1
  TMPRSS6 WILD-TYPE    230    191    227
D126V9, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               8               230
  CLUS_2               0               191
  CLUS_3               1               227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMPRSS6 MUTATED        6      3      0
  TMPRSS6 WILD-TYPE    190    188    270
D126V10, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               6               190
  CLUS_2               3               188
  CLUS_3               0               270
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMPRSS6 MUTATED        1      2      0      0
  TMPRSS6 WILD-TYPE    139    105     83    182
D126V11, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               1               139
  CLUS_2               2               105
  CLUS_3               0                83
  CLUS_4               0               182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMPRSS6 MUTATED        1      0      2
  TMPRSS6 WILD-TYPE    222    186    101
D126V12, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               1               222
  CLUS_2               0               186
  CLUS_3               2               101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMPRSS6 MUTATED        2      0      0      1
  TMPRSS6 WILD-TYPE    125    119    106    155
D126V13, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               2               125
  CLUS_2               0               119
  CLUS_3               0               106
  CLUS_4               1               155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  TMPRSS6 MUTATED        1      0      0      0      1      1
  TMPRSS6 WILD-TYPE     98     77    120     57     62     91
D126V14, multiclass
        clus
vv       TMPRSS6 MUTATED TMPRSS6 WILD-TYPE
  CLUS_1               1                98
  CLUS_2               0                77
  CLUS_3               0               120
  CLUS_4               0                57
  CLUS_5               1                62
  CLUS_6               1                91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(127) Variable = DLX6 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLX6 MUTATED        0      0      0      1
  DLX6 WILD-TYPE     78     41     64     56
D127V1, multiclass
[1] "Remove cluster labels:" "DLX6 MUTATED"          
clus
  DLX6 MUTATED DLX6 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0781     TCGA-14-0786     TCGA-14-0787 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-14-0789     TCGA-14-0790     TCGA-14-0813     TCGA-14-0817 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1456     TCGA-14-1823     TCGA-14-1825 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-14-3476     TCGA-14-4157 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-15-0742     TCGA-15-1444     TCGA-16-0846     TCGA-16-0861 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-16-1045     TCGA-16-1048     TCGA-19-1390     TCGA-19-1790 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-19-2619     TCGA-19-2620     TCGA-19-2623     TCGA-19-2624 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-19-2625     TCGA-19-2629     TCGA-19-2631     TCGA-19-4068 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-19-5947     TCGA-19-5950     TCGA-19-5951     TCGA-19-5952 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-19-5954     TCGA-19-5955     TCGA-19-5958     TCGA-19-5959 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1439     TCGA-26-1442     TCGA-26-5132 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-5135     TCGA-26-5136 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-26-5139     TCGA-27-1830     TCGA-27-1831     TCGA-27-1832 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-27-1833     TCGA-27-1834     TCGA-27-1835     TCGA-27-1836 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-27-1837     TCGA-27-1838     TCGA-27-2518     TCGA-27-2519 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-27-2521     TCGA-27-2523     TCGA-27-2524     TCGA-27-2526 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-27-2527     TCGA-27-2528     TCGA-28-1747     TCGA-28-1753 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-28-2501     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5213     TCGA-28-5214 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5219 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-28-5220     TCGA-28-6450     TCGA-32-1970     TCGA-32-1977 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-32-1979     TCGA-32-1980     TCGA-32-1982     TCGA-32-1986 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-32-1991     TCGA-32-2491     TCGA-32-2494     TCGA-32-2495 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-32-2615     TCGA-32-2632     TCGA-32-2634     TCGA-32-2638 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-32-4208     TCGA-32-4209     TCGA-32-4210     TCGA-32-4213 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLX6 MUTATED        0      0      0      1
  DLX6 WILD-TYPE     63     50     48     78
D127V2, multiclass
[1] "Remove cluster labels:" "DLX6 MUTATED"          
clus
  DLX6 MUTATED DLX6 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0781     TCGA-14-0786     TCGA-14-0787 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-14-0789     TCGA-14-0790     TCGA-14-0813     TCGA-14-0817 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1456     TCGA-14-1823     TCGA-14-1825 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-14-3476     TCGA-14-4157 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-15-0742     TCGA-15-1444     TCGA-16-0846     TCGA-16-0861 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-16-1045     TCGA-16-1048     TCGA-19-1390     TCGA-19-1790 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-19-2619     TCGA-19-2620     TCGA-19-2623     TCGA-19-2624 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-19-2625     TCGA-19-2629     TCGA-19-2631     TCGA-19-4068 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-19-5947     TCGA-19-5950     TCGA-19-5951     TCGA-19-5952 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-19-5954     TCGA-19-5955     TCGA-19-5958     TCGA-19-5959 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1439     TCGA-26-1442     TCGA-26-5132 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-5135     TCGA-26-5136 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-26-5139     TCGA-27-1830     TCGA-27-1831     TCGA-27-1832 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-27-1833     TCGA-27-1834     TCGA-27-1835     TCGA-27-1836 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-27-1837     TCGA-27-1838     TCGA-27-2518     TCGA-27-2519 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-27-2521     TCGA-27-2523     TCGA-27-2524     TCGA-27-2526 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-27-2527     TCGA-27-2528     TCGA-28-1747     TCGA-28-1753 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-28-2501     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5213     TCGA-28-5214 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5219 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-28-5220     TCGA-28-6450     TCGA-32-1970     TCGA-32-1977 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-32-1979     TCGA-32-1980     TCGA-32-1982     TCGA-32-1986 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-32-1991     TCGA-32-2491     TCGA-32-2494     TCGA-32-2495 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-32-2615     TCGA-32-2632     TCGA-32-2634     TCGA-32-2638 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-32-4208     TCGA-32-4209     TCGA-32-4210     TCGA-32-4213 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLX6 MUTATED        0      1      0      0
  DLX6 WILD-TYPE     70     97     44     63
D127V3, multiclass
[1] "Remove cluster labels:" "DLX6 MUTATED"          
clus
  DLX6 MUTATED DLX6 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5953 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-19-5954     TCGA-19-5955     TCGA-19-5958     TCGA-19-5959 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1439     TCGA-26-1442     TCGA-26-5132 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-5135     TCGA-26-5136 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-26-5139     TCGA-26-6173     TCGA-26-6174     TCGA-27-1830 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1836     TCGA-27-1837     TCGA-27-1838 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-27-2518     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2527     TCGA-27-2528 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2502     TCGA-28-2509 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-28-2510     TCGA-28-2513     TCGA-28-2514     TCGA-28-5204 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5211 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DLX6 MUTATED        0      0      1
  DLX6 WILD-TYPE    138     61     75
D127V4, multiclass
[1] "Remove cluster labels:" "DLX6 MUTATED"          
clus
  DLX6 MUTATED DLX6 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5953 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-19-5954     TCGA-19-5955     TCGA-19-5958     TCGA-19-5959 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-19-5960     TCGA-26-1439     TCGA-26-1442     TCGA-26-5132 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-26-5133     TCGA-26-5134     TCGA-26-5135     TCGA-26-5136 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-26-5139     TCGA-26-6173     TCGA-26-6174     TCGA-27-1830 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1836     TCGA-27-1837     TCGA-27-1838 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-27-2518     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2527     TCGA-27-2528 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2502     TCGA-28-2509 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-28-2510     TCGA-28-2513     TCGA-28-2514     TCGA-28-5204 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5211 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"DLX6 WILD-TYPE" "DLX6 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DLX6 MUTATED        2      2      1
  DLX6 WILD-TYPE    290    430     61
D127V5, multiclass
        clus
vv       DLX6 MUTATED DLX6 WILD-TYPE
  CLUS_1            2            290
  CLUS_2            2            430
  CLUS_3            1             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLX6 MUTATED        1      1      1      1
  DLX6 WILD-TYPE    152    222     87    160
D127V6, multiclass
        clus
vv       DLX6 MUTATED DLX6 WILD-TYPE
  CLUS_1            1            152
  CLUS_2            1            222
  CLUS_3            1             87
  CLUS_4            1            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLX6 MUTATED        2      2      0      1
  DLX6 WILD-TYPE    183    153    138     94
D127V7, multiclass
        clus
vv       DLX6 MUTATED DLX6 WILD-TYPE
  CLUS_1            2            183
  CLUS_2            2            153
  CLUS_3            0            138
  CLUS_4            1             94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DLX6 MUTATED        2      2      1
  DLX6 WILD-TYPE    203    218    147
D127V8, multiclass
        clus
vv       DLX6 MUTATED DLX6 WILD-TYPE
  CLUS_1            2            203
  CLUS_2            2            218
  CLUS_3            1            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DLX6 MUTATED        2      2      0
  DLX6 WILD-TYPE    236    189    228
D127V9, multiclass
        clus
vv       DLX6 MUTATED DLX6 WILD-TYPE
  CLUS_1            2            236
  CLUS_2            2            189
  CLUS_3            0            228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DLX6 MUTATED        1      1      2
  DLX6 WILD-TYPE    195    190    268
D127V10, multiclass
        clus
vv       DLX6 MUTATED DLX6 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            1            190
  CLUS_3            2            268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLX6 MUTATED        0      1      0      3
  DLX6 WILD-TYPE    140    106     83    179
D127V11, multiclass
        clus
vv       DLX6 MUTATED DLX6 WILD-TYPE
  CLUS_1            0            140
  CLUS_2            1            106
  CLUS_3            0             83
  CLUS_4            3            179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DLX6 MUTATED        0      2      2
  DLX6 WILD-TYPE    223    184    101
D127V12, multiclass
        clus
vv       DLX6 MUTATED DLX6 WILD-TYPE
  CLUS_1            0            223
  CLUS_2            2            184
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLX6 MUTATED        0      0      0      4
  DLX6 WILD-TYPE    127    119    106    152
D127V13, multiclass
        clus
vv       DLX6 MUTATED DLX6 WILD-TYPE
  CLUS_1            0            127
  CLUS_2            0            119
  CLUS_3            0            106
  CLUS_4            4            152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DLX6 MUTATED        0      0      2      0      0      2
  DLX6 WILD-TYPE     99     77    118     57     63     90
D127V14, multiclass
        clus
vv       DLX6 MUTATED DLX6 WILD-TYPE
  CLUS_1            0             99
  CLUS_2            0             77
  CLUS_3            2            118
  CLUS_4            0             57
  CLUS_5            0             63
  CLUS_6            2             90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(128) Variable = MAP3K1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP3K1 MUTATED        1      1      2      1
  MAP3K1 WILD-TYPE     77     40     62     56
D128V1, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              1               77
  CLUS_2              1               40
  CLUS_3              2               62
  CLUS_4              1               56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP3K1 MUTATED        1      1      2      1
  MAP3K1 WILD-TYPE     62     49     46     78
D128V2, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              1               62
  CLUS_2              1               49
  CLUS_3              2               46
  CLUS_4              1               78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP3K1 MUTATED        1      3      0      2
  MAP3K1 WILD-TYPE     69     95     44     61
D128V3, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              1               69
  CLUS_2              3               95
  CLUS_3              0               44
  CLUS_4              2               61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP3K1 MUTATED        2      2      2
  MAP3K1 WILD-TYPE    136     59     74
D128V4, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              2              136
  CLUS_2              2               59
  CLUS_3              2               74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP3K1 MUTATED        7      2      0
  MAP3K1 WILD-TYPE    285    430     62
D128V5, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              7              285
  CLUS_2              2              430
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP3K1 MUTATED        2      2      0      0
  MAP3K1 WILD-TYPE    151    221     88    161
D128V6, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              2              151
  CLUS_2              2              221
  CLUS_3              0               88
  CLUS_4              0              161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP3K1 MUTATED        1      0      3      1
  MAP3K1 WILD-TYPE    184    155    135     94
D128V7, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              1              184
  CLUS_2              0              155
  CLUS_3              3              135
  CLUS_4              1               94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP3K1 MUTATED        2      3      0
  MAP3K1 WILD-TYPE    203    217    148
D128V8, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              2              203
  CLUS_2              3              217
  CLUS_3              0              148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP3K1 MUTATED        6      1      0
  MAP3K1 WILD-TYPE    232    190    228
D128V9, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              6              232
  CLUS_2              1              190
  CLUS_3              0              228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP3K1 MUTATED        4      2      1
  MAP3K1 WILD-TYPE    192    189    269
D128V10, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              4              192
  CLUS_2              2              189
  CLUS_3              1              269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP3K1 MUTATED        0      2      0      1
  MAP3K1 WILD-TYPE    140    105     83    181
D128V11, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              0              140
  CLUS_2              2              105
  CLUS_3              0               83
  CLUS_4              1              181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP3K1 MUTATED        0      1      2
  MAP3K1 WILD-TYPE    223    185    101
D128V12, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              0              223
  CLUS_2              1              185
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP3K1 MUTATED        0      1      0      2
  MAP3K1 WILD-TYPE    127    118    106    154
D128V13, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              0              127
  CLUS_2              1              118
  CLUS_3              0              106
  CLUS_4              2              154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  MAP3K1 MUTATED        0      1      0      0      0      2
  MAP3K1 WILD-TYPE     99     76    120     57     63     90
D128V14, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              0               99
  CLUS_2              1               76
  CLUS_3              0              120
  CLUS_4              0               57
  CLUS_5              0               63
  CLUS_6              2               90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(129) Variable = ROBO3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ROBO3 MUTATED        0      0      0      0
  ROBO3 WILD-TYPE     78     41     64     57
D129V1, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ROBO3 MUTATED        0      0      0      0
  ROBO3 WILD-TYPE     63     50     48     79
D129V2, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ROBO3 MUTATED        0      0      0      0
  ROBO3 WILD-TYPE     70     98     44     63
D129V3, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ROBO3 MUTATED        0      0      0
  ROBO3 WILD-TYPE    138     61     76
D129V4, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ROBO3 MUTATED        0      5      0
  ROBO3 WILD-TYPE    292    427     62
D129V5, multiclass
        clus
vv       ROBO3 MUTATED ROBO3 WILD-TYPE
  CLUS_1             0             292
  CLUS_2             5             427
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ROBO3 MUTATED        0      3      0      2
  ROBO3 WILD-TYPE    153    220     88    159
D129V6, multiclass
        clus
vv       ROBO3 MUTATED ROBO3 WILD-TYPE
  CLUS_1             0             153
  CLUS_2             3             220
  CLUS_3             0              88
  CLUS_4             2             159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ROBO3 MUTATED        3      0      0      1
  ROBO3 WILD-TYPE    182    155    138     94
D129V7, multiclass
        clus
vv       ROBO3 MUTATED ROBO3 WILD-TYPE
  CLUS_1             3             182
  CLUS_2             0             155
  CLUS_3             0             138
  CLUS_4             1              94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ROBO3 MUTATED        1      3      0
  ROBO3 WILD-TYPE    204    217    148
D129V8, multiclass
        clus
vv       ROBO3 MUTATED ROBO3 WILD-TYPE
  CLUS_1             1             204
  CLUS_2             3             217
  CLUS_3             0             148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ROBO3 MUTATED        0      2      3
  ROBO3 WILD-TYPE    238    189    225
D129V9, multiclass
        clus
vv       ROBO3 MUTATED ROBO3 WILD-TYPE
  CLUS_1             0             238
  CLUS_2             2             189
  CLUS_3             3             225
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ROBO3 MUTATED        0      2      3
  ROBO3 WILD-TYPE    196    189    267
D129V10, multiclass
        clus
vv       ROBO3 MUTATED ROBO3 WILD-TYPE
  CLUS_1             0             196
  CLUS_2             2             189
  CLUS_3             3             267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ROBO3 MUTATED        1      1      1      2
  ROBO3 WILD-TYPE    139    106     82    180
D129V11, multiclass
        clus
vv       ROBO3 MUTATED ROBO3 WILD-TYPE
  CLUS_1             1             139
  CLUS_2             1             106
  CLUS_3             1              82
  CLUS_4             2             180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ROBO3 MUTATED        4      1      0
  ROBO3 WILD-TYPE    219    185    103
D129V12, multiclass
        clus
vv       ROBO3 MUTATED ROBO3 WILD-TYPE
  CLUS_1             4             219
  CLUS_2             1             185
  CLUS_3             0             103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ROBO3 MUTATED        2      1      1      1
  ROBO3 WILD-TYPE    125    118    105    155
D129V13, multiclass
        clus
vv       ROBO3 MUTATED ROBO3 WILD-TYPE
  CLUS_1             2             125
  CLUS_2             1             118
  CLUS_3             1             105
  CLUS_4             1             155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  ROBO3 MUTATED        1      1      1      1      0      1
  ROBO3 WILD-TYPE     98     76    119     56     63     91
D129V14, multiclass
        clus
vv       ROBO3 MUTATED ROBO3 WILD-TYPE
  CLUS_1             1              98
  CLUS_2             1              76
  CLUS_3             1             119
  CLUS_4             1              56
  CLUS_5             0              63
  CLUS_6             1              91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(130) Variable = SGOL2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SGOL2 MUTATED        2      0      0      1
  SGOL2 WILD-TYPE     76     41     64     56
D130V1, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             2              76
  CLUS_2             0              41
  CLUS_3             0              64
  CLUS_4             1              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SGOL2 MUTATED        1      0      0      2
  SGOL2 WILD-TYPE     62     50     48     77
D130V2, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             1              62
  CLUS_2             0              50
  CLUS_3             0              48
  CLUS_4             2              77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SGOL2 MUTATED        1      0      1      1
  SGOL2 WILD-TYPE     69     98     43     62
D130V3, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             1              69
  CLUS_2             0              98
  CLUS_3             1              43
  CLUS_4             1              62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SGOL2 MUTATED        2      1      0
  SGOL2 WILD-TYPE    136     60     76
D130V4, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             2             136
  CLUS_2             1              60
  CLUS_3             0              76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SGOL2 MUTATED        3      5      0
  SGOL2 WILD-TYPE    289    427     62
D130V5, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             3             289
  CLUS_2             5             427
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SGOL2 MUTATED        1      3      1      1
  SGOL2 WILD-TYPE    152    220     87    160
D130V6, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             1             152
  CLUS_2             3             220
  CLUS_3             1              87
  CLUS_4             1             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SGOL2 MUTATED        4      0      0      0
  SGOL2 WILD-TYPE    181    155    138     95
D130V7, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             4             181
  CLUS_2             0             155
  CLUS_3             0             138
  CLUS_4             0              95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SGOL2 MUTATED        1      3      0
  SGOL2 WILD-TYPE    204    217    148
D130V8, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             1             204
  CLUS_2             3             217
  CLUS_3             0             148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SGOL2 MUTATED        3      1      4
  SGOL2 WILD-TYPE    235    190    224
D130V9, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             3             235
  CLUS_2             1             190
  CLUS_3             4             224
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SGOL2 MUTATED        2      4      2
  SGOL2 WILD-TYPE    194    187    268
D130V10, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             2             194
  CLUS_2             4             187
  CLUS_3             2             268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SGOL2 MUTATED        2      1      1      1
  SGOL2 WILD-TYPE    138    106     82    181
D130V11, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             2             138
  CLUS_2             1             106
  CLUS_3             1              82
  CLUS_4             1             181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SGOL2 MUTATED        3      1      1
  SGOL2 WILD-TYPE    220    185    102
D130V12, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             3             220
  CLUS_2             1             185
  CLUS_3             1             102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SGOL2 MUTATED        2      0      1      2
  SGOL2 WILD-TYPE    125    119    105    154
D130V13, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             2             125
  CLUS_2             0             119
  CLUS_3             1             105
  CLUS_4             2             154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  SGOL2 MUTATED        2      0      1      1      0      1
  SGOL2 WILD-TYPE     97     77    119     56     63     91
D130V14, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             2              97
  CLUS_2             0              77
  CLUS_3             1             119
  CLUS_4             1              56
  CLUS_5             0              63
  CLUS_6             1              91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(131) Variable = HTT MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTT MUTATED        0      0      0      0
  HTT WILD-TYPE     78     41     64     57
D131V1, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTT MUTATED        0      0      0      0
  HTT WILD-TYPE     63     50     48     79
D131V2, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTT MUTATED        0      0      0      0
  HTT WILD-TYPE     70     98     44     63
D131V3, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  HTT MUTATED        0      0      0
  HTT WILD-TYPE    138     61     76
D131V4, multiclass
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  HTT MUTATED        1      4      0
  HTT WILD-TYPE    291    428     62
D131V5, multiclass
        clus
vv       HTT MUTATED HTT WILD-TYPE
  CLUS_1           1           291
  CLUS_2           4           428
  CLUS_3           0            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTT MUTATED        1      0      0      4
  HTT WILD-TYPE    152    223     88    157
D131V6, multiclass
        clus
vv       HTT MUTATED HTT WILD-TYPE
  CLUS_1           1           152
  CLUS_2           0           223
  CLUS_3           0            88
  CLUS_4           4           157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTT MUTATED        2      2      1      0
  HTT WILD-TYPE    183    153    137     95
D131V7, multiclass
        clus
vv       HTT MUTATED HTT WILD-TYPE
  CLUS_1           2           183
  CLUS_2           2           153
  CLUS_3           1           137
  CLUS_4           0            95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  HTT MUTATED        1      2      2
  HTT WILD-TYPE    204    218    146
D131V8, multiclass
        clus
vv       HTT MUTATED HTT WILD-TYPE
  CLUS_1           1           204
  CLUS_2           2           218
  CLUS_3           2           146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  HTT MUTATED        2      3      0
  HTT WILD-TYPE    236    188    228
D131V9, multiclass
        clus
vv       HTT MUTATED HTT WILD-TYPE
  CLUS_1           2           236
  CLUS_2           3           188
  CLUS_3           0           228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  HTT MUTATED        0      2      3
  HTT WILD-TYPE    196    189    267
D131V10, multiclass
        clus
vv       HTT MUTATED HTT WILD-TYPE
  CLUS_1           0           196
  CLUS_2           2           189
  CLUS_3           3           267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTT MUTATED        0      2      0      3
  HTT WILD-TYPE    140    105     83    179
D131V11, multiclass
        clus
vv       HTT MUTATED HTT WILD-TYPE
  CLUS_1           0           140
  CLUS_2           2           105
  CLUS_3           0            83
  CLUS_4           3           179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  HTT MUTATED        0      2      3
  HTT WILD-TYPE    223    184    100
D131V12, multiclass
        clus
vv       HTT MUTATED HTT WILD-TYPE
  CLUS_1           0           223
  CLUS_2           2           184
  CLUS_3           3           100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTT MUTATED        0      1      1      3
  HTT WILD-TYPE    127    118    105    153
D131V13, multiclass
        clus
vv       HTT MUTATED HTT WILD-TYPE
  CLUS_1           0           127
  CLUS_2           1           118
  CLUS_3           1           105
  CLUS_4           3           153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  HTT MUTATED        0      2      2      0      0      1
  HTT WILD-TYPE     99     75    118     57     63     91
D131V14, multiclass
        clus
vv       HTT MUTATED HTT WILD-TYPE
  CLUS_1           0            99
  CLUS_2           2            75
  CLUS_3           2           118
  CLUS_4           0            57
  CLUS_5           0            63
  CLUS_6           1            91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(132) Variable = SON MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SON MUTATED        1      0      0      0
  SON WILD-TYPE     77     41     64     57
D132V1, multiclass
[1] "Remove cluster labels:" "SON MUTATED"           
clus
  SON MUTATED SON WILD-TYPE 
            1           239 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-2470    TCGA-02-2483 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124    TCGA-06-0126 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0132    TCGA-06-0137 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157    TCGA-06-0158 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0166    TCGA-06-0167    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-2557    TCGA-06-2558 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5859    TCGA-06-6389    TCGA-06-6390    TCGA-06-6391    TCGA-08-0386 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-0616    TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-0821    TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-3653    TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0781 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-0817    TCGA-14-0871    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-1829    TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-15-1444    TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-1390    TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-2624    TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-5947    TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5954 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-26-5136    TCGA-26-5139    TCGA-27-1830    TCGA-27-1831    TCGA-27-1832 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-1833    TCGA-27-1834    TCGA-27-1835    TCGA-27-1836    TCGA-27-1837 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-1838    TCGA-27-2518    TCGA-27-2519    TCGA-27-2521    TCGA-27-2523 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-2524    TCGA-27-2526    TCGA-27-2527    TCGA-27-2528    TCGA-28-1747 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-1753    TCGA-28-2501    TCGA-28-2502    TCGA-28-2509    TCGA-28-2510 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-2513    TCGA-28-2514    TCGA-28-5204    TCGA-28-5207    TCGA-28-5208 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-5209    TCGA-28-5213    TCGA-28-5214    TCGA-28-5215    TCGA-28-5216 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-5218    TCGA-28-5219    TCGA-28-5220    TCGA-28-6450    TCGA-32-1970 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-1977    TCGA-32-1979    TCGA-32-1980    TCGA-32-1982    TCGA-32-1986 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-1991    TCGA-32-2491    TCGA-32-2494    TCGA-32-2495    TCGA-32-2615 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-2632    TCGA-32-2634    TCGA-32-2638    TCGA-32-4208    TCGA-32-4209 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-4210    TCGA-32-4211    TCGA-32-4719    TCGA-32-5222    TCGA-41-2571 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-41-2572    TCGA-41-2573    TCGA-41-2575    TCGA-41-3392    TCGA-41-3393 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-41-3915    TCGA-41-4097    TCGA-41-5651    TCGA-76-4925    TCGA-76-4926 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-4927    TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-4934    TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6285    TCGA-81-5910    TCGA-87-5896 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SON MUTATED        0      0      0      1
  SON WILD-TYPE     63     50     48     78
D132V2, multiclass
[1] "Remove cluster labels:" "SON MUTATED"           
clus
  SON MUTATED SON WILD-TYPE 
            1           239 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-2470    TCGA-02-2483 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124    TCGA-06-0126 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0132    TCGA-06-0137 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157    TCGA-06-0158 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0166    TCGA-06-0167    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-2557    TCGA-06-2558 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5859    TCGA-06-6389    TCGA-06-6390    TCGA-06-6391    TCGA-08-0386 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-0616    TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-0821    TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-3653    TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0781 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-0817    TCGA-14-0871    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-1829    TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-15-1444    TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-1390    TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-2624    TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-5947    TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5954 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-26-5136    TCGA-26-5139    TCGA-27-1830    TCGA-27-1831    TCGA-27-1832 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-1833    TCGA-27-1834    TCGA-27-1835    TCGA-27-1836    TCGA-27-1837 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-1838    TCGA-27-2518    TCGA-27-2519    TCGA-27-2521    TCGA-27-2523 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-2524    TCGA-27-2526    TCGA-27-2527    TCGA-27-2528    TCGA-28-1747 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-1753    TCGA-28-2501    TCGA-28-2502    TCGA-28-2509    TCGA-28-2510 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-2513    TCGA-28-2514    TCGA-28-5204    TCGA-28-5207    TCGA-28-5208 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-5209    TCGA-28-5213    TCGA-28-5214    TCGA-28-5215    TCGA-28-5216 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-5218    TCGA-28-5219    TCGA-28-5220    TCGA-28-6450    TCGA-32-1970 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-1977    TCGA-32-1979    TCGA-32-1980    TCGA-32-1982    TCGA-32-1986 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-1991    TCGA-32-2491    TCGA-32-2494    TCGA-32-2495    TCGA-32-2615 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-2632    TCGA-32-2634    TCGA-32-2638    TCGA-32-4208    TCGA-32-4209 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-4210    TCGA-32-4211    TCGA-32-4719    TCGA-32-5222    TCGA-41-2571 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-41-2572    TCGA-41-2573    TCGA-41-2575    TCGA-41-3392    TCGA-41-3393 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-41-3915    TCGA-41-4097    TCGA-41-5651    TCGA-76-4925    TCGA-76-4926 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-4927    TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-4934    TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6285    TCGA-81-5910    TCGA-87-5896 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SON MUTATED        1      0      0      0
  SON WILD-TYPE     69     98     44     63
D132V3, multiclass
[1] "Remove cluster labels:" "SON MUTATED"           
clus
  SON MUTATED SON WILD-TYPE 
            1           274 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-0055    TCGA-02-2470 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-02-2483    TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0126    TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0137 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0151    TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0158    TCGA-06-0166    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-1806    TCGA-06-2557 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-2558    TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-2564    TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5408    TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5414    TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5858    TCGA-06-5859    TCGA-06-6388    TCGA-06-6389    TCGA-06-6390 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-6391    TCGA-06-6693    TCGA-06-6694    TCGA-06-6695    TCGA-06-6697 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-6698    TCGA-06-6699    TCGA-06-6700    TCGA-06-6701    TCGA-08-0386 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-0616    TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-0821    TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-3653    TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0740 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-0781    TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-0813    TCGA-14-0817    TCGA-14-0862    TCGA-14-0871    TCGA-14-1043 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-1395    TCGA-14-1450    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-1829    TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-15-1444    TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-1390    TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-2624    TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-5947    TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5953 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-5954    TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-26-1439    TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-26-5135    TCGA-26-5136    TCGA-26-5139    TCGA-26-6173    TCGA-26-6174 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-1830    TCGA-27-1831    TCGA-27-1832    TCGA-27-1833    TCGA-27-1834 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-1835    TCGA-27-1836    TCGA-27-1837    TCGA-27-1838    TCGA-27-2518 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-2519    TCGA-27-2521    TCGA-27-2523    TCGA-27-2524    TCGA-27-2526 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-2527    TCGA-27-2528    TCGA-28-1747    TCGA-28-1753    TCGA-28-2502 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-2509    TCGA-28-2510    TCGA-28-2513    TCGA-28-2514    TCGA-28-5204 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-5207    TCGA-28-5208    TCGA-28-5209    TCGA-28-5211    TCGA-28-5213 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-5214    TCGA-28-5215    TCGA-28-5216    TCGA-28-5218    TCGA-28-5219 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-5220    TCGA-28-6450    TCGA-32-1970    TCGA-32-1977    TCGA-32-1979 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-1980    TCGA-32-1982    TCGA-32-1986    TCGA-32-1991    TCGA-32-2491 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-2494    TCGA-32-2495    TCGA-32-2615    TCGA-32-2632    TCGA-32-2634 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-2638    TCGA-32-4208    TCGA-32-4209    TCGA-32-4210    TCGA-32-4211 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-4719    TCGA-32-5222    TCGA-41-2571    TCGA-41-2572    TCGA-41-2573 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-41-2575    TCGA-41-3392    TCGA-41-3393    TCGA-41-3915    TCGA-41-4097 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-41-5651    TCGA-41-6646    TCGA-74-6573    TCGA-74-6575    TCGA-74-6577 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-74-6578    TCGA-74-6584    TCGA-76-4925    TCGA-76-4926    TCGA-76-4927 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932    TCGA-76-4934 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193    TCGA-76-6280 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6283    TCGA-76-6285    TCGA-76-6286    TCGA-76-6656 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-6657    TCGA-76-6660    TCGA-76-6661    TCGA-76-6662    TCGA-76-6663 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-6664    TCGA-81-5910    TCGA-81-5911    TCGA-87-5896 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SON MUTATED        0      0      1
  SON WILD-TYPE    138     61     75
D132V4, multiclass
[1] "Remove cluster labels:" "SON MUTATED"           
clus
  SON MUTATED SON WILD-TYPE 
            1           274 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-0055    TCGA-02-2470 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-02-2483    TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0126    TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0137 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0151    TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0158    TCGA-06-0166    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-1806    TCGA-06-2557 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-2558    TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-2564    TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5408    TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5414    TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-5858    TCGA-06-5859    TCGA-06-6388    TCGA-06-6389    TCGA-06-6390 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-6391    TCGA-06-6693    TCGA-06-6694    TCGA-06-6695    TCGA-06-6697 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-06-6698    TCGA-06-6699    TCGA-06-6700    TCGA-06-6701    TCGA-08-0386 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-0616    TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-0821    TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-12-3653    TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0740 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-0781    TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-0813    TCGA-14-0817    TCGA-14-0862    TCGA-14-0871    TCGA-14-1043 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-1395    TCGA-14-1450    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-14-1829    TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-15-1444    TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-1390    TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-2624    TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-5947    TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5953 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-19-5954    TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-26-1439    TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-26-5135    TCGA-26-5136    TCGA-26-5139    TCGA-26-6173    TCGA-26-6174 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-1830    TCGA-27-1831    TCGA-27-1832    TCGA-27-1833    TCGA-27-1834 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-1835    TCGA-27-1836    TCGA-27-1837    TCGA-27-1838    TCGA-27-2518 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-2519    TCGA-27-2521    TCGA-27-2523    TCGA-27-2524    TCGA-27-2526 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-27-2527    TCGA-27-2528    TCGA-28-1747    TCGA-28-1753    TCGA-28-2502 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-2509    TCGA-28-2510    TCGA-28-2513    TCGA-28-2514    TCGA-28-5204 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-5207    TCGA-28-5208    TCGA-28-5209    TCGA-28-5211    TCGA-28-5213 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-5214    TCGA-28-5215    TCGA-28-5216    TCGA-28-5218    TCGA-28-5219 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-28-5220    TCGA-28-6450    TCGA-32-1970    TCGA-32-1977    TCGA-32-1979 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-1980    TCGA-32-1982    TCGA-32-1986    TCGA-32-1991    TCGA-32-2491 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-2494    TCGA-32-2495    TCGA-32-2615    TCGA-32-2632    TCGA-32-2634 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-2638    TCGA-32-4208    TCGA-32-4209    TCGA-32-4210    TCGA-32-4211 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-32-4719    TCGA-32-5222    TCGA-41-2571    TCGA-41-2572    TCGA-41-2573 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-41-2575    TCGA-41-3392    TCGA-41-3393    TCGA-41-3915    TCGA-41-4097 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-41-5651    TCGA-41-6646    TCGA-74-6573    TCGA-74-6575    TCGA-74-6577 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-74-6578    TCGA-74-6584    TCGA-76-4925    TCGA-76-4926    TCGA-76-4927 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932    TCGA-76-4934 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193    TCGA-76-6280 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6283    TCGA-76-6285    TCGA-76-6286    TCGA-76-6656 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-6657    TCGA-76-6660    TCGA-76-6661    TCGA-76-6662    TCGA-76-6663 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
   TCGA-76-6664    TCGA-81-5910    TCGA-81-5911    TCGA-87-5896 
"SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" "SON WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SON MUTATED        3      6      0
  SON WILD-TYPE    289    426     62
D132V5, multiclass
        clus
vv       SON MUTATED SON WILD-TYPE
  CLUS_1           3           289
  CLUS_2           6           426
  CLUS_3           0            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SON MUTATED        3      2      1      2
  SON WILD-TYPE    150    221     87    159
D132V6, multiclass
        clus
vv       SON MUTATED SON WILD-TYPE
  CLUS_1           3           150
  CLUS_2           2           221
  CLUS_3           1            87
  CLUS_4           2           159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SON MUTATED        4      2      0      1
  SON WILD-TYPE    181    153    138     94
D132V7, multiclass
        clus
vv       SON MUTATED SON WILD-TYPE
  CLUS_1           4           181
  CLUS_2           2           153
  CLUS_3           0           138
  CLUS_4           1            94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SON MUTATED        4      1      2
  SON WILD-TYPE    201    219    146
D132V8, multiclass
        clus
vv       SON MUTATED SON WILD-TYPE
  CLUS_1           4           201
  CLUS_2           1           219
  CLUS_3           2           146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SON MUTATED        4      1      4
  SON WILD-TYPE    234    190    224
D132V9, multiclass
        clus
vv       SON MUTATED SON WILD-TYPE
  CLUS_1           4           234
  CLUS_2           1           190
  CLUS_3           4           224
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SON MUTATED        3      3      3
  SON WILD-TYPE    193    188    267
D132V10, multiclass
        clus
vv       SON MUTATED SON WILD-TYPE
  CLUS_1           3           193
  CLUS_2           3           188
  CLUS_3           3           267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SON MUTATED        2      2      2      2
  SON WILD-TYPE    138    105     81    180
D132V11, multiclass
        clus
vv       SON MUTATED SON WILD-TYPE
  CLUS_1           2           138
  CLUS_2           2           105
  CLUS_3           2            81
  CLUS_4           2           180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SON MUTATED        3      2      3
  SON WILD-TYPE    220    184    100
D132V12, multiclass
        clus
vv       SON MUTATED SON WILD-TYPE
  CLUS_1           3           220
  CLUS_2           2           184
  CLUS_3           3           100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SON MUTATED        0      1      3      3
  SON WILD-TYPE    127    118    103    153
D132V13, multiclass
        clus
vv       SON MUTATED SON WILD-TYPE
  CLUS_1           0           127
  CLUS_2           1           118
  CLUS_3           3           103
  CLUS_4           3           153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  SON MUTATED        1      0      0      0      3      3
  SON WILD-TYPE     98     77    120     57     60     89
D132V14, multiclass
        clus
vv       SON MUTATED SON WILD-TYPE
  CLUS_1           1            98
  CLUS_2           0            77
  CLUS_3           0           120
  CLUS_4           0            57
  CLUS_5           3            60
  CLUS_6           3            89
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(133) Variable = PLXNA3 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLXNA3 MUTATED        1      0      0      0
  PLXNA3 WILD-TYPE     77     41     64     57
D133V1, multiclass
[1] "Remove cluster labels:" "PLXNA3 MUTATED"        
clus
  PLXNA3 MUTATED PLXNA3 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5413       TCGA-06-5414 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLXNA3 MUTATED        1      0      0      0
  PLXNA3 WILD-TYPE     62     50     48     79
D133V2, multiclass
[1] "Remove cluster labels:" "PLXNA3 MUTATED"        
clus
  PLXNA3 MUTATED PLXNA3 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5413       TCGA-06-5414 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLXNA3 MUTATED        0      0      0      1
  PLXNA3 WILD-TYPE     70     98     44     62
D133V3, multiclass
[1] "Remove cluster labels:" "PLXNA3 MUTATED"        
clus
  PLXNA3 MUTATED PLXNA3 WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5413 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLXNA3 MUTATED        0      1      0
  PLXNA3 WILD-TYPE    138     60     76
D133V4, multiclass
[1] "Remove cluster labels:" "PLXNA3 MUTATED"        
clus
  PLXNA3 MUTATED PLXNA3 WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5413 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"PLXNA3 WILD-TYPE" "PLXNA3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLXNA3 MUTATED        2      6      2
  PLXNA3 WILD-TYPE    290    426     60
D133V5, multiclass
        clus
vv       PLXNA3 MUTATED PLXNA3 WILD-TYPE
  CLUS_1              2              290
  CLUS_2              6              426
  CLUS_3              2               60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLXNA3 MUTATED        2      2      2      4
  PLXNA3 WILD-TYPE    151    221     86    157
D133V6, multiclass
        clus
vv       PLXNA3 MUTATED PLXNA3 WILD-TYPE
  CLUS_1              2              151
  CLUS_2              2              221
  CLUS_3              2               86
  CLUS_4              4              157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLXNA3 MUTATED        7      0      1      2
  PLXNA3 WILD-TYPE    178    155    137     93
D133V7, multiclass
        clus
vv       PLXNA3 MUTATED PLXNA3 WILD-TYPE
  CLUS_1              7              178
  CLUS_2              0              155
  CLUS_3              1              137
  CLUS_4              2               93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLXNA3 MUTATED        5      4      1
  PLXNA3 WILD-TYPE    200    216    147
D133V8, multiclass
        clus
vv       PLXNA3 MUTATED PLXNA3 WILD-TYPE
  CLUS_1              5              200
  CLUS_2              4              216
  CLUS_3              1              147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLXNA3 MUTATED        4      1      5
  PLXNA3 WILD-TYPE    234    190    223
D133V9, multiclass
        clus
vv       PLXNA3 MUTATED PLXNA3 WILD-TYPE
  CLUS_1              4              234
  CLUS_2              1              190
  CLUS_3              5              223
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLXNA3 MUTATED        3      4      3
  PLXNA3 WILD-TYPE    193    187    267
D133V10, multiclass
        clus
vv       PLXNA3 MUTATED PLXNA3 WILD-TYPE
  CLUS_1              3              193
  CLUS_2              4              187
  CLUS_3              3              267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLXNA3 MUTATED        3      3      2      1
  PLXNA3 WILD-TYPE    137    104     81    181
D133V11, multiclass
        clus
vv       PLXNA3 MUTATED PLXNA3 WILD-TYPE
  CLUS_1              3              137
  CLUS_2              3              104
  CLUS_3              2               81
  CLUS_4              1              181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLXNA3 MUTATED        5      1      3
  PLXNA3 WILD-TYPE    218    185    100
D133V12, multiclass
        clus
vv       PLXNA3 MUTATED PLXNA3 WILD-TYPE
  CLUS_1              5              218
  CLUS_2              1              185
  CLUS_3              3              100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLXNA3 MUTATED        3      3      2      1
  PLXNA3 WILD-TYPE    124    116    104    155
D133V13, multiclass
        clus
vv       PLXNA3 MUTATED PLXNA3 WILD-TYPE
  CLUS_1              3              124
  CLUS_2              3              116
  CLUS_3              2              104
  CLUS_4              1              155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  PLXNA3 MUTATED        1      2      0      1      2      3
  PLXNA3 WILD-TYPE     98     75    120     56     61     89
D133V14, multiclass
        clus
vv       PLXNA3 MUTATED PLXNA3 WILD-TYPE
  CLUS_1              1               98
  CLUS_2              2               75
  CLUS_3              0              120
  CLUS_4              1               56
  CLUS_5              2               61
  CLUS_6              3               89
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(134) Variable = PASD1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PASD1 MUTATED        1      0      1      0
  PASD1 WILD-TYPE     77     41     63     57
D134V1, multiclass
[1] "Remove cluster labels:" "PASD1 MUTATED"         
clus
  PASD1 MUTATED PASD1 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2629      TCGA-19-2631      TCGA-19-4068 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3915 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PASD1 MUTATED        0      0      1      1
  PASD1 WILD-TYPE     63     50     47     78
D134V2, multiclass
[1] "Remove cluster labels:" "PASD1 MUTATED"         
clus
  PASD1 MUTATED PASD1 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2629      TCGA-19-2631      TCGA-19-4068 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3915 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"PASD1 WILD-TYPE" "PASD1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PASD1 MUTATED        3      1      0      0
  PASD1 WILD-TYPE     67     97     44     63
D134V3, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             3              67
  CLUS_2             1              97
  CLUS_3             0              44
  CLUS_4             0              63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PASD1 MUTATED        0      0      4
  PASD1 WILD-TYPE    138     61     72
D134V4, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             0             138
  CLUS_2             0              61
  CLUS_3             4              72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PASD1 MUTATED        4      4      0
  PASD1 WILD-TYPE    288    428     62
D134V5, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             4             288
  CLUS_2             4             428
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PASD1 MUTATED        2      1      2      2
  PASD1 WILD-TYPE    151    222     86    159
D134V6, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             2             151
  CLUS_2             1             222
  CLUS_3             2              86
  CLUS_4             2             159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PASD1 MUTATED        2      2      2      1
  PASD1 WILD-TYPE    183    153    136     94
D134V7, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             2             183
  CLUS_2             2             153
  CLUS_3             2             136
  CLUS_4             1              94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PASD1 MUTATED        3      2      2
  PASD1 WILD-TYPE    202    218    146
D134V8, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             3             202
  CLUS_2             2             218
  CLUS_3             2             146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PASD1 MUTATED        0      2      2
  PASD1 WILD-TYPE    238    189    226
D134V9, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             0             238
  CLUS_2             2             189
  CLUS_3             2             226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PASD1 MUTATED        0      1      3
  PASD1 WILD-TYPE    196    190    267
D134V10, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             0             196
  CLUS_2             1             190
  CLUS_3             3             267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PASD1 MUTATED        1      1      1      1
  PASD1 WILD-TYPE    139    106     82    181
D134V11, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             1             139
  CLUS_2             1             106
  CLUS_3             1              82
  CLUS_4             1             181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PASD1 MUTATED        1      3      0
  PASD1 WILD-TYPE    222    183    103
D134V12, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             1             222
  CLUS_2             3             183
  CLUS_3             0             103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PASD1 MUTATED        0      1      0      3
  PASD1 WILD-TYPE    127    118    106    153
D134V13, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             0             127
  CLUS_2             1             118
  CLUS_3             0             106
  CLUS_4             3             153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  PASD1 MUTATED        0      2      1      0      0      1
  PASD1 WILD-TYPE     99     75    119     57     63     91
D134V14, multiclass
        clus
vv       PASD1 MUTATED PASD1 WILD-TYPE
  CLUS_1             0              99
  CLUS_2             2              75
  CLUS_3             1             119
  CLUS_4             0              57
  CLUS_5             0              63
  CLUS_6             1              91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(135) Variable = AMPD1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMPD1 MUTATED        1      1      1      0
  AMPD1 WILD-TYPE     77     40     63     57
D135V1, multiclass
        clus
vv       AMPD1 MUTATED AMPD1 WILD-TYPE
  CLUS_1             1              77
  CLUS_2             1              40
  CLUS_3             1              63
  CLUS_4             0              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMPD1 MUTATED        2      0      1      0
  AMPD1 WILD-TYPE     61     50     47     79
D135V2, multiclass
        clus
vv       AMPD1 MUTATED AMPD1 WILD-TYPE
  CLUS_1             2              61
  CLUS_2             0              50
  CLUS_3             1              47
  CLUS_4             0              79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMPD1 MUTATED        2      1      0      0
  AMPD1 WILD-TYPE     68     97     44     63
D135V3, multiclass
        clus
vv       AMPD1 MUTATED AMPD1 WILD-TYPE
  CLUS_1             2              68
  CLUS_2             1              97
  CLUS_3             0              44
  CLUS_4             0              63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AMPD1 MUTATED        1      2      0
  AMPD1 WILD-TYPE    137     59     76
D135V4, multiclass
        clus
vv       AMPD1 MUTATED AMPD1 WILD-TYPE
  CLUS_1             1             137
  CLUS_2             2              59
  CLUS_3             0              76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AMPD1 MUTATED        5      2      0
  AMPD1 WILD-TYPE    287    430     62
D135V5, multiclass
        clus
vv       AMPD1 MUTATED AMPD1 WILD-TYPE
  CLUS_1             5             287
  CLUS_2             2             430
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMPD1 MUTATED        4      2      0      0
  AMPD1 WILD-TYPE    149    221     88    161
D135V6, multiclass
        clus
vv       AMPD1 MUTATED AMPD1 WILD-TYPE
  CLUS_1             4             149
  CLUS_2             2             221
  CLUS_3             0              88
  CLUS_4             0             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMPD1 MUTATED        1      0      2      0
  AMPD1 WILD-TYPE    184    155    136     95
D135V7, multiclass
        clus
vv       AMPD1 MUTATED AMPD1 WILD-TYPE
  CLUS_1             1             184
  CLUS_2             0             155
  CLUS_3             2             136
  CLUS_4             0              95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AMPD1 MUTATED        2      1      0
  AMPD1 WILD-TYPE    203    219    148
D135V8, multiclass
        clus
vv       AMPD1 MUTATED AMPD1 WILD-TYPE
  CLUS_1             2             203
  CLUS_2             1             219
  CLUS_3             0             148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AMPD1 MUTATED        4      2      1
  AMPD1 WILD-TYPE    234    189    227
D135V9, multiclass
        clus
vv       AMPD1 MUTATED AMPD1 WILD-TYPE
  CLUS_1             4             234
  CLUS_2             2             189
  CLUS_3             1             227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AMPD1 MUTATED        3      2      2
  AMPD1 WILD-TYPE    193    189    268
D135V10, multiclass
        clus
vv       AMPD1 MUTATED AMPD1 WILD-TYPE
  CLUS_1             3             193
  CLUS_2             2             189
  CLUS_3             2             268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMPD1 MUTATED        0      2      0      2
  AMPD1 WILD-TYPE    140    105     83    180
D135V11, multiclass
        clus
vv       AMPD1 MUTATED AMPD1 WILD-TYPE
  CLUS_1             0             140
  CLUS_2             2             105
  CLUS_3             0              83
  CLUS_4             2             180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AMPD1 MUTATED        1      1      2
  AMPD1 WILD-TYPE    222    185    101
D135V12, multiclass
        clus
vv       AMPD1 MUTATED AMPD1 WILD-TYPE
  CLUS_1             1             222
  CLUS_2             1             185
  CLUS_3             2             101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMPD1 MUTATED        1      0      0      3
  AMPD1 WILD-TYPE    126    119    106    153
D135V13, multiclass
        clus
vv       AMPD1 MUTATED AMPD1 WILD-TYPE
  CLUS_1             1             126
  CLUS_2             0             119
  CLUS_3             0             106
  CLUS_4             3             153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AMPD1 MUTATED        1      0      2      0      0      1
  AMPD1 WILD-TYPE     98     77    118     57     63     91
D135V14, multiclass
        clus
vv       AMPD1 MUTATED AMPD1 WILD-TYPE
  CLUS_1             1              98
  CLUS_2             0              77
  CLUS_3             2             118
  CLUS_4             0              57
  CLUS_5             0              63
  CLUS_6             1              91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(136) Variable = TNFSF9 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFSF9 MUTATED        1      1      0      0
  TNFSF9 WILD-TYPE     77     40     64     57
D136V1, multiclass
[1] "Remove cluster labels:" "TNFSF9 MUTATED"        
clus
  TNFSF9 MUTATED TNFSF9 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6285 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFSF9 MUTATED        1      0      0      1
  TNFSF9 WILD-TYPE     62     50     48     78
D136V2, multiclass
[1] "Remove cluster labels:" "TNFSF9 MUTATED"        
clus
  TNFSF9 MUTATED TNFSF9 WILD-TYPE 
               2              238 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6285 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFSF9 MUTATED        2      1      0      0
  TNFSF9 WILD-TYPE     68     97     44     63
D136V3, multiclass
        clus
vv       TNFSF9 MUTATED TNFSF9 WILD-TYPE
  CLUS_1              2               68
  CLUS_2              1               97
  CLUS_3              0               44
  CLUS_4              0               63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNFSF9 MUTATED        1      0      2
  TNFSF9 WILD-TYPE    137     61     74
D136V4, multiclass
        clus
vv       TNFSF9 MUTATED TNFSF9 WILD-TYPE
  CLUS_1              1              137
  CLUS_2              0               61
  CLUS_3              2               74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNFSF9 MUTATED        3      2      0
  TNFSF9 WILD-TYPE    289    430     62
D136V5, multiclass
        clus
vv       TNFSF9 MUTATED TNFSF9 WILD-TYPE
  CLUS_1              3              289
  CLUS_2              2              430
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFSF9 MUTATED        3      1      0      1
  TNFSF9 WILD-TYPE    150    222     88    160
D136V6, multiclass
        clus
vv       TNFSF9 MUTATED TNFSF9 WILD-TYPE
  CLUS_1              3              150
  CLUS_2              1              222
  CLUS_3              0               88
  CLUS_4              1              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFSF9 MUTATED        2      0      1      2
  TNFSF9 WILD-TYPE    183    155    137     93
D136V7, multiclass
        clus
vv       TNFSF9 MUTATED TNFSF9 WILD-TYPE
  CLUS_1              2              183
  CLUS_2              0              155
  CLUS_3              1              137
  CLUS_4              2               93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNFSF9 MUTATED        2      3      0
  TNFSF9 WILD-TYPE    203    217    148
D136V8, multiclass
        clus
vv       TNFSF9 MUTATED TNFSF9 WILD-TYPE
  CLUS_1              2              203
  CLUS_2              3              217
  CLUS_3              0              148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNFSF9 MUTATED        0      0      2
  TNFSF9 WILD-TYPE    238    191    226
D136V9, multiclass
[1] "Remove cluster labels:" "TNFSF9 MUTATED"        
clus
  TNFSF9 MUTATED TNFSF9 WILD-TYPE 
               2              655 
      TCGA-02-0047       TCGA-02-0055       TCGA-02-2483       TCGA-02-2485 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-02-2486       TCGA-06-0129       TCGA-06-0130       TCGA-06-0132 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0157       TCGA-06-0158       TCGA-06-0168 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0174       TCGA-06-0178       TCGA-06-0184       TCGA-06-0219 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0238       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0649       TCGA-06-0686       TCGA-06-0743       TCGA-06-0744 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0745       TCGA-06-0747       TCGA-06-0749       TCGA-06-0750 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0878       TCGA-06-0882       TCGA-06-1804       TCGA-06-2557 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-08-0386       TCGA-12-0616 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0821       TCGA-12-1597 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-5299       TCGA-14-0781       TCGA-14-0787       TCGA-14-0789 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0817       TCGA-14-1823       TCGA-14-1825 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-15-0742       TCGA-15-1444 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-1045       TCGA-19-1390       TCGA-19-2619 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1834 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1837       TCGA-27-2519       TCGA-27-2521 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2528 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2499       TCGA-28-2509 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-2510       TCGA-28-2513       TCGA-28-2514       TCGA-28-5204 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5213 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5220 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1980       TCGA-32-1982       TCGA-32-2615 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4213 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-3915 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-76-4932       TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-4943       TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-5394       TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6186       TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6666       TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6670       TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5275       TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5279       TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XA       TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XE       TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64L       TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64R       TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64W       TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A75M       TCGA-DB-A75O       TCGA-DB-A75P       TCGA-DH-5140 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143       TCGA-DH-5144 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D       TCGA-DH-A66F 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US       TCGA-DH-A7UT 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847       TCGA-DU-5849 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853       TCGA-DU-5854 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871       TCGA-DU-5872 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393       TCGA-DU-6394 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7011       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7014 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TI       TCGA-DU-A7TJ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74J       TCGA-HT-A74K 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7493 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CW       TCGA-QH-A6CX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RH 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNFSF9 MUTATED        0      1      1
  TNFSF9 WILD-TYPE    196    190    269
D136V10, multiclass
[1] "Remove cluster labels:" "TNFSF9 MUTATED"        
clus
  TNFSF9 MUTATED TNFSF9 WILD-TYPE 
               2              655 
      TCGA-02-0047       TCGA-02-0055       TCGA-02-2483       TCGA-02-2485 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-02-2486       TCGA-06-0129       TCGA-06-0130       TCGA-06-0132 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0157       TCGA-06-0158       TCGA-06-0168 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0174       TCGA-06-0178       TCGA-06-0184       TCGA-06-0219 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0238       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0649       TCGA-06-0686       TCGA-06-0743       TCGA-06-0744 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0745       TCGA-06-0747       TCGA-06-0749       TCGA-06-0750 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-0878       TCGA-06-0882       TCGA-06-1804       TCGA-06-2557 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-08-0386       TCGA-12-0616 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0821       TCGA-12-1597 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-12-5299       TCGA-14-0781       TCGA-14-0787       TCGA-14-0789 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0817       TCGA-14-1823       TCGA-14-1825 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-15-0742       TCGA-15-1444 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-1045       TCGA-19-1390       TCGA-19-2619 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1834 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1837       TCGA-27-2519       TCGA-27-2521 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2528 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2499       TCGA-28-2509 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-2510       TCGA-28-2513       TCGA-28-2514       TCGA-28-5204 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5213 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5220 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1980       TCGA-32-1982       TCGA-32-2615 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4213 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-3915 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-76-4932       TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-4943       TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-5394       TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6186       TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6666       TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6670       TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5275       TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5279       TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XA       TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XE       TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64L       TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64R       TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64W       TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A75M       TCGA-DB-A75O       TCGA-DB-A75P       TCGA-DH-5140 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143       TCGA-DH-5144 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D       TCGA-DH-A66F 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US       TCGA-DH-A7UT 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847       TCGA-DU-5849 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853       TCGA-DU-5854 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871       TCGA-DU-5872 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393       TCGA-DU-6394 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397       TCGA-DU-6399 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402       TCGA-DU-6403 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406       TCGA-DU-6407 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542       TCGA-DU-7006 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009       TCGA-DU-7010 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7011       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7014 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TI       TCGA-DU-A7TJ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74J       TCGA-HT-A74K 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7493 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CW       TCGA-QH-A6CX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6U9       TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WE       TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WL       TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WP       TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7IX       TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7J1       TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7QX       TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7R2       TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7R8       TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A7C4       TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84B       TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84H       TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84M       TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84S       TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RH 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RI       TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RN       TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RR       TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RW       TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8CA       TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8CF       TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VW-A7QS       TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WY-A858       TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WY-A85C       TCGA-WY-A85D       TCGA-WY-A85E 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFSF9 MUTATED        1      0      1      0
  TNFSF9 WILD-TYPE    139    107     82    182
D136V11, multiclass
[1] "Remove cluster labels:" "TNFSF9 MUTATED"        
clus
  TNFSF9 MUTATED TNFSF9 WILD-TYPE 
               2              510 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7014       TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TI 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7493 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX       TCGA-QH-A6CY 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6U9 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RH       TCGA-TQ-A7RI 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM       TCGA-TQ-A7RN 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ       TCGA-TQ-A7RR 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV       TCGA-TQ-A7RW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9       TCGA-VM-A8CA 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE       TCGA-VM-A8CF 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M       TCGA-VW-A7QS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K       TCGA-WY-A858 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B       TCGA-WY-A85C 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WY-A85D       TCGA-WY-A85E 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNFSF9 MUTATED        2      0      0
  TNFSF9 WILD-TYPE    221    186    103
D136V12, multiclass
[1] "Remove cluster labels:" "TNFSF9 MUTATED"        
clus
  TNFSF9 MUTATED TNFSF9 WILD-TYPE 
               2              510 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5280       TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XB       TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XF       TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64O       TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64S       TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64X       TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A75P       TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-5143       TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A66D       TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A7US       TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5847       TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5853       TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5871       TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6393       TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6397       TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6402       TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6406       TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6542       TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7009       TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7014       TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7290       TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7299       TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7304       TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8161       TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8165       TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TP       TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TU       TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A6S3       TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A76K       TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7T6       TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7TC       TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TI 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7TJ       TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5305       TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5319       TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YH       TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YL       TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YQ       TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YW       TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7Z4       TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-F6-A8O4       TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-5965       TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-6691       TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-7637       TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8181       TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8187       TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A4MT       TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A4MY       TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A6IZ       TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A70Z       TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A87N       TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7468       TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7472       TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7476       TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7480       TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7485       TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7604       TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7608       TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7616       TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7680       TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7687       TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7691       TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7695       TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7857       TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7874       TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7880       TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7902       TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8013       TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8104       TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8108       TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8113       TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8564       TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A5R7       TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A5RC       TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A617       TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A61B       TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A74L       TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-7489       TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7493 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-7495       TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-8322       TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-A5KM       TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-KT-A7W1       TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5EX       TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5F1       TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A5F6 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A72U       TCGA-P5-A72W       TCGA-P5-A72X       TCGA-P5-A72Z 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A730       TCGA-P5-A731       TCGA-P5-A733       TCGA-P5-A735 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A736       TCGA-P5-A737       TCGA-P5-A77W       TCGA-P5-A77X 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R       TCGA-QH-A65S 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z       TCGA-QH-A6CS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX       TCGA-QH-A6CY 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4       TCGA-QH-A6X5 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA       TCGA-QH-A6XC 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK       TCGA-R8-A6ML 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M       TCGA-RY-A83X 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840       TCGA-RY-A843 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS       TCGA-S9-A6TU 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX       TCGA-S9-A6TY 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1       TCGA-S9-A6U2 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8       TCGA-S9-A6U9 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RH       TCGA-TQ-A7RI 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM       TCGA-TQ-A7RN 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ       TCGA-TQ-A7RR 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV       TCGA-TQ-A7RW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9       TCGA-VM-A8CA 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE       TCGA-VM-A8CF 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M       TCGA-VW-A7QS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K       TCGA-WY-A858 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B       TCGA-WY-A85C 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WY-A85D       TCGA-WY-A85E 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFSF9 MUTATED        0      1      1      0
  TNFSF9 WILD-TYPE    127    118    105    156
D136V13, multiclass
[1] "Remove cluster labels:" "TNFSF9 MUTATED"        
clus
  TNFSF9 MUTATED TNFSF9 WILD-TYPE 
               2              506 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7014 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TI       TCGA-DU-A7TJ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K       TCGA-HT-A74L 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7493       TCGA-HW-7495 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A72U       TCGA-P5-A72W 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A737       TCGA-P5-A77W 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RH       TCGA-TQ-A7RI 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM       TCGA-TQ-A7RN 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ       TCGA-TQ-A7RR 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV       TCGA-TQ-A7RW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9       TCGA-VM-A8CA 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE       TCGA-VM-A8CF 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M       TCGA-VW-A7QS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K       TCGA-WY-A858 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B       TCGA-WY-A85C 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WY-A85D       TCGA-WY-A85E 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  TNFSF9 MUTATED        1      0      0      1      0      0
  TNFSF9 WILD-TYPE     98     77    120     56     63     92
D136V14, multiclass
[1] "Remove cluster labels:" "TNFSF9 MUTATED"        
clus
  TNFSF9 MUTATED TNFSF9 WILD-TYPE 
               2              506 
      TCGA-CS-4938       TCGA-CS-4941       TCGA-CS-4942       TCGA-CS-4943 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-4944       TCGA-CS-5390       TCGA-CS-5393       TCGA-CS-5394 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-5395       TCGA-CS-5396       TCGA-CS-5397       TCGA-CS-6186 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6188       TCGA-CS-6290       TCGA-CS-6665       TCGA-CS-6666 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-CS-6667       TCGA-CS-6668       TCGA-CS-6669       TCGA-CS-6670 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5270       TCGA-DB-5273       TCGA-DB-5274       TCGA-DB-5275 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5276       TCGA-DB-5277       TCGA-DB-5278       TCGA-DB-5279 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-5281       TCGA-DB-A4X9       TCGA-DB-A4XA       TCGA-DB-A4XB 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XC       TCGA-DB-A4XD       TCGA-DB-A4XE       TCGA-DB-A4XF 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A4XG       TCGA-DB-A4XH       TCGA-DB-A64L       TCGA-DB-A64O 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64P       TCGA-DB-A64Q       TCGA-DB-A64R       TCGA-DB-A64S 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A64U       TCGA-DB-A64V       TCGA-DB-A64W       TCGA-DB-A64X 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DB-A75K       TCGA-DB-A75L       TCGA-DB-A75O       TCGA-DB-A75P 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-5140       TCGA-DH-5141       TCGA-DH-5142       TCGA-DH-5143 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-5144       TCGA-DH-A669       TCGA-DH-A66B       TCGA-DH-A66D 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A66F       TCGA-DH-A66G       TCGA-DH-A7UR       TCGA-DH-A7US 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DH-A7UT       TCGA-DH-A7UU       TCGA-DH-A7UV       TCGA-DU-5847 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5849       TCGA-DU-5851       TCGA-DU-5852       TCGA-DU-5853 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5854       TCGA-DU-5855       TCGA-DU-5870       TCGA-DU-5871 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-5872       TCGA-DU-5874       TCGA-DU-6392       TCGA-DU-6393 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6394       TCGA-DU-6395       TCGA-DU-6396       TCGA-DU-6397 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6399       TCGA-DU-6400       TCGA-DU-6401       TCGA-DU-6402 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6403       TCGA-DU-6404       TCGA-DU-6405       TCGA-DU-6406 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-6407       TCGA-DU-6408       TCGA-DU-6410       TCGA-DU-6542 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7006       TCGA-DU-7007       TCGA-DU-7008       TCGA-DU-7009 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7010       TCGA-DU-7012       TCGA-DU-7013       TCGA-DU-7014 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7015       TCGA-DU-7018       TCGA-DU-7019       TCGA-DU-7290 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7292       TCGA-DU-7294       TCGA-DU-7298       TCGA-DU-7299 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7300       TCGA-DU-7301       TCGA-DU-7302       TCGA-DU-7304 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-7306       TCGA-DU-7309       TCGA-DU-8158       TCGA-DU-8161 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8162       TCGA-DU-8163       TCGA-DU-8164       TCGA-DU-8165 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-8166       TCGA-DU-8167       TCGA-DU-8168       TCGA-DU-A5TP 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TR       TCGA-DU-A5TS       TCGA-DU-A5TT       TCGA-DU-A5TU 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A5TW       TCGA-DU-A5TY       TCGA-DU-A6S2       TCGA-DU-A6S3 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A6S6       TCGA-DU-A6S7       TCGA-DU-A6S8       TCGA-DU-A76K 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A76L       TCGA-DU-A76O       TCGA-DU-A76R       TCGA-DU-A7T6 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7T8       TCGA-DU-A7TA       TCGA-DU-A7TB       TCGA-DU-A7TC 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-DU-A7TD       TCGA-DU-A7TG       TCGA-DU-A7TI       TCGA-DU-A7TJ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5302       TCGA-E1-5303       TCGA-E1-5304       TCGA-E1-5305 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5307       TCGA-E1-5311       TCGA-E1-5318       TCGA-E1-5319 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-5322       TCGA-E1-A7YD       TCGA-E1-A7YE       TCGA-E1-A7YH 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YI       TCGA-E1-A7YJ       TCGA-E1-A7YK       TCGA-E1-A7YL 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YM       TCGA-E1-A7YN       TCGA-E1-A7YO       TCGA-E1-A7YQ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YS       TCGA-E1-A7YU       TCGA-E1-A7YV       TCGA-E1-A7YW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7YY       TCGA-E1-A7Z2       TCGA-E1-A7Z3       TCGA-E1-A7Z4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-E1-A7Z6       TCGA-EZ-7264       TCGA-F6-A8O3       TCGA-F6-A8O4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-5962       TCGA-FG-5963       TCGA-FG-5964       TCGA-FG-5965 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-6688       TCGA-FG-6689       TCGA-FG-6690       TCGA-FG-6691 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-6692       TCGA-FG-7634       TCGA-FG-7636       TCGA-FG-7637 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-7638       TCGA-FG-7641       TCGA-FG-7643       TCGA-FG-8181 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8182       TCGA-FG-8185       TCGA-FG-8186       TCGA-FG-8187 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-8188       TCGA-FG-8189       TCGA-FG-8191       TCGA-FG-A4MT 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A4MU       TCGA-FG-A4MW       TCGA-FG-A4MX       TCGA-FG-A4MY 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A60J       TCGA-FG-A60K       TCGA-FG-A60L       TCGA-FG-A6IZ 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A6J1       TCGA-FG-A6J3       TCGA-FG-A70Y       TCGA-FG-A70Z 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A710       TCGA-FG-A711       TCGA-FG-A713       TCGA-FG-A87N 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-FG-A87Q       TCGA-FN-7833       TCGA-HT-7467       TCGA-HT-7468 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7469       TCGA-HT-7470       TCGA-HT-7471       TCGA-HT-7472 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7473       TCGA-HT-7474       TCGA-HT-7475       TCGA-HT-7476 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7477       TCGA-HT-7478       TCGA-HT-7479       TCGA-HT-7480 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7481       TCGA-HT-7482       TCGA-HT-7483       TCGA-HT-7485 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7601       TCGA-HT-7602       TCGA-HT-7603       TCGA-HT-7604 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7605       TCGA-HT-7606       TCGA-HT-7607       TCGA-HT-7608 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7609       TCGA-HT-7610       TCGA-HT-7611       TCGA-HT-7616 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7620       TCGA-HT-7676       TCGA-HT-7677       TCGA-HT-7680 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7681       TCGA-HT-7684       TCGA-HT-7686       TCGA-HT-7687 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7688       TCGA-HT-7689       TCGA-HT-7690       TCGA-HT-7691 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7692       TCGA-HT-7693       TCGA-HT-7694       TCGA-HT-7695 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7854       TCGA-HT-7855       TCGA-HT-7856       TCGA-HT-7857 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7858       TCGA-HT-7860       TCGA-HT-7873       TCGA-HT-7874 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7875       TCGA-HT-7877       TCGA-HT-7879       TCGA-HT-7880 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-7881       TCGA-HT-7882       TCGA-HT-7884       TCGA-HT-7902 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8010       TCGA-HT-8011       TCGA-HT-8012       TCGA-HT-8013 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8015       TCGA-HT-8018       TCGA-HT-8019       TCGA-HT-8104 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8105       TCGA-HT-8106       TCGA-HT-8107       TCGA-HT-8108 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8109       TCGA-HT-8110       TCGA-HT-8111       TCGA-HT-8113 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-8114       TCGA-HT-8558       TCGA-HT-8563       TCGA-HT-8564 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A4DS       TCGA-HT-A4DV       TCGA-HT-A5R5       TCGA-HT-A5R7 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A5R9       TCGA-HT-A5RA       TCGA-HT-A5RB       TCGA-HT-A5RC 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A614       TCGA-HT-A615       TCGA-HT-A616       TCGA-HT-A617 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A618       TCGA-HT-A619       TCGA-HT-A61A       TCGA-HT-A61B 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A61C       TCGA-HT-A74H       TCGA-HT-A74K       TCGA-HT-A74L 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HT-A74O       TCGA-HW-7486       TCGA-HW-7487       TCGA-HW-7489 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-7490       TCGA-HW-7491       TCGA-HW-7493       TCGA-HW-7495 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-8319       TCGA-HW-8320       TCGA-HW-8321       TCGA-HW-8322 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-HW-A5KJ       TCGA-HW-A5KK       TCGA-HW-A5KL       TCGA-HW-A5KM 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-IK-7675       TCGA-IK-8125       TCGA-KT-A74X       TCGA-KT-A7W1 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5ET       TCGA-P5-A5EU       TCGA-P5-A5EV       TCGA-P5-A5EX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5EY       TCGA-P5-A5EZ       TCGA-P5-A5F0       TCGA-P5-A5F1 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A5F2       TCGA-P5-A5F4       TCGA-P5-A72U       TCGA-P5-A72W 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A72X       TCGA-P5-A72Z       TCGA-P5-A730       TCGA-P5-A731 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A733       TCGA-P5-A735       TCGA-P5-A737       TCGA-P5-A77W 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-P5-A77X       TCGA-P5-A780       TCGA-P5-A781       TCGA-QH-A65R 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A65S       TCGA-QH-A65V       TCGA-QH-A65X       TCGA-QH-A65Z 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6CS       TCGA-QH-A6CU       TCGA-QH-A6CV       TCGA-QH-A6CX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6CY       TCGA-QH-A6CZ       TCGA-QH-A6X3       TCGA-QH-A6X4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6X5       TCGA-QH-A6X8       TCGA-QH-A6X9       TCGA-QH-A6XA 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-QH-A6XC       TCGA-QH-A86X       TCGA-QH-A870       TCGA-R8-A6MK 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-R8-A6ML       TCGA-R8-A6MO       TCGA-R8-A6YH       TCGA-R8-A73M 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-RY-A83X       TCGA-RY-A83Y       TCGA-RY-A83Z       TCGA-RY-A840 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-RY-A843       TCGA-RY-A845       TCGA-RY-A847       TCGA-S9-A6TS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TU       TCGA-S9-A6TV       TCGA-S9-A6TW       TCGA-S9-A6TX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6TY       TCGA-S9-A6TZ       TCGA-S9-A6U0       TCGA-S9-A6U1 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6U2       TCGA-S9-A6U5       TCGA-S9-A6U6       TCGA-S9-A6U8 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6UA       TCGA-S9-A6UB       TCGA-S9-A6WD       TCGA-S9-A6WE 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WG       TCGA-S9-A6WH       TCGA-S9-A6WI       TCGA-S9-A6WL 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WM       TCGA-S9-A6WN       TCGA-S9-A6WO       TCGA-S9-A6WP 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A6WQ       TCGA-S9-A7IQ       TCGA-S9-A7IS       TCGA-S9-A7IX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7IY       TCGA-S9-A7IZ       TCGA-S9-A7J0       TCGA-S9-A7J1 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7J2       TCGA-S9-A7J3       TCGA-S9-A7QW       TCGA-S9-A7QX 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7QY       TCGA-S9-A7QZ       TCGA-S9-A7R1       TCGA-S9-A7R2 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A7R3       TCGA-S9-A7R4       TCGA-S9-A7R7       TCGA-S9-A7R8 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-S9-A89V       TCGA-S9-A89Z       TCGA-TM-A7C3       TCGA-TM-A7C4 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A7C5       TCGA-TM-A7CA       TCGA-TM-A7CF       TCGA-TM-A84B 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84C       TCGA-TM-A84F       TCGA-TM-A84G       TCGA-TM-A84H 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84I       TCGA-TM-A84J       TCGA-TM-A84L       TCGA-TM-A84M 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84O       TCGA-TM-A84Q       TCGA-TM-A84R       TCGA-TM-A84S 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TM-A84T       TCGA-TQ-A7RF       TCGA-TQ-A7RH       TCGA-TQ-A7RI 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RJ       TCGA-TQ-A7RK       TCGA-TQ-A7RM       TCGA-TQ-A7RN 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RO       TCGA-TQ-A7RP       TCGA-TQ-A7RQ       TCGA-TQ-A7RR 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A7RS       TCGA-TQ-A7RU       TCGA-TQ-A7RV       TCGA-TQ-A7RW 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-TQ-A8XE       TCGA-VM-A8C8       TCGA-VM-A8C9       TCGA-VM-A8CA 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8CB       TCGA-VM-A8CD       TCGA-VM-A8CE       TCGA-VM-A8CF 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VM-A8CH       TCGA-VV-A829       TCGA-VV-A86M       TCGA-VW-A7QS 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-VW-A8FI       TCGA-W9-A837       TCGA-WH-A86K       TCGA-WY-A858 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WY-A859       TCGA-WY-A85A       TCGA-WY-A85B       TCGA-WY-A85C 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 
      TCGA-WY-A85D       TCGA-WY-A85E 
"TNFSF9 WILD-TYPE" "TNFSF9 WILD-TYPE" 

Clustering(137) Variable = IL4R MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IL4R MUTATED        1      1      2      2
  IL4R WILD-TYPE     77     40     62     55
D137V1, multiclass
        clus
vv       IL4R MUTATED IL4R WILD-TYPE
  CLUS_1            1             77
  CLUS_2            1             40
  CLUS_3            2             62
  CLUS_4            2             55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IL4R MUTATED        0      1      2      3
  IL4R WILD-TYPE     63     49     46     76
D137V2, multiclass
        clus
vv       IL4R MUTATED IL4R WILD-TYPE
  CLUS_1            0             63
  CLUS_2            1             49
  CLUS_3            2             46
  CLUS_4            3             76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IL4R MUTATED        1      3      2      2
  IL4R WILD-TYPE     69     95     42     61
D137V3, multiclass
        clus
vv       IL4R MUTATED IL4R WILD-TYPE
  CLUS_1            1             69
  CLUS_2            3             95
  CLUS_3            2             42
  CLUS_4            2             61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IL4R MUTATED        4      1      3
  IL4R WILD-TYPE    134     60     73
D137V4, multiclass
        clus
vv       IL4R MUTATED IL4R WILD-TYPE
  CLUS_1            4            134
  CLUS_2            1             60
  CLUS_3            3             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IL4R MUTATED        8      2      0
  IL4R WILD-TYPE    284    430     62
D137V5, multiclass
        clus
vv       IL4R MUTATED IL4R WILD-TYPE
  CLUS_1            8            284
  CLUS_2            2            430
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IL4R MUTATED        2      1      1      1
  IL4R WILD-TYPE    151    222     87    160
D137V6, multiclass
        clus
vv       IL4R MUTATED IL4R WILD-TYPE
  CLUS_1            2            151
  CLUS_2            1            222
  CLUS_3            1             87
  CLUS_4            1            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IL4R MUTATED        2      4      3      0
  IL4R WILD-TYPE    183    151    135     95
D137V7, multiclass
        clus
vv       IL4R MUTATED IL4R WILD-TYPE
  CLUS_1            2            183
  CLUS_2            4            151
  CLUS_3            3            135
  CLUS_4            0             95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IL4R MUTATED        2      5      2
  IL4R WILD-TYPE    203    215    146
D137V8, multiclass
        clus
vv       IL4R MUTATED IL4R WILD-TYPE
  CLUS_1            2            203
  CLUS_2            5            215
  CLUS_3            2            146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IL4R MUTATED        4      2      0
  IL4R WILD-TYPE    234    189    228
D137V9, multiclass
        clus
vv       IL4R MUTATED IL4R WILD-TYPE
  CLUS_1            4            234
  CLUS_2            2            189
  CLUS_3            0            228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IL4R MUTATED        4      0      2
  IL4R WILD-TYPE    192    191    268
D137V10, multiclass
        clus
vv       IL4R MUTATED IL4R WILD-TYPE
  CLUS_1            4            192
  CLUS_2            0            191
  CLUS_3            2            268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IL4R MUTATED        0      1      0      1
  IL4R WILD-TYPE    140    106     83    181
D137V11, multiclass
[1] "Remove cluster labels:" "IL4R MUTATED"          
clus
  IL4R MUTATED IL4R WILD-TYPE 
             2            510 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T8 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6     TCGA-P5-A72U 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A736 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY     TCGA-QH-A6CZ 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5     TCGA-QH-A6X8 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC     TCGA-QH-A86X 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML     TCGA-R8-A6MO 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X     TCGA-RY-A83Y 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843     TCGA-RY-A845 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU     TCGA-S9-A6TV 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY     TCGA-S9-A6TZ 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2     TCGA-S9-A6U5 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9     TCGA-S9-A6UA 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IL4R MUTATED        0      1      1
  IL4R WILD-TYPE    223    185    102
D137V12, multiclass
[1] "Remove cluster labels:" "IL4R MUTATED"          
clus
  IL4R MUTATED IL4R WILD-TYPE 
             2            510 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T8 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6     TCGA-P5-A72U 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A736 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY     TCGA-QH-A6CZ 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5     TCGA-QH-A6X8 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC     TCGA-QH-A86X 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML     TCGA-R8-A6MO 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X     TCGA-RY-A83Y 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843     TCGA-RY-A845 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU     TCGA-S9-A6TV 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY     TCGA-S9-A6TZ 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2     TCGA-S9-A6U5 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9     TCGA-S9-A6UA 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IL4R MUTATED        0      0      1      1
  IL4R WILD-TYPE    127    119    105    155
D137V13, multiclass
[1] "Remove cluster labels:" "IL4R MUTATED"          
clus
  IL4R MUTATED IL4R WILD-TYPE 
             2            506 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A75K 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393     TCGA-DU-6394 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T8     TCGA-DU-A7TA 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319     TCGA-HW-8320 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ     TCGA-HW-A5KK 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET     TCGA-P5-A5EU 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F2 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6UA 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  IL4R MUTATED        0      0      0      0      0      2
  IL4R WILD-TYPE     99     77    120     57     63     90
D137V14, multiclass
[1] "Remove cluster labels:" "IL4R MUTATED"          
clus
  IL4R MUTATED IL4R WILD-TYPE 
             2            506 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A75K 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393     TCGA-DU-6394 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T8     TCGA-DU-A7TA 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O     TCGA-HW-7486 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490     TCGA-HW-7491 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319     TCGA-HW-8320 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ     TCGA-HW-A5KK 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET     TCGA-P5-A5EU 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F2 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6UA 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" "IL4R WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"IL4R WILD-TYPE" "IL4R WILD-TYPE" 

Clustering(138) Variable = TJAP1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TJAP1 MUTATED        0      1      1      0
  TJAP1 WILD-TYPE     78     40     63     57
D138V1, multiclass
[1] "Remove cluster labels:" "TJAP1 MUTATED"         
clus
  TJAP1 MUTATED TJAP1 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2629      TCGA-19-2631      TCGA-19-4068 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5133 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4935      TCGA-76-6191 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TJAP1 MUTATED        0      1      0      1
  TJAP1 WILD-TYPE     63     49     48     78
D138V2, multiclass
[1] "Remove cluster labels:" "TJAP1 MUTATED"         
clus
  TJAP1 MUTATED TJAP1 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2629      TCGA-19-2631      TCGA-19-4068 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5133 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4935      TCGA-76-6191 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TJAP1 MUTATED        0      0      1      1
  TJAP1 WILD-TYPE     70     98     43     62
D138V3, multiclass
[1] "Remove cluster labels:" "TJAP1 MUTATED"         
clus
  TJAP1 MUTATED TJAP1 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5133 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4935      TCGA-76-6191 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-87-5896 
"TJAP1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TJAP1 MUTATED        1      1      0
  TJAP1 WILD-TYPE    137     60     76
D138V4, multiclass
[1] "Remove cluster labels:" "TJAP1 MUTATED"         
clus
  TJAP1 MUTATED TJAP1 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5133 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4935      TCGA-76-6191 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-87-5896 
"TJAP1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TJAP1 MUTATED        2      0      1
  TJAP1 WILD-TYPE    290    432     61
D138V5, multiclass
        clus
vv       TJAP1 MUTATED TJAP1 WILD-TYPE
  CLUS_1             2             290
  CLUS_2             0             432
  CLUS_3             1              61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TJAP1 MUTATED        3      0      0      0
  TJAP1 WILD-TYPE    150    223     88    161
D138V6, multiclass
        clus
vv       TJAP1 MUTATED TJAP1 WILD-TYPE
  CLUS_1             3             150
  CLUS_2             0             223
  CLUS_3             0              88
  CLUS_4             0             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TJAP1 MUTATED        2      0      0      0
  TJAP1 WILD-TYPE    183    155    138     95
D138V7, multiclass
[1] "Remove cluster labels:" "TJAP1 MUTATED"         
clus
  TJAP1 MUTATED TJAP1 WILD-TYPE 
              2             571 
     TCGA-02-0003      TCGA-02-2470      TCGA-02-2485      TCGA-06-0126 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0128      TCGA-06-0129      TCGA-06-0130      TCGA-06-0154 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0155      TCGA-06-0189      TCGA-06-0238      TCGA-06-0644 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0650      TCGA-06-0875      TCGA-06-0876      TCGA-06-0877 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0879      TCGA-06-0882      TCGA-06-0939 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-1804      TCGA-06-1806      TCGA-06-2557      TCGA-06-2558 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-2559      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2570      TCGA-06-5408 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-0692      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5301 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0862      TCGA-14-0871      TCGA-14-1823 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-16-0846      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2625      TCGA-19-2631      TCGA-19-4068 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-5953      TCGA-19-5954      TCGA-19-5955      TCGA-19-5958 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-5959      TCGA-19-5960      TCGA-26-1442      TCGA-26-5133 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-6173      TCGA-26-6174      TCGA-27-1830 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-2518      TCGA-27-2528      TCGA-28-1747 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2501      TCGA-28-5208      TCGA-28-5214 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-5222      TCGA-41-2573 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-41-6646      TCGA-74-6573 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-74-6575      TCGA-74-6577      TCGA-74-6578      TCGA-74-6584 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-6192      TCGA-76-6193 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6656 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-CS-4938 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-4942      TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-5393      TCGA-CS-5394      TCGA-CS-5396      TCGA-CS-5397 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6665      TCGA-CS-6666 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5280 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M      TCGA-DB-A75O 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A66B      TCGA-DH-A66D 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7US      TCGA-DU-5847 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393      TCGA-DU-6394 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7011      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7300 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S8 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A7T6      TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TD 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YL 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J3 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A713 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-HT-7467      TCGA-HT-7468 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8109 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8564      TCGA-HT-A4DV      TCGA-HT-A5R5 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RB      TCGA-HT-A614 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A74H 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A74J      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65S      TCGA-QH-A65V 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX      TCGA-QH-A6CY 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-R8-A6YH      TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-S9-A6TS      TCGA-S9-A6TU 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6U0 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6U1      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U9 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7IS      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7QX      TCGA-S9-A7QZ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7R1      TCGA-S9-A7R4      TCGA-S9-A7R8      TCGA-TM-A7C5 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RK      TCGA-TQ-A7RN      TCGA-TQ-A7RQ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CH 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-W9-A837 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TJAP1 MUTATED        1      1      0
  TJAP1 WILD-TYPE    204    219    148
D138V8, multiclass
[1] "Remove cluster labels:" "TJAP1 MUTATED"         
clus
  TJAP1 MUTATED TJAP1 WILD-TYPE 
              2             571 
     TCGA-02-0003      TCGA-02-2470      TCGA-02-2485      TCGA-06-0126 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0128      TCGA-06-0129      TCGA-06-0130      TCGA-06-0154 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0155      TCGA-06-0189      TCGA-06-0238      TCGA-06-0644 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0650      TCGA-06-0875      TCGA-06-0876      TCGA-06-0877 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0879      TCGA-06-0882      TCGA-06-0939 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-1804      TCGA-06-1806      TCGA-06-2557      TCGA-06-2558 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-2559      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2570      TCGA-06-5408 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-0692      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5301 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0862      TCGA-14-0871      TCGA-14-1823 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-16-0846      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2625      TCGA-19-2631      TCGA-19-4068 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-5953      TCGA-19-5954      TCGA-19-5955      TCGA-19-5958 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-5959      TCGA-19-5960      TCGA-26-1442      TCGA-26-5133 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-6173      TCGA-26-6174      TCGA-27-1830 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-2518      TCGA-27-2528      TCGA-28-1747 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2501      TCGA-28-5208      TCGA-28-5214 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-5222      TCGA-41-2573 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-41-6646      TCGA-74-6573 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-74-6575      TCGA-74-6577      TCGA-74-6578      TCGA-74-6584 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-6192      TCGA-76-6193 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6656 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-CS-4938 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-4942      TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-5393      TCGA-CS-5394      TCGA-CS-5396      TCGA-CS-5397 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6665      TCGA-CS-6666 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5280 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M      TCGA-DB-A75O 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A66B      TCGA-DH-A66D 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7US      TCGA-DU-5847 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393      TCGA-DU-6394 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7011      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7300 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S8 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A7T6      TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TD 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YL 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-6691      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J3 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A713 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-HT-7467      TCGA-HT-7468 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8109 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8564      TCGA-HT-A4DV      TCGA-HT-A5R5 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RB      TCGA-HT-A614 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A74H 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A74J      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65S      TCGA-QH-A65V 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX      TCGA-QH-A6CY 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-R8-A6YH      TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-S9-A6TS      TCGA-S9-A6TU 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6U0 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6U1      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U9 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7IS      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7QX      TCGA-S9-A7QZ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7R1      TCGA-S9-A7R4      TCGA-S9-A7R8      TCGA-TM-A7C5 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RK      TCGA-TQ-A7RN      TCGA-TQ-A7RQ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CH 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-W9-A837 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TJAP1 MUTATED        2      0      0
  TJAP1 WILD-TYPE    236    191    228
D138V9, multiclass
[1] "Remove cluster labels:" "TJAP1 MUTATED"         
clus
  TJAP1 MUTATED TJAP1 WILD-TYPE 
              2             655 
     TCGA-02-0047      TCGA-02-0055      TCGA-02-2483      TCGA-02-2485 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-02-2486      TCGA-06-0129      TCGA-06-0130      TCGA-06-0132 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0157      TCGA-06-0158      TCGA-06-0168 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0174      TCGA-06-0178      TCGA-06-0184      TCGA-06-0219 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0238      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0649      TCGA-06-0686      TCGA-06-0743      TCGA-06-0744 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0745      TCGA-06-0747      TCGA-06-0749      TCGA-06-0750 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0882      TCGA-06-1804      TCGA-06-2557 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-08-0386      TCGA-12-0616 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0821      TCGA-12-1597 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-5299      TCGA-14-0781      TCGA-14-0787      TCGA-14-0789 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0817      TCGA-14-1823      TCGA-14-1825 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-15-0742      TCGA-15-1444 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-1045      TCGA-19-1390      TCGA-19-2619 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5133      TCGA-26-5134 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-27-1830 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1834      TCGA-27-1835 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-1837      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2528      TCGA-28-1747 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2499      TCGA-28-2509      TCGA-28-2510 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5213      TCGA-28-5215 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5220      TCGA-32-1970 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-2615      TCGA-32-2632 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4213      TCGA-32-5222 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-3915      TCGA-41-4097 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-41-5651      TCGA-76-4925      TCGA-76-4926      TCGA-76-4927 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-4928      TCGA-76-4929      TCGA-76-4931      TCGA-76-4932 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011      TCGA-DU-7012 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7013      TCGA-DU-7014      TCGA-DU-7015      TCGA-DU-7018 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A74J      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6      TCGA-P5-A72U 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A736 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX      TCGA-QH-A6CY 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TJAP1 MUTATED        1      1      0
  TJAP1 WILD-TYPE    195    190    270
D138V10, multiclass
[1] "Remove cluster labels:" "TJAP1 MUTATED"         
clus
  TJAP1 MUTATED TJAP1 WILD-TYPE 
              2             655 
     TCGA-02-0047      TCGA-02-0055      TCGA-02-2483      TCGA-02-2485 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-02-2486      TCGA-06-0129      TCGA-06-0130      TCGA-06-0132 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0157      TCGA-06-0158      TCGA-06-0168 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0174      TCGA-06-0178      TCGA-06-0184      TCGA-06-0219 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0238      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0649      TCGA-06-0686      TCGA-06-0743      TCGA-06-0744 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0745      TCGA-06-0747      TCGA-06-0749      TCGA-06-0750 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0882      TCGA-06-1804      TCGA-06-2557 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-08-0386      TCGA-12-0616 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0821      TCGA-12-1597 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-12-5299      TCGA-14-0781      TCGA-14-0787      TCGA-14-0789 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0817      TCGA-14-1823      TCGA-14-1825 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-15-0742      TCGA-15-1444 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-1045      TCGA-19-1390      TCGA-19-2619 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5133      TCGA-26-5134 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-27-1830 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1834      TCGA-27-1835 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-1837      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2528      TCGA-28-1747 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2499      TCGA-28-2509      TCGA-28-2510 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5213      TCGA-28-5215 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5220      TCGA-32-1970 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-2615      TCGA-32-2632 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4213      TCGA-32-5222 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-3915      TCGA-41-4097 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-41-5651      TCGA-76-4925      TCGA-76-4926      TCGA-76-4927 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-76-4928      TCGA-76-4929      TCGA-76-4931      TCGA-76-4932 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011      TCGA-DU-7012 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7013      TCGA-DU-7014      TCGA-DU-7015      TCGA-DU-7018 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300      TCGA-DU-7301 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306      TCGA-DU-7309 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162      TCGA-DU-8163 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166      TCGA-DU-8167 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR      TCGA-DU-A5TS 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW      TCGA-DU-A5TY 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6      TCGA-DU-A6S7 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8      TCGA-DU-A7TA 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD      TCGA-DU-A7TG 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A74J      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6      TCGA-P5-A72U 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A736 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX      TCGA-QH-A6CY 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TJAP1 MUTATED        0      1      0      0
  TJAP1 WILD-TYPE    140    106     83    182
D138V11, multiclass
[1] "Remove cluster labels:" "TJAP1 MUTATED"         
clus
  TJAP1 MUTATED TJAP1 WILD-TYPE 
              1             511 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TJAP1 MUTATED        0      0      1
  TJAP1 WILD-TYPE    223    186    102
D138V12, multiclass
[1] "Remove cluster labels:" "TJAP1 MUTATED"         
clus
  TJAP1 MUTATED TJAP1 WILD-TYPE 
              1             511 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A4DS      TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A5R9      TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A61C      TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TJAP1 MUTATED        0      0      0      1
  TJAP1 WILD-TYPE    127    119    106    155
D138V13, multiclass
[1] "Remove cluster labels:" "TJAP1 MUTATED"         
clus
  TJAP1 MUTATED TJAP1 WILD-TYPE 
              1             507 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393      TCGA-DU-6394 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014      TCGA-DU-7015 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  TJAP1 MUTATED        0      0      0      0      0      1
  TJAP1 WILD-TYPE     99     77    120     57     63     91
D138V14, multiclass
[1] "Remove cluster labels:" "TJAP1 MUTATED"         
clus
  TJAP1 MUTATED TJAP1 WILD-TYPE 
              1             507 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393      TCGA-DU-6394 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014      TCGA-DU-7015 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A65S      TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6CS      TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" "TJAP1 WILD-TYPE" 

Clustering(139) Variable = KLKB1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KLKB1 MUTATED        1      0      0      1
  KLKB1 WILD-TYPE     77     41     64     56
D139V1, multiclass
[1] "Remove cluster labels:" "KLKB1 MUTATED"         
clus
  KLKB1 MUTATED KLKB1 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2629      TCGA-19-2631      TCGA-19-4068 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5132 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-5135      TCGA-26-5136 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-26-5139      TCGA-27-1830      TCGA-27-1831      TCGA-27-1832 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-27-1833      TCGA-27-1834      TCGA-27-1835      TCGA-27-1836 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-27-1837      TCGA-27-1838      TCGA-27-2518      TCGA-27-2521 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3915 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KLKB1 MUTATED        0      0      0      2
  KLKB1 WILD-TYPE     63     50     48     77
D139V2, multiclass
[1] "Remove cluster labels:" "KLKB1 MUTATED"         
clus
  KLKB1 MUTATED KLKB1 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2629      TCGA-19-2631      TCGA-19-4068 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5132 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-5135      TCGA-26-5136 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-26-5139      TCGA-27-1830      TCGA-27-1831      TCGA-27-1832 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-27-1833      TCGA-27-1834      TCGA-27-1835      TCGA-27-1836 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-27-1837      TCGA-27-1838      TCGA-27-2518      TCGA-27-2521 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3915 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KLKB1 MUTATED        0      2      0      0
  KLKB1 WILD-TYPE     70     96     44     63
D139V3, multiclass
[1] "Remove cluster labels:" "KLKB1 MUTATED"         
clus
  KLKB1 MUTATED KLKB1 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5132 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-5135      TCGA-26-5136 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-26-5139      TCGA-26-6173      TCGA-26-6174      TCGA-27-1830 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1836      TCGA-27-1837      TCGA-27-1838 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-87-5896 
"KLKB1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KLKB1 MUTATED        1      0      1
  KLKB1 WILD-TYPE    137     61     75
D139V4, multiclass
[1] "Remove cluster labels:" "KLKB1 MUTATED"         
clus
  KLKB1 MUTATED KLKB1 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1439      TCGA-26-1442      TCGA-26-5132 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-5135      TCGA-26-5136 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-26-5139      TCGA-26-6173      TCGA-26-6174      TCGA-27-1830 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1836      TCGA-27-1837      TCGA-27-1838 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-27-2518      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" "KLKB1 WILD-TYPE" 
     TCGA-87-5896 
"KLKB1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KLKB1 MUTATED        3      4      0
  KLKB1 WILD-TYPE    289    428     62
D139V5, multiclass
        clus
vv       KLKB1 MUTATED KLKB1 WILD-TYPE
  CLUS_1             3             289
  CLUS_2             4             428
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KLKB1 MUTATED        1      3      0      1
  KLKB1 WILD-TYPE    152    220     88    160
D139V6, multiclass
        clus
vv       KLKB1 MUTATED KLKB1 WILD-TYPE
  CLUS_1             1             152
  CLUS_2             3             220
  CLUS_3             0              88
  CLUS_4             1             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KLKB1 MUTATED        4      2      0      0
  KLKB1 WILD-TYPE    181    153    138     95
D139V7, multiclass
        clus
vv       KLKB1 MUTATED KLKB1 WILD-TYPE
  CLUS_1             4             181
  CLUS_2             2             153
  CLUS_3             0             138
  CLUS_4             0              95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KLKB1 MUTATED        2      2      2
  KLKB1 WILD-TYPE    203    218    146
D139V8, multiclass
        clus
vv       KLKB1 MUTATED KLKB1 WILD-TYPE
  CLUS_1             2             203
  CLUS_2             2             218
  CLUS_3             2             146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KLKB1 MUTATED        2      2      2
  KLKB1 WILD-TYPE    236    189    226
D139V9, multiclass
        clus
vv       KLKB1 MUTATED KLKB1 WILD-TYPE
  CLUS_1             2             236
  CLUS_2             2             189
  CLUS_3             2             226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KLKB1 MUTATED        1      3      2
  KLKB1 WILD-TYPE    195    188    268
D139V10, multiclass
        clus
vv       KLKB1 MUTATED KLKB1 WILD-TYPE
  CLUS_1             1             195
  CLUS_2             3             188
  CLUS_3             2             268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KLKB1 MUTATED        2      1      0      2
  KLKB1 WILD-TYPE    138    106     83    180
D139V11, multiclass
        clus
vv       KLKB1 MUTATED KLKB1 WILD-TYPE
  CLUS_1             2             138
  CLUS_2             1             106
  CLUS_3             0              83
  CLUS_4             2             180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KLKB1 MUTATED        2      2      1
  KLKB1 WILD-TYPE    221    184    102
D139V12, multiclass
        clus
vv       KLKB1 MUTATED KLKB1 WILD-TYPE
  CLUS_1             2             221
  CLUS_2             2             184
  CLUS_3             1             102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KLKB1 MUTATED        2      0      0      3
  KLKB1 WILD-TYPE    125    119    106    153
D139V13, multiclass
        clus
vv       KLKB1 MUTATED KLKB1 WILD-TYPE
  CLUS_1             2             125
  CLUS_2             0             119
  CLUS_3             0             106
  CLUS_4             3             153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  KLKB1 MUTATED        2      0      2      0      0      1
  KLKB1 WILD-TYPE     97     77    118     57     63     91
D139V14, multiclass
        clus
vv       KLKB1 MUTATED KLKB1 WILD-TYPE
  CLUS_1             2              97
  CLUS_2             0              77
  CLUS_3             2             118
  CLUS_4             0              57
  CLUS_5             0              63
  CLUS_6             1              91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(140) Variable = CHGB MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CHGB MUTATED        2      0      1      0
  CHGB WILD-TYPE     76     41     63     57
D140V1, multiclass
        clus
vv       CHGB MUTATED CHGB WILD-TYPE
  CLUS_1            2             76
  CLUS_2            0             41
  CLUS_3            1             63
  CLUS_4            0             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CHGB MUTATED        2      0      0      1
  CHGB WILD-TYPE     61     50     48     78
D140V2, multiclass
        clus
vv       CHGB MUTATED CHGB WILD-TYPE
  CLUS_1            2             61
  CLUS_2            0             50
  CLUS_3            0             48
  CLUS_4            1             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CHGB MUTATED        1      2      0      1
  CHGB WILD-TYPE     69     96     44     62
D140V3, multiclass
        clus
vv       CHGB MUTATED CHGB WILD-TYPE
  CLUS_1            1             69
  CLUS_2            2             96
  CLUS_3            0             44
  CLUS_4            1             62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CHGB MUTATED        1      1      2
  CHGB WILD-TYPE    137     60     74
D140V4, multiclass
        clus
vv       CHGB MUTATED CHGB WILD-TYPE
  CLUS_1            1            137
  CLUS_2            1             60
  CLUS_3            2             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CHGB MUTATED        5      3      0
  CHGB WILD-TYPE    287    429     62
D140V5, multiclass
        clus
vv       CHGB MUTATED CHGB WILD-TYPE
  CLUS_1            5            287
  CLUS_2            3            429
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CHGB MUTATED        3      2      0      1
  CHGB WILD-TYPE    150    221     88    160
D140V6, multiclass
        clus
vv       CHGB MUTATED CHGB WILD-TYPE
  CLUS_1            3            150
  CLUS_2            2            221
  CLUS_3            0             88
  CLUS_4            1            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CHGB MUTATED        3      1      2      1
  CHGB WILD-TYPE    182    154    136     94
D140V7, multiclass
        clus
vv       CHGB MUTATED CHGB WILD-TYPE
  CLUS_1            3            182
  CLUS_2            1            154
  CLUS_3            2            136
  CLUS_4            1             94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CHGB MUTATED        3      4      0
  CHGB WILD-TYPE    202    216    148
D140V8, multiclass
        clus
vv       CHGB MUTATED CHGB WILD-TYPE
  CLUS_1            3            202
  CLUS_2            4            216
  CLUS_3            0            148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CHGB MUTATED        3      1      2
  CHGB WILD-TYPE    235    190    226
D140V9, multiclass
        clus
vv       CHGB MUTATED CHGB WILD-TYPE
  CLUS_1            3            235
  CLUS_2            1            190
  CLUS_3            2            226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CHGB MUTATED        2      3      1
  CHGB WILD-TYPE    194    188    269
D140V10, multiclass
        clus
vv       CHGB MUTATED CHGB WILD-TYPE
  CLUS_1            2            194
  CLUS_2            3            188
  CLUS_3            1            269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CHGB MUTATED        2      1      0      1
  CHGB WILD-TYPE    138    106     83    181
D140V11, multiclass
        clus
vv       CHGB MUTATED CHGB WILD-TYPE
  CLUS_1            2            138
  CLUS_2            1            106
  CLUS_3            0             83
  CLUS_4            1            181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CHGB MUTATED        1      1      2
  CHGB WILD-TYPE    222    185    101
D140V12, multiclass
        clus
vv       CHGB MUTATED CHGB WILD-TYPE
  CLUS_1            1            222
  CLUS_2            1            185
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CHGB MUTATED        1      1      0      2
  CHGB WILD-TYPE    126    118    106    154
D140V13, multiclass
        clus
vv       CHGB MUTATED CHGB WILD-TYPE
  CLUS_1            1            126
  CLUS_2            1            118
  CLUS_3            0            106
  CLUS_4            2            154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  CHGB MUTATED        2      0      1      0      0      1
  CHGB WILD-TYPE     97     77    119     57     63     91
D140V14, multiclass
        clus
vv       CHGB MUTATED CHGB WILD-TYPE
  CLUS_1            2             97
  CLUS_2            0             77
  CLUS_3            1            119
  CLUS_4            0             57
  CLUS_5            0             63
  CLUS_6            1             91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(141) Variable = GABRA6 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GABRA6 MUTATED        1      0      6      2
  GABRA6 WILD-TYPE     77     41     58     55
D141V1, multiclass
        clus
vv       GABRA6 MUTATED GABRA6 WILD-TYPE
  CLUS_1              1               77
  CLUS_2              0               41
  CLUS_3              6               58
  CLUS_4              2               55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GABRA6 MUTATED        1      1      3      4
  GABRA6 WILD-TYPE     62     49     45     75
D141V2, multiclass
        clus
vv       GABRA6 MUTATED GABRA6 WILD-TYPE
  CLUS_1              1               62
  CLUS_2              1               49
  CLUS_3              3               45
  CLUS_4              4               75
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GABRA6 MUTATED        5      4      2      0
  GABRA6 WILD-TYPE     65     94     42     63
D141V3, multiclass
        clus
vv       GABRA6 MUTATED GABRA6 WILD-TYPE
  CLUS_1              5               65
  CLUS_2              4               94
  CLUS_3              2               42
  CLUS_4              0               63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GABRA6 MUTATED        3      2      6
  GABRA6 WILD-TYPE    135     59     70
D141V4, multiclass
        clus
vv       GABRA6 MUTATED GABRA6 WILD-TYPE
  CLUS_1              3              135
  CLUS_2              2               59
  CLUS_3              6               70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GABRA6 MUTATED       13      2      0
  GABRA6 WILD-TYPE    279    430     62
D141V5, multiclass
        clus
vv       GABRA6 MUTATED GABRA6 WILD-TYPE
  CLUS_1             13              279
  CLUS_2              2              430
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GABRA6 MUTATED        7      2      1      0
  GABRA6 WILD-TYPE    146    221     87    161
D141V6, multiclass
        clus
vv       GABRA6 MUTATED GABRA6 WILD-TYPE
  CLUS_1              7              146
  CLUS_2              2              221
  CLUS_3              1               87
  CLUS_4              0              161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GABRA6 MUTATED        2      3      3      2
  GABRA6 WILD-TYPE    183    152    135     93
D141V7, multiclass
        clus
vv       GABRA6 MUTATED GABRA6 WILD-TYPE
  CLUS_1              2              183
  CLUS_2              3              152
  CLUS_3              3              135
  CLUS_4              2               93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GABRA6 MUTATED        3      4      3
  GABRA6 WILD-TYPE    202    216    145
D141V8, multiclass
        clus
vv       GABRA6 MUTATED GABRA6 WILD-TYPE
  CLUS_1              3              202
  CLUS_2              4              216
  CLUS_3              3              145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GABRA6 MUTATED        9      2      0
  GABRA6 WILD-TYPE    229    189    228
D141V9, multiclass
        clus
vv       GABRA6 MUTATED GABRA6 WILD-TYPE
  CLUS_1              9              229
  CLUS_2              2              189
  CLUS_3              0              228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GABRA6 MUTATED        7      2      2
  GABRA6 WILD-TYPE    189    189    268
D141V10, multiclass
        clus
vv       GABRA6 MUTATED GABRA6 WILD-TYPE
  CLUS_1              7              189
  CLUS_2              2              189
  CLUS_3              2              268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GABRA6 MUTATED        1      2      0      1
  GABRA6 WILD-TYPE    139    105     83    181
D141V11, multiclass
        clus
vv       GABRA6 MUTATED GABRA6 WILD-TYPE
  CLUS_1              1              139
  CLUS_2              2              105
  CLUS_3              0               83
  CLUS_4              1              181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GABRA6 MUTATED        0      1      3
  GABRA6 WILD-TYPE    223    185    100
D141V12, multiclass
        clus
vv       GABRA6 MUTATED GABRA6 WILD-TYPE
  CLUS_1              0              223
  CLUS_2              1              185
  CLUS_3              3              100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GABRA6 MUTATED        1      1      0      2
  GABRA6 WILD-TYPE    126    118    106    154
D141V13, multiclass
        clus
vv       GABRA6 MUTATED GABRA6 WILD-TYPE
  CLUS_1              1              126
  CLUS_2              1              118
  CLUS_3              0              106
  CLUS_4              2              154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  GABRA6 MUTATED        0      1      1      0      1      1
  GABRA6 WILD-TYPE     99     76    119     57     62     91
D141V14, multiclass
        clus
vv       GABRA6 MUTATED GABRA6 WILD-TYPE
  CLUS_1              0               99
  CLUS_2              1               76
  CLUS_3              1              119
  CLUS_4              0               57
  CLUS_5              1               62
  CLUS_6              1               91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(142) Variable = ALPK3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ALPK3 MUTATED        2      0      0      0
  ALPK3 WILD-TYPE     76     41     64     57
D142V1, multiclass
[1] "Remove cluster labels:" "ALPK3 MUTATED"         
clus
  ALPK3 MUTATED ALPK3 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0154      TCGA-06-0155      TCGA-06-0157      TCGA-06-0158 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0166      TCGA-06-0167      TCGA-06-0168      TCGA-06-0169 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3915 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ALPK3 MUTATED        1      0      0      1
  ALPK3 WILD-TYPE     62     50     48     78
D142V2, multiclass
[1] "Remove cluster labels:" "ALPK3 MUTATED"         
clus
  ALPK3 MUTATED ALPK3 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0154      TCGA-06-0155      TCGA-06-0157      TCGA-06-0158 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0166      TCGA-06-0167      TCGA-06-0168      TCGA-06-0169 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3915 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ALPK3 MUTATED        0      1      0      1
  ALPK3 WILD-TYPE     70     97     44     62
D142V3, multiclass
[1] "Remove cluster labels:" "ALPK3 MUTATED"         
clus
  ALPK3 MUTATED ALPK3 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0168      TCGA-06-0169 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-1806 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-12-0616      TCGA-12-0618      TCGA-12-0619      TCGA-12-0688 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-12-0692      TCGA-12-0821      TCGA-12-1597      TCGA-12-3649 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-12-5299      TCGA-12-5301      TCGA-14-0740      TCGA-14-0781 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-87-5896 
"ALPK3 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ALPK3 MUTATED        0      1      1
  ALPK3 WILD-TYPE    138     60     75
D142V4, multiclass
[1] "Remove cluster labels:" "ALPK3 MUTATED"         
clus
  ALPK3 MUTATED ALPK3 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0168      TCGA-06-0169 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0173      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-1806 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-12-0616      TCGA-12-0618      TCGA-12-0619      TCGA-12-0688 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-12-0692      TCGA-12-0821      TCGA-12-1597      TCGA-12-3649 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-12-5299      TCGA-12-5301      TCGA-14-0740      TCGA-14-0781 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3915      TCGA-41-4097      TCGA-41-5651 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-41-6646      TCGA-74-6573      TCGA-74-6575      TCGA-74-6577 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-74-6578      TCGA-74-6584      TCGA-76-4925      TCGA-76-4926 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6280      TCGA-76-6282 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-76-6283      TCGA-76-6285      TCGA-76-6286      TCGA-76-6656 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-81-5911 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-87-5896 
"ALPK3 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ALPK3 MUTATED        3      1      0
  ALPK3 WILD-TYPE    289    431     62
D142V5, multiclass
        clus
vv       ALPK3 MUTATED ALPK3 WILD-TYPE
  CLUS_1             3             289
  CLUS_2             1             431
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ALPK3 MUTATED        3      0      0      0
  ALPK3 WILD-TYPE    150    223     88    161
D142V6, multiclass
        clus
vv       ALPK3 MUTATED ALPK3 WILD-TYPE
  CLUS_1             3             150
  CLUS_2             0             223
  CLUS_3             0              88
  CLUS_4             0             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ALPK3 MUTATED        2      1      0      0
  ALPK3 WILD-TYPE    183    154    138     95
D142V7, multiclass
        clus
vv       ALPK3 MUTATED ALPK3 WILD-TYPE
  CLUS_1             2             183
  CLUS_2             1             154
  CLUS_3             0             138
  CLUS_4             0              95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ALPK3 MUTATED        1      1      1
  ALPK3 WILD-TYPE    204    219    147
D142V8, multiclass
        clus
vv       ALPK3 MUTATED ALPK3 WILD-TYPE
  CLUS_1             1             204
  CLUS_2             1             219
  CLUS_3             1             147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ALPK3 MUTATED        1      1      0
  ALPK3 WILD-TYPE    237    190    228
D142V9, multiclass
[1] "Remove cluster labels:" "ALPK3 MUTATED"         
clus
  ALPK3 MUTATED ALPK3 WILD-TYPE 
              2             655 
     TCGA-02-0047      TCGA-02-0055      TCGA-02-2483      TCGA-02-2485 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-02-2486      TCGA-06-0129      TCGA-06-0130      TCGA-06-0132 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0157      TCGA-06-0158      TCGA-06-0168 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0174      TCGA-06-0178      TCGA-06-0184      TCGA-06-0219 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0238      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0649      TCGA-06-0686      TCGA-06-0743      TCGA-06-0744 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0745      TCGA-06-0747      TCGA-06-0749      TCGA-06-0750 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0882      TCGA-06-1804      TCGA-06-2557 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-08-0386      TCGA-12-0616 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0821      TCGA-12-1597 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-12-5299      TCGA-14-0781      TCGA-14-0787      TCGA-14-0789 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0817      TCGA-14-1823      TCGA-14-1825 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-15-0742      TCGA-15-1444 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-1045      TCGA-19-1390      TCGA-19-2619 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1834 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1837      TCGA-27-2519      TCGA-27-2521 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2528 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2499      TCGA-28-2509 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-2510      TCGA-28-2513      TCGA-28-2514      TCGA-28-5204 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5213 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5220 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1980      TCGA-32-1982      TCGA-32-2615 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4213 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-3915 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-76-4932      TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-5394      TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-6666      TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-6670      TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-5275      TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-5279      TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A4XA      TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A4XE      TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A64L      TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A64R      TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A64W      TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A75M      TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-5874      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014      TCGA-DU-7015 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-A4DS      TCGA-HT-A4DV 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A74J      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6      TCGA-P5-A72U 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A736 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX      TCGA-QH-A6CY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ALPK3 MUTATED        0      1      1
  ALPK3 WILD-TYPE    196    190    269
D142V10, multiclass
[1] "Remove cluster labels:" "ALPK3 MUTATED"         
clus
  ALPK3 MUTATED ALPK3 WILD-TYPE 
              2             655 
     TCGA-02-0047      TCGA-02-0055      TCGA-02-2483      TCGA-02-2485 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-02-2486      TCGA-06-0129      TCGA-06-0130      TCGA-06-0132 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0157      TCGA-06-0158      TCGA-06-0168 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0174      TCGA-06-0178      TCGA-06-0184      TCGA-06-0219 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0238      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0649      TCGA-06-0686      TCGA-06-0743      TCGA-06-0744 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0745      TCGA-06-0747      TCGA-06-0749      TCGA-06-0750 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0882      TCGA-06-1804      TCGA-06-2557 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-08-0386      TCGA-12-0616 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0821      TCGA-12-1597 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-12-5299      TCGA-14-0781      TCGA-14-0787      TCGA-14-0789 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0817      TCGA-14-1823      TCGA-14-1825 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-15-0742      TCGA-15-1444 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-1045      TCGA-19-1390      TCGA-19-2619 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1834 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-1835      TCGA-27-1837      TCGA-27-2519      TCGA-27-2521 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2528 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2499      TCGA-28-2509 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-2510      TCGA-28-2513      TCGA-28-2514      TCGA-28-5204 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-5207      TCGA-28-5208      TCGA-28-5209      TCGA-28-5213 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-28-5215      TCGA-28-5216      TCGA-28-5218      TCGA-28-5220 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1980      TCGA-32-1982      TCGA-32-2615 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4213 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-3915 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-76-4932      TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-5394      TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-6666      TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-6670      TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-5275      TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-5279      TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A4XA      TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A4XE      TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A64L      TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A64R      TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A64W      TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A75M      TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-5874      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014      TCGA-DU-7015 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-A4DS      TCGA-HT-A4DV 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A74J      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6      TCGA-P5-A72U 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A736 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX      TCGA-QH-A6CY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ALPK3 MUTATED        0      1      0      1
  ALPK3 WILD-TYPE    140    106     83    181
D142V11, multiclass
[1] "Remove cluster labels:" "ALPK3 MUTATED"         
clus
  ALPK3 MUTATED ALPK3 WILD-TYPE 
              2             510 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-A4DS 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6      TCGA-P5-A72U 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A736 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY      TCGA-QH-A6CZ 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X      TCGA-RY-A83Y 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843      TCGA-RY-A845 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU      TCGA-S9-A6TV 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6TZ 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2      TCGA-S9-A6U5 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9      TCGA-S9-A6UA 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4      TCGA-TM-A7C5 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B      TCGA-TM-A84C 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H      TCGA-TM-A84I 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M      TCGA-TM-A84O 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TM-A84T 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH      TCGA-TQ-A7RI 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM      TCGA-TQ-A7RN 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ      TCGA-TQ-A7RR 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CF 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K      TCGA-WY-A858 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B      TCGA-WY-A85C 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-WY-A85D      TCGA-WY-A85E 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ALPK3 MUTATED        0      0      2
  ALPK3 WILD-TYPE    223    186    101
D142V12, multiclass
[1] "Remove cluster labels:" "ALPK3 MUTATED"         
clus
  ALPK3 MUTATED ALPK3 WILD-TYPE 
              2             510 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YI      TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YY      TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7Z6      TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-5962      TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-6688      TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-6692      TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A60J      TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A6J1      TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A710      TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A87Q      TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-A4DS 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6      TCGA-P5-A72U 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A736 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY      TCGA-QH-A6CZ 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X      TCGA-RY-A83Y 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843      TCGA-RY-A845 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU      TCGA-S9-A6TV 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6TZ 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2      TCGA-S9-A6U5 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9      TCGA-S9-A6UA 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4      TCGA-TM-A7C5 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B      TCGA-TM-A84C 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H      TCGA-TM-A84I 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M      TCGA-TM-A84O 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TM-A84T 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH      TCGA-TQ-A7RI 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM      TCGA-TQ-A7RN 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ      TCGA-TQ-A7RR 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CF 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K      TCGA-WY-A858 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B      TCGA-WY-A85C 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-WY-A85D      TCGA-WY-A85E 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ALPK3 MUTATED        0      0      0      2
  ALPK3 WILD-TYPE    127    119    106    154
D142V13, multiclass
[1] "Remove cluster labels:" "ALPK3 MUTATED"         
clus
  ALPK3 MUTATED ALPK3 WILD-TYPE 
              2             506 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393      TCGA-DU-6394 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014      TCGA-DU-7015 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-A4DS      TCGA-HT-A4DV 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6UA 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4      TCGA-TM-A7C5 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B      TCGA-TM-A84C 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H      TCGA-TM-A84I 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M      TCGA-TM-A84O 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TM-A84T 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH      TCGA-TQ-A7RI 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM      TCGA-TQ-A7RN 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ      TCGA-TQ-A7RR 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CF 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K      TCGA-WY-A858 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B      TCGA-WY-A85C 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-WY-A85D      TCGA-WY-A85E 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  ALPK3 MUTATED        0      0      0      0      1      1
  ALPK3 WILD-TYPE     99     77    120     57     62     91
D142V14, multiclass
[1] "Remove cluster labels:" "ALPK3 MUTATED"         
clus
  ALPK3 MUTATED ALPK3 WILD-TYPE 
              2             506 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393      TCGA-DU-6394 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014      TCGA-DU-7015 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-A4DS      TCGA-HT-A4DV 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6UA 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4      TCGA-TM-A7C5 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B      TCGA-TM-A84C 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H      TCGA-TM-A84I 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M      TCGA-TM-A84O 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TM-A84T 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH      TCGA-TQ-A7RI 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM      TCGA-TQ-A7RN 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ      TCGA-TQ-A7RR 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CF 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K      TCGA-WY-A858 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B      TCGA-WY-A85C 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 
     TCGA-WY-A85D      TCGA-WY-A85E 
"ALPK3 WILD-TYPE" "ALPK3 WILD-TYPE" 

Clustering(143) Variable = MYO1B MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO1B MUTATED        1      1      1      3
  MYO1B WILD-TYPE     77     40     63     54
D143V1, multiclass
        clus
vv       MYO1B MUTATED MYO1B WILD-TYPE
  CLUS_1             1              77
  CLUS_2             1              40
  CLUS_3             1              63
  CLUS_4             3              54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO1B MUTATED        2      1      0      3
  MYO1B WILD-TYPE     61     49     48     76
D143V2, multiclass
        clus
vv       MYO1B MUTATED MYO1B WILD-TYPE
  CLUS_1             2              61
  CLUS_2             1              49
  CLUS_3             0              48
  CLUS_4             3              76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO1B MUTATED        3      2      2      0
  MYO1B WILD-TYPE     67     96     42     63
D143V3, multiclass
        clus
vv       MYO1B MUTATED MYO1B WILD-TYPE
  CLUS_1             3              67
  CLUS_2             2              96
  CLUS_3             2              42
  CLUS_4             0              63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO1B MUTATED        2      2      3
  MYO1B WILD-TYPE    136     59     73
D143V4, multiclass
        clus
vv       MYO1B MUTATED MYO1B WILD-TYPE
  CLUS_1             2             136
  CLUS_2             2              59
  CLUS_3             3              73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO1B MUTATED        7      2      1
  MYO1B WILD-TYPE    285    430     61
D143V5, multiclass
        clus
vv       MYO1B MUTATED MYO1B WILD-TYPE
  CLUS_1             7             285
  CLUS_2             2             430
  CLUS_3             1              61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO1B MUTATED        3      2      0      1
  MYO1B WILD-TYPE    150    221     88    160
D143V6, multiclass
        clus
vv       MYO1B MUTATED MYO1B WILD-TYPE
  CLUS_1             3             150
  CLUS_2             2             221
  CLUS_3             0              88
  CLUS_4             1             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO1B MUTATED        2      4      2      0
  MYO1B WILD-TYPE    183    151    136     95
D143V7, multiclass
        clus
vv       MYO1B MUTATED MYO1B WILD-TYPE
  CLUS_1             2             183
  CLUS_2             4             151
  CLUS_3             2             136
  CLUS_4             0              95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO1B MUTATED        2      2      4
  MYO1B WILD-TYPE    203    218    144
D143V8, multiclass
        clus
vv       MYO1B MUTATED MYO1B WILD-TYPE
  CLUS_1             2             203
  CLUS_2             2             218
  CLUS_3             4             144
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO1B MUTATED        5      3      0
  MYO1B WILD-TYPE    233    188    228
D143V9, multiclass
        clus
vv       MYO1B MUTATED MYO1B WILD-TYPE
  CLUS_1             5             233
  CLUS_2             3             188
  CLUS_3             0             228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO1B MUTATED        5      1      2
  MYO1B WILD-TYPE    191    190    268
D143V10, multiclass
        clus
vv       MYO1B MUTATED MYO1B WILD-TYPE
  CLUS_1             5             191
  CLUS_2             1             190
  CLUS_3             2             268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO1B MUTATED        1      0      0      3
  MYO1B WILD-TYPE    139    107     83    179
D143V11, multiclass
        clus
vv       MYO1B MUTATED MYO1B WILD-TYPE
  CLUS_1             1             139
  CLUS_2             0             107
  CLUS_3             0              83
  CLUS_4             3             179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO1B MUTATED        1      2      1
  MYO1B WILD-TYPE    222    184    102
D143V12, multiclass
        clus
vv       MYO1B MUTATED MYO1B WILD-TYPE
  CLUS_1             1             222
  CLUS_2             2             184
  CLUS_3             1             102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO1B MUTATED        0      1      0      3
  MYO1B WILD-TYPE    127    118    106    153
D143V13, multiclass
        clus
vv       MYO1B MUTATED MYO1B WILD-TYPE
  CLUS_1             0             127
  CLUS_2             1             118
  CLUS_3             0             106
  CLUS_4             3             153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  MYO1B MUTATED        0      1      2      0      1      0
  MYO1B WILD-TYPE     99     76    118     57     62     92
D143V14, multiclass
        clus
vv       MYO1B MUTATED MYO1B WILD-TYPE
  CLUS_1             0              99
  CLUS_2             1              76
  CLUS_3             2             118
  CLUS_4             0              57
  CLUS_5             1              62
  CLUS_6             0              92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(144) Variable = SMOC1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMOC1 MUTATED        0      0      1      0
  SMOC1 WILD-TYPE     78     41     63     57
D144V1, multiclass
[1] "Remove cluster labels:" "SMOC1 MUTATED"         
clus
  SMOC1 MUTATED SMOC1 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0789 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMOC1 MUTATED        0      0      1      0
  SMOC1 WILD-TYPE     63     50     47     79
D144V2, multiclass
[1] "Remove cluster labels:" "SMOC1 MUTATED"         
clus
  SMOC1 MUTATED SMOC1 WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0789 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMOC1 MUTATED        0      1      0      0
  SMOC1 WILD-TYPE     70     97     44     63
D144V3, multiclass
[1] "Remove cluster labels:" "SMOC1 MUTATED"         
clus
  SMOC1 MUTATED SMOC1 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0789      TCGA-14-0790 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMOC1 MUTATED        0      0      1
  SMOC1 WILD-TYPE    138     61     75
D144V4, multiclass
[1] "Remove cluster labels:" "SMOC1 MUTATED"         
clus
  SMOC1 MUTATED SMOC1 WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0789      TCGA-14-0790 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMOC1 MUTATED        1      3      0
  SMOC1 WILD-TYPE    291    429     62
D144V5, multiclass
        clus
vv       SMOC1 MUTATED SMOC1 WILD-TYPE
  CLUS_1             1             291
  CLUS_2             3             429
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMOC1 MUTATED        0      2      1      0
  SMOC1 WILD-TYPE    153    221     87    161
D144V6, multiclass
        clus
vv       SMOC1 MUTATED SMOC1 WILD-TYPE
  CLUS_1             0             153
  CLUS_2             2             221
  CLUS_3             1              87
  CLUS_4             0             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMOC1 MUTATED        1      1      0      0
  SMOC1 WILD-TYPE    184    154    138     95
D144V7, multiclass
[1] "Remove cluster labels:" "SMOC1 MUTATED"         
clus
  SMOC1 MUTATED SMOC1 WILD-TYPE 
              2             571 
     TCGA-02-0003      TCGA-02-2470      TCGA-02-2485      TCGA-06-0126 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0128      TCGA-06-0129      TCGA-06-0130      TCGA-06-0154 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0155      TCGA-06-0189      TCGA-06-0238      TCGA-06-0644 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0650      TCGA-06-0875      TCGA-06-0876      TCGA-06-0877 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0879      TCGA-06-0882      TCGA-06-0939 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-1804      TCGA-06-1806      TCGA-06-2557      TCGA-06-2558 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2559      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2570      TCGA-06-5408 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-0692      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5301 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0862      TCGA-14-0871      TCGA-14-1823 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-16-0846      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2625      TCGA-19-2631      TCGA-19-4068 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-5953      TCGA-19-5954      TCGA-19-5955      TCGA-19-5958 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-5959      TCGA-19-5960      TCGA-26-1442      TCGA-26-5132 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-6173      TCGA-26-6174 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1836      TCGA-27-2518      TCGA-27-2528 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2501      TCGA-28-5208 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-5214      TCGA-32-1970      TCGA-32-1982      TCGA-32-1986 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-4210      TCGA-32-4211      TCGA-32-5222 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-41-6646 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-74-6573      TCGA-74-6575      TCGA-74-6577      TCGA-74-6578 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-74-6584      TCGA-76-4926      TCGA-76-4927      TCGA-76-4928 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-4929      TCGA-76-4931      TCGA-76-4932      TCGA-76-6192 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6193      TCGA-76-6282      TCGA-76-6283      TCGA-76-6285 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-CS-4938      TCGA-CS-4942      TCGA-CS-4943      TCGA-CS-5390 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-CS-5393      TCGA-CS-5394      TCGA-CS-5396      TCGA-CS-5397 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6665      TCGA-CS-6666 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5280 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M      TCGA-DB-A75O 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A66B      TCGA-DH-A66D 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7US      TCGA-DU-5847 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7011      TCGA-DU-7012      TCGA-DU-7013 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-7014      TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7TA      TCGA-DU-A7TB 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YQ 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z6      TCGA-EZ-7264 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-7634      TCGA-FG-7636 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60L      TCGA-FG-A6IZ 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-HT-7467 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7476 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8109 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8564      TCGA-HT-A4DV      TCGA-HT-A5R5 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RB      TCGA-HT-A614 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A74H 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-A74J      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65S      TCGA-QH-A65V 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX      TCGA-QH-A6CY 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-R8-A6YH      TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-S9-A6TS      TCGA-S9-A6TU 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6U0 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-S9-A6U1      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U9 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-S9-A7IS      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7QX      TCGA-S9-A7QZ 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-S9-A7R1      TCGA-S9-A7R4      TCGA-S9-A7R8      TCGA-TM-A7C5 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RK      TCGA-TQ-A7RN      TCGA-TQ-A7RQ 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CH 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-W9-A837 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMOC1 MUTATED        0      1      1
  SMOC1 WILD-TYPE    205    219    147
D144V8, multiclass
[1] "Remove cluster labels:" "SMOC1 MUTATED"         
clus
  SMOC1 MUTATED SMOC1 WILD-TYPE 
              2             571 
     TCGA-02-0003      TCGA-02-2470      TCGA-02-2485      TCGA-06-0126 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0128      TCGA-06-0129      TCGA-06-0130      TCGA-06-0154 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0155      TCGA-06-0189      TCGA-06-0238      TCGA-06-0644 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0650      TCGA-06-0875      TCGA-06-0876      TCGA-06-0877 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0879      TCGA-06-0882      TCGA-06-0939 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-1804      TCGA-06-1806      TCGA-06-2557      TCGA-06-2558 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2559      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2570      TCGA-06-5408 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-0692      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5301 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0862      TCGA-14-0871      TCGA-14-1823 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-16-0846      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2625      TCGA-19-2631      TCGA-19-4068 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-5953      TCGA-19-5954      TCGA-19-5955      TCGA-19-5958 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-19-5959      TCGA-19-5960      TCGA-26-1442      TCGA-26-5132 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-26-5133      TCGA-26-5134      TCGA-26-6173      TCGA-26-6174 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1836      TCGA-27-2518      TCGA-27-2528 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-1747      TCGA-28-1753      TCGA-28-2501      TCGA-28-5208 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-28-5214      TCGA-32-1970      TCGA-32-1982      TCGA-32-1986 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-32-1991      TCGA-32-4210      TCGA-32-4211      TCGA-32-5222 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-41-6646 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-74-6573      TCGA-74-6575      TCGA-74-6577      TCGA-74-6578 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-74-6584      TCGA-76-4926      TCGA-76-4927      TCGA-76-4928 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-4929      TCGA-76-4931      TCGA-76-4932      TCGA-76-6192 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6193      TCGA-76-6282      TCGA-76-6283      TCGA-76-6285 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-CS-4938      TCGA-CS-4942      TCGA-CS-4943      TCGA-CS-5390 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-CS-5393      TCGA-CS-5394      TCGA-CS-5396      TCGA-CS-5397 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6665      TCGA-CS-6666 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5280 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M      TCGA-DB-A75O 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A66B      TCGA-DH-A66D 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7US      TCGA-DU-5847 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7011      TCGA-DU-7012      TCGA-DU-7013 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-7014      TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7TA      TCGA-DU-A7TB 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YQ 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z6      TCGA-EZ-7264 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-7634      TCGA-FG-7636 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60L      TCGA-FG-A6IZ 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-HT-7467 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7476 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8109 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8564      TCGA-HT-A4DV      TCGA-HT-A5R5 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RB      TCGA-HT-A614 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A74H 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HT-A74J      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65S      TCGA-QH-A65V 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX      TCGA-QH-A6CY 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-R8-A6YH      TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-S9-A6TS      TCGA-S9-A6TU 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6U0 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-S9-A6U1      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U9 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-S9-A7IS      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7QX      TCGA-S9-A7QZ 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-S9-A7R1      TCGA-S9-A7R4      TCGA-S9-A7R8      TCGA-TM-A7C5 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RK      TCGA-TQ-A7RN      TCGA-TQ-A7RQ 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CH 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-W9-A837 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D 
"SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" "SMOC1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMOC1 MUTATED        1      1      2
  SMOC1 WILD-TYPE    237    190    226
D144V9, multiclass
        clus
vv       SMOC1 MUTATED SMOC1 WILD-TYPE
  CLUS_1             1             237
  CLUS_2             1             190
  CLUS_3             2             226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMOC1 MUTATED        1      2      1
  SMOC1 WILD-TYPE    195    189    269
D144V10, multiclass
        clus
vv       SMOC1 MUTATED SMOC1 WILD-TYPE
  CLUS_1             1             195
  CLUS_2             2             189
  CLUS_3             1             269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMOC1 MUTATED        2      0      0      1
  SMOC1 WILD-TYPE    138    107     83    181
D144V11, multiclass
        clus
vv       SMOC1 MUTATED SMOC1 WILD-TYPE
  CLUS_1             2             138
  CLUS_2             0             107
  CLUS_3             0              83
  CLUS_4             1             181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMOC1 MUTATED        2      1      0
  SMOC1 WILD-TYPE    221    185    103
D144V12, multiclass
        clus
vv       SMOC1 MUTATED SMOC1 WILD-TYPE
  CLUS_1             2             221
  CLUS_2             1             185
  CLUS_3             0             103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMOC1 MUTATED        0      2      0      1
  SMOC1 WILD-TYPE    127    117    106    155
D144V13, multiclass
        clus
vv       SMOC1 MUTATED SMOC1 WILD-TYPE
  CLUS_1             0             127
  CLUS_2             2             117
  CLUS_3             0             106
  CLUS_4             1             155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  SMOC1 MUTATED        2      0      1      0      0      0
  SMOC1 WILD-TYPE     97     77    119     57     63     92
D144V14, multiclass
        clus
vv       SMOC1 MUTATED SMOC1 WILD-TYPE
  CLUS_1             2              97
  CLUS_2             0              77
  CLUS_3             1             119
  CLUS_4             0              57
  CLUS_5             0              63
  CLUS_6             0              92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(145) Variable = ACSM1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACSM1 MUTATED        0      1      1      0
  ACSM1 WILD-TYPE     78     40     63     57
D145V1, multiclass
[1] "Remove cluster labels:" "ACSM1 MUTATED"         
clus
  ACSM1 MUTATED ACSM1 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-76-6285      TCGA-87-5896 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACSM1 MUTATED        0      0      1      1
  ACSM1 WILD-TYPE     63     50     47     78
D145V2, multiclass
[1] "Remove cluster labels:" "ACSM1 MUTATED"         
clus
  ACSM1 MUTATED ACSM1 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-2557 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-76-6285      TCGA-87-5896 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACSM1 MUTATED        0      1      0      1
  ACSM1 WILD-TYPE     70     97     44     62
D145V3, multiclass
[1] "Remove cluster labels:" "ACSM1 MUTATED"         
clus
  ACSM1 MUTATED ACSM1 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-1806 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-12-0616      TCGA-12-0618      TCGA-12-0619      TCGA-12-0688 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-12-0692      TCGA-12-0821      TCGA-12-1597      TCGA-12-3649 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-12-5299      TCGA-12-5301      TCGA-14-0740      TCGA-14-0781 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5911 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-87-5896 
"ACSM1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACSM1 MUTATED        1      1      0
  ACSM1 WILD-TYPE    137     60     76
D145V4, multiclass
[1] "Remove cluster labels:" "ACSM1 MUTATED"         
clus
  ACSM1 MUTATED ACSM1 WILD-TYPE 
              2             273 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0174      TCGA-06-0178      TCGA-06-0184 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0185      TCGA-06-0188      TCGA-06-0189      TCGA-06-0192 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0195      TCGA-06-0213      TCGA-06-0214      TCGA-06-0216 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0219      TCGA-06-0237      TCGA-06-0238      TCGA-06-0240 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0241      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0648      TCGA-06-0649      TCGA-06-0650      TCGA-06-0686 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0743      TCGA-06-0744      TCGA-06-0745      TCGA-06-0747 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0749      TCGA-06-0750      TCGA-06-0875      TCGA-06-0876 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0877      TCGA-06-0878      TCGA-06-0879      TCGA-06-0881 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-0882      TCGA-06-0939      TCGA-06-1804      TCGA-06-1806 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-12-0616      TCGA-12-0618      TCGA-12-0619      TCGA-12-0688 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-12-0692      TCGA-12-0821      TCGA-12-1597      TCGA-12-3649 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-12-5299      TCGA-12-5301      TCGA-14-0740      TCGA-14-0781 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-14-0786      TCGA-14-0787      TCGA-14-0789      TCGA-14-0790 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0817      TCGA-14-0862      TCGA-14-0871 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-14-1043      TCGA-14-1395      TCGA-14-1450      TCGA-14-1456 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-14-1823      TCGA-14-1825      TCGA-14-1829      TCGA-14-2554 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-14-3476      TCGA-14-4157      TCGA-15-0742      TCGA-15-1444 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-16-0846      TCGA-16-0861      TCGA-16-1045      TCGA-16-1048 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-19-1390      TCGA-19-1790      TCGA-19-2619      TCGA-19-2620 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-19-2623      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-19-2631      TCGA-19-4068      TCGA-19-5947      TCGA-19-5950 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5911 
"ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" "ACSM1 WILD-TYPE" 
     TCGA-87-5896 
"ACSM1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACSM1 MUTATED        4      2      1
  ACSM1 WILD-TYPE    288    430     61
D145V5, multiclass
        clus
vv       ACSM1 MUTATED ACSM1 WILD-TYPE
  CLUS_1             4             288
  CLUS_2             2             430
  CLUS_3             1              61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACSM1 MUTATED        3      3      0      0
  ACSM1 WILD-TYPE    150    220     88    161
D145V6, multiclass
        clus
vv       ACSM1 MUTATED ACSM1 WILD-TYPE
  CLUS_1             3             150
  CLUS_2             3             220
  CLUS_3             0              88
  CLUS_4             0             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACSM1 MUTATED        1      1      2      0
  ACSM1 WILD-TYPE    184    154    136     95
D145V7, multiclass
        clus
vv       ACSM1 MUTATED ACSM1 WILD-TYPE
  CLUS_1             1             184
  CLUS_2             1             154
  CLUS_3             2             136
  CLUS_4             0              95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACSM1 MUTATED        3      0      1
  ACSM1 WILD-TYPE    202    220    147
D145V8, multiclass
        clus
vv       ACSM1 MUTATED ACSM1 WILD-TYPE
  CLUS_1             3             202
  CLUS_2             0             220
  CLUS_3             1             147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACSM1 MUTATED        2      2      1
  ACSM1 WILD-TYPE    236    189    227
D145V9, multiclass
        clus
vv       ACSM1 MUTATED ACSM1 WILD-TYPE
  CLUS_1             2             236
  CLUS_2             2             189
  CLUS_3             1             227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACSM1 MUTATED        0      3      2
  ACSM1 WILD-TYPE    196    188    268
D145V10, multiclass
        clus
vv       ACSM1 MUTATED ACSM1 WILD-TYPE
  CLUS_1             0             196
  CLUS_2             3             188
  CLUS_3             2             268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACSM1 MUTATED        0      2      0      3
  ACSM1 WILD-TYPE    140    105     83    179
D145V11, multiclass
        clus
vv       ACSM1 MUTATED ACSM1 WILD-TYPE
  CLUS_1             0             140
  CLUS_2             2             105
  CLUS_3             0              83
  CLUS_4             3             179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACSM1 MUTATED        1      1      3
  ACSM1 WILD-TYPE    222    185    100
D145V12, multiclass
        clus
vv       ACSM1 MUTATED ACSM1 WILD-TYPE
  CLUS_1             1             222
  CLUS_2             1             185
  CLUS_3             3             100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACSM1 MUTATED        0      2      0      3
  ACSM1 WILD-TYPE    127    117    106    153
D145V13, multiclass
        clus
vv       ACSM1 MUTATED ACSM1 WILD-TYPE
  CLUS_1             0             127
  CLUS_2             2             117
  CLUS_3             0             106
  CLUS_4             3             153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  ACSM1 MUTATED        0      2      2      0      0      1
  ACSM1 WILD-TYPE     99     75    118     57     63     91
D145V14, multiclass
        clus
vv       ACSM1 MUTATED ACSM1 WILD-TYPE
  CLUS_1             0              99
  CLUS_2             2              75
  CLUS_3             2             118
  CLUS_4             0              57
  CLUS_5             0              63
  CLUS_6             1              91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(146) Variable = CIB1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIB1 MUTATED        0      0      1      0
  CIB1 WILD-TYPE     78     41     63     57
D146V1, multiclass
[1] "Remove cluster labels:" "CIB1 MUTATED"          
clus
  CIB1 MUTATED CIB1 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0781     TCGA-14-0786     TCGA-14-0787 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-0789     TCGA-14-0790     TCGA-14-0813     TCGA-14-0817 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1456     TCGA-14-1823     TCGA-14-1825 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-14-3476     TCGA-14-4157 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-15-0742     TCGA-15-1444     TCGA-16-0846     TCGA-16-0861 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-16-1045     TCGA-16-1048     TCGA-19-1390     TCGA-19-1790 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-2619     TCGA-19-2620     TCGA-19-2623     TCGA-19-2624 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-2625     TCGA-19-2629     TCGA-19-2631     TCGA-19-4068 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-5947     TCGA-19-5950     TCGA-19-5951     TCGA-19-5952 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIB1 MUTATED        0      0      1      0
  CIB1 WILD-TYPE     63     50     47     79
D146V2, multiclass
[1] "Remove cluster labels:" "CIB1 MUTATED"          
clus
  CIB1 MUTATED CIB1 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6389 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-08-0386     TCGA-12-0616 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0781     TCGA-14-0786     TCGA-14-0787 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-0789     TCGA-14-0790     TCGA-14-0813     TCGA-14-0817 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1456     TCGA-14-1823     TCGA-14-1825 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-1829     TCGA-14-2554     TCGA-14-3476     TCGA-14-4157 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-15-0742     TCGA-15-1444     TCGA-16-0846     TCGA-16-0861 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-16-1045     TCGA-16-1048     TCGA-19-1390     TCGA-19-1790 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-2619     TCGA-19-2620     TCGA-19-2623     TCGA-19-2624 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-2625     TCGA-19-2629     TCGA-19-2631     TCGA-19-4068 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-5947     TCGA-19-5950     TCGA-19-5951     TCGA-19-5952 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIB1 MUTATED        1      0      0      0
  CIB1 WILD-TYPE     69     98     44     63
D146V3, multiclass
[1] "Remove cluster labels:" "CIB1 MUTATED"          
clus
  CIB1 MUTATED CIB1 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5953 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CIB1 MUTATED        0      0      1
  CIB1 WILD-TYPE    138     61     75
D146V4, multiclass
[1] "Remove cluster labels:" "CIB1 MUTATED"          
clus
  CIB1 MUTATED CIB1 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0862 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-0871     TCGA-14-1043     TCGA-14-1395     TCGA-14-1450 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5953 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"CIB1 WILD-TYPE" "CIB1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CIB1 MUTATED        1      3      1
  CIB1 WILD-TYPE    291    429     61
D146V5, multiclass
        clus
vv       CIB1 MUTATED CIB1 WILD-TYPE
  CLUS_1            1            291
  CLUS_2            3            429
  CLUS_3            1             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIB1 MUTATED        1      2      0      2
  CIB1 WILD-TYPE    152    221     88    159
D146V6, multiclass
        clus
vv       CIB1 MUTATED CIB1 WILD-TYPE
  CLUS_1            1            152
  CLUS_2            2            221
  CLUS_3            0             88
  CLUS_4            2            159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIB1 MUTATED        2      1      2      0
  CIB1 WILD-TYPE    183    154    136     95
D146V7, multiclass
        clus
vv       CIB1 MUTATED CIB1 WILD-TYPE
  CLUS_1            2            183
  CLUS_2            1            154
  CLUS_3            2            136
  CLUS_4            0             95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CIB1 MUTATED        4      0      1
  CIB1 WILD-TYPE    201    220    147
D146V8, multiclass
        clus
vv       CIB1 MUTATED CIB1 WILD-TYPE
  CLUS_1            4            201
  CLUS_2            0            220
  CLUS_3            1            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CIB1 MUTATED        1      2      1
  CIB1 WILD-TYPE    237    189    227
D146V9, multiclass
        clus
vv       CIB1 MUTATED CIB1 WILD-TYPE
  CLUS_1            1            237
  CLUS_2            2            189
  CLUS_3            1            227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CIB1 MUTATED        0      1      3
  CIB1 WILD-TYPE    196    190    267
D146V10, multiclass
        clus
vv       CIB1 MUTATED CIB1 WILD-TYPE
  CLUS_1            0            196
  CLUS_2            1            190
  CLUS_3            3            267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIB1 MUTATED        0      1      2      1
  CIB1 WILD-TYPE    140    106     81    181
D146V11, multiclass
        clus
vv       CIB1 MUTATED CIB1 WILD-TYPE
  CLUS_1            0            140
  CLUS_2            1            106
  CLUS_3            2             81
  CLUS_4            1            181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CIB1 MUTATED        0      4      0
  CIB1 WILD-TYPE    223    182    103
D146V12, multiclass
        clus
vv       CIB1 MUTATED CIB1 WILD-TYPE
  CLUS_1            0            223
  CLUS_2            4            182
  CLUS_3            0            103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIB1 MUTATED        0      2      1      1
  CIB1 WILD-TYPE    127    117    105    155
D146V13, multiclass
        clus
vv       CIB1 MUTATED CIB1 WILD-TYPE
  CLUS_1            0            127
  CLUS_2            2            117
  CLUS_3            1            105
  CLUS_4            1            155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  CIB1 MUTATED        0      2      1      1      0      0
  CIB1 WILD-TYPE     99     75    119     56     63     92
D146V14, multiclass
        clus
vv       CIB1 MUTATED CIB1 WILD-TYPE
  CLUS_1            0             99
  CLUS_2            2             75
  CLUS_3            1            119
  CLUS_4            1             56
  CLUS_5            0             63
  CLUS_6            0             92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(147) Variable = CDA MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDA MUTATED        2      0      0      0
  CDA WILD-TYPE     76     41     64     57
D147V1, multiclass
[1] "Remove cluster labels:" "CDA MUTATED"           
clus
  CDA MUTATED CDA WILD-TYPE 
            2           238 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-2470    TCGA-02-2483 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124    TCGA-06-0126 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0132    TCGA-06-0137 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157    TCGA-06-0158 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0166    TCGA-06-0167    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-2557    TCGA-06-2558 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5859    TCGA-06-6389    TCGA-06-6390    TCGA-06-6391    TCGA-08-0386 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-12-0616    TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-12-0821    TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-12-3653    TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0781 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-0817    TCGA-14-0871    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-1829    TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-15-1444    TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-1390    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623    TCGA-19-2624 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068    TCGA-19-5947 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5954    TCGA-19-5955 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439    TCGA-26-1442 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135    TCGA-26-5136 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-26-5139    TCGA-27-1830    TCGA-27-1831    TCGA-27-1832    TCGA-27-1833 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-1834    TCGA-27-1835    TCGA-27-1836    TCGA-27-1837    TCGA-27-1838 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-2518    TCGA-27-2519    TCGA-27-2521    TCGA-27-2523    TCGA-27-2524 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-2526    TCGA-27-2527    TCGA-27-2528    TCGA-28-1747    TCGA-28-1753 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-2501    TCGA-28-2502    TCGA-28-2509    TCGA-28-2510    TCGA-28-2513 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-2514    TCGA-28-5204    TCGA-28-5207    TCGA-28-5208    TCGA-28-5209 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-5213    TCGA-28-5214    TCGA-28-5215    TCGA-28-5216    TCGA-28-5218 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-5219    TCGA-28-5220    TCGA-28-6450    TCGA-32-1970    TCGA-32-1977 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-1979    TCGA-32-1980    TCGA-32-1982    TCGA-32-1986    TCGA-32-1991 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-2491    TCGA-32-2494    TCGA-32-2495    TCGA-32-2615    TCGA-32-2632 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-2634    TCGA-32-2638    TCGA-32-4208    TCGA-32-4209    TCGA-32-4210 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-4211    TCGA-32-4719    TCGA-32-5222    TCGA-41-2571    TCGA-41-2572 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-41-2573    TCGA-41-2575    TCGA-41-3392    TCGA-41-3393    TCGA-41-3915 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-41-4097    TCGA-41-5651    TCGA-76-4925    TCGA-76-4926    TCGA-76-4927 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932    TCGA-76-4934 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193    TCGA-76-6282 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-6285    TCGA-81-5910    TCGA-87-5896 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDA MUTATED        1      0      0      1
  CDA WILD-TYPE     62     50     48     78
D147V2, multiclass
[1] "Remove cluster labels:" "CDA MUTATED"           
clus
  CDA MUTATED CDA WILD-TYPE 
            2           238 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-2470    TCGA-02-2483 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124    TCGA-06-0126 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0132    TCGA-06-0137 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157    TCGA-06-0158 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0166    TCGA-06-0167    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-2557    TCGA-06-2558 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5859    TCGA-06-6389    TCGA-06-6390    TCGA-06-6391    TCGA-08-0386 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-12-0616    TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-12-0821    TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-12-3653    TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0781 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-0817    TCGA-14-0871    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-1829    TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-15-1444    TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-1390    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623    TCGA-19-2624 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068    TCGA-19-5947 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5954    TCGA-19-5955 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439    TCGA-26-1442 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135    TCGA-26-5136 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-26-5139    TCGA-27-1830    TCGA-27-1831    TCGA-27-1832    TCGA-27-1833 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-1834    TCGA-27-1835    TCGA-27-1836    TCGA-27-1837    TCGA-27-1838 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-2518    TCGA-27-2519    TCGA-27-2521    TCGA-27-2523    TCGA-27-2524 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-2526    TCGA-27-2527    TCGA-27-2528    TCGA-28-1747    TCGA-28-1753 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-2501    TCGA-28-2502    TCGA-28-2509    TCGA-28-2510    TCGA-28-2513 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-2514    TCGA-28-5204    TCGA-28-5207    TCGA-28-5208    TCGA-28-5209 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-5213    TCGA-28-5214    TCGA-28-5215    TCGA-28-5216    TCGA-28-5218 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-5219    TCGA-28-5220    TCGA-28-6450    TCGA-32-1970    TCGA-32-1977 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-1979    TCGA-32-1980    TCGA-32-1982    TCGA-32-1986    TCGA-32-1991 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-2491    TCGA-32-2494    TCGA-32-2495    TCGA-32-2615    TCGA-32-2632 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-2634    TCGA-32-2638    TCGA-32-4208    TCGA-32-4209    TCGA-32-4210 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-4211    TCGA-32-4719    TCGA-32-5222    TCGA-41-2571    TCGA-41-2572 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-41-2573    TCGA-41-2575    TCGA-41-3392    TCGA-41-3393    TCGA-41-3915 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-41-4097    TCGA-41-5651    TCGA-76-4925    TCGA-76-4926    TCGA-76-4927 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932    TCGA-76-4934 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193    TCGA-76-6282 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-6285    TCGA-81-5910    TCGA-87-5896 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDA MUTATED        2      0      0      0
  CDA WILD-TYPE     68     98     44     63
D147V3, multiclass
[1] "Remove cluster labels:" "CDA MUTATED"           
clus
  CDA MUTATED CDA WILD-TYPE 
            2           273 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-0055    TCGA-02-2470 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-02-2483    TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0126    TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0137 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0151    TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0158    TCGA-06-0166    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-1806    TCGA-06-2557 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-2558    TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-2564    TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5408    TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5414    TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5858    TCGA-06-5859    TCGA-06-6388    TCGA-06-6389    TCGA-06-6390 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-6391    TCGA-06-6693    TCGA-06-6694    TCGA-06-6695    TCGA-06-6697 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-6698    TCGA-06-6699    TCGA-06-6700    TCGA-06-6701    TCGA-08-0386 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-12-0616    TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-12-0821    TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-12-3653    TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0740 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-0781    TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-0813    TCGA-14-0817    TCGA-14-0862    TCGA-14-0871    TCGA-14-1043 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-1395    TCGA-14-1450    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-1829    TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-15-1444    TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-1390    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623    TCGA-19-2624 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068    TCGA-19-5947 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5953    TCGA-19-5954 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-26-5136    TCGA-26-5139    TCGA-26-6173    TCGA-26-6174    TCGA-27-1830 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-1831    TCGA-27-1832    TCGA-27-1833    TCGA-27-1834    TCGA-27-1835 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-1836    TCGA-27-1837    TCGA-27-1838    TCGA-27-2518    TCGA-27-2519 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-2521    TCGA-27-2523    TCGA-27-2524    TCGA-27-2526    TCGA-27-2527 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-2528    TCGA-28-1747    TCGA-28-1753    TCGA-28-2502    TCGA-28-2509 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-2510    TCGA-28-2513    TCGA-28-2514    TCGA-28-5204    TCGA-28-5207 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-5208    TCGA-28-5209    TCGA-28-5211    TCGA-28-5213    TCGA-28-5214 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-5215    TCGA-28-5216    TCGA-28-5218    TCGA-28-5219    TCGA-28-5220 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-6450    TCGA-32-1970    TCGA-32-1977    TCGA-32-1979    TCGA-32-1980 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-1982    TCGA-32-1986    TCGA-32-1991    TCGA-32-2491    TCGA-32-2494 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-2495    TCGA-32-2615    TCGA-32-2632    TCGA-32-2634    TCGA-32-2638 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-4208    TCGA-32-4209    TCGA-32-4210    TCGA-32-4211    TCGA-32-4719 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-5222    TCGA-41-2571    TCGA-41-2572    TCGA-41-2573    TCGA-41-2575 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-41-3392    TCGA-41-3393    TCGA-41-3915    TCGA-41-4097    TCGA-41-5651 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-41-6646    TCGA-74-6573    TCGA-74-6575    TCGA-74-6577    TCGA-74-6578 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-74-6584    TCGA-76-4925    TCGA-76-4926    TCGA-76-4927    TCGA-76-4928 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-4929    TCGA-76-4931    TCGA-76-4932    TCGA-76-4934    TCGA-76-4935 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-6191    TCGA-76-6192    TCGA-76-6193    TCGA-76-6280    TCGA-76-6282 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-6283    TCGA-76-6285    TCGA-76-6286    TCGA-76-6656    TCGA-76-6657 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-6660    TCGA-76-6661    TCGA-76-6662    TCGA-76-6663    TCGA-76-6664 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-81-5910    TCGA-81-5911    TCGA-87-5896 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CDA MUTATED        0      1      1
  CDA WILD-TYPE    138     60     75
D147V4, multiclass
[1] "Remove cluster labels:" "CDA MUTATED"           
clus
  CDA MUTATED CDA WILD-TYPE 
            2           273 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-0055    TCGA-02-2470 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-02-2483    TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0126    TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0137 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0151    TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0158    TCGA-06-0166    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0745    TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0876    TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0882    TCGA-06-0939    TCGA-06-1804    TCGA-06-1806    TCGA-06-2557 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-2558    TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-2564    TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5408    TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5414    TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5858    TCGA-06-5859    TCGA-06-6388    TCGA-06-6389    TCGA-06-6390 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-6391    TCGA-06-6693    TCGA-06-6694    TCGA-06-6695    TCGA-06-6697 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-6698    TCGA-06-6699    TCGA-06-6700    TCGA-06-6701    TCGA-08-0386 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-12-0616    TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-12-0821    TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-12-3653    TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0740 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-0781    TCGA-14-0786    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-0813    TCGA-14-0817    TCGA-14-0862    TCGA-14-0871    TCGA-14-1043 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-1395    TCGA-14-1450    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-1829    TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-15-1444    TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-1390    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623    TCGA-19-2624 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068    TCGA-19-5947 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5953    TCGA-19-5954 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-26-5136    TCGA-26-5139    TCGA-26-6173    TCGA-26-6174    TCGA-27-1830 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-1831    TCGA-27-1832    TCGA-27-1833    TCGA-27-1834    TCGA-27-1835 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-1836    TCGA-27-1837    TCGA-27-1838    TCGA-27-2518    TCGA-27-2519 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-2521    TCGA-27-2523    TCGA-27-2524    TCGA-27-2526    TCGA-27-2527 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-2528    TCGA-28-1747    TCGA-28-1753    TCGA-28-2502    TCGA-28-2509 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-2510    TCGA-28-2513    TCGA-28-2514    TCGA-28-5204    TCGA-28-5207 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-5208    TCGA-28-5209    TCGA-28-5211    TCGA-28-5213    TCGA-28-5214 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-5215    TCGA-28-5216    TCGA-28-5218    TCGA-28-5219    TCGA-28-5220 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-6450    TCGA-32-1970    TCGA-32-1977    TCGA-32-1979    TCGA-32-1980 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-1982    TCGA-32-1986    TCGA-32-1991    TCGA-32-2491    TCGA-32-2494 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-2495    TCGA-32-2615    TCGA-32-2632    TCGA-32-2634    TCGA-32-2638 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-4208    TCGA-32-4209    TCGA-32-4210    TCGA-32-4211    TCGA-32-4719 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-5222    TCGA-41-2571    TCGA-41-2572    TCGA-41-2573    TCGA-41-2575 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-41-3392    TCGA-41-3393    TCGA-41-3915    TCGA-41-4097    TCGA-41-5651 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-41-6646    TCGA-74-6573    TCGA-74-6575    TCGA-74-6577    TCGA-74-6578 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-74-6584    TCGA-76-4925    TCGA-76-4926    TCGA-76-4927    TCGA-76-4928 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-4929    TCGA-76-4931    TCGA-76-4932    TCGA-76-4934    TCGA-76-4935 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-6191    TCGA-76-6192    TCGA-76-6193    TCGA-76-6280    TCGA-76-6282 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-6283    TCGA-76-6285    TCGA-76-6286    TCGA-76-6656    TCGA-76-6657 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-6660    TCGA-76-6661    TCGA-76-6662    TCGA-76-6663    TCGA-76-6664 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-81-5910    TCGA-81-5911    TCGA-87-5896 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CDA MUTATED        1      1      0
  CDA WILD-TYPE    291    431     62
D147V5, multiclass
[1] "Remove cluster labels:" "CDA MUTATED"           
clus
  CDA MUTATED CDA WILD-TYPE 
            2           784 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-0055    TCGA-02-2470 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-02-2483    TCGA-02-2485    TCGA-02-2486    TCGA-06-0119    TCGA-06-0122 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0124    TCGA-06-0126    TCGA-06-0128    TCGA-06-0129    TCGA-06-0130 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0132    TCGA-06-0137    TCGA-06-0139    TCGA-06-0140    TCGA-06-0141 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0142    TCGA-06-0145    TCGA-06-0151    TCGA-06-0152    TCGA-06-0154 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0155    TCGA-06-0157    TCGA-06-0158    TCGA-06-0165    TCGA-06-0166 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0168    TCGA-06-0169    TCGA-06-0173    TCGA-06-0174    TCGA-06-0178 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0184    TCGA-06-0185    TCGA-06-0188    TCGA-06-0189    TCGA-06-0192 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0195    TCGA-06-0209    TCGA-06-0213    TCGA-06-0214    TCGA-06-0216 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240    TCGA-06-0241 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648    TCGA-06-0649 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0650    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744    TCGA-06-0745 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875    TCGA-06-0876 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881    TCGA-06-0882 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0939    TCGA-06-1804    TCGA-06-1806    TCGA-06-2557    TCGA-06-2558 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5415    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858    TCGA-06-5859 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-6388    TCGA-06-6389    TCGA-06-6390    TCGA-06-6391    TCGA-06-6693 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-6694    TCGA-06-6695    TCGA-06-6697    TCGA-06-6698    TCGA-06-6699 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-6700    TCGA-06-6701    TCGA-08-0386    TCGA-12-0615    TCGA-12-0616 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692    TCGA-12-0821 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-12-3649    TCGA-12-3650    TCGA-12-3652    TCGA-12-3653    TCGA-12-5295 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-12-5299    TCGA-12-5301    TCGA-14-0740    TCGA-14-0781    TCGA-14-0786 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813    TCGA-14-0817 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-0862    TCGA-14-0871    TCGA-14-1043    TCGA-14-1395    TCGA-14-1450 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-1456    TCGA-14-1823    TCGA-14-1825    TCGA-14-1829    TCGA-14-2554 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-4157    TCGA-15-0742    TCGA-15-1444    TCGA-16-0846    TCGA-16-0861 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-16-1045    TCGA-16-1048    TCGA-19-1390    TCGA-19-2619    TCGA-19-2620 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-2623    TCGA-19-2624    TCGA-19-2625    TCGA-19-2629    TCGA-19-2631 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-5947    TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5953 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-5954    TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-26-1439    TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-26-5135    TCGA-26-5136    TCGA-26-5139    TCGA-26-6173    TCGA-26-6174 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-1830    TCGA-27-1831    TCGA-27-1832    TCGA-27-1833    TCGA-27-1834 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-1835    TCGA-27-1836    TCGA-27-1837    TCGA-27-1838    TCGA-27-2518 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-2519    TCGA-27-2521    TCGA-27-2523    TCGA-27-2524    TCGA-27-2526 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-2527    TCGA-27-2528    TCGA-28-1747    TCGA-28-1753    TCGA-28-2501 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-2502    TCGA-28-2509    TCGA-28-2510    TCGA-28-2513    TCGA-28-2514 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-5204    TCGA-28-5207    TCGA-28-5208    TCGA-28-5209    TCGA-28-5211 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-5213    TCGA-28-5214    TCGA-28-5215    TCGA-28-5216    TCGA-28-5218 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-5219    TCGA-28-5220    TCGA-28-6450    TCGA-32-1970    TCGA-32-1977 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-1979    TCGA-32-1980    TCGA-32-1982    TCGA-32-1986    TCGA-32-1991 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-2491    TCGA-32-2494    TCGA-32-2495    TCGA-32-2615    TCGA-32-2632 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-2634    TCGA-32-2638    TCGA-32-4208    TCGA-32-4210    TCGA-32-4211 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-4719    TCGA-32-5222    TCGA-41-2571    TCGA-41-2572    TCGA-41-2573 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-41-2575    TCGA-41-3392    TCGA-41-3393    TCGA-41-3915    TCGA-41-4097 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-41-5651    TCGA-41-6646    TCGA-74-6573    TCGA-74-6575    TCGA-74-6577 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-74-6578    TCGA-74-6584    TCGA-76-4925    TCGA-76-4926    TCGA-76-4928 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-4929    TCGA-76-4931    TCGA-76-4934    TCGA-76-4935    TCGA-76-6191 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-6192    TCGA-76-6193    TCGA-76-6280    TCGA-76-6282    TCGA-76-6283 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-6285    TCGA-76-6286    TCGA-76-6656    TCGA-76-6657    TCGA-76-6660 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-6661    TCGA-76-6662    TCGA-76-6663    TCGA-76-6664    TCGA-81-5910 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-81-5911    TCGA-87-5896    TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-4943    TCGA-CS-4944    TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-5395    TCGA-CS-5396    TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-6290    TCGA-CS-6665    TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-6669    TCGA-CS-6670    TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-5275    TCGA-DB-5276    TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-5280    TCGA-DB-5281    TCGA-DB-A4X9    TCGA-DB-A4XA    TCGA-DB-A4XB 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A4XC    TCGA-DB-A4XD    TCGA-DB-A4XE    TCGA-DB-A4XF    TCGA-DB-A4XG 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A4XH    TCGA-DB-A64L    TCGA-DB-A64O    TCGA-DB-A64P    TCGA-DB-A64Q 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A64R    TCGA-DB-A64S    TCGA-DB-A64U    TCGA-DB-A64V    TCGA-DB-A64W 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A64X    TCGA-DB-A75K    TCGA-DB-A75L    TCGA-DB-A75M    TCGA-DB-A75O 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141    TCGA-DH-5142    TCGA-DH-5143 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B    TCGA-DH-A66D    TCGA-DH-A66F 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US    TCGA-DH-A7UT    TCGA-DH-A7UU 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849    TCGA-DU-5851    TCGA-DU-5852 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855    TCGA-DU-5870    TCGA-DU-5871 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392    TCGA-DU-6393    TCGA-DU-6394 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397    TCGA-DU-6399    TCGA-DU-6400 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403    TCGA-DU-6404    TCGA-DU-6405 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408    TCGA-DU-6410    TCGA-DU-6542 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008    TCGA-DU-7009    TCGA-DU-7010 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7011    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7014    TCGA-DU-7015 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7018    TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7292    TCGA-DU-7294 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7298    TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7304    TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-8162    TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8166 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-8167    TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A5TT    TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A6S3    TCGA-DU-A6S6    TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A76L    TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A7TA    TCGA-DU-A7TB    TCGA-DU-A7TC    TCGA-DU-A7TD    TCGA-DU-A7TG 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A7TI    TCGA-DU-A7TJ    TCGA-E1-5302    TCGA-E1-5303    TCGA-E1-5304 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-5305    TCGA-E1-5307    TCGA-E1-5311    TCGA-E1-5318    TCGA-E1-5319 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-5322    TCGA-E1-A7YD    TCGA-E1-A7YE    TCGA-E1-A7YH    TCGA-E1-A7YI 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YJ    TCGA-E1-A7YK    TCGA-E1-A7YL    TCGA-E1-A7YM    TCGA-E1-A7YN 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YO    TCGA-E1-A7YQ    TCGA-E1-A7YS    TCGA-E1-A7YU    TCGA-E1-A7YV 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YW    TCGA-E1-A7YY    TCGA-E1-A7Z2    TCGA-E1-A7Z3    TCGA-E1-A7Z4 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7Z6    TCGA-EZ-7264    TCGA-F6-A8O3    TCGA-F6-A8O4    TCGA-FG-5962 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-5963    TCGA-FG-5964    TCGA-FG-5965    TCGA-FG-6688    TCGA-FG-6689 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-6690    TCGA-FG-6691    TCGA-FG-6692    TCGA-FG-7634    TCGA-FG-7636 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-7638    TCGA-FG-7641    TCGA-FG-7643    TCGA-FG-8181    TCGA-FG-8182 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-8185    TCGA-FG-8186    TCGA-FG-8187    TCGA-FG-8188    TCGA-FG-8189 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-8191    TCGA-FG-A4MT    TCGA-FG-A4MU    TCGA-FG-A4MW    TCGA-FG-A4MX 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A4MY    TCGA-FG-A60J    TCGA-FG-A60K    TCGA-FG-A60L    TCGA-FG-A6IZ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A6J1    TCGA-FG-A6J3    TCGA-FG-A70Y    TCGA-FG-A70Z    TCGA-FG-A710 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A711    TCGA-FG-A713    TCGA-FG-A87N    TCGA-FG-A87Q    TCGA-FN-7833 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7467    TCGA-HT-7468    TCGA-HT-7469    TCGA-HT-7470    TCGA-HT-7471 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7472    TCGA-HT-7473    TCGA-HT-7474    TCGA-HT-7475    TCGA-HT-7476 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7477    TCGA-HT-7478    TCGA-HT-7479    TCGA-HT-7480    TCGA-HT-7481 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7482    TCGA-HT-7483    TCGA-HT-7485    TCGA-HT-7601    TCGA-HT-7602 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7603    TCGA-HT-7604    TCGA-HT-7605    TCGA-HT-7606    TCGA-HT-7607 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7608    TCGA-HT-7609    TCGA-HT-7610    TCGA-HT-7611    TCGA-HT-7616 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7620    TCGA-HT-7676    TCGA-HT-7677    TCGA-HT-7680    TCGA-HT-7681 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7684    TCGA-HT-7686    TCGA-HT-7687    TCGA-HT-7688    TCGA-HT-7689 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7690    TCGA-HT-7691    TCGA-HT-7692    TCGA-HT-7693    TCGA-HT-7694 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7695    TCGA-HT-7854    TCGA-HT-7855    TCGA-HT-7856    TCGA-HT-7857 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7858    TCGA-HT-7860    TCGA-HT-7873    TCGA-HT-7874    TCGA-HT-7875 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7877    TCGA-HT-7879    TCGA-HT-7880    TCGA-HT-7881    TCGA-HT-7882 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7884    TCGA-HT-7902    TCGA-HT-8010    TCGA-HT-8011    TCGA-HT-8012 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8013    TCGA-HT-8015    TCGA-HT-8018    TCGA-HT-8019    TCGA-HT-8104 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8105    TCGA-HT-8106    TCGA-HT-8107    TCGA-HT-8108    TCGA-HT-8109 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8110    TCGA-HT-8111    TCGA-HT-8113    TCGA-HT-8114    TCGA-HT-8563 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8564    TCGA-HT-A4DS    TCGA-HT-A4DV    TCGA-HT-A5R5    TCGA-HT-A5R7 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A5R9    TCGA-HT-A5RA    TCGA-HT-A5RB    TCGA-HT-A5RC    TCGA-HT-A614 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A615    TCGA-HT-A616    TCGA-HT-A617    TCGA-HT-A618    TCGA-HT-A619 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A61B    TCGA-HT-A61C    TCGA-HT-A74H    TCGA-HT-A74J    TCGA-HT-A74K 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A74L    TCGA-HT-A74O    TCGA-HW-7486    TCGA-HW-7487    TCGA-HW-7489 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-7490    TCGA-HW-7491    TCGA-HW-7493    TCGA-HW-7495    TCGA-HW-8319 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-8320    TCGA-HW-8321    TCGA-HW-8322    TCGA-HW-A5KJ    TCGA-HW-A5KK 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-A5KL    TCGA-HW-A5KM    TCGA-IK-7675    TCGA-IK-8125    TCGA-KT-A74X 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-KT-A7W1    TCGA-P5-A5ET    TCGA-P5-A5EU    TCGA-P5-A5EV    TCGA-P5-A5EW 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A5EX    TCGA-P5-A5EY    TCGA-P5-A5EZ    TCGA-P5-A5F0    TCGA-P5-A5F1 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A5F2    TCGA-P5-A5F4    TCGA-P5-A5F6    TCGA-P5-A72U    TCGA-P5-A72W 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A72X    TCGA-P5-A72Z    TCGA-P5-A730    TCGA-P5-A731    TCGA-P5-A733 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A735    TCGA-P5-A736    TCGA-P5-A737    TCGA-P5-A77W    TCGA-P5-A77X 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A780    TCGA-P5-A781    TCGA-QH-A65R    TCGA-QH-A65S    TCGA-QH-A65V 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A65X    TCGA-QH-A65Z    TCGA-QH-A6CS    TCGA-QH-A6CU    TCGA-QH-A6CV 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6CW    TCGA-QH-A6CX    TCGA-QH-A6CY    TCGA-QH-A6CZ    TCGA-QH-A6X3 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6X4    TCGA-QH-A6X5    TCGA-QH-A6X8    TCGA-QH-A6X9    TCGA-QH-A6XA 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6XC    TCGA-QH-A86X    TCGA-QH-A870    TCGA-R8-A6MK    TCGA-R8-A6ML 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-R8-A6MO    TCGA-R8-A6YH    TCGA-R8-A73M    TCGA-RY-A83X    TCGA-RY-A83Y 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-RY-A83Z    TCGA-RY-A840    TCGA-RY-A843    TCGA-RY-A845    TCGA-RY-A847 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6TS    TCGA-S9-A6TU    TCGA-S9-A6TV    TCGA-S9-A6TW    TCGA-S9-A6TX 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6TY    TCGA-S9-A6TZ    TCGA-S9-A6U0    TCGA-S9-A6U1    TCGA-S9-A6U2 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6U5    TCGA-S9-A6U6    TCGA-S9-A6U8    TCGA-S9-A6U9    TCGA-S9-A6UA 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6UB    TCGA-S9-A6WD    TCGA-S9-A6WE    TCGA-S9-A6WG    TCGA-S9-A6WH 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6WI    TCGA-S9-A6WL    TCGA-S9-A6WM    TCGA-S9-A6WN    TCGA-S9-A6WO 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6WP    TCGA-S9-A6WQ    TCGA-S9-A7IQ    TCGA-S9-A7IS    TCGA-S9-A7IX 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7IY    TCGA-S9-A7IZ    TCGA-S9-A7J0    TCGA-S9-A7J1    TCGA-S9-A7J2 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7J3    TCGA-S9-A7QW    TCGA-S9-A7QX    TCGA-S9-A7QY    TCGA-S9-A7QZ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7R1    TCGA-S9-A7R2    TCGA-S9-A7R3    TCGA-S9-A7R4    TCGA-S9-A7R7 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7R8    TCGA-S9-A89V    TCGA-S9-A89Z    TCGA-TM-A7C3    TCGA-TM-A7C4 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A7C5    TCGA-TM-A7CA    TCGA-TM-A7CF    TCGA-TM-A84B    TCGA-TM-A84C 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84F    TCGA-TM-A84G    TCGA-TM-A84H    TCGA-TM-A84I    TCGA-TM-A84J 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84L    TCGA-TM-A84M    TCGA-TM-A84O    TCGA-TM-A84Q    TCGA-TM-A84R 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84S    TCGA-TM-A84T    TCGA-TQ-A7RF    TCGA-TQ-A7RG    TCGA-TQ-A7RH 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RI    TCGA-TQ-A7RJ    TCGA-TQ-A7RK    TCGA-TQ-A7RM    TCGA-TQ-A7RN 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RO    TCGA-TQ-A7RP    TCGA-TQ-A7RQ    TCGA-TQ-A7RR    TCGA-TQ-A7RS 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RU    TCGA-TQ-A7RW    TCGA-TQ-A8XE    TCGA-VM-A8C8    TCGA-VM-A8C9 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VM-A8CA    TCGA-VM-A8CB    TCGA-VM-A8CD    TCGA-VM-A8CE    TCGA-VM-A8CF 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VM-A8CH    TCGA-VV-A829    TCGA-VV-A86M    TCGA-VW-A7QS    TCGA-VW-A8FI 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-W9-A837    TCGA-WH-A86K    TCGA-WY-A858    TCGA-WY-A859    TCGA-WY-A85A 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-WY-A85B    TCGA-WY-A85C    TCGA-WY-A85D    TCGA-WY-A85E 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDA MUTATED        0      1      0      0
  CDA WILD-TYPE    153    222     88    161
D147V6, multiclass
[1] "Remove cluster labels:" "CDA MUTATED"           
clus
  CDA MUTATED CDA WILD-TYPE 
            1           624 
   TCGA-06-0152    TCGA-06-0650    TCGA-06-1804    TCGA-06-1806    TCGA-06-5408 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5859    TCGA-06-6388    TCGA-06-6389    TCGA-06-6390    TCGA-06-6391 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-6693    TCGA-06-6694    TCGA-06-6695    TCGA-06-6697    TCGA-06-6698 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-6699    TCGA-06-6700    TCGA-06-6701    TCGA-12-5295    TCGA-12-5299 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-12-5301    TCGA-14-0740    TCGA-14-0781    TCGA-14-0862    TCGA-14-1043 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-1395    TCGA-14-1450    TCGA-15-1444    TCGA-19-5947    TCGA-19-5950 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-5951    TCGA-19-5952    TCGA-19-5953    TCGA-19-5954    TCGA-19-5955 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1442    TCGA-26-5132 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-26-5133    TCGA-26-5134    TCGA-26-5135    TCGA-26-5136    TCGA-26-5139 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-26-6173    TCGA-26-6174    TCGA-28-2501    TCGA-28-2510    TCGA-28-5204 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-5207    TCGA-28-5208    TCGA-28-5209    TCGA-28-5211    TCGA-28-5213 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-5214    TCGA-28-5215    TCGA-28-5216    TCGA-28-5218    TCGA-28-5219 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-5220    TCGA-28-6450    TCGA-32-1979    TCGA-32-1980    TCGA-32-5222 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-41-5651    TCGA-41-6646    TCGA-74-6573    TCGA-74-6575    TCGA-74-6577 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-74-6578    TCGA-74-6584    TCGA-76-4925    TCGA-76-4926    TCGA-76-4927 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932    TCGA-76-4934 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193    TCGA-76-6280 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6283    TCGA-76-6285    TCGA-76-6286    TCGA-76-6656 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-6657    TCGA-76-6660    TCGA-76-6661    TCGA-76-6662    TCGA-76-6663 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-6664    TCGA-81-5910    TCGA-81-5911    TCGA-87-5896    TCGA-CS-4938 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944    TCGA-CS-5390 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396    TCGA-CS-5397 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665    TCGA-CS-6666 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670    TCGA-DB-5270 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276    TCGA-DB-5277 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5280    TCGA-DB-5281    TCGA-DB-A4X9 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD    TCGA-DB-A4XE 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L    TCGA-DB-A64O 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S    TCGA-DB-A64U 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K    TCGA-DB-A75L 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A75M    TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-5142    TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-A66D    TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-A7UT    TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-5851    TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-5870    TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6393    TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6399    TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6404    TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6410    TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7009    TCGA-DU-7010    TCGA-DU-7011    TCGA-DU-7012    TCGA-DU-7013 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7014    TCGA-DU-7015    TCGA-DU-7018    TCGA-DU-7019    TCGA-DU-7290 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7292    TCGA-DU-7294    TCGA-DU-7298    TCGA-DU-7299    TCGA-DU-7300 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7301    TCGA-DU-7302    TCGA-DU-7304    TCGA-DU-7306    TCGA-DU-7309 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-8158    TCGA-DU-8161    TCGA-DU-8162    TCGA-DU-8163    TCGA-DU-8164 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-8165    TCGA-DU-8166    TCGA-DU-8167    TCGA-DU-8168    TCGA-DU-A5TP 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A5TR    TCGA-DU-A5TS    TCGA-DU-A5TT    TCGA-DU-A5TU    TCGA-DU-A5TW 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A5TY    TCGA-DU-A6S2    TCGA-DU-A6S3    TCGA-DU-A6S6    TCGA-DU-A6S7 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A6S8    TCGA-DU-A76K    TCGA-DU-A76L    TCGA-DU-A76O    TCGA-DU-A76R 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A7T6    TCGA-DU-A7T8    TCGA-DU-A7TA    TCGA-DU-A7TB    TCGA-DU-A7TC 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A7TD    TCGA-DU-A7TG    TCGA-DU-A7TI    TCGA-DU-A7TJ    TCGA-E1-5302 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-5303    TCGA-E1-5304    TCGA-E1-5305    TCGA-E1-5307    TCGA-E1-5311 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-5318    TCGA-E1-5319    TCGA-E1-5322    TCGA-E1-A7YD    TCGA-E1-A7YE 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YH    TCGA-E1-A7YI    TCGA-E1-A7YJ    TCGA-E1-A7YK    TCGA-E1-A7YL 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YM    TCGA-E1-A7YN    TCGA-E1-A7YO    TCGA-E1-A7YQ    TCGA-E1-A7YS 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YU    TCGA-E1-A7YV    TCGA-E1-A7YW    TCGA-E1-A7YY    TCGA-E1-A7Z2 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7Z3    TCGA-E1-A7Z4    TCGA-E1-A7Z6    TCGA-EZ-7264    TCGA-F6-A8O3 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-F6-A8O4    TCGA-FG-5962    TCGA-FG-5963    TCGA-FG-5964    TCGA-FG-5965 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-6688    TCGA-FG-6689    TCGA-FG-6690    TCGA-FG-6691    TCGA-FG-6692 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-7634    TCGA-FG-7636    TCGA-FG-7637    TCGA-FG-7638    TCGA-FG-7641 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-7643    TCGA-FG-8181    TCGA-FG-8182    TCGA-FG-8185    TCGA-FG-8186 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-8187    TCGA-FG-8188    TCGA-FG-8189    TCGA-FG-8191    TCGA-FG-A4MT 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A4MU    TCGA-FG-A4MW    TCGA-FG-A4MX    TCGA-FG-A4MY    TCGA-FG-A60J 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A60K    TCGA-FG-A60L    TCGA-FG-A6IZ    TCGA-FG-A6J1    TCGA-FG-A6J3 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A70Y    TCGA-FG-A70Z    TCGA-FG-A710    TCGA-FG-A711    TCGA-FG-A713 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A87N    TCGA-FG-A87Q    TCGA-FN-7833    TCGA-HT-7467    TCGA-HT-7468 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7469    TCGA-HT-7470    TCGA-HT-7471    TCGA-HT-7472    TCGA-HT-7473 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7474    TCGA-HT-7475    TCGA-HT-7476    TCGA-HT-7477    TCGA-HT-7478 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7479    TCGA-HT-7480    TCGA-HT-7481    TCGA-HT-7482    TCGA-HT-7483 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7485    TCGA-HT-7601    TCGA-HT-7602    TCGA-HT-7603    TCGA-HT-7604 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7605    TCGA-HT-7606    TCGA-HT-7607    TCGA-HT-7608    TCGA-HT-7609 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7610    TCGA-HT-7611    TCGA-HT-7616    TCGA-HT-7620    TCGA-HT-7676 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7677    TCGA-HT-7680    TCGA-HT-7681    TCGA-HT-7684    TCGA-HT-7686 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7687    TCGA-HT-7688    TCGA-HT-7689    TCGA-HT-7690    TCGA-HT-7691 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7692    TCGA-HT-7693    TCGA-HT-7694    TCGA-HT-7695    TCGA-HT-7854 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7855    TCGA-HT-7856    TCGA-HT-7857    TCGA-HT-7858    TCGA-HT-7860 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7873    TCGA-HT-7874    TCGA-HT-7875    TCGA-HT-7877    TCGA-HT-7879 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7880    TCGA-HT-7881    TCGA-HT-7882    TCGA-HT-7884    TCGA-HT-7902 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8010    TCGA-HT-8011    TCGA-HT-8012    TCGA-HT-8013    TCGA-HT-8015 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8018    TCGA-HT-8019    TCGA-HT-8104    TCGA-HT-8105    TCGA-HT-8106 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8107    TCGA-HT-8108    TCGA-HT-8109    TCGA-HT-8110    TCGA-HT-8111 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8113    TCGA-HT-8114    TCGA-HT-8558    TCGA-HT-8563    TCGA-HT-8564 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A4DS    TCGA-HT-A4DV    TCGA-HT-A5R5    TCGA-HT-A5R7    TCGA-HT-A5R9 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A5RA    TCGA-HT-A5RB    TCGA-HT-A5RC    TCGA-HT-A614    TCGA-HT-A615 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A616    TCGA-HT-A617    TCGA-HT-A618    TCGA-HT-A619    TCGA-HT-A61A 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A61B    TCGA-HT-A61C    TCGA-HT-A74H    TCGA-HT-A74J    TCGA-HT-A74K 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A74L    TCGA-HT-A74O    TCGA-HW-7486    TCGA-HW-7487    TCGA-HW-7489 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-7490    TCGA-HW-7491    TCGA-HW-7493    TCGA-HW-7495    TCGA-HW-8319 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-8320    TCGA-HW-8321    TCGA-HW-8322    TCGA-HW-A5KJ    TCGA-HW-A5KK 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-A5KL    TCGA-HW-A5KM    TCGA-IK-7675    TCGA-IK-8125    TCGA-KT-A74X 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-KT-A7W1    TCGA-P5-A5ET    TCGA-P5-A5EU    TCGA-P5-A5EV    TCGA-P5-A5EW 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A5EX    TCGA-P5-A5EY    TCGA-P5-A5EZ    TCGA-P5-A5F0    TCGA-P5-A5F1 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A5F2    TCGA-P5-A5F4    TCGA-P5-A5F6    TCGA-P5-A72U    TCGA-P5-A72W 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A72X    TCGA-P5-A72Z    TCGA-P5-A730    TCGA-P5-A731    TCGA-P5-A733 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A735    TCGA-P5-A736    TCGA-P5-A737    TCGA-P5-A77W    TCGA-P5-A77X 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A780    TCGA-P5-A781    TCGA-QH-A65R    TCGA-QH-A65S    TCGA-QH-A65V 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A65X    TCGA-QH-A65Z    TCGA-QH-A6CS    TCGA-QH-A6CU    TCGA-QH-A6CV 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6CW    TCGA-QH-A6CX    TCGA-QH-A6CY    TCGA-QH-A6CZ    TCGA-QH-A6X3 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6X4    TCGA-QH-A6X5    TCGA-QH-A6X8    TCGA-QH-A6X9    TCGA-QH-A6XA 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6XC    TCGA-QH-A86X    TCGA-QH-A870    TCGA-R8-A6MK    TCGA-R8-A6ML 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-R8-A6MO    TCGA-R8-A6YH    TCGA-R8-A73M    TCGA-RY-A83X    TCGA-RY-A83Y 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-RY-A83Z    TCGA-RY-A840    TCGA-RY-A843    TCGA-RY-A845    TCGA-RY-A847 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6TS    TCGA-S9-A6TU    TCGA-S9-A6TV    TCGA-S9-A6TW    TCGA-S9-A6TX 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6TY    TCGA-S9-A6TZ    TCGA-S9-A6U0    TCGA-S9-A6U1    TCGA-S9-A6U2 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6U5    TCGA-S9-A6U6    TCGA-S9-A6U8    TCGA-S9-A6U9    TCGA-S9-A6UA 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6UB    TCGA-S9-A6WD    TCGA-S9-A6WE    TCGA-S9-A6WG    TCGA-S9-A6WH 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6WI    TCGA-S9-A6WL    TCGA-S9-A6WM    TCGA-S9-A6WN    TCGA-S9-A6WO 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6WP    TCGA-S9-A6WQ    TCGA-S9-A7IQ    TCGA-S9-A7IS    TCGA-S9-A7IX 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7IY    TCGA-S9-A7IZ    TCGA-S9-A7J0    TCGA-S9-A7J1    TCGA-S9-A7J2 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7J3    TCGA-S9-A7QW    TCGA-S9-A7QX    TCGA-S9-A7QY    TCGA-S9-A7QZ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7R1    TCGA-S9-A7R2    TCGA-S9-A7R3    TCGA-S9-A7R4    TCGA-S9-A7R7 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7R8    TCGA-S9-A89V    TCGA-S9-A89Z    TCGA-TM-A7C3    TCGA-TM-A7C4 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A7C5    TCGA-TM-A7CA    TCGA-TM-A7CF    TCGA-TM-A84B    TCGA-TM-A84C 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84F    TCGA-TM-A84G    TCGA-TM-A84H    TCGA-TM-A84I    TCGA-TM-A84J 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84L    TCGA-TM-A84M    TCGA-TM-A84O    TCGA-TM-A84Q    TCGA-TM-A84R 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84S    TCGA-TM-A84T    TCGA-TQ-A7RF    TCGA-TQ-A7RG    TCGA-TQ-A7RH 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RI    TCGA-TQ-A7RJ    TCGA-TQ-A7RK    TCGA-TQ-A7RM    TCGA-TQ-A7RN 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RO    TCGA-TQ-A7RP    TCGA-TQ-A7RQ    TCGA-TQ-A7RR    TCGA-TQ-A7RS 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RU    TCGA-TQ-A7RW    TCGA-TQ-A8XE    TCGA-VM-A8C8    TCGA-VM-A8C9 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VM-A8CA    TCGA-VM-A8CB    TCGA-VM-A8CD    TCGA-VM-A8CE    TCGA-VM-A8CF 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VM-A8CH    TCGA-VV-A829    TCGA-VV-A86M    TCGA-VW-A7QS    TCGA-VW-A8FI 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-W9-A837    TCGA-WH-A86K    TCGA-WY-A858    TCGA-WY-A859    TCGA-WY-A85A 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-WY-A85B    TCGA-WY-A85C    TCGA-WY-A85D    TCGA-WY-A85E 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDA MUTATED        1      0      0      1
  CDA WILD-TYPE    184    155    138     94
D147V7, multiclass
[1] "Remove cluster labels:" "CDA MUTATED"           
clus
  CDA MUTATED CDA WILD-TYPE 
            2           571 
   TCGA-02-0003    TCGA-02-2470    TCGA-02-2485    TCGA-06-0126    TCGA-06-0128 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0129    TCGA-06-0130    TCGA-06-0154    TCGA-06-0155    TCGA-06-0189 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0238    TCGA-06-0644    TCGA-06-0650    TCGA-06-0875    TCGA-06-0876 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0882    TCGA-06-0939 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-1804    TCGA-06-1806    TCGA-06-2557    TCGA-06-2558    TCGA-06-2559 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-2562    TCGA-06-2563    TCGA-06-2564    TCGA-06-2565    TCGA-06-2567 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-2570    TCGA-06-5408    TCGA-06-5410    TCGA-06-5411    TCGA-06-5412 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5413    TCGA-06-5414    TCGA-06-5415    TCGA-06-5417    TCGA-06-5418 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5856    TCGA-06-5858    TCGA-06-5859    TCGA-06-6388    TCGA-06-6389 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-6390    TCGA-06-6391    TCGA-06-6693    TCGA-06-6694    TCGA-06-6695 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-6697    TCGA-06-6698    TCGA-06-6699    TCGA-06-6700    TCGA-06-6701 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-08-0386    TCGA-12-0692    TCGA-12-1597    TCGA-12-3649    TCGA-12-3650 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-12-3652    TCGA-12-3653    TCGA-12-5295    TCGA-12-5301    TCGA-14-0813 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-0862    TCGA-14-0871    TCGA-14-1823    TCGA-16-0846    TCGA-19-1390 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-2619    TCGA-19-2620    TCGA-19-2625    TCGA-19-2631    TCGA-19-4068 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-5947    TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5953 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-5954    TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-6173 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-26-6174    TCGA-27-1830    TCGA-27-1831    TCGA-27-1832    TCGA-27-1833 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-1834    TCGA-27-1836    TCGA-27-2518    TCGA-27-2528    TCGA-28-1747 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-1753    TCGA-28-2501    TCGA-28-5208    TCGA-28-5214    TCGA-32-1970 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-1982    TCGA-32-1986    TCGA-32-1991    TCGA-32-4210    TCGA-32-4211 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-5222    TCGA-41-2573    TCGA-41-2575    TCGA-41-3392    TCGA-41-3393 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-41-3915    TCGA-41-4097    TCGA-41-5651    TCGA-41-6646    TCGA-74-6573 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-74-6575    TCGA-74-6577    TCGA-74-6578    TCGA-74-6584    TCGA-76-4926 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-4927    TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-6192    TCGA-76-6193    TCGA-76-6282    TCGA-76-6283    TCGA-76-6285 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-6656    TCGA-76-6657    TCGA-76-6660    TCGA-76-6661    TCGA-76-6662 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-6663    TCGA-76-6664    TCGA-81-5910    TCGA-CS-4938    TCGA-CS-4942 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-4943    TCGA-CS-4944    TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-5396    TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6665 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670    TCGA-DB-5270 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276    TCGA-DB-5277 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5280    TCGA-DB-5281    TCGA-DB-A4X9 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD    TCGA-DB-A4XE 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L    TCGA-DB-A64O 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S    TCGA-DB-A64U 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K    TCGA-DB-A75L 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A75M    TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-5142    TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A66B    TCGA-DH-A66D 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7US    TCGA-DU-5847    TCGA-DU-5849 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-5851    TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-5870    TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6393    TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6399    TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6404    TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6410    TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7009    TCGA-DU-7010    TCGA-DU-7011    TCGA-DU-7012    TCGA-DU-7013 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7014    TCGA-DU-7015    TCGA-DU-7018    TCGA-DU-7019    TCGA-DU-7290 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7292    TCGA-DU-7294    TCGA-DU-7298    TCGA-DU-7300    TCGA-DU-7301 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7302    TCGA-DU-7304    TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-8161    TCGA-DU-8162    TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-8166    TCGA-DU-8167    TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A5TS    TCGA-DU-A5TT    TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A6S2    TCGA-DU-A6S3    TCGA-DU-A6S8    TCGA-DU-A76K    TCGA-DU-A76L 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7TA    TCGA-DU-A7TB 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A7TD    TCGA-DU-A7TG    TCGA-DU-A7TI    TCGA-DU-A7TJ    TCGA-E1-5302 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-5303    TCGA-E1-5304    TCGA-E1-5305    TCGA-E1-5307    TCGA-E1-5311 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-5318    TCGA-E1-5319    TCGA-E1-5322    TCGA-E1-A7YH    TCGA-E1-A7YI 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YJ    TCGA-E1-A7YL    TCGA-E1-A7YM    TCGA-E1-A7YN    TCGA-E1-A7YQ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YS    TCGA-E1-A7YV    TCGA-E1-A7YW    TCGA-E1-A7YY    TCGA-E1-A7Z2 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7Z3    TCGA-E1-A7Z6    TCGA-EZ-7264    TCGA-F6-A8O3    TCGA-F6-A8O4 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-5962    TCGA-FG-5963    TCGA-FG-5964    TCGA-FG-5965    TCGA-FG-6688 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-6689    TCGA-FG-6690    TCGA-FG-6691    TCGA-FG-7634    TCGA-FG-7636 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-7637    TCGA-FG-7638    TCGA-FG-7641    TCGA-FG-7643    TCGA-FG-8181 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-8182    TCGA-FG-8185    TCGA-FG-8186    TCGA-FG-8187    TCGA-FG-8188 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-8189    TCGA-FG-8191    TCGA-FG-A4MT    TCGA-FG-A4MU    TCGA-FG-A4MW 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A4MX    TCGA-FG-A4MY    TCGA-FG-A60J    TCGA-FG-A60L    TCGA-FG-A6IZ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A6J3    TCGA-FG-A70Y    TCGA-FG-A70Z    TCGA-FG-A710    TCGA-FG-A713 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A87N    TCGA-FG-A87Q    TCGA-HT-7467    TCGA-HT-7468    TCGA-HT-7469 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7470    TCGA-HT-7471    TCGA-HT-7472    TCGA-HT-7473    TCGA-HT-7474 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7475    TCGA-HT-7476    TCGA-HT-7477    TCGA-HT-7478    TCGA-HT-7479 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7480    TCGA-HT-7481    TCGA-HT-7482    TCGA-HT-7483    TCGA-HT-7485 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7601    TCGA-HT-7602    TCGA-HT-7603    TCGA-HT-7604    TCGA-HT-7605 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7606    TCGA-HT-7607    TCGA-HT-7608    TCGA-HT-7609    TCGA-HT-7610 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7611    TCGA-HT-7616    TCGA-HT-7620    TCGA-HT-7676    TCGA-HT-7677 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7680    TCGA-HT-7681    TCGA-HT-7684    TCGA-HT-7686    TCGA-HT-7687 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7688    TCGA-HT-7689    TCGA-HT-7690    TCGA-HT-7691    TCGA-HT-7692 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7693    TCGA-HT-7694    TCGA-HT-7695    TCGA-HT-7854    TCGA-HT-7855 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7856    TCGA-HT-7857    TCGA-HT-7858    TCGA-HT-7860    TCGA-HT-7873 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7874    TCGA-HT-7875    TCGA-HT-7877    TCGA-HT-7879    TCGA-HT-7880 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7881    TCGA-HT-7882    TCGA-HT-7884    TCGA-HT-7902    TCGA-HT-8010 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8011    TCGA-HT-8012    TCGA-HT-8013    TCGA-HT-8015    TCGA-HT-8018 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8019    TCGA-HT-8104    TCGA-HT-8105    TCGA-HT-8106    TCGA-HT-8107 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8109    TCGA-HT-8110    TCGA-HT-8111    TCGA-HT-8113    TCGA-HT-8114 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8558    TCGA-HT-8564    TCGA-HT-A4DV    TCGA-HT-A5R5    TCGA-HT-A5R7 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A5R9    TCGA-HT-A5RB    TCGA-HT-A614    TCGA-HT-A615    TCGA-HT-A616 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A617    TCGA-HT-A618    TCGA-HT-A619    TCGA-HT-A61A    TCGA-HT-A61B 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A74H    TCGA-HT-A74J    TCGA-HT-A74L    TCGA-HT-A74O    TCGA-HW-7486 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-7487    TCGA-HW-7489    TCGA-HW-7490    TCGA-HW-7491    TCGA-HW-7493 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-7495    TCGA-HW-8319    TCGA-HW-8320    TCGA-HW-8321    TCGA-HW-8322 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-A5KJ    TCGA-HW-A5KK    TCGA-HW-A5KM    TCGA-IK-7675    TCGA-IK-8125 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-KT-A74X    TCGA-P5-A5ET    TCGA-P5-A5EU    TCGA-P5-A5EV    TCGA-P5-A5EW 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A5EX    TCGA-P5-A5EY    TCGA-P5-A5EZ    TCGA-P5-A5F0    TCGA-P5-A5F1 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A5F2    TCGA-P5-A5F4    TCGA-P5-A5F6    TCGA-P5-A72U    TCGA-P5-A72W 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A72X    TCGA-P5-A72Z    TCGA-P5-A730    TCGA-P5-A731    TCGA-P5-A733 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A735    TCGA-P5-A736    TCGA-P5-A737    TCGA-P5-A77W    TCGA-P5-A77X 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A780    TCGA-P5-A781    TCGA-QH-A65S    TCGA-QH-A65V    TCGA-QH-A65X 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A65Z    TCGA-QH-A6CS    TCGA-QH-A6CU    TCGA-QH-A6CV    TCGA-QH-A6CW 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6CX    TCGA-QH-A6CY    TCGA-QH-A6CZ    TCGA-QH-A6X4    TCGA-QH-A6X5 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6X8    TCGA-QH-A6X9    TCGA-QH-A6XA    TCGA-QH-A6XC    TCGA-QH-A86X 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A870    TCGA-R8-A6MK    TCGA-R8-A6ML    TCGA-R8-A6MO    TCGA-R8-A6YH 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-RY-A83X    TCGA-RY-A83Y    TCGA-RY-A83Z    TCGA-RY-A843    TCGA-RY-A845 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6TS    TCGA-S9-A6TU    TCGA-S9-A6TV    TCGA-S9-A6TX    TCGA-S9-A6TY 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6U0    TCGA-S9-A6U1    TCGA-S9-A6U5    TCGA-S9-A6U6    TCGA-S9-A6U9 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6WD    TCGA-S9-A6WE    TCGA-S9-A6WG    TCGA-S9-A6WH    TCGA-S9-A6WN 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6WP    TCGA-S9-A6WQ    TCGA-S9-A7IQ    TCGA-S9-A7IS    TCGA-S9-A7IY 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7IZ    TCGA-S9-A7J0    TCGA-S9-A7J1    TCGA-S9-A7J2    TCGA-S9-A7QX 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7QZ    TCGA-S9-A7R1    TCGA-S9-A7R4    TCGA-S9-A7R8    TCGA-TM-A7C5 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84R    TCGA-TM-A84S    TCGA-TQ-A7RF    TCGA-TQ-A7RG    TCGA-TQ-A7RH 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RK    TCGA-TQ-A7RN    TCGA-TQ-A7RQ    TCGA-TQ-A7RR    TCGA-TQ-A7RS 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RW    TCGA-TQ-A8XE    TCGA-VM-A8C8    TCGA-VM-A8C9    TCGA-VM-A8CA 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VM-A8CB    TCGA-VM-A8CD    TCGA-VM-A8CE    TCGA-VM-A8CH    TCGA-VV-A829 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VV-A86M    TCGA-VW-A7QS    TCGA-W9-A837    TCGA-WY-A85B    TCGA-WY-A85C 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-WY-A85D 
"CDA WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CDA MUTATED        1      1      0
  CDA WILD-TYPE    204    219    148
D147V8, multiclass
[1] "Remove cluster labels:" "CDA MUTATED"           
clus
  CDA MUTATED CDA WILD-TYPE 
            2           571 
   TCGA-02-0003    TCGA-02-2470    TCGA-02-2485    TCGA-06-0126    TCGA-06-0128 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0129    TCGA-06-0130    TCGA-06-0154    TCGA-06-0155    TCGA-06-0189 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0238    TCGA-06-0644    TCGA-06-0650    TCGA-06-0875    TCGA-06-0876 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0882    TCGA-06-0939 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-1804    TCGA-06-1806    TCGA-06-2557    TCGA-06-2558    TCGA-06-2559 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-2562    TCGA-06-2563    TCGA-06-2564    TCGA-06-2565    TCGA-06-2567 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-2570    TCGA-06-5408    TCGA-06-5410    TCGA-06-5411    TCGA-06-5412 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5413    TCGA-06-5414    TCGA-06-5415    TCGA-06-5417    TCGA-06-5418 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5856    TCGA-06-5858    TCGA-06-5859    TCGA-06-6388    TCGA-06-6389 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-6390    TCGA-06-6391    TCGA-06-6693    TCGA-06-6694    TCGA-06-6695 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-6697    TCGA-06-6698    TCGA-06-6699    TCGA-06-6700    TCGA-06-6701 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-08-0386    TCGA-12-0692    TCGA-12-1597    TCGA-12-3649    TCGA-12-3650 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-12-3652    TCGA-12-3653    TCGA-12-5295    TCGA-12-5301    TCGA-14-0813 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-0862    TCGA-14-0871    TCGA-14-1823    TCGA-16-0846    TCGA-19-1390 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-2619    TCGA-19-2620    TCGA-19-2625    TCGA-19-2631    TCGA-19-4068 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-5947    TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5953 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-5954    TCGA-19-5955    TCGA-19-5958    TCGA-19-5959    TCGA-19-5960 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-6173 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-26-6174    TCGA-27-1830    TCGA-27-1831    TCGA-27-1832    TCGA-27-1833 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-1834    TCGA-27-1836    TCGA-27-2518    TCGA-27-2528    TCGA-28-1747 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-1753    TCGA-28-2501    TCGA-28-5208    TCGA-28-5214    TCGA-32-1970 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-1982    TCGA-32-1986    TCGA-32-1991    TCGA-32-4210    TCGA-32-4211 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-5222    TCGA-41-2573    TCGA-41-2575    TCGA-41-3392    TCGA-41-3393 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-41-3915    TCGA-41-4097    TCGA-41-5651    TCGA-41-6646    TCGA-74-6573 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-74-6575    TCGA-74-6577    TCGA-74-6578    TCGA-74-6584    TCGA-76-4926 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-4927    TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-6192    TCGA-76-6193    TCGA-76-6282    TCGA-76-6283    TCGA-76-6285 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-6656    TCGA-76-6657    TCGA-76-6660    TCGA-76-6661    TCGA-76-6662 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-6663    TCGA-76-6664    TCGA-81-5910    TCGA-CS-4938    TCGA-CS-4942 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-4943    TCGA-CS-4944    TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-5396    TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6665 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670    TCGA-DB-5270 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276    TCGA-DB-5277 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5280    TCGA-DB-5281    TCGA-DB-A4X9 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD    TCGA-DB-A4XE 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L    TCGA-DB-A64O 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S    TCGA-DB-A64U 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K    TCGA-DB-A75L 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A75M    TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-5142    TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A66B    TCGA-DH-A66D 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7US    TCGA-DU-5847    TCGA-DU-5849 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-5851    TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-5870    TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6393    TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6399    TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6404    TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6410    TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7009    TCGA-DU-7010    TCGA-DU-7011    TCGA-DU-7012    TCGA-DU-7013 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7014    TCGA-DU-7015    TCGA-DU-7018    TCGA-DU-7019    TCGA-DU-7290 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7292    TCGA-DU-7294    TCGA-DU-7298    TCGA-DU-7300    TCGA-DU-7301 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7302    TCGA-DU-7304    TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-8161    TCGA-DU-8162    TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-8166    TCGA-DU-8167    TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A5TS    TCGA-DU-A5TT    TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A6S2    TCGA-DU-A6S3    TCGA-DU-A6S8    TCGA-DU-A76K    TCGA-DU-A76L 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7TA    TCGA-DU-A7TB 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A7TD    TCGA-DU-A7TG    TCGA-DU-A7TI    TCGA-DU-A7TJ    TCGA-E1-5302 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-5303    TCGA-E1-5304    TCGA-E1-5305    TCGA-E1-5307    TCGA-E1-5311 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-5318    TCGA-E1-5319    TCGA-E1-5322    TCGA-E1-A7YH    TCGA-E1-A7YI 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YJ    TCGA-E1-A7YL    TCGA-E1-A7YM    TCGA-E1-A7YN    TCGA-E1-A7YQ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YS    TCGA-E1-A7YV    TCGA-E1-A7YW    TCGA-E1-A7YY    TCGA-E1-A7Z2 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7Z3    TCGA-E1-A7Z6    TCGA-EZ-7264    TCGA-F6-A8O3    TCGA-F6-A8O4 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-5962    TCGA-FG-5963    TCGA-FG-5964    TCGA-FG-5965    TCGA-FG-6688 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-6689    TCGA-FG-6690    TCGA-FG-6691    TCGA-FG-7634    TCGA-FG-7636 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-7637    TCGA-FG-7638    TCGA-FG-7641    TCGA-FG-7643    TCGA-FG-8181 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-8182    TCGA-FG-8185    TCGA-FG-8186    TCGA-FG-8187    TCGA-FG-8188 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-8189    TCGA-FG-8191    TCGA-FG-A4MT    TCGA-FG-A4MU    TCGA-FG-A4MW 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A4MX    TCGA-FG-A4MY    TCGA-FG-A60J    TCGA-FG-A60L    TCGA-FG-A6IZ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A6J3    TCGA-FG-A70Y    TCGA-FG-A70Z    TCGA-FG-A710    TCGA-FG-A713 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A87N    TCGA-FG-A87Q    TCGA-HT-7467    TCGA-HT-7468    TCGA-HT-7469 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7470    TCGA-HT-7471    TCGA-HT-7472    TCGA-HT-7473    TCGA-HT-7474 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7475    TCGA-HT-7476    TCGA-HT-7477    TCGA-HT-7478    TCGA-HT-7479 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7480    TCGA-HT-7481    TCGA-HT-7482    TCGA-HT-7483    TCGA-HT-7485 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7601    TCGA-HT-7602    TCGA-HT-7603    TCGA-HT-7604    TCGA-HT-7605 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7606    TCGA-HT-7607    TCGA-HT-7608    TCGA-HT-7609    TCGA-HT-7610 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7611    TCGA-HT-7616    TCGA-HT-7620    TCGA-HT-7676    TCGA-HT-7677 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7680    TCGA-HT-7681    TCGA-HT-7684    TCGA-HT-7686    TCGA-HT-7687 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7688    TCGA-HT-7689    TCGA-HT-7690    TCGA-HT-7691    TCGA-HT-7692 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7693    TCGA-HT-7694    TCGA-HT-7695    TCGA-HT-7854    TCGA-HT-7855 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7856    TCGA-HT-7857    TCGA-HT-7858    TCGA-HT-7860    TCGA-HT-7873 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7874    TCGA-HT-7875    TCGA-HT-7877    TCGA-HT-7879    TCGA-HT-7880 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7881    TCGA-HT-7882    TCGA-HT-7884    TCGA-HT-7902    TCGA-HT-8010 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8011    TCGA-HT-8012    TCGA-HT-8013    TCGA-HT-8015    TCGA-HT-8018 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8019    TCGA-HT-8104    TCGA-HT-8105    TCGA-HT-8106    TCGA-HT-8107 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8109    TCGA-HT-8110    TCGA-HT-8111    TCGA-HT-8113    TCGA-HT-8114 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8558    TCGA-HT-8564    TCGA-HT-A4DV    TCGA-HT-A5R5    TCGA-HT-A5R7 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A5R9    TCGA-HT-A5RB    TCGA-HT-A614    TCGA-HT-A615    TCGA-HT-A616 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A617    TCGA-HT-A618    TCGA-HT-A619    TCGA-HT-A61A    TCGA-HT-A61B 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A74H    TCGA-HT-A74J    TCGA-HT-A74L    TCGA-HT-A74O    TCGA-HW-7486 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-7487    TCGA-HW-7489    TCGA-HW-7490    TCGA-HW-7491    TCGA-HW-7493 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-7495    TCGA-HW-8319    TCGA-HW-8320    TCGA-HW-8321    TCGA-HW-8322 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-A5KJ    TCGA-HW-A5KK    TCGA-HW-A5KM    TCGA-IK-7675    TCGA-IK-8125 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-KT-A74X    TCGA-P5-A5ET    TCGA-P5-A5EU    TCGA-P5-A5EV    TCGA-P5-A5EW 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A5EX    TCGA-P5-A5EY    TCGA-P5-A5EZ    TCGA-P5-A5F0    TCGA-P5-A5F1 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A5F2    TCGA-P5-A5F4    TCGA-P5-A5F6    TCGA-P5-A72U    TCGA-P5-A72W 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A72X    TCGA-P5-A72Z    TCGA-P5-A730    TCGA-P5-A731    TCGA-P5-A733 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A735    TCGA-P5-A736    TCGA-P5-A737    TCGA-P5-A77W    TCGA-P5-A77X 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A780    TCGA-P5-A781    TCGA-QH-A65S    TCGA-QH-A65V    TCGA-QH-A65X 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A65Z    TCGA-QH-A6CS    TCGA-QH-A6CU    TCGA-QH-A6CV    TCGA-QH-A6CW 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6CX    TCGA-QH-A6CY    TCGA-QH-A6CZ    TCGA-QH-A6X4    TCGA-QH-A6X5 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6X8    TCGA-QH-A6X9    TCGA-QH-A6XA    TCGA-QH-A6XC    TCGA-QH-A86X 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A870    TCGA-R8-A6MK    TCGA-R8-A6ML    TCGA-R8-A6MO    TCGA-R8-A6YH 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-RY-A83X    TCGA-RY-A83Y    TCGA-RY-A83Z    TCGA-RY-A843    TCGA-RY-A845 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6TS    TCGA-S9-A6TU    TCGA-S9-A6TV    TCGA-S9-A6TX    TCGA-S9-A6TY 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6U0    TCGA-S9-A6U1    TCGA-S9-A6U5    TCGA-S9-A6U6    TCGA-S9-A6U9 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6WD    TCGA-S9-A6WE    TCGA-S9-A6WG    TCGA-S9-A6WH    TCGA-S9-A6WN 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6WP    TCGA-S9-A6WQ    TCGA-S9-A7IQ    TCGA-S9-A7IS    TCGA-S9-A7IY 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7IZ    TCGA-S9-A7J0    TCGA-S9-A7J1    TCGA-S9-A7J2    TCGA-S9-A7QX 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7QZ    TCGA-S9-A7R1    TCGA-S9-A7R4    TCGA-S9-A7R8    TCGA-TM-A7C5 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84R    TCGA-TM-A84S    TCGA-TQ-A7RF    TCGA-TQ-A7RG    TCGA-TQ-A7RH 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RK    TCGA-TQ-A7RN    TCGA-TQ-A7RQ    TCGA-TQ-A7RR    TCGA-TQ-A7RS 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RW    TCGA-TQ-A8XE    TCGA-VM-A8C8    TCGA-VM-A8C9    TCGA-VM-A8CA 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VM-A8CB    TCGA-VM-A8CD    TCGA-VM-A8CE    TCGA-VM-A8CH    TCGA-VV-A829 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VV-A86M    TCGA-VW-A7QS    TCGA-W9-A837    TCGA-WY-A85B    TCGA-WY-A85C 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-WY-A85D 
"CDA WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CDA MUTATED        1      1      0
  CDA WILD-TYPE    237    190    228
D147V9, multiclass
[1] "Remove cluster labels:" "CDA MUTATED"           
clus
  CDA MUTATED CDA WILD-TYPE 
            2           655 
   TCGA-02-0047    TCGA-02-0055    TCGA-02-2483    TCGA-02-2485    TCGA-02-2486 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0129    TCGA-06-0130    TCGA-06-0132    TCGA-06-0141    TCGA-06-0157 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0158    TCGA-06-0168    TCGA-06-0174    TCGA-06-0178    TCGA-06-0184 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0219    TCGA-06-0238    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744    TCGA-06-0745 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0878    TCGA-06-0882 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-1804    TCGA-06-2557    TCGA-06-2558    TCGA-06-2559    TCGA-06-2561 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-2562    TCGA-06-2563    TCGA-06-2564    TCGA-06-2565    TCGA-06-2567 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-2569    TCGA-06-2570    TCGA-06-5408    TCGA-06-5410    TCGA-06-5411 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5412    TCGA-06-5413    TCGA-06-5414    TCGA-06-5415    TCGA-06-5417 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5418    TCGA-06-5856    TCGA-06-5858    TCGA-06-5859    TCGA-08-0386 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-12-0616    TCGA-12-0618    TCGA-12-0619    TCGA-12-0821    TCGA-12-1597 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-12-3650    TCGA-12-3652    TCGA-12-3653    TCGA-12-5295    TCGA-12-5299 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-0781    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0817 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-1823    TCGA-14-1825    TCGA-14-1829    TCGA-14-2554    TCGA-15-0742 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-15-1444    TCGA-16-0846    TCGA-16-1045    TCGA-19-1390    TCGA-19-2619 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-2620    TCGA-19-2624    TCGA-19-2625    TCGA-19-2629    TCGA-19-5960 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-26-5136    TCGA-26-5139    TCGA-27-1830    TCGA-27-1831    TCGA-27-1832 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-1834    TCGA-27-1835    TCGA-27-1837    TCGA-27-2519    TCGA-27-2521 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-2523    TCGA-27-2524    TCGA-27-2526    TCGA-27-2528    TCGA-28-1747 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-1753    TCGA-28-2499    TCGA-28-2509    TCGA-28-2510    TCGA-28-2513 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-2514    TCGA-28-5204    TCGA-28-5207    TCGA-28-5208    TCGA-28-5209 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-5213    TCGA-28-5215    TCGA-28-5216    TCGA-28-5218    TCGA-28-5220 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-1970    TCGA-32-1980    TCGA-32-1982    TCGA-32-2615    TCGA-32-2632 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-2634    TCGA-32-2638    TCGA-32-5222    TCGA-41-2571    TCGA-41-2572 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-41-3915    TCGA-41-4097    TCGA-41-5651    TCGA-76-4925    TCGA-76-4926 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-4927    TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5280    TCGA-DB-5281 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A4X9    TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A4XE    TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A64O    TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A64U    TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A75L    TCGA-DB-A75M    TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-5141    TCGA-DH-5142    TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-A66B    TCGA-DH-A66D    TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-A7US    TCGA-DH-A7UT    TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-5849    TCGA-DU-5851    TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-5855    TCGA-DU-5870    TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6392    TCGA-DU-6393    TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6397    TCGA-DU-6399    TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6403    TCGA-DU-6404    TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6408    TCGA-DU-6410    TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7008    TCGA-DU-7009    TCGA-DU-7010    TCGA-DU-7011    TCGA-DU-7012 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7013    TCGA-DU-7014    TCGA-DU-7015    TCGA-DU-7018    TCGA-DU-7019 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7290    TCGA-DU-7292    TCGA-DU-7294    TCGA-DU-7298    TCGA-DU-7299 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302    TCGA-DU-7304    TCGA-DU-7306 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161    TCGA-DU-8162    TCGA-DU-8163 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8166    TCGA-DU-8167    TCGA-DU-8168 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS    TCGA-DU-A5TT    TCGA-DU-A5TU 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2    TCGA-DU-A6S3    TCGA-DU-A6S6 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K    TCGA-DU-A76L    TCGA-DU-A76O 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8    TCGA-DU-A7TA    TCGA-DU-A7TB 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A7TC    TCGA-DU-A7TD    TCGA-DU-A7TG    TCGA-DU-A7TI    TCGA-DU-A7TJ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-5302    TCGA-E1-5303    TCGA-E1-5304    TCGA-E1-5305    TCGA-E1-5307 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-5311    TCGA-E1-5318    TCGA-E1-5319    TCGA-E1-5322    TCGA-E1-A7YD 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YE    TCGA-E1-A7YH    TCGA-E1-A7YI    TCGA-E1-A7YJ    TCGA-E1-A7YK 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YL    TCGA-E1-A7YM    TCGA-E1-A7YN    TCGA-E1-A7YO    TCGA-E1-A7YQ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YS    TCGA-E1-A7YU    TCGA-E1-A7YV    TCGA-E1-A7YW    TCGA-E1-A7YY 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7Z2    TCGA-E1-A7Z3    TCGA-E1-A7Z4    TCGA-E1-A7Z6    TCGA-EZ-7264 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-F6-A8O3    TCGA-F6-A8O4    TCGA-FG-5962    TCGA-FG-5963    TCGA-FG-5964 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-5965    TCGA-FG-6688    TCGA-FG-6689    TCGA-FG-6690    TCGA-FG-6691 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-6692    TCGA-FG-7634    TCGA-FG-7636    TCGA-FG-7637    TCGA-FG-7638 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-7641    TCGA-FG-7643    TCGA-FG-8181    TCGA-FG-8182    TCGA-FG-8185 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-8186    TCGA-FG-8187    TCGA-FG-8188    TCGA-FG-8189    TCGA-FG-8191 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A4MT    TCGA-FG-A4MU    TCGA-FG-A4MW    TCGA-FG-A4MX    TCGA-FG-A4MY 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A60J    TCGA-FG-A60K    TCGA-FG-A60L    TCGA-FG-A6IZ    TCGA-FG-A6J1 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A6J3    TCGA-FG-A70Y    TCGA-FG-A70Z    TCGA-FG-A710    TCGA-FG-A711 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A713    TCGA-FG-A87N    TCGA-FG-A87Q    TCGA-FN-7833    TCGA-HT-7467 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7468    TCGA-HT-7469    TCGA-HT-7470    TCGA-HT-7471    TCGA-HT-7472 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7473    TCGA-HT-7474    TCGA-HT-7475    TCGA-HT-7476    TCGA-HT-7477 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7478    TCGA-HT-7479    TCGA-HT-7480    TCGA-HT-7481    TCGA-HT-7482 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7483    TCGA-HT-7485    TCGA-HT-7601    TCGA-HT-7602    TCGA-HT-7603 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7604    TCGA-HT-7605    TCGA-HT-7606    TCGA-HT-7607    TCGA-HT-7608 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7609    TCGA-HT-7610    TCGA-HT-7611    TCGA-HT-7616    TCGA-HT-7620 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7676    TCGA-HT-7677    TCGA-HT-7680    TCGA-HT-7681    TCGA-HT-7684 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7686    TCGA-HT-7687    TCGA-HT-7688    TCGA-HT-7689    TCGA-HT-7690 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7691    TCGA-HT-7692    TCGA-HT-7693    TCGA-HT-7694    TCGA-HT-7695 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7854    TCGA-HT-7855    TCGA-HT-7856    TCGA-HT-7857    TCGA-HT-7858 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7860    TCGA-HT-7873    TCGA-HT-7874    TCGA-HT-7875    TCGA-HT-7877 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7879    TCGA-HT-7880    TCGA-HT-7881    TCGA-HT-7882    TCGA-HT-7884 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7902    TCGA-HT-8010    TCGA-HT-8011    TCGA-HT-8012    TCGA-HT-8013 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8015    TCGA-HT-8018    TCGA-HT-8019    TCGA-HT-8104    TCGA-HT-8105 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8106    TCGA-HT-8107    TCGA-HT-8108    TCGA-HT-8109    TCGA-HT-8110 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8111    TCGA-HT-8113    TCGA-HT-8114    TCGA-HT-8558    TCGA-HT-8563 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8564    TCGA-HT-A4DS    TCGA-HT-A4DV    TCGA-HT-A5R5    TCGA-HT-A5R7 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A5R9    TCGA-HT-A5RA    TCGA-HT-A5RB    TCGA-HT-A5RC    TCGA-HT-A614 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A615    TCGA-HT-A616    TCGA-HT-A617    TCGA-HT-A618    TCGA-HT-A619 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A61A    TCGA-HT-A61B    TCGA-HT-A61C    TCGA-HT-A74H    TCGA-HT-A74J 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A74K    TCGA-HT-A74L    TCGA-HT-A74O    TCGA-HW-7486    TCGA-HW-7487 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-7489    TCGA-HW-7490    TCGA-HW-7491    TCGA-HW-7493    TCGA-HW-7495 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-8319    TCGA-HW-8320    TCGA-HW-8321    TCGA-HW-8322    TCGA-HW-A5KJ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-A5KK    TCGA-HW-A5KL    TCGA-HW-A5KM    TCGA-IK-7675    TCGA-IK-8125 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-KT-A74X    TCGA-KT-A7W1    TCGA-P5-A5ET    TCGA-P5-A5EU    TCGA-P5-A5EV 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A5EW    TCGA-P5-A5EX    TCGA-P5-A5EY    TCGA-P5-A5EZ    TCGA-P5-A5F0 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A5F1    TCGA-P5-A5F2    TCGA-P5-A5F4    TCGA-P5-A5F6    TCGA-P5-A72U 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A72W    TCGA-P5-A72X    TCGA-P5-A72Z    TCGA-P5-A730    TCGA-P5-A731 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A733    TCGA-P5-A735    TCGA-P5-A736    TCGA-P5-A737    TCGA-P5-A77W 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A77X    TCGA-P5-A780    TCGA-P5-A781    TCGA-QH-A65R    TCGA-QH-A65S 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A65V    TCGA-QH-A65X    TCGA-QH-A65Z    TCGA-QH-A6CS    TCGA-QH-A6CU 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6CV    TCGA-QH-A6CW    TCGA-QH-A6CX    TCGA-QH-A6CY    TCGA-QH-A6CZ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6X3    TCGA-QH-A6X4    TCGA-QH-A6X5    TCGA-QH-A6X8    TCGA-QH-A6X9 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6XA    TCGA-QH-A6XC    TCGA-QH-A86X    TCGA-QH-A870    TCGA-R8-A6MK 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-R8-A6ML    TCGA-R8-A6MO    TCGA-R8-A6YH    TCGA-R8-A73M    TCGA-RY-A83X 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-RY-A83Y    TCGA-RY-A83Z    TCGA-RY-A840    TCGA-RY-A843    TCGA-RY-A845 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-RY-A847    TCGA-S9-A6TS    TCGA-S9-A6TU    TCGA-S9-A6TV    TCGA-S9-A6TW 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6TX    TCGA-S9-A6TY    TCGA-S9-A6TZ    TCGA-S9-A6U0    TCGA-S9-A6U1 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6U2    TCGA-S9-A6U5    TCGA-S9-A6U6    TCGA-S9-A6U8    TCGA-S9-A6U9 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6UA    TCGA-S9-A6UB    TCGA-S9-A6WD    TCGA-S9-A6WE    TCGA-S9-A6WG 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6WH    TCGA-S9-A6WI    TCGA-S9-A6WL    TCGA-S9-A6WM    TCGA-S9-A6WN 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6WO    TCGA-S9-A6WP    TCGA-S9-A6WQ    TCGA-S9-A7IQ    TCGA-S9-A7IS 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7IX    TCGA-S9-A7IY    TCGA-S9-A7IZ    TCGA-S9-A7J0    TCGA-S9-A7J1 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7J2    TCGA-S9-A7J3    TCGA-S9-A7QW    TCGA-S9-A7QX    TCGA-S9-A7QY 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7QZ    TCGA-S9-A7R1    TCGA-S9-A7R2    TCGA-S9-A7R3    TCGA-S9-A7R4 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7R7    TCGA-S9-A7R8    TCGA-S9-A89V    TCGA-S9-A89Z    TCGA-TM-A7C3 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A7C4    TCGA-TM-A7C5    TCGA-TM-A7CA    TCGA-TM-A7CF    TCGA-TM-A84B 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84C    TCGA-TM-A84F    TCGA-TM-A84G    TCGA-TM-A84H    TCGA-TM-A84I 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84J    TCGA-TM-A84L    TCGA-TM-A84M    TCGA-TM-A84O    TCGA-TM-A84Q 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84R    TCGA-TM-A84S    TCGA-TM-A84T    TCGA-TQ-A7RF    TCGA-TQ-A7RG 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RH    TCGA-TQ-A7RI    TCGA-TQ-A7RJ    TCGA-TQ-A7RK    TCGA-TQ-A7RM 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RN    TCGA-TQ-A7RO    TCGA-TQ-A7RP    TCGA-TQ-A7RQ    TCGA-TQ-A7RR 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RS    TCGA-TQ-A7RU    TCGA-TQ-A7RW    TCGA-TQ-A8XE    TCGA-VM-A8C8 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VM-A8C9    TCGA-VM-A8CA    TCGA-VM-A8CB    TCGA-VM-A8CD    TCGA-VM-A8CE 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VM-A8CF    TCGA-VM-A8CH    TCGA-VV-A829    TCGA-VV-A86M    TCGA-VW-A7QS 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VW-A8FI    TCGA-W9-A837    TCGA-WH-A86K    TCGA-WY-A858    TCGA-WY-A859 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-WY-A85A    TCGA-WY-A85B    TCGA-WY-A85C    TCGA-WY-A85D    TCGA-WY-A85E 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CDA MUTATED        1      0      1
  CDA WILD-TYPE    195    191    269
D147V10, multiclass
[1] "Remove cluster labels:" "CDA MUTATED"           
clus
  CDA MUTATED CDA WILD-TYPE 
            2           655 
   TCGA-02-0047    TCGA-02-0055    TCGA-02-2483    TCGA-02-2485    TCGA-02-2486 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0129    TCGA-06-0130    TCGA-06-0132    TCGA-06-0141    TCGA-06-0157 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0158    TCGA-06-0168    TCGA-06-0174    TCGA-06-0178    TCGA-06-0184 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0219    TCGA-06-0238    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0686    TCGA-06-0743    TCGA-06-0744    TCGA-06-0745 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0878    TCGA-06-0882 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-1804    TCGA-06-2557    TCGA-06-2558    TCGA-06-2559    TCGA-06-2561 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-2562    TCGA-06-2563    TCGA-06-2564    TCGA-06-2565    TCGA-06-2567 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-2569    TCGA-06-2570    TCGA-06-5408    TCGA-06-5410    TCGA-06-5411 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5412    TCGA-06-5413    TCGA-06-5414    TCGA-06-5415    TCGA-06-5417 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-06-5418    TCGA-06-5856    TCGA-06-5858    TCGA-06-5859    TCGA-08-0386 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-12-0616    TCGA-12-0618    TCGA-12-0619    TCGA-12-0821    TCGA-12-1597 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-12-3650    TCGA-12-3652    TCGA-12-3653    TCGA-12-5295    TCGA-12-5299 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-0781    TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0817 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-14-1823    TCGA-14-1825    TCGA-14-1829    TCGA-14-2554    TCGA-15-0742 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-15-1444    TCGA-16-0846    TCGA-16-1045    TCGA-19-1390    TCGA-19-2619 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-19-2620    TCGA-19-2624    TCGA-19-2625    TCGA-19-2629    TCGA-19-5960 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-26-1442    TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-26-5136    TCGA-26-5139    TCGA-27-1830    TCGA-27-1831    TCGA-27-1832 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-1834    TCGA-27-1835    TCGA-27-1837    TCGA-27-2519    TCGA-27-2521 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-27-2523    TCGA-27-2524    TCGA-27-2526    TCGA-27-2528    TCGA-28-1747 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-1753    TCGA-28-2499    TCGA-28-2509    TCGA-28-2510    TCGA-28-2513 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-2514    TCGA-28-5204    TCGA-28-5207    TCGA-28-5208    TCGA-28-5209 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-28-5213    TCGA-28-5215    TCGA-28-5216    TCGA-28-5218    TCGA-28-5220 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-1970    TCGA-32-1980    TCGA-32-1982    TCGA-32-2615    TCGA-32-2632 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-32-2634    TCGA-32-2638    TCGA-32-5222    TCGA-41-2571    TCGA-41-2572 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-41-3915    TCGA-41-4097    TCGA-41-5651    TCGA-76-4925    TCGA-76-4926 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-76-4927    TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5280    TCGA-DB-5281 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A4X9    TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A4XE    TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A64O    TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A64U    TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A75L    TCGA-DB-A75M    TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-5141    TCGA-DH-5142    TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-A66B    TCGA-DH-A66D    TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-A7US    TCGA-DH-A7UT    TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-5849    TCGA-DU-5851    TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-5855    TCGA-DU-5870    TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6392    TCGA-DU-6393    TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6397    TCGA-DU-6399    TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6403    TCGA-DU-6404    TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6408    TCGA-DU-6410    TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7008    TCGA-DU-7009    TCGA-DU-7010    TCGA-DU-7011    TCGA-DU-7012 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7013    TCGA-DU-7014    TCGA-DU-7015    TCGA-DU-7018    TCGA-DU-7019 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7290    TCGA-DU-7292    TCGA-DU-7294    TCGA-DU-7298    TCGA-DU-7299 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302    TCGA-DU-7304    TCGA-DU-7306 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161    TCGA-DU-8162    TCGA-DU-8163 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8166    TCGA-DU-8167    TCGA-DU-8168 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS    TCGA-DU-A5TT    TCGA-DU-A5TU 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2    TCGA-DU-A6S3    TCGA-DU-A6S6 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K    TCGA-DU-A76L    TCGA-DU-A76O 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8    TCGA-DU-A7TA    TCGA-DU-A7TB 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A7TC    TCGA-DU-A7TD    TCGA-DU-A7TG    TCGA-DU-A7TI    TCGA-DU-A7TJ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-5302    TCGA-E1-5303    TCGA-E1-5304    TCGA-E1-5305    TCGA-E1-5307 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-5311    TCGA-E1-5318    TCGA-E1-5319    TCGA-E1-5322    TCGA-E1-A7YD 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YE    TCGA-E1-A7YH    TCGA-E1-A7YI    TCGA-E1-A7YJ    TCGA-E1-A7YK 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YL    TCGA-E1-A7YM    TCGA-E1-A7YN    TCGA-E1-A7YO    TCGA-E1-A7YQ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YS    TCGA-E1-A7YU    TCGA-E1-A7YV    TCGA-E1-A7YW    TCGA-E1-A7YY 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7Z2    TCGA-E1-A7Z3    TCGA-E1-A7Z4    TCGA-E1-A7Z6    TCGA-EZ-7264 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-F6-A8O3    TCGA-F6-A8O4    TCGA-FG-5962    TCGA-FG-5963    TCGA-FG-5964 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-5965    TCGA-FG-6688    TCGA-FG-6689    TCGA-FG-6690    TCGA-FG-6691 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-6692    TCGA-FG-7634    TCGA-FG-7636    TCGA-FG-7637    TCGA-FG-7638 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-7641    TCGA-FG-7643    TCGA-FG-8181    TCGA-FG-8182    TCGA-FG-8185 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-8186    TCGA-FG-8187    TCGA-FG-8188    TCGA-FG-8189    TCGA-FG-8191 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A4MT    TCGA-FG-A4MU    TCGA-FG-A4MW    TCGA-FG-A4MX    TCGA-FG-A4MY 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A60J    TCGA-FG-A60K    TCGA-FG-A60L    TCGA-FG-A6IZ    TCGA-FG-A6J1 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A6J3    TCGA-FG-A70Y    TCGA-FG-A70Z    TCGA-FG-A710    TCGA-FG-A711 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A713    TCGA-FG-A87N    TCGA-FG-A87Q    TCGA-FN-7833    TCGA-HT-7467 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7468    TCGA-HT-7469    TCGA-HT-7470    TCGA-HT-7471    TCGA-HT-7472 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7473    TCGA-HT-7474    TCGA-HT-7475    TCGA-HT-7476    TCGA-HT-7477 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7478    TCGA-HT-7479    TCGA-HT-7480    TCGA-HT-7481    TCGA-HT-7482 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7483    TCGA-HT-7485    TCGA-HT-7601    TCGA-HT-7602    TCGA-HT-7603 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7604    TCGA-HT-7605    TCGA-HT-7606    TCGA-HT-7607    TCGA-HT-7608 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7609    TCGA-HT-7610    TCGA-HT-7611    TCGA-HT-7616    TCGA-HT-7620 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7676    TCGA-HT-7677    TCGA-HT-7680    TCGA-HT-7681    TCGA-HT-7684 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7686    TCGA-HT-7687    TCGA-HT-7688    TCGA-HT-7689    TCGA-HT-7690 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7691    TCGA-HT-7692    TCGA-HT-7693    TCGA-HT-7694    TCGA-HT-7695 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7854    TCGA-HT-7855    TCGA-HT-7856    TCGA-HT-7857    TCGA-HT-7858 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7860    TCGA-HT-7873    TCGA-HT-7874    TCGA-HT-7875    TCGA-HT-7877 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7879    TCGA-HT-7880    TCGA-HT-7881    TCGA-HT-7882    TCGA-HT-7884 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7902    TCGA-HT-8010    TCGA-HT-8011    TCGA-HT-8012    TCGA-HT-8013 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8015    TCGA-HT-8018    TCGA-HT-8019    TCGA-HT-8104    TCGA-HT-8105 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8106    TCGA-HT-8107    TCGA-HT-8108    TCGA-HT-8109    TCGA-HT-8110 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8111    TCGA-HT-8113    TCGA-HT-8114    TCGA-HT-8558    TCGA-HT-8563 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8564    TCGA-HT-A4DS    TCGA-HT-A4DV    TCGA-HT-A5R5    TCGA-HT-A5R7 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A5R9    TCGA-HT-A5RA    TCGA-HT-A5RB    TCGA-HT-A5RC    TCGA-HT-A614 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A615    TCGA-HT-A616    TCGA-HT-A617    TCGA-HT-A618    TCGA-HT-A619 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A61A    TCGA-HT-A61B    TCGA-HT-A61C    TCGA-HT-A74H    TCGA-HT-A74J 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A74K    TCGA-HT-A74L    TCGA-HT-A74O    TCGA-HW-7486    TCGA-HW-7487 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-7489    TCGA-HW-7490    TCGA-HW-7491    TCGA-HW-7493    TCGA-HW-7495 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-8319    TCGA-HW-8320    TCGA-HW-8321    TCGA-HW-8322    TCGA-HW-A5KJ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-A5KK    TCGA-HW-A5KL    TCGA-HW-A5KM    TCGA-IK-7675    TCGA-IK-8125 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-KT-A74X    TCGA-KT-A7W1    TCGA-P5-A5ET    TCGA-P5-A5EU    TCGA-P5-A5EV 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A5EW    TCGA-P5-A5EX    TCGA-P5-A5EY    TCGA-P5-A5EZ    TCGA-P5-A5F0 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A5F1    TCGA-P5-A5F2    TCGA-P5-A5F4    TCGA-P5-A5F6    TCGA-P5-A72U 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A72W    TCGA-P5-A72X    TCGA-P5-A72Z    TCGA-P5-A730    TCGA-P5-A731 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A733    TCGA-P5-A735    TCGA-P5-A736    TCGA-P5-A737    TCGA-P5-A77W 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A77X    TCGA-P5-A780    TCGA-P5-A781    TCGA-QH-A65R    TCGA-QH-A65S 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A65V    TCGA-QH-A65X    TCGA-QH-A65Z    TCGA-QH-A6CS    TCGA-QH-A6CU 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6CV    TCGA-QH-A6CW    TCGA-QH-A6CX    TCGA-QH-A6CY    TCGA-QH-A6CZ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6X3    TCGA-QH-A6X4    TCGA-QH-A6X5    TCGA-QH-A6X8    TCGA-QH-A6X9 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6XA    TCGA-QH-A6XC    TCGA-QH-A86X    TCGA-QH-A870    TCGA-R8-A6MK 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-R8-A6ML    TCGA-R8-A6MO    TCGA-R8-A6YH    TCGA-R8-A73M    TCGA-RY-A83X 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-RY-A83Y    TCGA-RY-A83Z    TCGA-RY-A840    TCGA-RY-A843    TCGA-RY-A845 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-RY-A847    TCGA-S9-A6TS    TCGA-S9-A6TU    TCGA-S9-A6TV    TCGA-S9-A6TW 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6TX    TCGA-S9-A6TY    TCGA-S9-A6TZ    TCGA-S9-A6U0    TCGA-S9-A6U1 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6U2    TCGA-S9-A6U5    TCGA-S9-A6U6    TCGA-S9-A6U8    TCGA-S9-A6U9 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6UA    TCGA-S9-A6UB    TCGA-S9-A6WD    TCGA-S9-A6WE    TCGA-S9-A6WG 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6WH    TCGA-S9-A6WI    TCGA-S9-A6WL    TCGA-S9-A6WM    TCGA-S9-A6WN 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6WO    TCGA-S9-A6WP    TCGA-S9-A6WQ    TCGA-S9-A7IQ    TCGA-S9-A7IS 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7IX    TCGA-S9-A7IY    TCGA-S9-A7IZ    TCGA-S9-A7J0    TCGA-S9-A7J1 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7J2    TCGA-S9-A7J3    TCGA-S9-A7QW    TCGA-S9-A7QX    TCGA-S9-A7QY 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7QZ    TCGA-S9-A7R1    TCGA-S9-A7R2    TCGA-S9-A7R3    TCGA-S9-A7R4 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7R7    TCGA-S9-A7R8    TCGA-S9-A89V    TCGA-S9-A89Z    TCGA-TM-A7C3 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A7C4    TCGA-TM-A7C5    TCGA-TM-A7CA    TCGA-TM-A7CF    TCGA-TM-A84B 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84C    TCGA-TM-A84F    TCGA-TM-A84G    TCGA-TM-A84H    TCGA-TM-A84I 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84J    TCGA-TM-A84L    TCGA-TM-A84M    TCGA-TM-A84O    TCGA-TM-A84Q 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84R    TCGA-TM-A84S    TCGA-TM-A84T    TCGA-TQ-A7RF    TCGA-TQ-A7RG 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RH    TCGA-TQ-A7RI    TCGA-TQ-A7RJ    TCGA-TQ-A7RK    TCGA-TQ-A7RM 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RN    TCGA-TQ-A7RO    TCGA-TQ-A7RP    TCGA-TQ-A7RQ    TCGA-TQ-A7RR 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RS    TCGA-TQ-A7RU    TCGA-TQ-A7RW    TCGA-TQ-A8XE    TCGA-VM-A8C8 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VM-A8C9    TCGA-VM-A8CA    TCGA-VM-A8CB    TCGA-VM-A8CD    TCGA-VM-A8CE 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VM-A8CF    TCGA-VM-A8CH    TCGA-VV-A829    TCGA-VV-A86M    TCGA-VW-A7QS 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VW-A8FI    TCGA-W9-A837    TCGA-WH-A86K    TCGA-WY-A858    TCGA-WY-A859 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-WY-A85A    TCGA-WY-A85B    TCGA-WY-A85C    TCGA-WY-A85D    TCGA-WY-A85E 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDA MUTATED        0      0      0      1
  CDA WILD-TYPE    140    107     83    181
D147V11, multiclass
[1] "Remove cluster labels:" "CDA MUTATED"           
clus
  CDA MUTATED CDA WILD-TYPE 
            1           511 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5280    TCGA-DB-5281 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A4X9    TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A4XE    TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A64O    TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A64U    TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A75L    TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-5142    TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-A66D    TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-A7UT    TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-5851    TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-5870    TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6393    TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6399    TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6404    TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6410    TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7009    TCGA-DU-7010    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7014 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7015    TCGA-DU-7018    TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7292 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7294    TCGA-DU-7298    TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7302    TCGA-DU-7304    TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-8161    TCGA-DU-8162    TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-8166    TCGA-DU-8167    TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A5TS    TCGA-DU-A5TT    TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A6S2    TCGA-DU-A6S3    TCGA-DU-A6S6    TCGA-DU-A6S7    TCGA-DU-A6S8 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A76K    TCGA-DU-A76L    TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A7T8    TCGA-DU-A7TA    TCGA-DU-A7TB    TCGA-DU-A7TC    TCGA-DU-A7TD 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A7TG    TCGA-DU-A7TI    TCGA-DU-A7TJ    TCGA-E1-5302    TCGA-E1-5303 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-5304    TCGA-E1-5305    TCGA-E1-5307    TCGA-E1-5311    TCGA-E1-5318 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-5319    TCGA-E1-5322    TCGA-E1-A7YD    TCGA-E1-A7YE    TCGA-E1-A7YH 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YI    TCGA-E1-A7YJ    TCGA-E1-A7YK    TCGA-E1-A7YL    TCGA-E1-A7YM 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YN    TCGA-E1-A7YO    TCGA-E1-A7YQ    TCGA-E1-A7YS    TCGA-E1-A7YU 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YV    TCGA-E1-A7YW    TCGA-E1-A7YY    TCGA-E1-A7Z2    TCGA-E1-A7Z3 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7Z4    TCGA-E1-A7Z6    TCGA-EZ-7264    TCGA-F6-A8O3    TCGA-F6-A8O4 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-5962    TCGA-FG-5963    TCGA-FG-5964    TCGA-FG-5965    TCGA-FG-6688 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-6689    TCGA-FG-6690    TCGA-FG-6691    TCGA-FG-6692    TCGA-FG-7634 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-7636    TCGA-FG-7637    TCGA-FG-7638    TCGA-FG-7641    TCGA-FG-7643 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-8181    TCGA-FG-8182    TCGA-FG-8185    TCGA-FG-8186    TCGA-FG-8187 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-8188    TCGA-FG-8189    TCGA-FG-8191    TCGA-FG-A4MT    TCGA-FG-A4MU 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A4MW    TCGA-FG-A4MX    TCGA-FG-A4MY    TCGA-FG-A60J    TCGA-FG-A60K 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A60L    TCGA-FG-A6IZ    TCGA-FG-A6J1    TCGA-FG-A6J3    TCGA-FG-A70Y 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A70Z    TCGA-FG-A710    TCGA-FG-A711    TCGA-FG-A713    TCGA-FG-A87N 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A87Q    TCGA-FN-7833    TCGA-HT-7467    TCGA-HT-7468    TCGA-HT-7469 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7470    TCGA-HT-7471    TCGA-HT-7472    TCGA-HT-7473    TCGA-HT-7474 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7475    TCGA-HT-7476    TCGA-HT-7477    TCGA-HT-7478    TCGA-HT-7479 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7480    TCGA-HT-7481    TCGA-HT-7482    TCGA-HT-7483    TCGA-HT-7485 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7601    TCGA-HT-7602    TCGA-HT-7603    TCGA-HT-7604    TCGA-HT-7605 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7606    TCGA-HT-7607    TCGA-HT-7608    TCGA-HT-7609    TCGA-HT-7610 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7611    TCGA-HT-7616    TCGA-HT-7620    TCGA-HT-7676    TCGA-HT-7677 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7680    TCGA-HT-7681    TCGA-HT-7684    TCGA-HT-7686    TCGA-HT-7687 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7688    TCGA-HT-7689    TCGA-HT-7690    TCGA-HT-7691    TCGA-HT-7692 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7693    TCGA-HT-7694    TCGA-HT-7695    TCGA-HT-7854    TCGA-HT-7855 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7856    TCGA-HT-7857    TCGA-HT-7858    TCGA-HT-7860    TCGA-HT-7873 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7874    TCGA-HT-7875    TCGA-HT-7877    TCGA-HT-7879    TCGA-HT-7880 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7881    TCGA-HT-7882    TCGA-HT-7884    TCGA-HT-7902    TCGA-HT-8010 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8011    TCGA-HT-8012    TCGA-HT-8013    TCGA-HT-8015    TCGA-HT-8018 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8019    TCGA-HT-8104    TCGA-HT-8105    TCGA-HT-8106    TCGA-HT-8107 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8108    TCGA-HT-8109    TCGA-HT-8110    TCGA-HT-8111    TCGA-HT-8113 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8114    TCGA-HT-8558    TCGA-HT-8563    TCGA-HT-8564    TCGA-HT-A4DS 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A4DV    TCGA-HT-A5R5    TCGA-HT-A5R7    TCGA-HT-A5R9    TCGA-HT-A5RA 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A5RB    TCGA-HT-A5RC    TCGA-HT-A614    TCGA-HT-A615    TCGA-HT-A616 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A617    TCGA-HT-A618    TCGA-HT-A619    TCGA-HT-A61A    TCGA-HT-A61B 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A61C    TCGA-HT-A74H    TCGA-HT-A74K    TCGA-HT-A74L    TCGA-HT-A74O 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-7486    TCGA-HW-7487    TCGA-HW-7489    TCGA-HW-7490    TCGA-HW-7491 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-7493    TCGA-HW-7495    TCGA-HW-8319    TCGA-HW-8320    TCGA-HW-8321 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-8322    TCGA-HW-A5KJ    TCGA-HW-A5KK    TCGA-HW-A5KL    TCGA-HW-A5KM 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-IK-7675    TCGA-IK-8125    TCGA-KT-A74X    TCGA-KT-A7W1    TCGA-P5-A5ET 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A5EU    TCGA-P5-A5EV    TCGA-P5-A5EW    TCGA-P5-A5EX    TCGA-P5-A5EY 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A5EZ    TCGA-P5-A5F0    TCGA-P5-A5F1    TCGA-P5-A5F2    TCGA-P5-A5F4 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A5F6    TCGA-P5-A72U    TCGA-P5-A72W    TCGA-P5-A72X    TCGA-P5-A72Z 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A730    TCGA-P5-A731    TCGA-P5-A733    TCGA-P5-A735    TCGA-P5-A736 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A737    TCGA-P5-A77W    TCGA-P5-A77X    TCGA-P5-A780    TCGA-P5-A781 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A65R    TCGA-QH-A65S    TCGA-QH-A65V    TCGA-QH-A65X    TCGA-QH-A65Z 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6CS    TCGA-QH-A6CU    TCGA-QH-A6CV    TCGA-QH-A6CX    TCGA-QH-A6CY 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6CZ    TCGA-QH-A6X3    TCGA-QH-A6X4    TCGA-QH-A6X5    TCGA-QH-A6X8 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6X9    TCGA-QH-A6XA    TCGA-QH-A6XC    TCGA-QH-A86X    TCGA-QH-A870 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-R8-A6MK    TCGA-R8-A6ML    TCGA-R8-A6MO    TCGA-R8-A6YH    TCGA-R8-A73M 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-RY-A83X    TCGA-RY-A83Y    TCGA-RY-A83Z    TCGA-RY-A840    TCGA-RY-A843 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-RY-A845    TCGA-RY-A847    TCGA-S9-A6TS    TCGA-S9-A6TU    TCGA-S9-A6TV 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6TW    TCGA-S9-A6TX    TCGA-S9-A6TY    TCGA-S9-A6TZ    TCGA-S9-A6U0 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6U1    TCGA-S9-A6U2    TCGA-S9-A6U5    TCGA-S9-A6U6    TCGA-S9-A6U8 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6U9    TCGA-S9-A6UA    TCGA-S9-A6UB    TCGA-S9-A6WD    TCGA-S9-A6WE 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6WG    TCGA-S9-A6WH    TCGA-S9-A6WI    TCGA-S9-A6WL    TCGA-S9-A6WM 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6WN    TCGA-S9-A6WO    TCGA-S9-A6WP    TCGA-S9-A6WQ    TCGA-S9-A7IQ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7IS    TCGA-S9-A7IX    TCGA-S9-A7IY    TCGA-S9-A7IZ    TCGA-S9-A7J0 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7J1    TCGA-S9-A7J2    TCGA-S9-A7J3    TCGA-S9-A7QW    TCGA-S9-A7QX 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7QY    TCGA-S9-A7QZ    TCGA-S9-A7R1    TCGA-S9-A7R2    TCGA-S9-A7R3 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7R4    TCGA-S9-A7R7    TCGA-S9-A7R8    TCGA-S9-A89V    TCGA-S9-A89Z 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A7C3    TCGA-TM-A7C4    TCGA-TM-A7C5    TCGA-TM-A7CA    TCGA-TM-A7CF 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84B    TCGA-TM-A84C    TCGA-TM-A84F    TCGA-TM-A84G    TCGA-TM-A84H 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84I    TCGA-TM-A84J    TCGA-TM-A84L    TCGA-TM-A84M    TCGA-TM-A84O 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84Q    TCGA-TM-A84R    TCGA-TM-A84S    TCGA-TM-A84T    TCGA-TQ-A7RF 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RG    TCGA-TQ-A7RH    TCGA-TQ-A7RI    TCGA-TQ-A7RJ    TCGA-TQ-A7RK 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RM    TCGA-TQ-A7RN    TCGA-TQ-A7RO    TCGA-TQ-A7RP    TCGA-TQ-A7RQ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RR    TCGA-TQ-A7RS    TCGA-TQ-A7RU    TCGA-TQ-A7RW    TCGA-TQ-A8XE 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VM-A8C8    TCGA-VM-A8C9    TCGA-VM-A8CA    TCGA-VM-A8CB    TCGA-VM-A8CD 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VM-A8CE    TCGA-VM-A8CF    TCGA-VM-A8CH    TCGA-VV-A829    TCGA-VV-A86M 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VW-A7QS    TCGA-VW-A8FI    TCGA-W9-A837    TCGA-WH-A86K    TCGA-WY-A858 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-WY-A859    TCGA-WY-A85A    TCGA-WY-A85B    TCGA-WY-A85C    TCGA-WY-A85D 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-WY-A85E 
"CDA WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CDA MUTATED        0      1      0
  CDA WILD-TYPE    223    185    103
D147V12, multiclass
[1] "Remove cluster labels:" "CDA MUTATED"           
clus
  CDA MUTATED CDA WILD-TYPE 
            1           511 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5280    TCGA-DB-5281 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A4X9    TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A4XE    TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A64O    TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A64U    TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A75L    TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-5142    TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-A66D    TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-A7UT    TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-5851    TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-5870    TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6393    TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6399    TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6404    TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6410    TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7009    TCGA-DU-7010    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7014 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7015    TCGA-DU-7018    TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7292 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7294    TCGA-DU-7298    TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7302    TCGA-DU-7304    TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-8161    TCGA-DU-8162    TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-8166    TCGA-DU-8167    TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A5TS    TCGA-DU-A5TT    TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A6S2    TCGA-DU-A6S3    TCGA-DU-A6S6    TCGA-DU-A6S7    TCGA-DU-A6S8 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A76K    TCGA-DU-A76L    TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A7T8    TCGA-DU-A7TA    TCGA-DU-A7TB    TCGA-DU-A7TC    TCGA-DU-A7TD 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A7TG    TCGA-DU-A7TI    TCGA-DU-A7TJ    TCGA-E1-5302    TCGA-E1-5303 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-5304    TCGA-E1-5305    TCGA-E1-5307    TCGA-E1-5311    TCGA-E1-5318 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-5319    TCGA-E1-5322    TCGA-E1-A7YD    TCGA-E1-A7YE    TCGA-E1-A7YH 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YI    TCGA-E1-A7YJ    TCGA-E1-A7YK    TCGA-E1-A7YL    TCGA-E1-A7YM 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YN    TCGA-E1-A7YO    TCGA-E1-A7YQ    TCGA-E1-A7YS    TCGA-E1-A7YU 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YV    TCGA-E1-A7YW    TCGA-E1-A7YY    TCGA-E1-A7Z2    TCGA-E1-A7Z3 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7Z4    TCGA-E1-A7Z6    TCGA-EZ-7264    TCGA-F6-A8O3    TCGA-F6-A8O4 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-5962    TCGA-FG-5963    TCGA-FG-5964    TCGA-FG-5965    TCGA-FG-6688 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-6689    TCGA-FG-6690    TCGA-FG-6691    TCGA-FG-6692    TCGA-FG-7634 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-7636    TCGA-FG-7637    TCGA-FG-7638    TCGA-FG-7641    TCGA-FG-7643 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-8181    TCGA-FG-8182    TCGA-FG-8185    TCGA-FG-8186    TCGA-FG-8187 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-8188    TCGA-FG-8189    TCGA-FG-8191    TCGA-FG-A4MT    TCGA-FG-A4MU 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A4MW    TCGA-FG-A4MX    TCGA-FG-A4MY    TCGA-FG-A60J    TCGA-FG-A60K 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A60L    TCGA-FG-A6IZ    TCGA-FG-A6J1    TCGA-FG-A6J3    TCGA-FG-A70Y 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A70Z    TCGA-FG-A710    TCGA-FG-A711    TCGA-FG-A713    TCGA-FG-A87N 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A87Q    TCGA-FN-7833    TCGA-HT-7467    TCGA-HT-7468    TCGA-HT-7469 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7470    TCGA-HT-7471    TCGA-HT-7472    TCGA-HT-7473    TCGA-HT-7474 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7475    TCGA-HT-7476    TCGA-HT-7477    TCGA-HT-7478    TCGA-HT-7479 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7480    TCGA-HT-7481    TCGA-HT-7482    TCGA-HT-7483    TCGA-HT-7485 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7601    TCGA-HT-7602    TCGA-HT-7603    TCGA-HT-7604    TCGA-HT-7605 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7606    TCGA-HT-7607    TCGA-HT-7608    TCGA-HT-7609    TCGA-HT-7610 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7611    TCGA-HT-7616    TCGA-HT-7620    TCGA-HT-7676    TCGA-HT-7677 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7680    TCGA-HT-7681    TCGA-HT-7684    TCGA-HT-7686    TCGA-HT-7687 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7688    TCGA-HT-7689    TCGA-HT-7690    TCGA-HT-7691    TCGA-HT-7692 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7693    TCGA-HT-7694    TCGA-HT-7695    TCGA-HT-7854    TCGA-HT-7855 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7856    TCGA-HT-7857    TCGA-HT-7858    TCGA-HT-7860    TCGA-HT-7873 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7874    TCGA-HT-7875    TCGA-HT-7877    TCGA-HT-7879    TCGA-HT-7880 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7881    TCGA-HT-7882    TCGA-HT-7884    TCGA-HT-7902    TCGA-HT-8010 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8011    TCGA-HT-8012    TCGA-HT-8013    TCGA-HT-8015    TCGA-HT-8018 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8019    TCGA-HT-8104    TCGA-HT-8105    TCGA-HT-8106    TCGA-HT-8107 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8108    TCGA-HT-8109    TCGA-HT-8110    TCGA-HT-8111    TCGA-HT-8113 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8114    TCGA-HT-8558    TCGA-HT-8563    TCGA-HT-8564    TCGA-HT-A4DS 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A4DV    TCGA-HT-A5R5    TCGA-HT-A5R7    TCGA-HT-A5R9    TCGA-HT-A5RA 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A5RB    TCGA-HT-A5RC    TCGA-HT-A614    TCGA-HT-A615    TCGA-HT-A616 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A617    TCGA-HT-A618    TCGA-HT-A619    TCGA-HT-A61A    TCGA-HT-A61B 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A61C    TCGA-HT-A74H    TCGA-HT-A74K    TCGA-HT-A74L    TCGA-HT-A74O 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-7486    TCGA-HW-7487    TCGA-HW-7489    TCGA-HW-7490    TCGA-HW-7491 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-7493    TCGA-HW-7495    TCGA-HW-8319    TCGA-HW-8320    TCGA-HW-8321 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-8322    TCGA-HW-A5KJ    TCGA-HW-A5KK    TCGA-HW-A5KL    TCGA-HW-A5KM 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-IK-7675    TCGA-IK-8125    TCGA-KT-A74X    TCGA-KT-A7W1    TCGA-P5-A5ET 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A5EU    TCGA-P5-A5EV    TCGA-P5-A5EW    TCGA-P5-A5EX    TCGA-P5-A5EY 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A5EZ    TCGA-P5-A5F0    TCGA-P5-A5F1    TCGA-P5-A5F2    TCGA-P5-A5F4 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A5F6    TCGA-P5-A72U    TCGA-P5-A72W    TCGA-P5-A72X    TCGA-P5-A72Z 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A730    TCGA-P5-A731    TCGA-P5-A733    TCGA-P5-A735    TCGA-P5-A736 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A737    TCGA-P5-A77W    TCGA-P5-A77X    TCGA-P5-A780    TCGA-P5-A781 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A65R    TCGA-QH-A65S    TCGA-QH-A65V    TCGA-QH-A65X    TCGA-QH-A65Z 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6CS    TCGA-QH-A6CU    TCGA-QH-A6CV    TCGA-QH-A6CX    TCGA-QH-A6CY 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6CZ    TCGA-QH-A6X3    TCGA-QH-A6X4    TCGA-QH-A6X5    TCGA-QH-A6X8 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6X9    TCGA-QH-A6XA    TCGA-QH-A6XC    TCGA-QH-A86X    TCGA-QH-A870 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-R8-A6MK    TCGA-R8-A6ML    TCGA-R8-A6MO    TCGA-R8-A6YH    TCGA-R8-A73M 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-RY-A83X    TCGA-RY-A83Y    TCGA-RY-A83Z    TCGA-RY-A840    TCGA-RY-A843 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-RY-A845    TCGA-RY-A847    TCGA-S9-A6TS    TCGA-S9-A6TU    TCGA-S9-A6TV 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6TW    TCGA-S9-A6TX    TCGA-S9-A6TY    TCGA-S9-A6TZ    TCGA-S9-A6U0 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6U1    TCGA-S9-A6U2    TCGA-S9-A6U5    TCGA-S9-A6U6    TCGA-S9-A6U8 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6U9    TCGA-S9-A6UA    TCGA-S9-A6UB    TCGA-S9-A6WD    TCGA-S9-A6WE 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6WG    TCGA-S9-A6WH    TCGA-S9-A6WI    TCGA-S9-A6WL    TCGA-S9-A6WM 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6WN    TCGA-S9-A6WO    TCGA-S9-A6WP    TCGA-S9-A6WQ    TCGA-S9-A7IQ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7IS    TCGA-S9-A7IX    TCGA-S9-A7IY    TCGA-S9-A7IZ    TCGA-S9-A7J0 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7J1    TCGA-S9-A7J2    TCGA-S9-A7J3    TCGA-S9-A7QW    TCGA-S9-A7QX 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7QY    TCGA-S9-A7QZ    TCGA-S9-A7R1    TCGA-S9-A7R2    TCGA-S9-A7R3 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7R4    TCGA-S9-A7R7    TCGA-S9-A7R8    TCGA-S9-A89V    TCGA-S9-A89Z 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A7C3    TCGA-TM-A7C4    TCGA-TM-A7C5    TCGA-TM-A7CA    TCGA-TM-A7CF 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84B    TCGA-TM-A84C    TCGA-TM-A84F    TCGA-TM-A84G    TCGA-TM-A84H 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84I    TCGA-TM-A84J    TCGA-TM-A84L    TCGA-TM-A84M    TCGA-TM-A84O 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84Q    TCGA-TM-A84R    TCGA-TM-A84S    TCGA-TM-A84T    TCGA-TQ-A7RF 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RG    TCGA-TQ-A7RH    TCGA-TQ-A7RI    TCGA-TQ-A7RJ    TCGA-TQ-A7RK 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RM    TCGA-TQ-A7RN    TCGA-TQ-A7RO    TCGA-TQ-A7RP    TCGA-TQ-A7RQ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RR    TCGA-TQ-A7RS    TCGA-TQ-A7RU    TCGA-TQ-A7RW    TCGA-TQ-A8XE 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VM-A8C8    TCGA-VM-A8C9    TCGA-VM-A8CA    TCGA-VM-A8CB    TCGA-VM-A8CD 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VM-A8CE    TCGA-VM-A8CF    TCGA-VM-A8CH    TCGA-VV-A829    TCGA-VV-A86M 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VW-A7QS    TCGA-VW-A8FI    TCGA-W9-A837    TCGA-WH-A86K    TCGA-WY-A858 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-WY-A859    TCGA-WY-A85A    TCGA-WY-A85B    TCGA-WY-A85C    TCGA-WY-A85D 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-WY-A85E 
"CDA WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDA MUTATED        0      0      1      0
  CDA WILD-TYPE    127    119    105    156
D147V13, multiclass
[1] "Remove cluster labels:" "CDA MUTATED"           
clus
  CDA MUTATED CDA WILD-TYPE 
            1           507 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5281    TCGA-DB-A4X9 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD    TCGA-DB-A4XE 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L    TCGA-DB-A64O 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S    TCGA-DB-A64U 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K    TCGA-DB-A75L 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141    TCGA-DH-5142 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B    TCGA-DH-A66D 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US    TCGA-DH-A7UT 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849    TCGA-DU-5851 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855    TCGA-DU-5870 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392    TCGA-DU-6393 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397    TCGA-DU-6399 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403    TCGA-DU-6404 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408    TCGA-DU-6410 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008    TCGA-DU-7009 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7010    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7014    TCGA-DU-7015 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7018    TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7292    TCGA-DU-7294 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7298    TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7304    TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-8162    TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8166 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-8167    TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A5TT    TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A6S3    TCGA-DU-A6S6    TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A76L    TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A7TA    TCGA-DU-A7TB    TCGA-DU-A7TC    TCGA-DU-A7TD    TCGA-DU-A7TG 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A7TI    TCGA-DU-A7TJ    TCGA-E1-5302    TCGA-E1-5303    TCGA-E1-5304 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-5305    TCGA-E1-5307    TCGA-E1-5311    TCGA-E1-5318    TCGA-E1-5319 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-5322    TCGA-E1-A7YD    TCGA-E1-A7YE    TCGA-E1-A7YH    TCGA-E1-A7YI 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YJ    TCGA-E1-A7YK    TCGA-E1-A7YL    TCGA-E1-A7YM    TCGA-E1-A7YN 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YO    TCGA-E1-A7YQ    TCGA-E1-A7YS    TCGA-E1-A7YU    TCGA-E1-A7YV 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YW    TCGA-E1-A7YY    TCGA-E1-A7Z2    TCGA-E1-A7Z3    TCGA-E1-A7Z4 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7Z6    TCGA-EZ-7264    TCGA-F6-A8O3    TCGA-F6-A8O4    TCGA-FG-5962 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-5963    TCGA-FG-5964    TCGA-FG-5965    TCGA-FG-6688    TCGA-FG-6689 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-6690    TCGA-FG-6691    TCGA-FG-6692    TCGA-FG-7634    TCGA-FG-7636 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-7637    TCGA-FG-7638    TCGA-FG-7641    TCGA-FG-7643    TCGA-FG-8181 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-8182    TCGA-FG-8185    TCGA-FG-8186    TCGA-FG-8187    TCGA-FG-8188 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-8189    TCGA-FG-8191    TCGA-FG-A4MT    TCGA-FG-A4MU    TCGA-FG-A4MW 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A4MX    TCGA-FG-A4MY    TCGA-FG-A60J    TCGA-FG-A60K    TCGA-FG-A60L 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A6IZ    TCGA-FG-A6J1    TCGA-FG-A6J3    TCGA-FG-A70Y    TCGA-FG-A70Z 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A710    TCGA-FG-A711    TCGA-FG-A713    TCGA-FG-A87N    TCGA-FG-A87Q 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FN-7833    TCGA-HT-7467    TCGA-HT-7468    TCGA-HT-7469    TCGA-HT-7470 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7471    TCGA-HT-7472    TCGA-HT-7473    TCGA-HT-7474    TCGA-HT-7475 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7476    TCGA-HT-7477    TCGA-HT-7478    TCGA-HT-7479    TCGA-HT-7480 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7481    TCGA-HT-7482    TCGA-HT-7483    TCGA-HT-7485    TCGA-HT-7601 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7602    TCGA-HT-7603    TCGA-HT-7604    TCGA-HT-7605    TCGA-HT-7606 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7607    TCGA-HT-7608    TCGA-HT-7609    TCGA-HT-7610    TCGA-HT-7611 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7616    TCGA-HT-7620    TCGA-HT-7676    TCGA-HT-7677    TCGA-HT-7680 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7681    TCGA-HT-7684    TCGA-HT-7686    TCGA-HT-7687    TCGA-HT-7688 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7689    TCGA-HT-7690    TCGA-HT-7691    TCGA-HT-7692    TCGA-HT-7693 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7694    TCGA-HT-7695    TCGA-HT-7854    TCGA-HT-7855    TCGA-HT-7856 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7857    TCGA-HT-7858    TCGA-HT-7860    TCGA-HT-7873    TCGA-HT-7874 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7875    TCGA-HT-7877    TCGA-HT-7879    TCGA-HT-7880    TCGA-HT-7881 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7882    TCGA-HT-7884    TCGA-HT-7902    TCGA-HT-8010    TCGA-HT-8011 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8012    TCGA-HT-8013    TCGA-HT-8015    TCGA-HT-8018    TCGA-HT-8019 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8104    TCGA-HT-8105    TCGA-HT-8106    TCGA-HT-8107    TCGA-HT-8108 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8109    TCGA-HT-8110    TCGA-HT-8111    TCGA-HT-8113    TCGA-HT-8114 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8558    TCGA-HT-8563    TCGA-HT-8564    TCGA-HT-A4DS    TCGA-HT-A4DV 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A5R5    TCGA-HT-A5R7    TCGA-HT-A5R9    TCGA-HT-A5RA    TCGA-HT-A5RB 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A5RC    TCGA-HT-A614    TCGA-HT-A615    TCGA-HT-A616    TCGA-HT-A617 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A618    TCGA-HT-A619    TCGA-HT-A61A    TCGA-HT-A61B    TCGA-HT-A61C 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A74H    TCGA-HT-A74K    TCGA-HT-A74L    TCGA-HT-A74O    TCGA-HW-7486 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-7487    TCGA-HW-7489    TCGA-HW-7490    TCGA-HW-7491    TCGA-HW-7493 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-7495    TCGA-HW-8319    TCGA-HW-8320    TCGA-HW-8321    TCGA-HW-8322 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-A5KJ    TCGA-HW-A5KK    TCGA-HW-A5KL    TCGA-HW-A5KM    TCGA-IK-7675 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-IK-8125    TCGA-KT-A74X    TCGA-KT-A7W1    TCGA-P5-A5ET    TCGA-P5-A5EU 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A5EV    TCGA-P5-A5EW    TCGA-P5-A5EX    TCGA-P5-A5EY    TCGA-P5-A5EZ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A5F0    TCGA-P5-A5F1    TCGA-P5-A5F2    TCGA-P5-A5F4    TCGA-P5-A72U 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A72W    TCGA-P5-A72X    TCGA-P5-A72Z    TCGA-P5-A730    TCGA-P5-A731 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A733    TCGA-P5-A735    TCGA-P5-A737    TCGA-P5-A77W    TCGA-P5-A77X 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A780    TCGA-P5-A781    TCGA-QH-A65R    TCGA-QH-A65S    TCGA-QH-A65V 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A65X    TCGA-QH-A65Z    TCGA-QH-A6CS    TCGA-QH-A6CU    TCGA-QH-A6CV 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6CX    TCGA-QH-A6CY    TCGA-QH-A6CZ    TCGA-QH-A6X3    TCGA-QH-A6X4 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6X5    TCGA-QH-A6X8    TCGA-QH-A6X9    TCGA-QH-A6XA    TCGA-QH-A6XC 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A86X    TCGA-QH-A870    TCGA-R8-A6MK    TCGA-R8-A6ML    TCGA-R8-A6MO 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-R8-A6YH    TCGA-R8-A73M    TCGA-RY-A83X    TCGA-RY-A83Y    TCGA-RY-A83Z 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-RY-A840    TCGA-RY-A843    TCGA-RY-A845    TCGA-RY-A847    TCGA-S9-A6TS 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6TU    TCGA-S9-A6TV    TCGA-S9-A6TW    TCGA-S9-A6TX    TCGA-S9-A6TY 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6TZ    TCGA-S9-A6U0    TCGA-S9-A6U1    TCGA-S9-A6U2    TCGA-S9-A6U5 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6U6    TCGA-S9-A6U8    TCGA-S9-A6UA    TCGA-S9-A6UB    TCGA-S9-A6WD 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6WE    TCGA-S9-A6WG    TCGA-S9-A6WH    TCGA-S9-A6WI    TCGA-S9-A6WL 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6WM    TCGA-S9-A6WN    TCGA-S9-A6WO    TCGA-S9-A6WP    TCGA-S9-A6WQ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7IQ    TCGA-S9-A7IS    TCGA-S9-A7IX    TCGA-S9-A7IY    TCGA-S9-A7IZ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7J0    TCGA-S9-A7J1    TCGA-S9-A7J2    TCGA-S9-A7J3    TCGA-S9-A7QW 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7QX    TCGA-S9-A7QY    TCGA-S9-A7QZ    TCGA-S9-A7R1    TCGA-S9-A7R2 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7R3    TCGA-S9-A7R4    TCGA-S9-A7R7    TCGA-S9-A7R8    TCGA-S9-A89V 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A89Z    TCGA-TM-A7C3    TCGA-TM-A7C4    TCGA-TM-A7C5    TCGA-TM-A7CA 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A7CF    TCGA-TM-A84B    TCGA-TM-A84C    TCGA-TM-A84F    TCGA-TM-A84G 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84H    TCGA-TM-A84I    TCGA-TM-A84J    TCGA-TM-A84L    TCGA-TM-A84M 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84O    TCGA-TM-A84Q    TCGA-TM-A84R    TCGA-TM-A84S    TCGA-TM-A84T 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RF    TCGA-TQ-A7RG    TCGA-TQ-A7RH    TCGA-TQ-A7RI    TCGA-TQ-A7RJ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RK    TCGA-TQ-A7RM    TCGA-TQ-A7RN    TCGA-TQ-A7RO    TCGA-TQ-A7RP 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RQ    TCGA-TQ-A7RR    TCGA-TQ-A7RS    TCGA-TQ-A7RU    TCGA-TQ-A7RW 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A8XE    TCGA-VM-A8C8    TCGA-VM-A8C9    TCGA-VM-A8CA    TCGA-VM-A8CB 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VM-A8CD    TCGA-VM-A8CE    TCGA-VM-A8CF    TCGA-VM-A8CH    TCGA-VV-A829 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VV-A86M    TCGA-VW-A7QS    TCGA-VW-A8FI    TCGA-W9-A837    TCGA-WH-A86K 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-WY-A858    TCGA-WY-A859    TCGA-WY-A85A    TCGA-WY-A85B    TCGA-WY-A85C 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-WY-A85D    TCGA-WY-A85E 
"CDA WILD-TYPE" "CDA WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  CDA MUTATED        0      0      0      0      0      1
  CDA WILD-TYPE     99     77    120     57     63     91
D147V14, multiclass
[1] "Remove cluster labels:" "CDA MUTATED"           
clus
  CDA MUTATED CDA WILD-TYPE 
            1           507 
   TCGA-CS-4938    TCGA-CS-4941    TCGA-CS-4942    TCGA-CS-4943    TCGA-CS-4944 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-5390    TCGA-CS-5393    TCGA-CS-5394    TCGA-CS-5395    TCGA-CS-5396 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-5397    TCGA-CS-6186    TCGA-CS-6188    TCGA-CS-6290    TCGA-CS-6665 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-CS-6666    TCGA-CS-6667    TCGA-CS-6668    TCGA-CS-6669    TCGA-CS-6670 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-5270    TCGA-DB-5273    TCGA-DB-5274    TCGA-DB-5275    TCGA-DB-5276 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-5277    TCGA-DB-5278    TCGA-DB-5279    TCGA-DB-5281    TCGA-DB-A4X9 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A4XA    TCGA-DB-A4XB    TCGA-DB-A4XC    TCGA-DB-A4XD    TCGA-DB-A4XE 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A4XF    TCGA-DB-A4XG    TCGA-DB-A4XH    TCGA-DB-A64L    TCGA-DB-A64O 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A64P    TCGA-DB-A64Q    TCGA-DB-A64R    TCGA-DB-A64S    TCGA-DB-A64U 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A64V    TCGA-DB-A64W    TCGA-DB-A64X    TCGA-DB-A75K    TCGA-DB-A75L 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DB-A75O    TCGA-DB-A75P    TCGA-DH-5140    TCGA-DH-5141    TCGA-DH-5142 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-5143    TCGA-DH-5144    TCGA-DH-A669    TCGA-DH-A66B    TCGA-DH-A66D 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-A66F    TCGA-DH-A66G    TCGA-DH-A7UR    TCGA-DH-A7US    TCGA-DH-A7UT 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DH-A7UU    TCGA-DH-A7UV    TCGA-DU-5847    TCGA-DU-5849    TCGA-DU-5851 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-5852    TCGA-DU-5853    TCGA-DU-5854    TCGA-DU-5855    TCGA-DU-5870 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-5871    TCGA-DU-5872    TCGA-DU-5874    TCGA-DU-6392    TCGA-DU-6393 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6394    TCGA-DU-6395    TCGA-DU-6396    TCGA-DU-6397    TCGA-DU-6399 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6400    TCGA-DU-6401    TCGA-DU-6402    TCGA-DU-6403    TCGA-DU-6404 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6405    TCGA-DU-6406    TCGA-DU-6407    TCGA-DU-6408    TCGA-DU-6410 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-6542    TCGA-DU-7006    TCGA-DU-7007    TCGA-DU-7008    TCGA-DU-7009 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7010    TCGA-DU-7012    TCGA-DU-7013    TCGA-DU-7014    TCGA-DU-7015 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7018    TCGA-DU-7019    TCGA-DU-7290    TCGA-DU-7292    TCGA-DU-7294 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7298    TCGA-DU-7299    TCGA-DU-7300    TCGA-DU-7301    TCGA-DU-7302 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-7304    TCGA-DU-7306    TCGA-DU-7309    TCGA-DU-8158    TCGA-DU-8161 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-8162    TCGA-DU-8163    TCGA-DU-8164    TCGA-DU-8165    TCGA-DU-8166 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-8167    TCGA-DU-8168    TCGA-DU-A5TP    TCGA-DU-A5TR    TCGA-DU-A5TS 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A5TT    TCGA-DU-A5TU    TCGA-DU-A5TW    TCGA-DU-A5TY    TCGA-DU-A6S2 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A6S3    TCGA-DU-A6S6    TCGA-DU-A6S7    TCGA-DU-A6S8    TCGA-DU-A76K 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A76L    TCGA-DU-A76O    TCGA-DU-A76R    TCGA-DU-A7T6    TCGA-DU-A7T8 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A7TA    TCGA-DU-A7TB    TCGA-DU-A7TC    TCGA-DU-A7TD    TCGA-DU-A7TG 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-DU-A7TI    TCGA-DU-A7TJ    TCGA-E1-5302    TCGA-E1-5303    TCGA-E1-5304 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-5305    TCGA-E1-5307    TCGA-E1-5311    TCGA-E1-5318    TCGA-E1-5319 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-5322    TCGA-E1-A7YD    TCGA-E1-A7YE    TCGA-E1-A7YH    TCGA-E1-A7YI 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YJ    TCGA-E1-A7YK    TCGA-E1-A7YL    TCGA-E1-A7YM    TCGA-E1-A7YN 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YO    TCGA-E1-A7YQ    TCGA-E1-A7YS    TCGA-E1-A7YU    TCGA-E1-A7YV 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7YW    TCGA-E1-A7YY    TCGA-E1-A7Z2    TCGA-E1-A7Z3    TCGA-E1-A7Z4 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-E1-A7Z6    TCGA-EZ-7264    TCGA-F6-A8O3    TCGA-F6-A8O4    TCGA-FG-5962 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-5963    TCGA-FG-5964    TCGA-FG-5965    TCGA-FG-6688    TCGA-FG-6689 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-6690    TCGA-FG-6691    TCGA-FG-6692    TCGA-FG-7634    TCGA-FG-7636 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-7637    TCGA-FG-7638    TCGA-FG-7641    TCGA-FG-7643    TCGA-FG-8181 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-8182    TCGA-FG-8185    TCGA-FG-8186    TCGA-FG-8187    TCGA-FG-8188 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-8189    TCGA-FG-8191    TCGA-FG-A4MT    TCGA-FG-A4MU    TCGA-FG-A4MW 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A4MX    TCGA-FG-A4MY    TCGA-FG-A60J    TCGA-FG-A60K    TCGA-FG-A60L 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A6IZ    TCGA-FG-A6J1    TCGA-FG-A6J3    TCGA-FG-A70Y    TCGA-FG-A70Z 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FG-A710    TCGA-FG-A711    TCGA-FG-A713    TCGA-FG-A87N    TCGA-FG-A87Q 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-FN-7833    TCGA-HT-7467    TCGA-HT-7468    TCGA-HT-7469    TCGA-HT-7470 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7471    TCGA-HT-7472    TCGA-HT-7473    TCGA-HT-7474    TCGA-HT-7475 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7476    TCGA-HT-7477    TCGA-HT-7478    TCGA-HT-7479    TCGA-HT-7480 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7481    TCGA-HT-7482    TCGA-HT-7483    TCGA-HT-7485    TCGA-HT-7601 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7602    TCGA-HT-7603    TCGA-HT-7604    TCGA-HT-7605    TCGA-HT-7606 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7607    TCGA-HT-7608    TCGA-HT-7609    TCGA-HT-7610    TCGA-HT-7611 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7616    TCGA-HT-7620    TCGA-HT-7676    TCGA-HT-7677    TCGA-HT-7680 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7681    TCGA-HT-7684    TCGA-HT-7686    TCGA-HT-7687    TCGA-HT-7688 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7689    TCGA-HT-7690    TCGA-HT-7691    TCGA-HT-7692    TCGA-HT-7693 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7694    TCGA-HT-7695    TCGA-HT-7854    TCGA-HT-7855    TCGA-HT-7856 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7857    TCGA-HT-7858    TCGA-HT-7860    TCGA-HT-7873    TCGA-HT-7874 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7875    TCGA-HT-7877    TCGA-HT-7879    TCGA-HT-7880    TCGA-HT-7881 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-7882    TCGA-HT-7884    TCGA-HT-7902    TCGA-HT-8010    TCGA-HT-8011 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8012    TCGA-HT-8013    TCGA-HT-8015    TCGA-HT-8018    TCGA-HT-8019 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8104    TCGA-HT-8105    TCGA-HT-8106    TCGA-HT-8107    TCGA-HT-8108 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8109    TCGA-HT-8110    TCGA-HT-8111    TCGA-HT-8113    TCGA-HT-8114 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-8558    TCGA-HT-8563    TCGA-HT-8564    TCGA-HT-A4DS    TCGA-HT-A4DV 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A5R5    TCGA-HT-A5R7    TCGA-HT-A5R9    TCGA-HT-A5RA    TCGA-HT-A5RB 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A5RC    TCGA-HT-A614    TCGA-HT-A615    TCGA-HT-A616    TCGA-HT-A617 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A618    TCGA-HT-A619    TCGA-HT-A61A    TCGA-HT-A61B    TCGA-HT-A61C 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HT-A74H    TCGA-HT-A74K    TCGA-HT-A74L    TCGA-HT-A74O    TCGA-HW-7486 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-7487    TCGA-HW-7489    TCGA-HW-7490    TCGA-HW-7491    TCGA-HW-7493 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-7495    TCGA-HW-8319    TCGA-HW-8320    TCGA-HW-8321    TCGA-HW-8322 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-HW-A5KJ    TCGA-HW-A5KK    TCGA-HW-A5KL    TCGA-HW-A5KM    TCGA-IK-7675 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-IK-8125    TCGA-KT-A74X    TCGA-KT-A7W1    TCGA-P5-A5ET    TCGA-P5-A5EU 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A5EV    TCGA-P5-A5EW    TCGA-P5-A5EX    TCGA-P5-A5EY    TCGA-P5-A5EZ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A5F0    TCGA-P5-A5F1    TCGA-P5-A5F2    TCGA-P5-A5F4    TCGA-P5-A72U 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A72W    TCGA-P5-A72X    TCGA-P5-A72Z    TCGA-P5-A730    TCGA-P5-A731 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A733    TCGA-P5-A735    TCGA-P5-A737    TCGA-P5-A77W    TCGA-P5-A77X 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-P5-A780    TCGA-P5-A781    TCGA-QH-A65R    TCGA-QH-A65S    TCGA-QH-A65V 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A65X    TCGA-QH-A65Z    TCGA-QH-A6CS    TCGA-QH-A6CU    TCGA-QH-A6CV 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6CX    TCGA-QH-A6CY    TCGA-QH-A6CZ    TCGA-QH-A6X3    TCGA-QH-A6X4 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A6X5    TCGA-QH-A6X8    TCGA-QH-A6X9    TCGA-QH-A6XA    TCGA-QH-A6XC 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-QH-A86X    TCGA-QH-A870    TCGA-R8-A6MK    TCGA-R8-A6ML    TCGA-R8-A6MO 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-R8-A6YH    TCGA-R8-A73M    TCGA-RY-A83X    TCGA-RY-A83Y    TCGA-RY-A83Z 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-RY-A840    TCGA-RY-A843    TCGA-RY-A845    TCGA-RY-A847    TCGA-S9-A6TS 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6TU    TCGA-S9-A6TV    TCGA-S9-A6TW    TCGA-S9-A6TX    TCGA-S9-A6TY 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6TZ    TCGA-S9-A6U0    TCGA-S9-A6U1    TCGA-S9-A6U2    TCGA-S9-A6U5 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6U6    TCGA-S9-A6U8    TCGA-S9-A6UA    TCGA-S9-A6UB    TCGA-S9-A6WD 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6WE    TCGA-S9-A6WG    TCGA-S9-A6WH    TCGA-S9-A6WI    TCGA-S9-A6WL 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A6WM    TCGA-S9-A6WN    TCGA-S9-A6WO    TCGA-S9-A6WP    TCGA-S9-A6WQ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7IQ    TCGA-S9-A7IS    TCGA-S9-A7IX    TCGA-S9-A7IY    TCGA-S9-A7IZ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7J0    TCGA-S9-A7J1    TCGA-S9-A7J2    TCGA-S9-A7J3    TCGA-S9-A7QW 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7QX    TCGA-S9-A7QY    TCGA-S9-A7QZ    TCGA-S9-A7R1    TCGA-S9-A7R2 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A7R3    TCGA-S9-A7R4    TCGA-S9-A7R7    TCGA-S9-A7R8    TCGA-S9-A89V 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-S9-A89Z    TCGA-TM-A7C3    TCGA-TM-A7C4    TCGA-TM-A7C5    TCGA-TM-A7CA 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A7CF    TCGA-TM-A84B    TCGA-TM-A84C    TCGA-TM-A84F    TCGA-TM-A84G 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84H    TCGA-TM-A84I    TCGA-TM-A84J    TCGA-TM-A84L    TCGA-TM-A84M 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TM-A84O    TCGA-TM-A84Q    TCGA-TM-A84R    TCGA-TM-A84S    TCGA-TM-A84T 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RF    TCGA-TQ-A7RG    TCGA-TQ-A7RH    TCGA-TQ-A7RI    TCGA-TQ-A7RJ 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RK    TCGA-TQ-A7RM    TCGA-TQ-A7RN    TCGA-TQ-A7RO    TCGA-TQ-A7RP 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A7RQ    TCGA-TQ-A7RR    TCGA-TQ-A7RS    TCGA-TQ-A7RU    TCGA-TQ-A7RW 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-TQ-A8XE    TCGA-VM-A8C8    TCGA-VM-A8C9    TCGA-VM-A8CA    TCGA-VM-A8CB 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VM-A8CD    TCGA-VM-A8CE    TCGA-VM-A8CF    TCGA-VM-A8CH    TCGA-VV-A829 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-VV-A86M    TCGA-VW-A7QS    TCGA-VW-A8FI    TCGA-W9-A837    TCGA-WH-A86K 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-WY-A858    TCGA-WY-A859    TCGA-WY-A85A    TCGA-WY-A85B    TCGA-WY-A85C 
"CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" "CDA WILD-TYPE" 
   TCGA-WY-A85D    TCGA-WY-A85E 
"CDA WILD-TYPE" "CDA WILD-TYPE" 

Clustering(148) Variable = TTC30B MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TTC30B MUTATED        0      0      0      1
  TTC30B WILD-TYPE     78     41     64     56
D148V1, multiclass
[1] "Remove cluster labels:" "TTC30B MUTATED"        
clus
  TTC30B MUTATED TTC30B WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TTC30B MUTATED        0      1      0      0
  TTC30B WILD-TYPE     63     49     48     79
D148V2, multiclass
[1] "Remove cluster labels:" "TTC30B MUTATED"        
clus
  TTC30B MUTATED TTC30B WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TTC30B MUTATED        0      0      1      0
  TTC30B WILD-TYPE     70     98     43     63
D148V3, multiclass
[1] "Remove cluster labels:" "TTC30B MUTATED"        
clus
  TTC30B MUTATED TTC30B WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2559       TCGA-06-2561 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TTC30B MUTATED        1      0      0
  TTC30B WILD-TYPE    137     61     76
D148V4, multiclass
[1] "Remove cluster labels:" "TTC30B MUTATED"        
clus
  TTC30B MUTATED TTC30B WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2559       TCGA-06-2561 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"TTC30B WILD-TYPE" "TTC30B WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TTC30B MUTATED        2      5      0
  TTC30B WILD-TYPE    290    427     62
D148V5, multiclass
        clus
vv       TTC30B MUTATED TTC30B WILD-TYPE
  CLUS_1              2              290
  CLUS_2              5              427
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TTC30B MUTATED        1      4      0      1
  TTC30B WILD-TYPE    152    219     88    160
D148V6, multiclass
        clus
vv       TTC30B MUTATED TTC30B WILD-TYPE
  CLUS_1              1              152
  CLUS_2              4              219
  CLUS_3              0               88
  CLUS_4              1              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TTC30B MUTATED        1      1      0      1
  TTC30B WILD-TYPE    184    154    138     94
D148V7, multiclass
        clus
vv       TTC30B MUTATED TTC30B WILD-TYPE
  CLUS_1              1              184
  CLUS_2              1              154
  CLUS_3              0              138
  CLUS_4              1               94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TTC30B MUTATED        1      0      2
  TTC30B WILD-TYPE    204    220    146
D148V8, multiclass
        clus
vv       TTC30B MUTATED TTC30B WILD-TYPE
  CLUS_1              1              204
  CLUS_2              0              220
  CLUS_3              2              146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TTC30B MUTATED        2      1      4
  TTC30B WILD-TYPE    236    190    224
D148V9, multiclass
        clus
vv       TTC30B MUTATED TTC30B WILD-TYPE
  CLUS_1              2              236
  CLUS_2              1              190
  CLUS_3              4              224
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TTC30B MUTATED        1      4      2
  TTC30B WILD-TYPE    195    187    268
D148V10, multiclass
        clus
vv       TTC30B MUTATED TTC30B WILD-TYPE
  CLUS_1              1              195
  CLUS_2              4              187
  CLUS_3              2              268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TTC30B MUTATED        1      4      0      1
  TTC30B WILD-TYPE    139    103     83    181
D148V11, multiclass
        clus
vv       TTC30B MUTATED TTC30B WILD-TYPE
  CLUS_1              1              139
  CLUS_2              4              103
  CLUS_3              0               83
  CLUS_4              1              181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TTC30B MUTATED        4      1      1
  TTC30B WILD-TYPE    219    185    102
D148V12, multiclass
        clus
vv       TTC30B MUTATED TTC30B WILD-TYPE
  CLUS_1              4              219
  CLUS_2              1              185
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TTC30B MUTATED        1      1      1      3
  TTC30B WILD-TYPE    126    118    105    153
D148V13, multiclass
        clus
vv       TTC30B MUTATED TTC30B WILD-TYPE
  CLUS_1              1              126
  CLUS_2              1              118
  CLUS_3              1              105
  CLUS_4              3              153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  TTC30B MUTATED        1      0      1      1      0      3
  TTC30B WILD-TYPE     98     77    119     56     63     89
D148V14, multiclass
        clus
vv       TTC30B MUTATED TTC30B WILD-TYPE
  CLUS_1              1               98
  CLUS_2              0               77
  CLUS_3              1              119
  CLUS_4              1               56
  CLUS_5              0               63
  CLUS_6              3               89
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(149) Variable = AGXT2L1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AGXT2L1 MUTATED        0      0      0      1
  AGXT2L1 WILD-TYPE     78     41     64     56
D149V1, multiclass
[1] "Remove cluster labels:" "AGXT2L1 MUTATED"       
clus
  AGXT2L1 MUTATED AGXT2L1 WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6389 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-6390        TCGA-06-6391        TCGA-08-0386        TCGA-12-0616 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-12-0618        TCGA-12-0619        TCGA-12-0688        TCGA-12-0692 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-12-0821        TCGA-12-1597        TCGA-12-3649        TCGA-12-3650 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-12-3652        TCGA-12-3653        TCGA-12-5295        TCGA-12-5299 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-12-5301        TCGA-14-0781        TCGA-14-0786        TCGA-14-0787 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-14-0789        TCGA-14-0790        TCGA-14-0813        TCGA-14-0817 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1456        TCGA-14-1823        TCGA-14-1825 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-14-1829        TCGA-14-2554        TCGA-14-3476        TCGA-14-4157 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-15-0742        TCGA-15-1444        TCGA-16-0846        TCGA-16-0861 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-16-1045        TCGA-16-1048        TCGA-19-1390        TCGA-19-1790 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-2619        TCGA-19-2620        TCGA-19-2623        TCGA-19-2624 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-2625        TCGA-19-2629        TCGA-19-2631        TCGA-19-4068 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-5947        TCGA-19-5950        TCGA-19-5951        TCGA-19-5952 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-5954        TCGA-19-5955        TCGA-19-5958        TCGA-19-5959 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-5960        TCGA-26-1439        TCGA-26-1442        TCGA-26-5132 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-26-5133        TCGA-26-5134        TCGA-26-5135        TCGA-26-5136 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-26-5139        TCGA-27-1830        TCGA-27-1831        TCGA-27-1832 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-27-1833        TCGA-27-1834        TCGA-27-1835        TCGA-27-1836 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-27-1837        TCGA-27-1838        TCGA-27-2518        TCGA-27-2519 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-27-2521        TCGA-27-2523        TCGA-27-2524        TCGA-27-2526 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-27-2527        TCGA-27-2528        TCGA-28-1747        TCGA-28-1753 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-2501        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AGXT2L1 MUTATED        0      1      0      0
  AGXT2L1 WILD-TYPE     63     49     48     79
D149V2, multiclass
[1] "Remove cluster labels:" "AGXT2L1 MUTATED"       
clus
  AGXT2L1 MUTATED AGXT2L1 WILD-TYPE 
                1               239 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6389 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-6390        TCGA-06-6391        TCGA-08-0386        TCGA-12-0616 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-12-0618        TCGA-12-0619        TCGA-12-0688        TCGA-12-0692 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-12-0821        TCGA-12-1597        TCGA-12-3649        TCGA-12-3650 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-12-3652        TCGA-12-3653        TCGA-12-5295        TCGA-12-5299 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-12-5301        TCGA-14-0781        TCGA-14-0786        TCGA-14-0787 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-14-0789        TCGA-14-0790        TCGA-14-0813        TCGA-14-0817 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1456        TCGA-14-1823        TCGA-14-1825 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-14-1829        TCGA-14-2554        TCGA-14-3476        TCGA-14-4157 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-15-0742        TCGA-15-1444        TCGA-16-0846        TCGA-16-0861 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-16-1045        TCGA-16-1048        TCGA-19-1390        TCGA-19-1790 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-2619        TCGA-19-2620        TCGA-19-2623        TCGA-19-2624 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-2625        TCGA-19-2629        TCGA-19-2631        TCGA-19-4068 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-5947        TCGA-19-5950        TCGA-19-5951        TCGA-19-5952 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-5954        TCGA-19-5955        TCGA-19-5958        TCGA-19-5959 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-5960        TCGA-26-1439        TCGA-26-1442        TCGA-26-5132 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-26-5133        TCGA-26-5134        TCGA-26-5135        TCGA-26-5136 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-26-5139        TCGA-27-1830        TCGA-27-1831        TCGA-27-1832 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-27-1833        TCGA-27-1834        TCGA-27-1835        TCGA-27-1836 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-27-1837        TCGA-27-1838        TCGA-27-2518        TCGA-27-2519 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-27-2521        TCGA-27-2523        TCGA-27-2524        TCGA-27-2526 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-27-2527        TCGA-27-2528        TCGA-28-1747        TCGA-28-1753 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-2501        TCGA-28-2502        TCGA-28-2509        TCGA-28-2510 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-2513        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5213        TCGA-28-5214        TCGA-28-5215 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-5216        TCGA-28-5218        TCGA-28-5219        TCGA-28-5220 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-6450        TCGA-32-1970        TCGA-32-1977        TCGA-32-1979 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-32-1980        TCGA-32-1982        TCGA-32-1986        TCGA-32-1991 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-32-2491        TCGA-32-2494        TCGA-32-2495        TCGA-32-2615 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-32-2632        TCGA-32-2634        TCGA-32-2638        TCGA-32-4208 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-32-4209        TCGA-32-4210        TCGA-32-4211        TCGA-32-4213 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-32-4719        TCGA-32-5222        TCGA-41-2571        TCGA-41-2572 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-76-4925 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6282 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-6285        TCGA-81-5910        TCGA-87-5896 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AGXT2L1 MUTATED        0      1      0      0
  AGXT2L1 WILD-TYPE     70     97     44     63
D149V3, multiclass
[1] "Remove cluster labels:" "AGXT2L1 MUTATED"       
clus
  AGXT2L1 MUTATED AGXT2L1 WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-1806        TCGA-06-2557        TCGA-06-2558        TCGA-06-2559 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-2561        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2569        TCGA-06-2570 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5414        TCGA-06-5415        TCGA-06-5417 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-5418        TCGA-06-5856        TCGA-06-5858        TCGA-06-5859 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-6388        TCGA-06-6389        TCGA-06-6390        TCGA-06-6391 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-6693        TCGA-06-6694        TCGA-06-6695        TCGA-06-6697 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-6698        TCGA-06-6699        TCGA-06-6700        TCGA-06-6701 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-08-0386        TCGA-12-0616        TCGA-12-0618        TCGA-12-0619 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-12-0688        TCGA-12-0692        TCGA-12-0821        TCGA-12-1597 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-12-3649        TCGA-12-3650        TCGA-12-3652        TCGA-12-3653 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-12-5295        TCGA-12-5299        TCGA-12-5301        TCGA-14-0740 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0862 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1043        TCGA-14-1395        TCGA-14-1450 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5953 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-5954        TCGA-19-5955        TCGA-19-5958        TCGA-19-5959 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-5960        TCGA-26-1439        TCGA-26-1442        TCGA-26-5132 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-26-5133        TCGA-26-5134        TCGA-26-5135        TCGA-26-5136 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-26-5139        TCGA-26-6173        TCGA-26-6174        TCGA-27-1830 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-27-1831        TCGA-27-1832        TCGA-27-1833        TCGA-27-1834 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-27-1835        TCGA-27-1836        TCGA-27-1837        TCGA-27-1838 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-27-2518        TCGA-27-2519        TCGA-27-2521        TCGA-27-2523 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-27-2524        TCGA-27-2526        TCGA-27-2527        TCGA-27-2528 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-1747        TCGA-28-1753        TCGA-28-2502        TCGA-28-2509 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-2510        TCGA-28-2513        TCGA-28-5204        TCGA-28-5207 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5211        TCGA-28-5213 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-5214        TCGA-28-5215        TCGA-28-5216        TCGA-28-5218 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-5219        TCGA-28-5220        TCGA-28-6450        TCGA-32-1970 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-32-1977        TCGA-32-1979        TCGA-32-1980        TCGA-32-1982 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-32-1986        TCGA-32-1991        TCGA-32-2491        TCGA-32-2494 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-32-2495        TCGA-32-2615        TCGA-32-2632        TCGA-32-2634 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-32-2638        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  AGXT2L1 MUTATED        1      0      0
  AGXT2L1 WILD-TYPE    137     61     76
D149V4, multiclass
[1] "Remove cluster labels:" "AGXT2L1 MUTATED"       
clus
  AGXT2L1 MUTATED AGXT2L1 WILD-TYPE 
                1               274 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0747        TCGA-06-0749        TCGA-06-0750        TCGA-06-0875 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0876        TCGA-06-0877        TCGA-06-0878        TCGA-06-0879 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0881        TCGA-06-0882        TCGA-06-0939        TCGA-06-1804 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-1806        TCGA-06-2557        TCGA-06-2558        TCGA-06-2559 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-2561        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2569        TCGA-06-2570 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-5408        TCGA-06-5410        TCGA-06-5411        TCGA-06-5412 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-5413        TCGA-06-5414        TCGA-06-5415        TCGA-06-5417 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-5418        TCGA-06-5856        TCGA-06-5858        TCGA-06-5859 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-6388        TCGA-06-6389        TCGA-06-6390        TCGA-06-6391 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-6693        TCGA-06-6694        TCGA-06-6695        TCGA-06-6697 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-6698        TCGA-06-6699        TCGA-06-6700        TCGA-06-6701 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-08-0386        TCGA-12-0616        TCGA-12-0618        TCGA-12-0619 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-12-0688        TCGA-12-0692        TCGA-12-0821        TCGA-12-1597 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-12-3649        TCGA-12-3650        TCGA-12-3652        TCGA-12-3653 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-12-5295        TCGA-12-5299        TCGA-12-5301        TCGA-14-0740 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0862 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-14-0871        TCGA-14-1043        TCGA-14-1395        TCGA-14-1450 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5953 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-5954        TCGA-19-5955        TCGA-19-5958        TCGA-19-5959 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-5960        TCGA-26-1439        TCGA-26-1442        TCGA-26-5132 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-26-5133        TCGA-26-5134        TCGA-26-5135        TCGA-26-5136 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-26-5139        TCGA-26-6173        TCGA-26-6174        TCGA-27-1830 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-27-1831        TCGA-27-1832        TCGA-27-1833        TCGA-27-1834 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-27-1835        TCGA-27-1836        TCGA-27-1837        TCGA-27-1838 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-27-2518        TCGA-27-2519        TCGA-27-2521        TCGA-27-2523 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-27-2524        TCGA-27-2526        TCGA-27-2527        TCGA-27-2528 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-1747        TCGA-28-1753        TCGA-28-2502        TCGA-28-2509 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-2510        TCGA-28-2513        TCGA-28-5204        TCGA-28-5207 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-5208        TCGA-28-5209        TCGA-28-5211        TCGA-28-5213 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-5214        TCGA-28-5215        TCGA-28-5216        TCGA-28-5218 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-5219        TCGA-28-5220        TCGA-28-6450        TCGA-32-1970 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-32-1977        TCGA-32-1979        TCGA-32-1980        TCGA-32-1982 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-32-1986        TCGA-32-1991        TCGA-32-2491        TCGA-32-2494 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-32-2495        TCGA-32-2615        TCGA-32-2632        TCGA-32-2634 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-32-2638        TCGA-32-4208        TCGA-32-4209        TCGA-32-4210 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-32-4211        TCGA-32-4213        TCGA-32-4719        TCGA-32-5222 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-41-2571        TCGA-41-2572        TCGA-41-2573        TCGA-41-2575 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-41-3392        TCGA-41-3393        TCGA-41-3915        TCGA-41-4097 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-41-5651        TCGA-41-6646        TCGA-74-6573        TCGA-74-6575 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-74-6577        TCGA-74-6578        TCGA-74-6584        TCGA-76-4925 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-4926        TCGA-76-4927        TCGA-76-4928        TCGA-76-4929 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-4931        TCGA-76-4932        TCGA-76-4934        TCGA-76-4935 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-6191        TCGA-76-6192        TCGA-76-6193        TCGA-76-6280 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-6282        TCGA-76-6283        TCGA-76-6285        TCGA-76-6286 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-81-5911        TCGA-87-5896 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  AGXT2L1 MUTATED        3      1      0
  AGXT2L1 WILD-TYPE    289    431     62
D149V5, multiclass
        clus
vv       AGXT2L1 MUTATED AGXT2L1 WILD-TYPE
  CLUS_1               3               289
  CLUS_2               1               431
  CLUS_3               0                62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AGXT2L1 MUTATED        2      0      0      1
  AGXT2L1 WILD-TYPE    151    223     88    160
D149V6, multiclass
        clus
vv       AGXT2L1 MUTATED AGXT2L1 WILD-TYPE
  CLUS_1               2               151
  CLUS_2               0               223
  CLUS_3               0                88
  CLUS_4               1               160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AGXT2L1 MUTATED        1      1      0      0
  AGXT2L1 WILD-TYPE    184    154    138     95
D149V7, multiclass
[1] "Remove cluster labels:" "AGXT2L1 MUTATED"       
clus
  AGXT2L1 MUTATED AGXT2L1 WILD-TYPE 
                2               571 
       TCGA-02-0003        TCGA-02-2470        TCGA-02-2485        TCGA-06-0126 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0128        TCGA-06-0129        TCGA-06-0130        TCGA-06-0154 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0155        TCGA-06-0189        TCGA-06-0238        TCGA-06-0644 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0650        TCGA-06-0875        TCGA-06-0876        TCGA-06-0877 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0878        TCGA-06-0879        TCGA-06-0882        TCGA-06-0939 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-1804        TCGA-06-1806        TCGA-06-2557        TCGA-06-2558 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-2559        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2570        TCGA-06-5408 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-12-0692        TCGA-12-1597        TCGA-12-3649        TCGA-12-3650 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-12-3652        TCGA-12-3653        TCGA-12-5295        TCGA-12-5301 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0862        TCGA-14-0871        TCGA-14-1823 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-16-0846        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2625        TCGA-19-2631        TCGA-19-4068 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-5947        TCGA-19-5950        TCGA-19-5951        TCGA-19-5952 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-5953        TCGA-19-5954        TCGA-19-5955        TCGA-19-5958 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-5959        TCGA-19-5960        TCGA-26-1442        TCGA-26-5132 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-26-5133        TCGA-26-5134        TCGA-26-6173        TCGA-26-6174 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1836        TCGA-27-2518        TCGA-27-2528 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-1747        TCGA-28-1753        TCGA-28-2501        TCGA-28-5208 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-5214        TCGA-32-1970        TCGA-32-1982        TCGA-32-1986 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-32-1991        TCGA-32-4210        TCGA-32-4211        TCGA-32-5222 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-41-6646 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-74-6573        TCGA-74-6575        TCGA-74-6577        TCGA-74-6578 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-74-6584        TCGA-76-4926        TCGA-76-4927        TCGA-76-4928 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-4929        TCGA-76-4931        TCGA-76-4932        TCGA-76-6192 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-6193        TCGA-76-6282        TCGA-76-6283        TCGA-76-6285 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-CS-4938        TCGA-CS-4942        TCGA-CS-4943        TCGA-CS-4944 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-CS-5390        TCGA-CS-5393        TCGA-CS-5394        TCGA-CS-5396 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-CS-5397        TCGA-CS-6186        TCGA-CS-6188        TCGA-CS-6665 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-CS-6666        TCGA-CS-6668        TCGA-CS-6669        TCGA-CS-6670 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274        TCGA-DB-5275 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278        TCGA-DB-5279 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DB-5280        TCGA-DB-5281        TCGA-DB-A4X9        TCGA-DB-A4XA 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DB-A4XB        TCGA-DB-A4XC        TCGA-DB-A4XD        TCGA-DB-A4XE 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DB-A4XF        TCGA-DB-A4XG        TCGA-DB-A4XH        TCGA-DB-A64L 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DB-A64O        TCGA-DB-A64P        TCGA-DB-A64Q        TCGA-DB-A64R 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DB-A64S        TCGA-DB-A64U        TCGA-DB-A64V        TCGA-DB-A64W 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DB-A64X        TCGA-DB-A75K        TCGA-DB-A75L        TCGA-DB-A75M 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DB-A75O        TCGA-DB-A75P        TCGA-DH-5140        TCGA-DH-5141 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DH-5142        TCGA-DH-5143        TCGA-DH-5144        TCGA-DH-A66B 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DH-A66D        TCGA-DH-A66F        TCGA-DH-A66G        TCGA-DH-A7US 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-5847        TCGA-DU-5849        TCGA-DU-5851        TCGA-DU-5852 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-5853        TCGA-DU-5854        TCGA-DU-5855        TCGA-DU-5870 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-5871        TCGA-DU-5872        TCGA-DU-5874        TCGA-DU-6393 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-6394        TCGA-DU-6395        TCGA-DU-6396        TCGA-DU-6397 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-6399        TCGA-DU-6400        TCGA-DU-6401        TCGA-DU-6402 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-6403        TCGA-DU-6404        TCGA-DU-6405        TCGA-DU-6406 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-6407        TCGA-DU-6408        TCGA-DU-6410        TCGA-DU-6542 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-7006        TCGA-DU-7007        TCGA-DU-7008        TCGA-DU-7009 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-7010        TCGA-DU-7011        TCGA-DU-7012        TCGA-DU-7013 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-7014        TCGA-DU-7015        TCGA-DU-7018        TCGA-DU-7019 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-7290        TCGA-DU-7292        TCGA-DU-7294        TCGA-DU-7298 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-7300        TCGA-DU-7301        TCGA-DU-7302        TCGA-DU-7304 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-7306        TCGA-DU-7309        TCGA-DU-8158        TCGA-DU-8161 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-8162        TCGA-DU-8163        TCGA-DU-8164        TCGA-DU-8165 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-8166        TCGA-DU-8167        TCGA-DU-8168        TCGA-DU-A5TP 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-A5TR        TCGA-DU-A5TS        TCGA-DU-A5TT        TCGA-DU-A5TU 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-A5TW        TCGA-DU-A5TY        TCGA-DU-A6S2        TCGA-DU-A6S3 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L        TCGA-DU-A76O 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7TA        TCGA-DU-A7TB 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-A7TD        TCGA-DU-A7TG        TCGA-DU-A7TI        TCGA-DU-A7TJ 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-E1-5302        TCGA-E1-5303        TCGA-E1-5304        TCGA-E1-5305 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-E1-5307        TCGA-E1-5311        TCGA-E1-5318        TCGA-E1-5319 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-E1-5322        TCGA-E1-A7YH        TCGA-E1-A7YI        TCGA-E1-A7YJ 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-E1-A7YL        TCGA-E1-A7YM        TCGA-E1-A7YN        TCGA-E1-A7YQ 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-E1-A7YS        TCGA-E1-A7YV        TCGA-E1-A7YW        TCGA-E1-A7YY 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-E1-A7Z2        TCGA-E1-A7Z3        TCGA-E1-A7Z6        TCGA-EZ-7264 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-F6-A8O3        TCGA-F6-A8O4        TCGA-FG-5962        TCGA-FG-5963 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-FG-5964        TCGA-FG-5965        TCGA-FG-6688        TCGA-FG-6689 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-FG-6690        TCGA-FG-6691        TCGA-FG-7634        TCGA-FG-7636 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-FG-7637        TCGA-FG-7638        TCGA-FG-7641        TCGA-FG-7643 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-FG-8181        TCGA-FG-8182        TCGA-FG-8185        TCGA-FG-8186 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-FG-8187        TCGA-FG-8188        TCGA-FG-8189        TCGA-FG-8191 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-FG-A4MT        TCGA-FG-A4MU        TCGA-FG-A4MW        TCGA-FG-A4MX 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-FG-A4MY        TCGA-FG-A60J        TCGA-FG-A60L        TCGA-FG-A6IZ 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-FG-A6J3        TCGA-FG-A70Y        TCGA-FG-A70Z        TCGA-FG-A710 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-FG-A713        TCGA-FG-A87N        TCGA-FG-A87Q        TCGA-HT-7467 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7468        TCGA-HT-7469        TCGA-HT-7470        TCGA-HT-7471 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7472        TCGA-HT-7473        TCGA-HT-7474        TCGA-HT-7475 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7476        TCGA-HT-7477        TCGA-HT-7478        TCGA-HT-7479 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7480        TCGA-HT-7481        TCGA-HT-7482        TCGA-HT-7483 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7485        TCGA-HT-7601        TCGA-HT-7602        TCGA-HT-7603 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7604        TCGA-HT-7605        TCGA-HT-7606        TCGA-HT-7607 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7608        TCGA-HT-7609        TCGA-HT-7610        TCGA-HT-7611 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7616        TCGA-HT-7620        TCGA-HT-7676        TCGA-HT-7677 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7680        TCGA-HT-7681        TCGA-HT-7684        TCGA-HT-7686 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7687        TCGA-HT-7688        TCGA-HT-7689        TCGA-HT-7690 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7691        TCGA-HT-7692        TCGA-HT-7693        TCGA-HT-7694 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7695        TCGA-HT-7854        TCGA-HT-7855        TCGA-HT-7856 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7857        TCGA-HT-7858        TCGA-HT-7860        TCGA-HT-7873 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7874        TCGA-HT-7875        TCGA-HT-7877        TCGA-HT-7879 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7880        TCGA-HT-7881        TCGA-HT-7882        TCGA-HT-7884 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7902        TCGA-HT-8010        TCGA-HT-8011        TCGA-HT-8012 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-8013        TCGA-HT-8015        TCGA-HT-8018        TCGA-HT-8019 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-8104        TCGA-HT-8105        TCGA-HT-8106        TCGA-HT-8107 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-8109        TCGA-HT-8110        TCGA-HT-8111        TCGA-HT-8113 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-8114        TCGA-HT-8558        TCGA-HT-8564        TCGA-HT-A4DV 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-A5R5        TCGA-HT-A5R7        TCGA-HT-A5R9        TCGA-HT-A5RB 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-A614        TCGA-HT-A615        TCGA-HT-A616        TCGA-HT-A617 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-A618        TCGA-HT-A619        TCGA-HT-A61A        TCGA-HT-A61B 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-A74H        TCGA-HT-A74J        TCGA-HT-A74L        TCGA-HT-A74O 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HW-7486        TCGA-HW-7487        TCGA-HW-7489        TCGA-HW-7490 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HW-7491        TCGA-HW-7493        TCGA-HW-7495        TCGA-HW-8319 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HW-8320        TCGA-HW-8321        TCGA-HW-8322        TCGA-HW-A5KJ 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HW-A5KK        TCGA-HW-A5KM        TCGA-IK-7675        TCGA-IK-8125 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-KT-A74X        TCGA-P5-A5ET        TCGA-P5-A5EU        TCGA-P5-A5EV 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-P5-A5EW        TCGA-P5-A5EX        TCGA-P5-A5EY        TCGA-P5-A5EZ 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-P5-A5F0        TCGA-P5-A5F1        TCGA-P5-A5F2        TCGA-P5-A5F4 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-P5-A5F6        TCGA-P5-A72U        TCGA-P5-A72W        TCGA-P5-A72X 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-P5-A72Z        TCGA-P5-A730        TCGA-P5-A731        TCGA-P5-A733 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-P5-A735        TCGA-P5-A736        TCGA-P5-A737        TCGA-P5-A77W 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65S        TCGA-QH-A65V 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-QH-A65X        TCGA-QH-A65Z        TCGA-QH-A6CS        TCGA-QH-A6CU 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-QH-A6CV        TCGA-QH-A6CW        TCGA-QH-A6CX        TCGA-QH-A6CY 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-QH-A6CZ        TCGA-QH-A6X4        TCGA-QH-A6X5        TCGA-QH-A6X8 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-QH-A6X9        TCGA-QH-A6XA        TCGA-QH-A6XC        TCGA-QH-A86X 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-QH-A870        TCGA-R8-A6MK        TCGA-R8-A6ML        TCGA-R8-A6MO 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-R8-A6YH        TCGA-RY-A83X        TCGA-RY-A83Y        TCGA-RY-A83Z 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-RY-A843        TCGA-RY-A845        TCGA-S9-A6TS        TCGA-S9-A6TU 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-S9-A6TV        TCGA-S9-A6TX        TCGA-S9-A6TY        TCGA-S9-A6U0 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-S9-A6U1        TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U9 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-S9-A6WD        TCGA-S9-A6WE        TCGA-S9-A6WG        TCGA-S9-A6WH 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-S9-A6WN        TCGA-S9-A6WP        TCGA-S9-A6WQ        TCGA-S9-A7IQ 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-S9-A7IS        TCGA-S9-A7IY        TCGA-S9-A7IZ        TCGA-S9-A7J0 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-S9-A7J1        TCGA-S9-A7J2        TCGA-S9-A7QX        TCGA-S9-A7QZ 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-S9-A7R1        TCGA-S9-A7R4        TCGA-S9-A7R8        TCGA-TM-A7C5 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-TM-A84R        TCGA-TM-A84S        TCGA-TQ-A7RF        TCGA-TQ-A7RG 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-TQ-A7RH        TCGA-TQ-A7RK        TCGA-TQ-A7RN        TCGA-TQ-A7RQ 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RV        TCGA-TQ-A7RW 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9        TCGA-VM-A8CA 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE        TCGA-VM-A8CH 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-VV-A829        TCGA-VV-A86M        TCGA-VW-A7QS        TCGA-W9-A837 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-WY-A85B        TCGA-WY-A85C        TCGA-WY-A85D 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  AGXT2L1 MUTATED        1      0      1
  AGXT2L1 WILD-TYPE    204    220    147
D149V8, multiclass
[1] "Remove cluster labels:" "AGXT2L1 MUTATED"       
clus
  AGXT2L1 MUTATED AGXT2L1 WILD-TYPE 
                2               571 
       TCGA-02-0003        TCGA-02-2470        TCGA-02-2485        TCGA-06-0126 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0128        TCGA-06-0129        TCGA-06-0130        TCGA-06-0154 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0155        TCGA-06-0189        TCGA-06-0238        TCGA-06-0644 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0650        TCGA-06-0875        TCGA-06-0876        TCGA-06-0877 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-0878        TCGA-06-0879        TCGA-06-0882        TCGA-06-0939 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-1804        TCGA-06-1806        TCGA-06-2557        TCGA-06-2558 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-2559        TCGA-06-2562        TCGA-06-2563        TCGA-06-2564 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-2565        TCGA-06-2567        TCGA-06-2570        TCGA-06-5408 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-12-0692        TCGA-12-1597        TCGA-12-3649        TCGA-12-3650 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-12-3652        TCGA-12-3653        TCGA-12-5295        TCGA-12-5301 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0862        TCGA-14-0871        TCGA-14-1823 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-16-0846        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2625        TCGA-19-2631        TCGA-19-4068 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-5947        TCGA-19-5950        TCGA-19-5951        TCGA-19-5952 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-5953        TCGA-19-5954        TCGA-19-5955        TCGA-19-5958 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-19-5959        TCGA-19-5960        TCGA-26-1442        TCGA-26-5132 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-26-5133        TCGA-26-5134        TCGA-26-6173        TCGA-26-6174 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-27-1830        TCGA-27-1831        TCGA-27-1832        TCGA-27-1833 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-27-1834        TCGA-27-1836        TCGA-27-2518        TCGA-27-2528 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-1747        TCGA-28-1753        TCGA-28-2501        TCGA-28-5208 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-28-5214        TCGA-32-1970        TCGA-32-1982        TCGA-32-1986 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-32-1991        TCGA-32-4210        TCGA-32-4211        TCGA-32-5222 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-41-2573        TCGA-41-2575        TCGA-41-3392        TCGA-41-3393 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-41-3915        TCGA-41-4097        TCGA-41-5651        TCGA-41-6646 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-74-6573        TCGA-74-6575        TCGA-74-6577        TCGA-74-6578 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-74-6584        TCGA-76-4926        TCGA-76-4927        TCGA-76-4928 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-4929        TCGA-76-4931        TCGA-76-4932        TCGA-76-6192 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-6193        TCGA-76-6282        TCGA-76-6283        TCGA-76-6285 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-6656        TCGA-76-6657        TCGA-76-6660        TCGA-76-6661 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-76-6662        TCGA-76-6663        TCGA-76-6664        TCGA-81-5910 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-CS-4938        TCGA-CS-4942        TCGA-CS-4943        TCGA-CS-4944 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-CS-5390        TCGA-CS-5393        TCGA-CS-5394        TCGA-CS-5396 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-CS-5397        TCGA-CS-6186        TCGA-CS-6188        TCGA-CS-6665 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-CS-6666        TCGA-CS-6668        TCGA-CS-6669        TCGA-CS-6670 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DB-5270        TCGA-DB-5273        TCGA-DB-5274        TCGA-DB-5275 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DB-5276        TCGA-DB-5277        TCGA-DB-5278        TCGA-DB-5279 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DB-5280        TCGA-DB-5281        TCGA-DB-A4X9        TCGA-DB-A4XA 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DB-A4XB        TCGA-DB-A4XC        TCGA-DB-A4XD        TCGA-DB-A4XE 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DB-A4XF        TCGA-DB-A4XG        TCGA-DB-A4XH        TCGA-DB-A64L 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DB-A64O        TCGA-DB-A64P        TCGA-DB-A64Q        TCGA-DB-A64R 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DB-A64S        TCGA-DB-A64U        TCGA-DB-A64V        TCGA-DB-A64W 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DB-A64X        TCGA-DB-A75K        TCGA-DB-A75L        TCGA-DB-A75M 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DB-A75O        TCGA-DB-A75P        TCGA-DH-5140        TCGA-DH-5141 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DH-5142        TCGA-DH-5143        TCGA-DH-5144        TCGA-DH-A66B 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DH-A66D        TCGA-DH-A66F        TCGA-DH-A66G        TCGA-DH-A7US 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-5847        TCGA-DU-5849        TCGA-DU-5851        TCGA-DU-5852 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-5853        TCGA-DU-5854        TCGA-DU-5855        TCGA-DU-5870 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-5871        TCGA-DU-5872        TCGA-DU-5874        TCGA-DU-6393 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-6394        TCGA-DU-6395        TCGA-DU-6396        TCGA-DU-6397 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-6399        TCGA-DU-6400        TCGA-DU-6401        TCGA-DU-6402 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-6403        TCGA-DU-6404        TCGA-DU-6405        TCGA-DU-6406 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-6407        TCGA-DU-6408        TCGA-DU-6410        TCGA-DU-6542 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-7006        TCGA-DU-7007        TCGA-DU-7008        TCGA-DU-7009 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-7010        TCGA-DU-7011        TCGA-DU-7012        TCGA-DU-7013 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-7014        TCGA-DU-7015        TCGA-DU-7018        TCGA-DU-7019 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-7290        TCGA-DU-7292        TCGA-DU-7294        TCGA-DU-7298 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-7300        TCGA-DU-7301        TCGA-DU-7302        TCGA-DU-7304 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-7306        TCGA-DU-7309        TCGA-DU-8158        TCGA-DU-8161 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-8162        TCGA-DU-8163        TCGA-DU-8164        TCGA-DU-8165 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-8166        TCGA-DU-8167        TCGA-DU-8168        TCGA-DU-A5TP 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-A5TR        TCGA-DU-A5TS        TCGA-DU-A5TT        TCGA-DU-A5TU 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-A5TW        TCGA-DU-A5TY        TCGA-DU-A6S2        TCGA-DU-A6S3 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-A6S8        TCGA-DU-A76K        TCGA-DU-A76L        TCGA-DU-A76O 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-A76R        TCGA-DU-A7T6        TCGA-DU-A7TA        TCGA-DU-A7TB 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-DU-A7TD        TCGA-DU-A7TG        TCGA-DU-A7TI        TCGA-DU-A7TJ 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-E1-5302        TCGA-E1-5303        TCGA-E1-5304        TCGA-E1-5305 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-E1-5307        TCGA-E1-5311        TCGA-E1-5318        TCGA-E1-5319 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-E1-5322        TCGA-E1-A7YH        TCGA-E1-A7YI        TCGA-E1-A7YJ 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-E1-A7YL        TCGA-E1-A7YM        TCGA-E1-A7YN        TCGA-E1-A7YQ 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-E1-A7YS        TCGA-E1-A7YV        TCGA-E1-A7YW        TCGA-E1-A7YY 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-E1-A7Z2        TCGA-E1-A7Z3        TCGA-E1-A7Z6        TCGA-EZ-7264 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-F6-A8O3        TCGA-F6-A8O4        TCGA-FG-5962        TCGA-FG-5963 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-FG-5964        TCGA-FG-5965        TCGA-FG-6688        TCGA-FG-6689 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-FG-6690        TCGA-FG-6691        TCGA-FG-7634        TCGA-FG-7636 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-FG-7637        TCGA-FG-7638        TCGA-FG-7641        TCGA-FG-7643 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-FG-8181        TCGA-FG-8182        TCGA-FG-8185        TCGA-FG-8186 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-FG-8187        TCGA-FG-8188        TCGA-FG-8189        TCGA-FG-8191 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-FG-A4MT        TCGA-FG-A4MU        TCGA-FG-A4MW        TCGA-FG-A4MX 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-FG-A4MY        TCGA-FG-A60J        TCGA-FG-A60L        TCGA-FG-A6IZ 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-FG-A6J3        TCGA-FG-A70Y        TCGA-FG-A70Z        TCGA-FG-A710 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-FG-A713        TCGA-FG-A87N        TCGA-FG-A87Q        TCGA-HT-7467 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7468        TCGA-HT-7469        TCGA-HT-7470        TCGA-HT-7471 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7472        TCGA-HT-7473        TCGA-HT-7474        TCGA-HT-7475 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7476        TCGA-HT-7477        TCGA-HT-7478        TCGA-HT-7479 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7480        TCGA-HT-7481        TCGA-HT-7482        TCGA-HT-7483 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7485        TCGA-HT-7601        TCGA-HT-7602        TCGA-HT-7603 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7604        TCGA-HT-7605        TCGA-HT-7606        TCGA-HT-7607 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7608        TCGA-HT-7609        TCGA-HT-7610        TCGA-HT-7611 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7616        TCGA-HT-7620        TCGA-HT-7676        TCGA-HT-7677 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7680        TCGA-HT-7681        TCGA-HT-7684        TCGA-HT-7686 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7687        TCGA-HT-7688        TCGA-HT-7689        TCGA-HT-7690 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7691        TCGA-HT-7692        TCGA-HT-7693        TCGA-HT-7694 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7695        TCGA-HT-7854        TCGA-HT-7855        TCGA-HT-7856 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7857        TCGA-HT-7858        TCGA-HT-7860        TCGA-HT-7873 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7874        TCGA-HT-7875        TCGA-HT-7877        TCGA-HT-7879 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7880        TCGA-HT-7881        TCGA-HT-7882        TCGA-HT-7884 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-7902        TCGA-HT-8010        TCGA-HT-8011        TCGA-HT-8012 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-8013        TCGA-HT-8015        TCGA-HT-8018        TCGA-HT-8019 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-8104        TCGA-HT-8105        TCGA-HT-8106        TCGA-HT-8107 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-8109        TCGA-HT-8110        TCGA-HT-8111        TCGA-HT-8113 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-8114        TCGA-HT-8558        TCGA-HT-8564        TCGA-HT-A4DV 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-A5R5        TCGA-HT-A5R7        TCGA-HT-A5R9        TCGA-HT-A5RB 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-A614        TCGA-HT-A615        TCGA-HT-A616        TCGA-HT-A617 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-A618        TCGA-HT-A619        TCGA-HT-A61A        TCGA-HT-A61B 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HT-A74H        TCGA-HT-A74J        TCGA-HT-A74L        TCGA-HT-A74O 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HW-7486        TCGA-HW-7487        TCGA-HW-7489        TCGA-HW-7490 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HW-7491        TCGA-HW-7493        TCGA-HW-7495        TCGA-HW-8319 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HW-8320        TCGA-HW-8321        TCGA-HW-8322        TCGA-HW-A5KJ 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-HW-A5KK        TCGA-HW-A5KM        TCGA-IK-7675        TCGA-IK-8125 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-KT-A74X        TCGA-P5-A5ET        TCGA-P5-A5EU        TCGA-P5-A5EV 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-P5-A5EW        TCGA-P5-A5EX        TCGA-P5-A5EY        TCGA-P5-A5EZ 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-P5-A5F0        TCGA-P5-A5F1        TCGA-P5-A5F2        TCGA-P5-A5F4 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-P5-A5F6        TCGA-P5-A72U        TCGA-P5-A72W        TCGA-P5-A72X 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-P5-A72Z        TCGA-P5-A730        TCGA-P5-A731        TCGA-P5-A733 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-P5-A735        TCGA-P5-A736        TCGA-P5-A737        TCGA-P5-A77W 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-P5-A780        TCGA-P5-A781        TCGA-QH-A65S        TCGA-QH-A65V 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-QH-A65X        TCGA-QH-A65Z        TCGA-QH-A6CS        TCGA-QH-A6CU 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-QH-A6CV        TCGA-QH-A6CW        TCGA-QH-A6CX        TCGA-QH-A6CY 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-QH-A6CZ        TCGA-QH-A6X4        TCGA-QH-A6X5        TCGA-QH-A6X8 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-QH-A6X9        TCGA-QH-A6XA        TCGA-QH-A6XC        TCGA-QH-A86X 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-QH-A870        TCGA-R8-A6MK        TCGA-R8-A6ML        TCGA-R8-A6MO 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-R8-A6YH        TCGA-RY-A83X        TCGA-RY-A83Y        TCGA-RY-A83Z 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-RY-A843        TCGA-RY-A845        TCGA-S9-A6TS        TCGA-S9-A6TU 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-S9-A6TV        TCGA-S9-A6TX        TCGA-S9-A6TY        TCGA-S9-A6U0 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-S9-A6U1        TCGA-S9-A6U5        TCGA-S9-A6U6        TCGA-S9-A6U9 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-S9-A6WD        TCGA-S9-A6WE        TCGA-S9-A6WG        TCGA-S9-A6WH 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-S9-A6WN        TCGA-S9-A6WP        TCGA-S9-A6WQ        TCGA-S9-A7IQ 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-S9-A7IS        TCGA-S9-A7IY        TCGA-S9-A7IZ        TCGA-S9-A7J0 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-S9-A7J1        TCGA-S9-A7J2        TCGA-S9-A7QX        TCGA-S9-A7QZ 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-S9-A7R1        TCGA-S9-A7R4        TCGA-S9-A7R8        TCGA-TM-A7C5 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-TM-A84R        TCGA-TM-A84S        TCGA-TQ-A7RF        TCGA-TQ-A7RG 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-TQ-A7RH        TCGA-TQ-A7RK        TCGA-TQ-A7RN        TCGA-TQ-A7RQ 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-TQ-A7RR        TCGA-TQ-A7RS        TCGA-TQ-A7RV        TCGA-TQ-A7RW 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-TQ-A8XE        TCGA-VM-A8C8        TCGA-VM-A8C9        TCGA-VM-A8CA 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-VM-A8CB        TCGA-VM-A8CD        TCGA-VM-A8CE        TCGA-VM-A8CH 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-VV-A829        TCGA-VV-A86M        TCGA-VW-A7QS        TCGA-W9-A837 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
       TCGA-WY-A85B        TCGA-WY-A85C        TCGA-WY-A85D 
"AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" "AGXT2L1 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  AGXT2L1 MUTATED        3      1      0
  AGXT2L1 WILD-TYPE    235    190    228
D149V9, multiclass
        clus
vv       AGXT2L1 MUTATED AGXT2L1 WILD-TYPE
  CLUS_1               3               235
  CLUS_2               1               190
  CLUS_3               0               228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  AGXT2L1 MUTATED        2      1      1
  AGXT2L1 WILD-TYPE    194    190    269
D149V10, multiclass
        clus
vv       AGXT2L1 MUTATED AGXT2L1 WILD-TYPE
  CLUS_1               2               194
  CLUS_2               1               190
  CLUS_3               1               269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AGXT2L1 MUTATED        1      1      0      1
  AGXT2L1 WILD-TYPE    139    106     83    181
D149V11, multiclass
        clus
vv       AGXT2L1 MUTATED AGXT2L1 WILD-TYPE
  CLUS_1               1               139
  CLUS_2               1               106
  CLUS_3               0                83
  CLUS_4               1               181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  AGXT2L1 MUTATED        1      1      1
  AGXT2L1 WILD-TYPE    222    185    102
D149V12, multiclass
        clus
vv       AGXT2L1 MUTATED AGXT2L1 WILD-TYPE
  CLUS_1               1               222
  CLUS_2               1               185
  CLUS_3               1               102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AGXT2L1 MUTATED        0      1      0      2
  AGXT2L1 WILD-TYPE    127    118    106    154
D149V13, multiclass
        clus
vv       AGXT2L1 MUTATED AGXT2L1 WILD-TYPE
  CLUS_1               0               127
  CLUS_2               1               118
  CLUS_3               0               106
  CLUS_4               2               154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AGXT2L1 MUTATED        1      0      1      0      0      1
  AGXT2L1 WILD-TYPE     98     77    119     57     63     91
D149V14, multiclass
        clus
vv       AGXT2L1 MUTATED AGXT2L1 WILD-TYPE
  CLUS_1               1                98
  CLUS_2               0                77
  CLUS_3               1               119
  CLUS_4               0                57
  CLUS_5               0                63
  CLUS_6               1                91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(150) Variable = PRKCD MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRKCD MUTATED        0      2      1      0
  PRKCD WILD-TYPE     78     39     63     57
D150V1, multiclass
        clus
vv       PRKCD MUTATED PRKCD WILD-TYPE
  CLUS_1             0              78
  CLUS_2             2              39
  CLUS_3             1              63
  CLUS_4             0              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRKCD MUTATED        0      2      1      0
  PRKCD WILD-TYPE     63     48     47     79
D150V2, multiclass
        clus
vv       PRKCD MUTATED PRKCD WILD-TYPE
  CLUS_1             0              63
  CLUS_2             2              48
  CLUS_3             1              47
  CLUS_4             0              79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRKCD MUTATED        0      3      0      0
  PRKCD WILD-TYPE     70     95     44     63
D150V3, multiclass
        clus
vv       PRKCD MUTATED PRKCD WILD-TYPE
  CLUS_1             0              70
  CLUS_2             3              95
  CLUS_3             0              44
  CLUS_4             0              63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRKCD MUTATED        2      0      1
  PRKCD WILD-TYPE    136     61     75
D150V4, multiclass
        clus
vv       PRKCD MUTATED PRKCD WILD-TYPE
  CLUS_1             2             136
  CLUS_2             0              61
  CLUS_3             1              75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRKCD MUTATED        2      0      1
  PRKCD WILD-TYPE    290    432     61
D150V5, multiclass
        clus
vv       PRKCD MUTATED PRKCD WILD-TYPE
  CLUS_1             2             290
  CLUS_2             0             432
  CLUS_3             1              61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRKCD MUTATED        1      0      0      0
  PRKCD WILD-TYPE    152    223     88    161
D150V6, multiclass
[1] "Remove cluster labels:" "PRKCD MUTATED"         
clus
  PRKCD MUTATED PRKCD WILD-TYPE 
              1             624 
     TCGA-06-0152      TCGA-06-0650      TCGA-06-1804      TCGA-06-1806 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0862      TCGA-14-1043      TCGA-14-1395 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-14-1450      TCGA-15-1444      TCGA-19-5947      TCGA-19-5950 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-19-5951      TCGA-19-5952      TCGA-19-5953      TCGA-19-5954 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-26-1442      TCGA-26-5132      TCGA-26-5134      TCGA-26-5135 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-26-5136      TCGA-26-5139      TCGA-26-6173      TCGA-26-6174 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-2501      TCGA-28-2510      TCGA-28-5204      TCGA-28-5207 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1979 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-32-1980      TCGA-32-5222      TCGA-41-5651      TCGA-41-6646 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-74-6573      TCGA-74-6575      TCGA-74-6577      TCGA-74-6578 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-74-6584      TCGA-76-4925      TCGA-76-4926      TCGA-76-4927 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-4928      TCGA-76-4929      TCGA-76-4931      TCGA-76-4932 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-4934      TCGA-76-4935      TCGA-76-6191      TCGA-76-6192 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-6193      TCGA-76-6280      TCGA-76-6282      TCGA-76-6283 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-6285      TCGA-76-6286      TCGA-76-6656      TCGA-76-6657 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-6660      TCGA-76-6661      TCGA-76-6662      TCGA-76-6663 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-6664      TCGA-81-5910      TCGA-81-5911      TCGA-87-5896 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014      TCGA-DU-7015 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A74H      TCGA-HT-A74J      TCGA-HT-A74K      TCGA-HT-A74L 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6U9      TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A7C4      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRKCD MUTATED        1      0      0      0
  PRKCD WILD-TYPE    184    155    138     95
D150V7, multiclass
[1] "Remove cluster labels:" "PRKCD MUTATED"         
clus
  PRKCD MUTATED PRKCD WILD-TYPE 
              1             572 
     TCGA-02-0003      TCGA-02-2470      TCGA-02-2485      TCGA-06-0126 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0128      TCGA-06-0129      TCGA-06-0130      TCGA-06-0154 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0155      TCGA-06-0189      TCGA-06-0238      TCGA-06-0644 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0650      TCGA-06-0875      TCGA-06-0876      TCGA-06-0877 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0879      TCGA-06-0882      TCGA-06-0939 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-1804      TCGA-06-1806      TCGA-06-2557      TCGA-06-2558 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-2559      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2570      TCGA-06-5408 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-12-0692      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5301 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0862      TCGA-14-0871      TCGA-14-1823 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-16-0846      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2625      TCGA-19-2631      TCGA-19-4068 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-19-5953      TCGA-19-5954      TCGA-19-5955      TCGA-19-5958 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-19-5959      TCGA-19-5960      TCGA-26-1442      TCGA-26-5132 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-26-5134      TCGA-26-6173      TCGA-26-6174      TCGA-27-1830 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-27-1836      TCGA-27-2518      TCGA-27-2528      TCGA-28-1747 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2501      TCGA-28-5208      TCGA-28-5214 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-5222      TCGA-41-2573 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-41-6646      TCGA-74-6573 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-74-6575      TCGA-74-6577      TCGA-74-6578      TCGA-74-6584 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-6192      TCGA-76-6193 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6656 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-CS-4938 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-4942      TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-5393      TCGA-CS-5394      TCGA-CS-5396      TCGA-CS-5397 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6665      TCGA-CS-6666 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5280 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M      TCGA-DB-A75O 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A66B      TCGA-DH-A66D 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7US      TCGA-DU-5847 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7011      TCGA-DU-7012      TCGA-DU-7013 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7014      TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7TA      TCGA-DU-A7TB 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YQ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z6      TCGA-EZ-7264 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-7634      TCGA-FG-7636 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60L      TCGA-FG-A6IZ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-HT-7467 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8564      TCGA-HT-A4DV 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RB 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A74H      TCGA-HT-A74J      TCGA-HT-A74L      TCGA-HT-A74O 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-KT-A74X      TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5F6      TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A735      TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65S 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X4      TCGA-QH-A6X5 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-RY-A83X      TCGA-RY-A83Y 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-RY-A83Z      TCGA-RY-A843      TCGA-RY-A845      TCGA-S9-A6TS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TX      TCGA-S9-A6TY 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U5      TCGA-S9-A6U6 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6U9      TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6WH      TCGA-S9-A6WN      TCGA-S9-A6WP      TCGA-S9-A6WQ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IY      TCGA-S9-A7IZ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7QX 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R4      TCGA-S9-A7R8 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TQ-A7RF 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RG      TCGA-TQ-A7RH      TCGA-TQ-A7RK      TCGA-TQ-A7RN 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RV 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-W9-A837      TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRKCD MUTATED        1      0      0
  PRKCD WILD-TYPE    204    220    148
D150V8, multiclass
[1] "Remove cluster labels:" "PRKCD MUTATED"         
clus
  PRKCD MUTATED PRKCD WILD-TYPE 
              1             572 
     TCGA-02-0003      TCGA-02-2470      TCGA-02-2485      TCGA-06-0126 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0128      TCGA-06-0129      TCGA-06-0130      TCGA-06-0154 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0155      TCGA-06-0189      TCGA-06-0238      TCGA-06-0644 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0650      TCGA-06-0875      TCGA-06-0876      TCGA-06-0877 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0879      TCGA-06-0882      TCGA-06-0939 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-1804      TCGA-06-1806      TCGA-06-2557      TCGA-06-2558 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-2559      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2570      TCGA-06-5408 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6388 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-6389      TCGA-06-6390      TCGA-06-6391      TCGA-06-6693 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-6694      TCGA-06-6695      TCGA-06-6697      TCGA-06-6698 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-6699      TCGA-06-6700      TCGA-06-6701      TCGA-08-0386 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-12-0692      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5301 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-14-0813      TCGA-14-0862      TCGA-14-0871      TCGA-14-1823 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-16-0846      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2625      TCGA-19-2631      TCGA-19-4068 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-19-5953      TCGA-19-5954      TCGA-19-5955      TCGA-19-5958 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-19-5959      TCGA-19-5960      TCGA-26-1442      TCGA-26-5132 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-26-5134      TCGA-26-6173      TCGA-26-6174      TCGA-27-1830 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1833      TCGA-27-1834 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-27-1836      TCGA-27-2518      TCGA-27-2528      TCGA-28-1747 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2501      TCGA-28-5208      TCGA-28-5214 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-32-1970      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-5222      TCGA-41-2573 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-41-6646      TCGA-74-6573 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-74-6575      TCGA-74-6577      TCGA-74-6578      TCGA-74-6584 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-6192      TCGA-76-6193 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6656 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-6657      TCGA-76-6660      TCGA-76-6661      TCGA-76-6662 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-6663      TCGA-76-6664      TCGA-81-5910      TCGA-CS-4938 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-4942      TCGA-CS-4943      TCGA-CS-4944      TCGA-CS-5390 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-5393      TCGA-CS-5394      TCGA-CS-5396      TCGA-CS-5397 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-6186      TCGA-CS-6188      TCGA-CS-6665      TCGA-CS-6666 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670      TCGA-DB-5270 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275      TCGA-DB-5276 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279      TCGA-DB-5280 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M      TCGA-DB-A75O 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A66B      TCGA-DH-A66D 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7US      TCGA-DU-5847 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6392      TCGA-DU-6393 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7011      TCGA-DU-7012      TCGA-DU-7013 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7014      TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7290      TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L      TCGA-DU-A76O 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7TA      TCGA-DU-A7TB 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A7TD      TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-5302      TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-5307      TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-5322      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN      TCGA-E1-A7YQ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YS      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z6      TCGA-EZ-7264 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-7634      TCGA-FG-7636 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641      TCGA-FG-7643 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185      TCGA-FG-8186 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189      TCGA-FG-8191 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW      TCGA-FG-A4MX 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60L      TCGA-FG-A6IZ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-HT-7467 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470      TCGA-HT-7471 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474      TCGA-HT-7475 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478      TCGA-HT-7479 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482      TCGA-HT-7483 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602      TCGA-HT-7603 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606      TCGA-HT-7607 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610      TCGA-HT-7611 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676      TCGA-HT-7677 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684      TCGA-HT-7686 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689      TCGA-HT-7690 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693      TCGA-HT-7694 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855      TCGA-HT-7856 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860      TCGA-HT-7873 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877      TCGA-HT-7879 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882      TCGA-HT-7884 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011      TCGA-HT-8012 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018      TCGA-HT-8019 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106      TCGA-HT-8107 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8109      TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8114      TCGA-HT-8558      TCGA-HT-8564      TCGA-HT-A4DV 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RB 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A614      TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A618      TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A74H      TCGA-HT-A74J      TCGA-HT-A74L      TCGA-HT-A74O 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-KT-A74X      TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5F6      TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A735      TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A77X      TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65S 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X4      TCGA-QH-A6X5 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-RY-A83X      TCGA-RY-A83Y 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-RY-A83Z      TCGA-RY-A843      TCGA-RY-A845      TCGA-S9-A6TS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TX      TCGA-S9-A6TY 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U5      TCGA-S9-A6U6 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6U9      TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6WH      TCGA-S9-A6WN      TCGA-S9-A6WP      TCGA-S9-A6WQ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IY      TCGA-S9-A7IZ 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7QX 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R4      TCGA-S9-A7R8 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A7C5      TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TQ-A7RF 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RG      TCGA-TQ-A7RH      TCGA-TQ-A7RK      TCGA-TQ-A7RN 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RV 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-W9-A837      TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRKCD MUTATED        1      0      0
  PRKCD WILD-TYPE    237    191    228
D150V9, multiclass
[1] "Remove cluster labels:" "PRKCD MUTATED"         
clus
  PRKCD MUTATED PRKCD WILD-TYPE 
              1             656 
     TCGA-02-0047      TCGA-02-0055      TCGA-02-2483      TCGA-02-2485 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-02-2486      TCGA-06-0129      TCGA-06-0130      TCGA-06-0132 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0157      TCGA-06-0158      TCGA-06-0168 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0174      TCGA-06-0178      TCGA-06-0184      TCGA-06-0219 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0238      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0649      TCGA-06-0686      TCGA-06-0743      TCGA-06-0744 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0745      TCGA-06-0747      TCGA-06-0749      TCGA-06-0750 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0882      TCGA-06-1804      TCGA-06-2557 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-08-0386      TCGA-12-0616 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0821      TCGA-12-1597 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-12-5299      TCGA-14-0781      TCGA-14-0787      TCGA-14-0789 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0817      TCGA-14-1823      TCGA-14-1825 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-15-0742      TCGA-15-1444 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-16-0846      TCGA-16-1045      TCGA-19-1390      TCGA-19-2619 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5132      TCGA-26-5134 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-27-1830 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1834      TCGA-27-1835 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-27-1837      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2528      TCGA-28-1747 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2499      TCGA-28-2509      TCGA-28-2510 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5213      TCGA-28-5215 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5220      TCGA-32-1970 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-2615      TCGA-32-2632 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4213      TCGA-32-5222 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-3915      TCGA-41-4097 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-41-5651      TCGA-76-4925      TCGA-76-4926      TCGA-76-4927 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-4928      TCGA-76-4929      TCGA-76-4931      TCGA-76-4932 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014      TCGA-DU-7015 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A74H      TCGA-HT-A74J      TCGA-HT-A74K      TCGA-HT-A74L 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6U9      TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A7C4      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRKCD MUTATED        0      1      0
  PRKCD WILD-TYPE    196    190    270
D150V10, multiclass
[1] "Remove cluster labels:" "PRKCD MUTATED"         
clus
  PRKCD MUTATED PRKCD WILD-TYPE 
              1             656 
     TCGA-02-0047      TCGA-02-0055      TCGA-02-2483      TCGA-02-2485 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-02-2486      TCGA-06-0129      TCGA-06-0130      TCGA-06-0132 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0141      TCGA-06-0157      TCGA-06-0158      TCGA-06-0168 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0174      TCGA-06-0178      TCGA-06-0184      TCGA-06-0219 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0238      TCGA-06-0644      TCGA-06-0645      TCGA-06-0646 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0649      TCGA-06-0686      TCGA-06-0743      TCGA-06-0744 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0745      TCGA-06-0747      TCGA-06-0749      TCGA-06-0750 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-0878      TCGA-06-0882      TCGA-06-1804      TCGA-06-2557 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-2558      TCGA-06-2559      TCGA-06-2561      TCGA-06-2562 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-2563      TCGA-06-2564      TCGA-06-2565      TCGA-06-2567 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-2569      TCGA-06-2570      TCGA-06-5408      TCGA-06-5410 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5411      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-08-0386      TCGA-12-0616 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0821      TCGA-12-1597 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-12-3650      TCGA-12-3652      TCGA-12-3653      TCGA-12-5295 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-12-5299      TCGA-14-0781      TCGA-14-0787      TCGA-14-0789 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0817      TCGA-14-1823      TCGA-14-1825 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-15-0742      TCGA-15-1444 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-16-0846      TCGA-16-1045      TCGA-19-1390      TCGA-19-2619 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2624      TCGA-19-2625      TCGA-19-2629 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-19-5960      TCGA-26-1442      TCGA-26-5132      TCGA-26-5134 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-26-5135      TCGA-26-5136      TCGA-26-5139      TCGA-27-1830 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-27-1831      TCGA-27-1832      TCGA-27-1834      TCGA-27-1835 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-27-1837      TCGA-27-2519      TCGA-27-2521      TCGA-27-2523 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-27-2524      TCGA-27-2526      TCGA-27-2528      TCGA-28-1747 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2499      TCGA-28-2509      TCGA-28-2510 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5213      TCGA-28-5215 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5220      TCGA-32-1970 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-2615      TCGA-32-2632 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4213      TCGA-32-5222 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-3915      TCGA-41-4097 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-41-5651      TCGA-76-4925      TCGA-76-4926      TCGA-76-4927 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-76-4928      TCGA-76-4929      TCGA-76-4931      TCGA-76-4932 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75M 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DB-A75O      TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-5142      TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-A66B      TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-A7UR      TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DH-A7UV      TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-5852      TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-5870      TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6392      TCGA-DU-6393      TCGA-DU-6394      TCGA-DU-6395 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399      TCGA-DU-6400 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403      TCGA-DU-6404 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407      TCGA-DU-6408 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006      TCGA-DU-7007 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010      TCGA-DU-7011 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014      TCGA-DU-7015 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TD 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A74H      TCGA-HT-A74J      TCGA-HT-A74K      TCGA-HT-A74L 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HT-A74O      TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-7490      TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-8319      TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-HW-A5KJ      TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-IK-7675      TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5ET      TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5EX      TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A5F1      TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A736      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CW      TCGA-QH-A6CX 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6CY      TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6X5      TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-QH-A6XC      TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-R8-A6ML      TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-RY-A83X      TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-RY-A843      TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6TU      TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6TY      TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6U2      TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6U9      TCGA-S9-A6UA      TCGA-S9-A6UB      TCGA-S9-A6WD 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6WE      TCGA-S9-A6WG      TCGA-S9-A6WH      TCGA-S9-A6WI 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6WL      TCGA-S9-A6WM      TCGA-S9-A6WN      TCGA-S9-A6WO 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A6WP      TCGA-S9-A6WQ      TCGA-S9-A7IQ      TCGA-S9-A7IS 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7IX      TCGA-S9-A7IY      TCGA-S9-A7IZ      TCGA-S9-A7J0 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7J1      TCGA-S9-A7J2      TCGA-S9-A7J3      TCGA-S9-A7QW 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7QX      TCGA-S9-A7QY      TCGA-S9-A7QZ      TCGA-S9-A7R1 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7R2      TCGA-S9-A7R3      TCGA-S9-A7R4      TCGA-S9-A7R7 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-S9-A7R8      TCGA-S9-A89V      TCGA-S9-A89Z      TCGA-TM-A7C3 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A7C4      TCGA-TM-A7C5      TCGA-TM-A7CA      TCGA-TM-A7CF 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A84B      TCGA-TM-A84C      TCGA-TM-A84F      TCGA-TM-A84G 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A84H      TCGA-TM-A84I      TCGA-TM-A84J      TCGA-TM-A84L 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A84M      TCGA-TM-A84O      TCGA-TM-A84Q      TCGA-TM-A84R 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TM-A84S      TCGA-TM-A84T      TCGA-TQ-A7RF      TCGA-TQ-A7RG 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RH      TCGA-TQ-A7RI      TCGA-TQ-A7RJ      TCGA-TQ-A7RK 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RM      TCGA-TQ-A7RN      TCGA-TQ-A7RO      TCGA-TQ-A7RP 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RQ      TCGA-TQ-A7RR      TCGA-TQ-A7RS      TCGA-TQ-A7RU 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-TQ-A7RV      TCGA-TQ-A7RW      TCGA-TQ-A8XE      TCGA-VM-A8C8 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-VM-A8C9      TCGA-VM-A8CA      TCGA-VM-A8CB      TCGA-VM-A8CD 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-VM-A8CE      TCGA-VM-A8CF      TCGA-VM-A8CH      TCGA-VV-A829 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-VV-A86M      TCGA-VW-A7QS      TCGA-VW-A8FI      TCGA-W9-A837 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-WH-A86K      TCGA-WY-A858      TCGA-WY-A859      TCGA-WY-A85A 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
     TCGA-WY-A85B      TCGA-WY-A85C      TCGA-WY-A85D      TCGA-WY-A85E 
"PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" "PRKCD WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRKCD MUTATED        0      0      0      0
  PRKCD WILD-TYPE    140    107     83    182
D150V11, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRKCD MUTATED        0      0      0
  PRKCD WILD-TYPE    223    186    103
D150V12, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRKCD MUTATED        0      0      0      0
  PRKCD WILD-TYPE    127    119    106    156
D150V13, multiclass
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  PRKCD MUTATED        0      0      0      0      0      0
  PRKCD WILD-TYPE     99     77    120     57     63     92
D150V14, multiclass

Clustering(151) Variable = ST3GAL6 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ST3GAL6 MUTATED        1      0      1      0
  ST3GAL6 WILD-TYPE     77     41     63     57
D151V1, multiclass
[1] "Remove cluster labels:" "ST3GAL6 MUTATED"       
clus
  ST3GAL6 MUTATED ST3GAL6 WILD-TYPE 
                2               238 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-2557 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2558        TCGA-06-2559        TCGA-06-2561        TCGA-06-2562 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2563        TCGA-06-2564        TCGA-06-2565        TCGA-06-2567 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2569        TCGA-06-2570        TCGA-06-5408        TCGA-06-5410 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5411        TCGA-06-5412        TCGA-06-5413        TCGA-06-5414 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5415        TCGA-06-5417        TCGA-06-5418        TCGA-06-5856 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5858        TCGA-06-5859        TCGA-06-6389        TCGA-06-6390 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-6391        TCGA-08-0386        TCGA-12-0616        TCGA-12-0618 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-0619        TCGA-12-0688        TCGA-12-0692        TCGA-12-0821 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-1597        TCGA-12-3649        TCGA-12-3650        TCGA-12-3652 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-3653        TCGA-12-5295        TCGA-12-5299        TCGA-12-5301 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0871 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5954 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-1831        TCGA-27-1832        TCGA-27-1833        TCGA-27-1834 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-1835        TCGA-27-1836        TCGA-27-1837        TCGA-27-1838 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-2518        TCGA-27-2519        TCGA-27-2521        TCGA-27-2523 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-2524        TCGA-27-2526        TCGA-27-2527        TCGA-27-2528 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-1747        TCGA-28-1753        TCGA-28-2501        TCGA-28-2502 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-2509        TCGA-28-2510        TCGA-28-2513        TCGA-28-2514 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5204        TCGA-28-5207        TCGA-28-5208        TCGA-28-5209 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5213        TCGA-28-5214        TCGA-28-5215        TCGA-28-5216 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5218        TCGA-28-5219        TCGA-28-5220        TCGA-28-6450 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-1970        TCGA-32-1977        TCGA-32-1979        TCGA-32-1980 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-1982        TCGA-32-1986        TCGA-32-1991        TCGA-32-2491 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-2494        TCGA-32-2495        TCGA-32-2615        TCGA-32-2632 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-2634        TCGA-32-2638        TCGA-32-4208        TCGA-32-4209 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-4210        TCGA-32-4211        TCGA-32-4213        TCGA-32-4719 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-5222        TCGA-41-2571        TCGA-41-2572        TCGA-41-2573 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-41-2575        TCGA-41-3392        TCGA-41-3393        TCGA-41-3915 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-41-4097        TCGA-41-5651        TCGA-76-4925        TCGA-76-4926 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-4932        TCGA-76-4934        TCGA-76-4935        TCGA-76-6191 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-6192        TCGA-76-6193        TCGA-76-6282        TCGA-76-6285 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-81-5910        TCGA-87-5896 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ST3GAL6 MUTATED        0      0      1      1
  ST3GAL6 WILD-TYPE     63     50     47     78
D151V2, multiclass
[1] "Remove cluster labels:" "ST3GAL6 MUTATED"       
clus
  ST3GAL6 MUTATED ST3GAL6 WILD-TYPE 
                2               238 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-2470 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-02-2483        TCGA-02-2485        TCGA-02-2486        TCGA-06-0122 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0124        TCGA-06-0126        TCGA-06-0128        TCGA-06-0129 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0130        TCGA-06-0132        TCGA-06-0137        TCGA-06-0139 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0152        TCGA-06-0154        TCGA-06-0155        TCGA-06-0157 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0158        TCGA-06-0166        TCGA-06-0167        TCGA-06-0168 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-2557 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2558        TCGA-06-2559        TCGA-06-2561        TCGA-06-2562 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2563        TCGA-06-2564        TCGA-06-2565        TCGA-06-2567 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2569        TCGA-06-2570        TCGA-06-5408        TCGA-06-5410 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5411        TCGA-06-5412        TCGA-06-5413        TCGA-06-5414 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5415        TCGA-06-5417        TCGA-06-5418        TCGA-06-5856 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5858        TCGA-06-5859        TCGA-06-6389        TCGA-06-6390 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-6391        TCGA-08-0386        TCGA-12-0616        TCGA-12-0618 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-0619        TCGA-12-0688        TCGA-12-0692        TCGA-12-0821 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-1597        TCGA-12-3649        TCGA-12-3650        TCGA-12-3652 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-3653        TCGA-12-5295        TCGA-12-5299        TCGA-12-5301 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-0781        TCGA-14-0786        TCGA-14-0787        TCGA-14-0789 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-0790        TCGA-14-0813        TCGA-14-0817        TCGA-14-0871 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-1456        TCGA-14-1823        TCGA-14-1825        TCGA-14-1829 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-2554        TCGA-14-3476        TCGA-14-4157        TCGA-15-0742 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-15-1444        TCGA-16-0846        TCGA-16-0861        TCGA-16-1045 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-16-1048        TCGA-19-1390        TCGA-19-1790        TCGA-19-2619 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-2620        TCGA-19-2623        TCGA-19-2624        TCGA-19-2625 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-2629        TCGA-19-2631        TCGA-19-4068        TCGA-19-5947 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-5950        TCGA-19-5951        TCGA-19-5952        TCGA-19-5954 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-1831        TCGA-27-1832        TCGA-27-1833        TCGA-27-1834 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-1835        TCGA-27-1836        TCGA-27-1837        TCGA-27-1838 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-2518        TCGA-27-2519        TCGA-27-2521        TCGA-27-2523 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-2524        TCGA-27-2526        TCGA-27-2527        TCGA-27-2528 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-1747        TCGA-28-1753        TCGA-28-2501        TCGA-28-2502 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-2509        TCGA-28-2510        TCGA-28-2513        TCGA-28-2514 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5204        TCGA-28-5207        TCGA-28-5208        TCGA-28-5209 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5213        TCGA-28-5214        TCGA-28-5215        TCGA-28-5216 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5218        TCGA-28-5219        TCGA-28-5220        TCGA-28-6450 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-1970        TCGA-32-1977        TCGA-32-1979        TCGA-32-1980 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-1982        TCGA-32-1986        TCGA-32-1991        TCGA-32-2491 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-2494        TCGA-32-2495        TCGA-32-2615        TCGA-32-2632 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-2634        TCGA-32-2638        TCGA-32-4208        TCGA-32-4209 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-4210        TCGA-32-4211        TCGA-32-4213        TCGA-32-4719 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-5222        TCGA-41-2571        TCGA-41-2572        TCGA-41-2573 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-41-2575        TCGA-41-3392        TCGA-41-3393        TCGA-41-3915 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-41-4097        TCGA-41-5651        TCGA-76-4925        TCGA-76-4926 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-4932        TCGA-76-4934        TCGA-76-4935        TCGA-76-6191 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-6192        TCGA-76-6193        TCGA-76-6282        TCGA-76-6285 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-81-5910        TCGA-87-5896 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ST3GAL6 MUTATED        0      0      1      1
  ST3GAL6 WILD-TYPE     70     98     43     62
D151V3, multiclass
[1] "Remove cluster labels:" "ST3GAL6 MUTATED"       
clus
  ST3GAL6 MUTATED ST3GAL6 WILD-TYPE 
                2               273 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-1806 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-0616        TCGA-12-0618        TCGA-12-0619        TCGA-12-0688 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-0692        TCGA-12-0821        TCGA-12-1597        TCGA-12-3649 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-3650        TCGA-12-3652        TCGA-12-3653        TCGA-12-5295 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-5299        TCGA-12-5301        TCGA-14-0740        TCGA-14-0781 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-0786        TCGA-14-0787        TCGA-14-0789        TCGA-14-0790 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0817        TCGA-14-0862        TCGA-14-0871 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-1043        TCGA-14-1395        TCGA-14-1450        TCGA-14-1456 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-1823        TCGA-14-1825        TCGA-14-1829        TCGA-14-2554 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-3476        TCGA-14-4157        TCGA-15-0742        TCGA-15-1444 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-16-0846        TCGA-16-0861        TCGA-16-1045        TCGA-16-1048 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-1390        TCGA-19-1790        TCGA-19-2619        TCGA-19-2620 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-2623        TCGA-19-2624        TCGA-19-2625        TCGA-19-2629 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-2631        TCGA-19-4068        TCGA-19-5947        TCGA-19-5950 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1831        TCGA-27-1832 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-1833        TCGA-27-1834        TCGA-27-1835        TCGA-27-1836 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-1837        TCGA-27-1838        TCGA-27-2518        TCGA-27-2519 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-2521        TCGA-27-2523        TCGA-27-2524        TCGA-27-2526 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-2527        TCGA-27-2528        TCGA-28-1747        TCGA-28-1753 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5211        TCGA-28-5213        TCGA-28-5214 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5215        TCGA-28-5216        TCGA-28-5218        TCGA-28-5219 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5220        TCGA-28-6450        TCGA-32-1970        TCGA-32-1977 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-1979        TCGA-32-1980        TCGA-32-1982        TCGA-32-1986 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-1991        TCGA-32-2491        TCGA-32-2494        TCGA-32-2495 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-2615        TCGA-32-2632        TCGA-32-2634        TCGA-32-2638 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-4208        TCGA-32-4209        TCGA-32-4210        TCGA-32-4211 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-4213        TCGA-32-4719        TCGA-32-5222        TCGA-41-2571 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-41-2572        TCGA-41-2573        TCGA-41-2575        TCGA-41-3392 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-41-3393        TCGA-41-3915        TCGA-41-4097        TCGA-41-5651 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-41-6646        TCGA-74-6573        TCGA-74-6575        TCGA-74-6577 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-74-6578        TCGA-74-6584        TCGA-76-4925        TCGA-76-4926 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-4932        TCGA-76-4934        TCGA-76-4935        TCGA-76-6191 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-6192        TCGA-76-6193        TCGA-76-6280        TCGA-76-6282 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-6283        TCGA-76-6285        TCGA-76-6286        TCGA-76-6656 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-6657        TCGA-76-6660        TCGA-76-6661        TCGA-76-6662 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-6663        TCGA-76-6664        TCGA-81-5910        TCGA-81-5911 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-87-5896 
"ST3GAL6 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ST3GAL6 MUTATED        1      1      0
  ST3GAL6 WILD-TYPE    137     60     76
D151V4, multiclass
[1] "Remove cluster labels:" "ST3GAL6 MUTATED"       
clus
  ST3GAL6 MUTATED ST3GAL6 WILD-TYPE 
                2               273 
       TCGA-02-0003        TCGA-02-0033        TCGA-02-0047        TCGA-02-0055 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-02-2470        TCGA-02-2483        TCGA-02-2485        TCGA-02-2486 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0122        TCGA-06-0124        TCGA-06-0126        TCGA-06-0128 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0129        TCGA-06-0130        TCGA-06-0137        TCGA-06-0139 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0140        TCGA-06-0141        TCGA-06-0142        TCGA-06-0145 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0151        TCGA-06-0152        TCGA-06-0154        TCGA-06-0155 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0157        TCGA-06-0158        TCGA-06-0166        TCGA-06-0168 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0169        TCGA-06-0173        TCGA-06-0174        TCGA-06-0178 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0184        TCGA-06-0185        TCGA-06-0188        TCGA-06-0189 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0192        TCGA-06-0195        TCGA-06-0213        TCGA-06-0214 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0216        TCGA-06-0219        TCGA-06-0237        TCGA-06-0238 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0240        TCGA-06-0241        TCGA-06-0644        TCGA-06-0645 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0646        TCGA-06-0648        TCGA-06-0649        TCGA-06-0650 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0686        TCGA-06-0743        TCGA-06-0744        TCGA-06-0745 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0749        TCGA-06-0750        TCGA-06-0875        TCGA-06-0876 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0877        TCGA-06-0878        TCGA-06-0879        TCGA-06-0881 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-0882        TCGA-06-0939        TCGA-06-1804        TCGA-06-1806 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2557        TCGA-06-2558        TCGA-06-2559        TCGA-06-2561 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2562        TCGA-06-2563        TCGA-06-2564        TCGA-06-2565 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-2567        TCGA-06-2569        TCGA-06-2570        TCGA-06-5408 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5410        TCGA-06-5411        TCGA-06-5412        TCGA-06-5413 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5414        TCGA-06-5415        TCGA-06-5417        TCGA-06-5418 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-5856        TCGA-06-5858        TCGA-06-5859        TCGA-06-6388 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-6389        TCGA-06-6390        TCGA-06-6391        TCGA-06-6693 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-6694        TCGA-06-6695        TCGA-06-6697        TCGA-06-6698 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-06-6699        TCGA-06-6700        TCGA-06-6701        TCGA-08-0386 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-0616        TCGA-12-0618        TCGA-12-0619        TCGA-12-0688 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-0692        TCGA-12-0821        TCGA-12-1597        TCGA-12-3649 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-3650        TCGA-12-3652        TCGA-12-3653        TCGA-12-5295 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-12-5299        TCGA-12-5301        TCGA-14-0740        TCGA-14-0781 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-0786        TCGA-14-0787        TCGA-14-0789        TCGA-14-0790 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-0813        TCGA-14-0817        TCGA-14-0862        TCGA-14-0871 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-1043        TCGA-14-1395        TCGA-14-1450        TCGA-14-1456 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-1823        TCGA-14-1825        TCGA-14-1829        TCGA-14-2554 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-14-3476        TCGA-14-4157        TCGA-15-0742        TCGA-15-1444 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-16-0846        TCGA-16-0861        TCGA-16-1045        TCGA-16-1048 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-1390        TCGA-19-1790        TCGA-19-2619        TCGA-19-2620 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-2623        TCGA-19-2624        TCGA-19-2625        TCGA-19-2629 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-2631        TCGA-19-4068        TCGA-19-5947        TCGA-19-5950 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-5951        TCGA-19-5952        TCGA-19-5953        TCGA-19-5954 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-19-5955        TCGA-19-5958        TCGA-19-5959        TCGA-19-5960 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-26-1439        TCGA-26-1442        TCGA-26-5132        TCGA-26-5133 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-26-5134        TCGA-26-5135        TCGA-26-5136        TCGA-26-5139 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-26-6173        TCGA-26-6174        TCGA-27-1831        TCGA-27-1832 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-1833        TCGA-27-1834        TCGA-27-1835        TCGA-27-1836 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-1837        TCGA-27-1838        TCGA-27-2518        TCGA-27-2519 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-2521        TCGA-27-2523        TCGA-27-2524        TCGA-27-2526 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-27-2527        TCGA-27-2528        TCGA-28-1747        TCGA-28-1753 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-2502        TCGA-28-2509        TCGA-28-2510        TCGA-28-2513 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-2514        TCGA-28-5204        TCGA-28-5207        TCGA-28-5208 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5209        TCGA-28-5211        TCGA-28-5213        TCGA-28-5214 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5215        TCGA-28-5216        TCGA-28-5218        TCGA-28-5219 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-28-5220        TCGA-28-6450        TCGA-32-1970        TCGA-32-1977 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-1979        TCGA-32-1980        TCGA-32-1982        TCGA-32-1986 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-1991        TCGA-32-2491        TCGA-32-2494        TCGA-32-2495 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-2615        TCGA-32-2632        TCGA-32-2634        TCGA-32-2638 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-4208        TCGA-32-4209        TCGA-32-4210        TCGA-32-4211 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-32-4213        TCGA-32-4719        TCGA-32-5222        TCGA-41-2571 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-41-2572        TCGA-41-2573        TCGA-41-2575        TCGA-41-3392 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-41-3393        TCGA-41-3915        TCGA-41-4097        TCGA-41-5651 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-41-6646        TCGA-74-6573        TCGA-74-6575        TCGA-74-6577 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-74-6578        TCGA-74-6584        TCGA-76-4925        TCGA-76-4926 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-4927        TCGA-76-4928        TCGA-76-4929        TCGA-76-4931 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-4932        TCGA-76-4934        TCGA-76-4935        TCGA-76-6191 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-6192        TCGA-76-6193        TCGA-76-6280        TCGA-76-6282 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-6283        TCGA-76-6285        TCGA-76-6286        TCGA-76-6656 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-6657        TCGA-76-6660        TCGA-76-6661        TCGA-76-6662 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-76-6663        TCGA-76-6664        TCGA-81-5910        TCGA-81-5911 
"ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" "ST3GAL6 WILD-TYPE" 
       TCGA-87-5896 
"ST3GAL6 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ST3GAL6 MUTATED        4      1      0
  ST3GAL6 WILD-TYPE    288    431     62
D151V5, multiclass
        clus
vv       ST3GAL6 MUTATED ST3GAL6 WILD-TYPE
  CLUS_1               4               288
  CLUS_2               1               431
  CLUS_3               0                62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ST3GAL6 MUTATED        2      0      0      1
  ST3GAL6 WILD-TYPE    151    223     88    160
D151V6, multiclass
        clus
vv       ST3GAL6 MUTATED ST3GAL6 WILD-TYPE
  CLUS_1               2               151
  CLUS_2               0               223
  CLUS_3               0                88
  CLUS_4               1               160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ST3GAL6 MUTATED        2      0      1      1
  ST3GAL6 WILD-TYPE    183    155    137     94
D151V7, multiclass
        clus
vv       ST3GAL6 MUTATED ST3GAL6 WILD-TYPE
  CLUS_1               2               183
  CLUS_2               0               155
  CLUS_3               1               137
  CLUS_4               1                94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ST3GAL6 MUTATED        4      0      0
  ST3GAL6 WILD-TYPE    201    220    148
D151V8, multiclass
        clus
vv       ST3GAL6 MUTATED ST3GAL6 WILD-TYPE
  CLUS_1               4               201
  CLUS_2               0               220
  CLUS_3               0               148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ST3GAL6 MUTATED        4      1      0
  ST3GAL6 WILD-TYPE    234    190    228
D151V9, multiclass
        clus
vv       ST3GAL6 MUTATED ST3GAL6 WILD-TYPE
  CLUS_1               4               234
  CLUS_2               1               190
  CLUS_3               0               228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ST3GAL6 MUTATED        3      1      1
  ST3GAL6 WILD-TYPE    193    190    269
D151V10, multiclass
        clus
vv       ST3GAL6 MUTATED ST3GAL6 WILD-TYPE
  CLUS_1               3               193
  CLUS_2               1               190
  CLUS_3               1               269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ST3GAL6 MUTATED        1      1      0      1
  ST3GAL6 WILD-TYPE    139    106     83    181
D151V11, multiclass
        clus
vv       ST3GAL6 MUTATED ST3GAL6 WILD-TYPE
  CLUS_1               1               139
  CLUS_2               1               106
  CLUS_3               0                83
  CLUS_4               1               181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ST3GAL6 MUTATED        0      1      2
  ST3GAL6 WILD-TYPE    223    185    101
D151V12, multiclass
        clus
vv       ST3GAL6 MUTATED ST3GAL6 WILD-TYPE
  CLUS_1               0               223
  CLUS_2               1               185
  CLUS_3               2               101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ST3GAL6 MUTATED        1      0      0      2
  ST3GAL6 WILD-TYPE    126    119    106    154
D151V13, multiclass
        clus
vv       ST3GAL6 MUTATED ST3GAL6 WILD-TYPE
  CLUS_1               1               126
  CLUS_2               0               119
  CLUS_3               0               106
  CLUS_4               2               154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  ST3GAL6 MUTATED        0      0      0      0      1      2
  ST3GAL6 WILD-TYPE     99     77    120     57     62     90
D151V14, multiclass
        clus
vv       ST3GAL6 MUTATED ST3GAL6 WILD-TYPE
  CLUS_1               0                99
  CLUS_2               0                77
  CLUS_3               0               120
  CLUS_4               0                57
  CLUS_5               1                62
  CLUS_6               2                90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(152) Variable = SOX13 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX13 MUTATED        0      0      1      1
  SOX13 WILD-TYPE     78     41     63     56
D152V1, multiclass
[1] "Remove cluster labels:" "SOX13 MUTATED"         
clus
  SOX13 MUTATED SOX13 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-2491 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX13 MUTATED        0      0      1      1
  SOX13 WILD-TYPE     63     50     47     78
D152V2, multiclass
[1] "Remove cluster labels:" "SOX13 MUTATED"         
clus
  SOX13 MUTATED SOX13 WILD-TYPE 
              2             238 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5412      TCGA-06-5413      TCGA-06-5414 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-5415      TCGA-06-5417      TCGA-06-5418      TCGA-06-5856 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-5858      TCGA-06-5859      TCGA-06-6389      TCGA-06-6390 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-06-6391      TCGA-08-0386      TCGA-12-0616      TCGA-12-0618 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-12-0619      TCGA-12-0688      TCGA-12-0692      TCGA-12-0821 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-12-1597      TCGA-12-3649      TCGA-12-3650      TCGA-12-3652 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-12-3653      TCGA-12-5295      TCGA-12-5299      TCGA-12-5301 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0871 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5954 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-19-5955      TCGA-19-5958      TCGA-19-5959      TCGA-19-5960 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-2491 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-32-2494      TCGA-32-2495      TCGA-32-2615      TCGA-32-2632 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-32-2634      TCGA-32-2638      TCGA-32-4208      TCGA-32-4209 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-32-4210      TCGA-32-4211      TCGA-32-4213      TCGA-32-4719 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-32-5222      TCGA-41-2571      TCGA-41-2572      TCGA-41-2573 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-41-2575      TCGA-41-3392      TCGA-41-3393      TCGA-41-3915 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-41-4097      TCGA-41-5651      TCGA-76-4925      TCGA-76-4926 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-76-4927      TCGA-76-4928      TCGA-76-4929      TCGA-76-4931 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-76-4932      TCGA-76-4934      TCGA-76-4935      TCGA-76-6191 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-76-6192      TCGA-76-6193      TCGA-76-6282      TCGA-76-6285 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-81-5910      TCGA-87-5896 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX13 MUTATED        1      1      1      0
  SOX13 WILD-TYPE     69     97     43     63
D152V3, multiclass
        clus
vv       SOX13 MUTATED SOX13 WILD-TYPE
  CLUS_1             1              69
  CLUS_2             1              97
  CLUS_3             1              43
  CLUS_4             0              63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SOX13 MUTATED        2      0      1
  SOX13 WILD-TYPE    136     61     75
D152V4, multiclass
        clus
vv       SOX13 MUTATED SOX13 WILD-TYPE
  CLUS_1             2             136
  CLUS_2             0              61
  CLUS_3             1              75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SOX13 MUTATED        5      0      0
  SOX13 WILD-TYPE    287    432     62
D152V5, multiclass
        clus
vv       SOX13 MUTATED SOX13 WILD-TYPE
  CLUS_1             5             287
  CLUS_2             0             432
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX13 MUTATED        4      0      0      0
  SOX13 WILD-TYPE    149    223     88    161
D152V6, multiclass
        clus
vv       SOX13 MUTATED SOX13 WILD-TYPE
  CLUS_1             4             149
  CLUS_2             0             223
  CLUS_3             0              88
  CLUS_4             0             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX13 MUTATED        1      1      3      0
  SOX13 WILD-TYPE    184    154    135     95
D152V7, multiclass
        clus
vv       SOX13 MUTATED SOX13 WILD-TYPE
  CLUS_1             1             184
  CLUS_2             1             154
  CLUS_3             3             135
  CLUS_4             0              95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SOX13 MUTATED        2      2      1
  SOX13 WILD-TYPE    203    218    147
D152V8, multiclass
        clus
vv       SOX13 MUTATED SOX13 WILD-TYPE
  CLUS_1             2             203
  CLUS_2             2             218
  CLUS_3             1             147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SOX13 MUTATED        2      1      0
  SOX13 WILD-TYPE    236    190    228
D152V9, multiclass
        clus
vv       SOX13 MUTATED SOX13 WILD-TYPE
  CLUS_1             2             236
  CLUS_2             1             190
  CLUS_3             0             228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SOX13 MUTATED        1      1      1
  SOX13 WILD-TYPE    195    190    269
D152V10, multiclass
        clus
vv       SOX13 MUTATED SOX13 WILD-TYPE
  CLUS_1             1             195
  CLUS_2             1             190
  CLUS_3             1             269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX13 MUTATED        0      2      0      0
  SOX13 WILD-TYPE    140    105     83    182
D152V11, multiclass
[1] "Remove cluster labels:" "SOX13 MUTATED"         
clus
  SOX13 MUTATED SOX13 WILD-TYPE 
              2             510 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6      TCGA-P5-A72U 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A736 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY      TCGA-QH-A6CZ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X      TCGA-RY-A83Y 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843      TCGA-RY-A845 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU      TCGA-S9-A6TV 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6TZ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2      TCGA-S9-A6U5 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9      TCGA-S9-A6UA 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4      TCGA-TM-A7C5 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B      TCGA-TM-A84C 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H      TCGA-TM-A84I 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M      TCGA-TM-A84O 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TM-A84T 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH      TCGA-TQ-A7RI 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM      TCGA-TQ-A7RN 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ      TCGA-TQ-A7RR 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CF 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K      TCGA-WY-A858 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B      TCGA-WY-A85C 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-WY-A85D      TCGA-WY-A85E 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SOX13 MUTATED        0      0      2
  SOX13 WILD-TYPE    223    186    101
D152V12, multiclass
[1] "Remove cluster labels:" "SOX13 MUTATED"         
clus
  SOX13 MUTATED SOX13 WILD-TYPE 
              2             510 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5280      TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A4XB      TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A4XF      TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A64O      TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A64S      TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A64X      TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A75P      TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-5143      TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-A66D      TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-A7US      TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5847      TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5853      TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5871      TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6394      TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6399      TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6403      TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6407      TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7006      TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7010      TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7015      TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7292      TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7300      TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7306      TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-8162      TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-8166      TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A5TR      TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A5TW      TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A6S6      TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A76L      TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A7T8      TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A7TG      TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-5303      TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-5311      TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YD      TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YJ      TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YN      TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YU      TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7Z2      TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-EZ-7264      TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-5963      TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-6689      TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-7634      TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-7641      TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-8185      TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-8189      TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A4MW      TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A60K      TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A6J3      TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A711      TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FN-7833      TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7470      TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7474      TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7478      TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7482      TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7602      TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7606      TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7610      TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7676      TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7684      TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7689      TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7693      TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7855      TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7860      TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7877      TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7882      TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8011      TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8018      TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8106      TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8110      TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8558      TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A4DV      TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A5RA      TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A615      TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A619      TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A74H      TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-7486      TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-7491      TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-8320      TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-A5KK      TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-IK-8125      TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5EU      TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5EY      TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5F2      TCGA-P5-A5F4      TCGA-P5-A5F6      TCGA-P5-A72U 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A72W      TCGA-P5-A72X      TCGA-P5-A72Z      TCGA-P5-A730 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A731      TCGA-P5-A733      TCGA-P5-A735      TCGA-P5-A736 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X      TCGA-P5-A780 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S      TCGA-QH-A65V 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS      TCGA-QH-A6CU 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY      TCGA-QH-A6CZ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5      TCGA-QH-A6X8 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC      TCGA-QH-A86X 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML      TCGA-R8-A6MO 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X      TCGA-RY-A83Y 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843      TCGA-RY-A845 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU      TCGA-S9-A6TV 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY      TCGA-S9-A6TZ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2      TCGA-S9-A6U5 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6U9      TCGA-S9-A6UA 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4      TCGA-TM-A7C5 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B      TCGA-TM-A84C 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H      TCGA-TM-A84I 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M      TCGA-TM-A84O 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TM-A84T 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH      TCGA-TQ-A7RI 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM      TCGA-TQ-A7RN 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ      TCGA-TQ-A7RR 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CF 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K      TCGA-WY-A858 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B      TCGA-WY-A85C 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-WY-A85D      TCGA-WY-A85E 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX13 MUTATED        0      1      0      1
  SOX13 WILD-TYPE    127    118    106    155
D152V13, multiclass
[1] "Remove cluster labels:" "SOX13 MUTATED"         
clus
  SOX13 MUTATED SOX13 WILD-TYPE 
              2             506 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393      TCGA-DU-6394 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014      TCGA-DU-7015 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TG 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6UA 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4      TCGA-TM-A7C5 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B      TCGA-TM-A84C 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H      TCGA-TM-A84I 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M      TCGA-TM-A84O 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TM-A84T 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH      TCGA-TQ-A7RI 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM      TCGA-TQ-A7RN 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ      TCGA-TQ-A7RR 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CF 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K      TCGA-WY-A858 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B      TCGA-WY-A85C 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-WY-A85D      TCGA-WY-A85E 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  SOX13 MUTATED        0      0      0      0      1      1
  SOX13 WILD-TYPE     99     77    120     57     62     91
D152V14, multiclass
[1] "Remove cluster labels:" "SOX13 MUTATED"         
clus
  SOX13 MUTATED SOX13 WILD-TYPE 
              2             506 
     TCGA-CS-4938      TCGA-CS-4941      TCGA-CS-4942      TCGA-CS-4943 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-4944      TCGA-CS-5390      TCGA-CS-5393      TCGA-CS-5394 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-5395      TCGA-CS-5396      TCGA-CS-5397      TCGA-CS-6186 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-6188      TCGA-CS-6290      TCGA-CS-6665      TCGA-CS-6666 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-CS-6667      TCGA-CS-6668      TCGA-CS-6669      TCGA-CS-6670 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5270      TCGA-DB-5273      TCGA-DB-5274      TCGA-DB-5275 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5276      TCGA-DB-5277      TCGA-DB-5278      TCGA-DB-5279 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-5281      TCGA-DB-A4X9      TCGA-DB-A4XA      TCGA-DB-A4XB 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A4XC      TCGA-DB-A4XD      TCGA-DB-A4XE      TCGA-DB-A4XF 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A4XG      TCGA-DB-A4XH      TCGA-DB-A64L      TCGA-DB-A64O 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A64P      TCGA-DB-A64Q      TCGA-DB-A64R      TCGA-DB-A64S 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A64U      TCGA-DB-A64V      TCGA-DB-A64W      TCGA-DB-A64X 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DB-A75K      TCGA-DB-A75L      TCGA-DB-A75O      TCGA-DB-A75P 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-5140      TCGA-DH-5141      TCGA-DH-5142      TCGA-DH-5143 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-5144      TCGA-DH-A669      TCGA-DH-A66B      TCGA-DH-A66D 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-A66F      TCGA-DH-A66G      TCGA-DH-A7UR      TCGA-DH-A7US 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DH-A7UT      TCGA-DH-A7UU      TCGA-DH-A7UV      TCGA-DU-5847 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5849      TCGA-DU-5851      TCGA-DU-5852      TCGA-DU-5853 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5854      TCGA-DU-5855      TCGA-DU-5870      TCGA-DU-5871 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-5872      TCGA-DU-5874      TCGA-DU-6393      TCGA-DU-6394 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6395      TCGA-DU-6396      TCGA-DU-6397      TCGA-DU-6399 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6400      TCGA-DU-6401      TCGA-DU-6402      TCGA-DU-6403 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6404      TCGA-DU-6405      TCGA-DU-6406      TCGA-DU-6407 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-6408      TCGA-DU-6410      TCGA-DU-6542      TCGA-DU-7006 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7007      TCGA-DU-7008      TCGA-DU-7009      TCGA-DU-7010 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7012      TCGA-DU-7013      TCGA-DU-7014      TCGA-DU-7015 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7018      TCGA-DU-7019      TCGA-DU-7290      TCGA-DU-7292 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7294      TCGA-DU-7298      TCGA-DU-7299      TCGA-DU-7300 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7301      TCGA-DU-7302      TCGA-DU-7304      TCGA-DU-7306 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-7309      TCGA-DU-8158      TCGA-DU-8161      TCGA-DU-8162 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-8163      TCGA-DU-8164      TCGA-DU-8165      TCGA-DU-8166 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-8167      TCGA-DU-8168      TCGA-DU-A5TP      TCGA-DU-A5TR 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A5TS      TCGA-DU-A5TT      TCGA-DU-A5TU      TCGA-DU-A5TW 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A5TY      TCGA-DU-A6S2      TCGA-DU-A6S3      TCGA-DU-A6S6 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A6S7      TCGA-DU-A6S8      TCGA-DU-A76K      TCGA-DU-A76L 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A76O      TCGA-DU-A76R      TCGA-DU-A7T6      TCGA-DU-A7T8 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A7TA      TCGA-DU-A7TB      TCGA-DU-A7TC      TCGA-DU-A7TG 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-DU-A7TI      TCGA-DU-A7TJ      TCGA-E1-5302      TCGA-E1-5303 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-5304      TCGA-E1-5305      TCGA-E1-5307      TCGA-E1-5311 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-5318      TCGA-E1-5319      TCGA-E1-5322      TCGA-E1-A7YD 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YE      TCGA-E1-A7YH      TCGA-E1-A7YI      TCGA-E1-A7YJ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YK      TCGA-E1-A7YL      TCGA-E1-A7YM      TCGA-E1-A7YN 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YO      TCGA-E1-A7YQ      TCGA-E1-A7YS      TCGA-E1-A7YU 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7YV      TCGA-E1-A7YW      TCGA-E1-A7YY      TCGA-E1-A7Z2 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-E1-A7Z3      TCGA-E1-A7Z4      TCGA-E1-A7Z6      TCGA-EZ-7264 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-F6-A8O3      TCGA-F6-A8O4      TCGA-FG-5962      TCGA-FG-5963 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-5964      TCGA-FG-5965      TCGA-FG-6688      TCGA-FG-6689 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-6690      TCGA-FG-6691      TCGA-FG-6692      TCGA-FG-7634 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-7636      TCGA-FG-7637      TCGA-FG-7638      TCGA-FG-7641 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-7643      TCGA-FG-8181      TCGA-FG-8182      TCGA-FG-8185 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-8186      TCGA-FG-8187      TCGA-FG-8188      TCGA-FG-8189 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-8191      TCGA-FG-A4MT      TCGA-FG-A4MU      TCGA-FG-A4MW 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A4MX      TCGA-FG-A4MY      TCGA-FG-A60J      TCGA-FG-A60K 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A60L      TCGA-FG-A6IZ      TCGA-FG-A6J1      TCGA-FG-A6J3 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A70Y      TCGA-FG-A70Z      TCGA-FG-A710      TCGA-FG-A711 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-FG-A713      TCGA-FG-A87N      TCGA-FG-A87Q      TCGA-FN-7833 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7467      TCGA-HT-7468      TCGA-HT-7469      TCGA-HT-7470 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7471      TCGA-HT-7472      TCGA-HT-7473      TCGA-HT-7474 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7475      TCGA-HT-7476      TCGA-HT-7477      TCGA-HT-7478 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7479      TCGA-HT-7480      TCGA-HT-7481      TCGA-HT-7482 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7483      TCGA-HT-7485      TCGA-HT-7601      TCGA-HT-7602 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7603      TCGA-HT-7604      TCGA-HT-7605      TCGA-HT-7606 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7607      TCGA-HT-7608      TCGA-HT-7609      TCGA-HT-7610 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7611      TCGA-HT-7616      TCGA-HT-7620      TCGA-HT-7676 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7677      TCGA-HT-7680      TCGA-HT-7681      TCGA-HT-7684 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7686      TCGA-HT-7687      TCGA-HT-7688      TCGA-HT-7689 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7690      TCGA-HT-7691      TCGA-HT-7692      TCGA-HT-7693 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7694      TCGA-HT-7695      TCGA-HT-7854      TCGA-HT-7855 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7856      TCGA-HT-7857      TCGA-HT-7858      TCGA-HT-7860 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7873      TCGA-HT-7874      TCGA-HT-7875      TCGA-HT-7877 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7879      TCGA-HT-7880      TCGA-HT-7881      TCGA-HT-7882 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-7884      TCGA-HT-7902      TCGA-HT-8010      TCGA-HT-8011 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8012      TCGA-HT-8013      TCGA-HT-8015      TCGA-HT-8018 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8019      TCGA-HT-8104      TCGA-HT-8105      TCGA-HT-8106 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8107      TCGA-HT-8108      TCGA-HT-8109      TCGA-HT-8110 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8111      TCGA-HT-8113      TCGA-HT-8114      TCGA-HT-8558 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-8563      TCGA-HT-8564      TCGA-HT-A4DS      TCGA-HT-A4DV 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A5R5      TCGA-HT-A5R7      TCGA-HT-A5R9      TCGA-HT-A5RA 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A5RB      TCGA-HT-A5RC      TCGA-HT-A614      TCGA-HT-A615 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A616      TCGA-HT-A617      TCGA-HT-A618      TCGA-HT-A619 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A61A      TCGA-HT-A61B      TCGA-HT-A61C      TCGA-HT-A74H 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HT-A74K      TCGA-HT-A74L      TCGA-HT-A74O      TCGA-HW-7486 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-7487      TCGA-HW-7489      TCGA-HW-7490      TCGA-HW-7491 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-7493      TCGA-HW-7495      TCGA-HW-8319      TCGA-HW-8320 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-8321      TCGA-HW-8322      TCGA-HW-A5KJ      TCGA-HW-A5KK 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-HW-A5KL      TCGA-HW-A5KM      TCGA-IK-7675      TCGA-IK-8125 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-KT-A74X      TCGA-KT-A7W1      TCGA-P5-A5ET      TCGA-P5-A5EU 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5EV      TCGA-P5-A5EW      TCGA-P5-A5EX      TCGA-P5-A5EY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5EZ      TCGA-P5-A5F0      TCGA-P5-A5F1      TCGA-P5-A5F2 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A5F4      TCGA-P5-A72U      TCGA-P5-A72W      TCGA-P5-A72X 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A72Z      TCGA-P5-A730      TCGA-P5-A731      TCGA-P5-A733 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A735      TCGA-P5-A737      TCGA-P5-A77W      TCGA-P5-A77X 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-P5-A780      TCGA-P5-A781      TCGA-QH-A65R      TCGA-QH-A65S 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A65V      TCGA-QH-A65X      TCGA-QH-A65Z      TCGA-QH-A6CS 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6CU      TCGA-QH-A6CV      TCGA-QH-A6CX      TCGA-QH-A6CY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6CZ      TCGA-QH-A6X3      TCGA-QH-A6X4      TCGA-QH-A6X5 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A6X8      TCGA-QH-A6X9      TCGA-QH-A6XA      TCGA-QH-A6XC 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-QH-A86X      TCGA-QH-A870      TCGA-R8-A6MK      TCGA-R8-A6ML 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-R8-A6MO      TCGA-R8-A6YH      TCGA-R8-A73M      TCGA-RY-A83X 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-RY-A83Y      TCGA-RY-A83Z      TCGA-RY-A840      TCGA-RY-A843 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-RY-A845      TCGA-RY-A847      TCGA-S9-A6TS      TCGA-S9-A6TU 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6TV      TCGA-S9-A6TW      TCGA-S9-A6TX      TCGA-S9-A6TY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6TZ      TCGA-S9-A6U0      TCGA-S9-A6U1      TCGA-S9-A6U2 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6U5      TCGA-S9-A6U6      TCGA-S9-A6U8      TCGA-S9-A6UA 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6UB      TCGA-S9-A6WD      TCGA-S9-A6WE      TCGA-S9-A6WG 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6WH      TCGA-S9-A6WI      TCGA-S9-A6WL      TCGA-S9-A6WM 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A6WN      TCGA-S9-A6WO      TCGA-S9-A6WP      TCGA-S9-A6WQ 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7IQ      TCGA-S9-A7IS      TCGA-S9-A7IX      TCGA-S9-A7IY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7IZ      TCGA-S9-A7J0      TCGA-S9-A7J1      TCGA-S9-A7J2 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7J3      TCGA-S9-A7QW      TCGA-S9-A7QX      TCGA-S9-A7QY 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7QZ      TCGA-S9-A7R1      TCGA-S9-A7R2      TCGA-S9-A7R3 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A7R4      TCGA-S9-A7R7      TCGA-S9-A7R8      TCGA-S9-A89V 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-S9-A89Z      TCGA-TM-A7C3      TCGA-TM-A7C4      TCGA-TM-A7C5 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A7CA      TCGA-TM-A7CF      TCGA-TM-A84B      TCGA-TM-A84C 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84F      TCGA-TM-A84G      TCGA-TM-A84H      TCGA-TM-A84I 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84J      TCGA-TM-A84L      TCGA-TM-A84M      TCGA-TM-A84O 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TM-A84Q      TCGA-TM-A84R      TCGA-TM-A84S      TCGA-TM-A84T 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RF      TCGA-TQ-A7RG      TCGA-TQ-A7RH      TCGA-TQ-A7RI 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RJ      TCGA-TQ-A7RK      TCGA-TQ-A7RM      TCGA-TQ-A7RN 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RO      TCGA-TQ-A7RP      TCGA-TQ-A7RQ      TCGA-TQ-A7RR 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A7RS      TCGA-TQ-A7RU      TCGA-TQ-A7RV      TCGA-TQ-A7RW 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-TQ-A8XE      TCGA-VM-A8C8      TCGA-VM-A8C9      TCGA-VM-A8CA 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VM-A8CB      TCGA-VM-A8CD      TCGA-VM-A8CE      TCGA-VM-A8CF 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VM-A8CH      TCGA-VV-A829      TCGA-VV-A86M      TCGA-VW-A7QS 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-VW-A8FI      TCGA-W9-A837      TCGA-WH-A86K      TCGA-WY-A858 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-WY-A859      TCGA-WY-A85A      TCGA-WY-A85B      TCGA-WY-A85C 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 
     TCGA-WY-A85D      TCGA-WY-A85E 
"SOX13 WILD-TYPE" "SOX13 WILD-TYPE" 

Clustering(153) Variable = NKX2-2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKX2-2 MUTATED        0      0      0      0
  NKX2-2 WILD-TYPE     78     41     64     57
D153V1, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKX2-2 MUTATED        0      0      0      0
  NKX2-2 WILD-TYPE     63     50     48     79
D153V2, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKX2-2 MUTATED        0      0      0      0
  NKX2-2 WILD-TYPE     70     98     44     63
D153V3, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NKX2-2 MUTATED        0      0      0
  NKX2-2 WILD-TYPE    138     61     76
D153V4, multiclass
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NKX2-2 MUTATED        1      5      0
  NKX2-2 WILD-TYPE    291    427     62
D153V5, multiclass
        clus
vv       NKX2-2 MUTATED NKX2-2 WILD-TYPE
  CLUS_1              1              291
  CLUS_2              5              427
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKX2-2 MUTATED        1      3      1      1
  NKX2-2 WILD-TYPE    152    220     87    160
D153V6, multiclass
        clus
vv       NKX2-2 MUTATED NKX2-2 WILD-TYPE
  CLUS_1              1              152
  CLUS_2              3              220
  CLUS_3              1               87
  CLUS_4              1              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKX2-2 MUTATED        3      2      0      1
  NKX2-2 WILD-TYPE    182    153    138     94
D153V7, multiclass
        clus
vv       NKX2-2 MUTATED NKX2-2 WILD-TYPE
  CLUS_1              3              182
  CLUS_2              2              153
  CLUS_3              0              138
  CLUS_4              1               94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NKX2-2 MUTATED        2      3      1
  NKX2-2 WILD-TYPE    203    217    147
D153V8, multiclass
        clus
vv       NKX2-2 MUTATED NKX2-2 WILD-TYPE
  CLUS_1              2              203
  CLUS_2              3              217
  CLUS_3              1              147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NKX2-2 MUTATED        1      1      4
  NKX2-2 WILD-TYPE    237    190    224
D153V9, multiclass
        clus
vv       NKX2-2 MUTATED NKX2-2 WILD-TYPE
  CLUS_1              1              237
  CLUS_2              1              190
  CLUS_3              4              224
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NKX2-2 MUTATED        0      5      1
  NKX2-2 WILD-TYPE    196    186    269
D153V10, multiclass
        clus
vv       NKX2-2 MUTATED NKX2-2 WILD-TYPE
  CLUS_1              0              196
  CLUS_2              5              186
  CLUS_3              1              269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKX2-2 MUTATED        2      2      0      2
  NKX2-2 WILD-TYPE    138    105     83    180
D153V11, multiclass
        clus
vv       NKX2-2 MUTATED NKX2-2 WILD-TYPE
  CLUS_1              2              138
  CLUS_2              2              105
  CLUS_3              0               83
  CLUS_4              2              180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NKX2-2 MUTATED        3      2      1
  NKX2-2 WILD-TYPE    220    184    102
D153V12, multiclass
        clus
vv       NKX2-2 MUTATED NKX2-2 WILD-TYPE
  CLUS_1              3              220
  CLUS_2              2              184
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKX2-2 MUTATED        1      1      1      3
  NKX2-2 WILD-TYPE    126    118    105    153
D153V13, multiclass
        clus
vv       NKX2-2 MUTATED NKX2-2 WILD-TYPE
  CLUS_1              1              126
  CLUS_2              1              118
  CLUS_3              1              105
  CLUS_4              3              153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  NKX2-2 MUTATED        1      2      1      0      0      2
  NKX2-2 WILD-TYPE     98     75    119     57     63     90
D153V14, multiclass
        clus
vv       NKX2-2 MUTATED NKX2-2 WILD-TYPE
  CLUS_1              1               98
  CLUS_2              2               75
  CLUS_3              1              119
  CLUS_4              0               57
  CLUS_5              0               63
  CLUS_6              2               90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(154) Variable = SYBU MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SYBU MUTATED        0      0      0      2
  SYBU WILD-TYPE     78     41     64     55
D154V1, multiclass
[1] "Remove cluster labels:" "SYBU MUTATED"          
clus
  SYBU MUTATED SYBU WILD-TYPE 
             2            238 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-2557 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6390     TCGA-06-6391 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0781 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0871     TCGA-14-1456 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5954     TCGA-19-5955 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-19-5958     TCGA-19-5959     TCGA-19-5960     TCGA-26-1439 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-27-1830 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1836     TCGA-27-1837     TCGA-27-1838 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-27-2518     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2527     TCGA-27-2528 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2501     TCGA-28-2502 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-2509     TCGA-28-2510     TCGA-28-2513     TCGA-28-2514 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-5204     TCGA-28-5207     TCGA-28-5208     TCGA-28-5209 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-4719 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-2573 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-41-2575     TCGA-41-3392     TCGA-41-3393     TCGA-41-3915 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-76-4925     TCGA-76-4926 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6282     TCGA-76-6285 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-81-5910     TCGA-87-5896 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SYBU MUTATED        0      1      0      1
  SYBU WILD-TYPE     63     49     48     78
D154V2, multiclass
[1] "Remove cluster labels:" "SYBU MUTATED"          
clus
  SYBU MUTATED SYBU WILD-TYPE 
             2            238 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-2557 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-2558     TCGA-06-2559     TCGA-06-2561     TCGA-06-2562 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-2563     TCGA-06-2564     TCGA-06-2565     TCGA-06-2567 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-2569     TCGA-06-2570     TCGA-06-5408     TCGA-06-5410 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-5411     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6390     TCGA-06-6391 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-08-0386     TCGA-12-0616     TCGA-12-0618     TCGA-12-0619 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-12-0688     TCGA-12-0692     TCGA-12-0821     TCGA-12-1597 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-12-3649     TCGA-12-3650     TCGA-12-3652     TCGA-12-3653 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0781 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0871     TCGA-14-1456 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5954     TCGA-19-5955 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-19-5958     TCGA-19-5959     TCGA-19-5960     TCGA-26-1439 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-27-1830 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1833     TCGA-27-1834 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-27-1835     TCGA-27-1836     TCGA-27-1837     TCGA-27-1838 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-27-2518     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2527     TCGA-27-2528 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-1747     TCGA-28-1753     TCGA-28-2501     TCGA-28-2502 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-2509     TCGA-28-2510     TCGA-28-2513     TCGA-28-2514 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-5204     TCGA-28-5207     TCGA-28-5208     TCGA-28-5209 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-1970     TCGA-32-1977     TCGA-32-1979     TCGA-32-1980 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-1982     TCGA-32-1986     TCGA-32-1991     TCGA-32-2491 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-2494     TCGA-32-2495     TCGA-32-2615     TCGA-32-2632 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4208     TCGA-32-4209 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-4210     TCGA-32-4211     TCGA-32-4213     TCGA-32-4719 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-5222     TCGA-41-2571     TCGA-41-2572     TCGA-41-2573 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-41-2575     TCGA-41-3392     TCGA-41-3393     TCGA-41-3915 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-41-4097     TCGA-41-5651     TCGA-76-4925     TCGA-76-4926 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6282     TCGA-76-6285 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-81-5910     TCGA-87-5896 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SYBU MUTATED        0      1      1      0
  SYBU WILD-TYPE     70     97     43     63
D154V3, multiclass
[1] "Remove cluster labels:" "SYBU MUTATED"          
clus
  SYBU MUTATED SYBU WILD-TYPE 
             2            273 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1806 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-06-6693     TCGA-06-6694 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-6695     TCGA-06-6697     TCGA-06-6698     TCGA-06-6699 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-6700     TCGA-06-6701     TCGA-08-0386     TCGA-12-0616 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0740     TCGA-14-0781     TCGA-14-0786 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-0787     TCGA-14-0789     TCGA-14-0790     TCGA-14-0813 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-0817     TCGA-14-0862     TCGA-14-0871     TCGA-14-1043 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-1395     TCGA-14-1450     TCGA-14-1456     TCGA-14-1823 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-1825     TCGA-14-1829     TCGA-14-2554     TCGA-14-3476 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-4157     TCGA-15-0742     TCGA-15-1444     TCGA-16-0846 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-16-0861     TCGA-16-1045     TCGA-16-1048     TCGA-19-1390 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-19-1790     TCGA-19-2619     TCGA-19-2620     TCGA-19-2623 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-19-2624     TCGA-19-2625     TCGA-19-2629     TCGA-19-2631 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-19-4068     TCGA-19-5947     TCGA-19-5950     TCGA-19-5951 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-19-5952     TCGA-19-5953     TCGA-19-5954     TCGA-19-5955 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-19-5958     TCGA-19-5959     TCGA-19-5960     TCGA-26-1439 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-26-6173 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-26-6174     TCGA-27-1830     TCGA-27-1831     TCGA-27-1832 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-27-1833     TCGA-27-1834     TCGA-27-1835     TCGA-27-1836 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-27-1837     TCGA-27-1838     TCGA-27-2518     TCGA-27-2519 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-27-2521     TCGA-27-2523     TCGA-27-2524     TCGA-27-2526 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-27-2527     TCGA-27-2528     TCGA-28-1747     TCGA-28-1753 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5211     TCGA-28-5213     TCGA-28-5214 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5219 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-5220     TCGA-28-6450     TCGA-32-1970     TCGA-32-1977 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-1979     TCGA-32-1980     TCGA-32-1982     TCGA-32-1986 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-1991     TCGA-32-2491     TCGA-32-2494     TCGA-32-2495 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-2615     TCGA-32-2632     TCGA-32-2634     TCGA-32-2638 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-4208     TCGA-32-4209     TCGA-32-4210     TCGA-32-4211 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-4213     TCGA-32-4719     TCGA-32-5222     TCGA-41-2571 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-41-2572     TCGA-41-2573     TCGA-41-2575     TCGA-41-3392 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-41-3393     TCGA-41-3915     TCGA-41-4097     TCGA-41-5651 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-41-6646     TCGA-74-6573     TCGA-74-6575     TCGA-74-6577 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-74-6578     TCGA-74-6584     TCGA-76-4925     TCGA-76-4926 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6280     TCGA-76-6282 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-87-5896 
"SYBU WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SYBU MUTATED        2      0      0
  SYBU WILD-TYPE    136     61     76
D154V4, multiclass
[1] "Remove cluster labels:" "SYBU MUTATED"          
clus
  SYBU MUTATED SYBU WILD-TYPE 
             2            273 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1806 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5411     TCGA-06-5412     TCGA-06-5413 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-6390     TCGA-06-6391     TCGA-06-6693     TCGA-06-6694 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-6695     TCGA-06-6697     TCGA-06-6698     TCGA-06-6699 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-6700     TCGA-06-6701     TCGA-08-0386     TCGA-12-0616 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-12-0618     TCGA-12-0619     TCGA-12-0688     TCGA-12-0692 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-12-0821     TCGA-12-1597     TCGA-12-3649     TCGA-12-3650 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-12-5301     TCGA-14-0740     TCGA-14-0781     TCGA-14-0786 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-0787     TCGA-14-0789     TCGA-14-0790     TCGA-14-0813 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-0817     TCGA-14-0862     TCGA-14-0871     TCGA-14-1043 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-1395     TCGA-14-1450     TCGA-14-1456     TCGA-14-1823 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-1825     TCGA-14-1829     TCGA-14-2554     TCGA-14-3476 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-4157     TCGA-15-0742     TCGA-15-1444     TCGA-16-0846 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-16-0861     TCGA-16-1045     TCGA-16-1048     TCGA-19-1390 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-19-1790     TCGA-19-2619     TCGA-19-2620     TCGA-19-2623 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-19-2624     TCGA-19-2625     TCGA-19-2629     TCGA-19-2631 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-19-4068     TCGA-19-5947     TCGA-19-5950     TCGA-19-5951 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-19-5952     TCGA-19-5953     TCGA-19-5954     TCGA-19-5955 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-19-5958     TCGA-19-5959     TCGA-19-5960     TCGA-26-1439 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-26-6173 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-26-6174     TCGA-27-1830     TCGA-27-1831     TCGA-27-1832 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-27-1833     TCGA-27-1834     TCGA-27-1835     TCGA-27-1836 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-27-1837     TCGA-27-1838     TCGA-27-2518     TCGA-27-2519 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-27-2521     TCGA-27-2523     TCGA-27-2524     TCGA-27-2526 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-27-2527     TCGA-27-2528     TCGA-28-1747     TCGA-28-1753 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5211     TCGA-28-5213     TCGA-28-5214 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-5215     TCGA-28-5216     TCGA-28-5218     TCGA-28-5219 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-5220     TCGA-28-6450     TCGA-32-1970     TCGA-32-1977 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-1979     TCGA-32-1980     TCGA-32-1982     TCGA-32-1986 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-1991     TCGA-32-2491     TCGA-32-2494     TCGA-32-2495 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-2615     TCGA-32-2632     TCGA-32-2634     TCGA-32-2638 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-4208     TCGA-32-4209     TCGA-32-4210     TCGA-32-4211 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-4213     TCGA-32-4719     TCGA-32-5222     TCGA-41-2571 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-41-2572     TCGA-41-2573     TCGA-41-2575     TCGA-41-3392 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-41-3393     TCGA-41-3915     TCGA-41-4097     TCGA-41-5651 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-41-6646     TCGA-74-6573     TCGA-74-6575     TCGA-74-6577 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-74-6578     TCGA-74-6584     TCGA-76-4925     TCGA-76-4926 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6280     TCGA-76-6282 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-87-5896 
"SYBU WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SYBU MUTATED        1      1      1
  SYBU WILD-TYPE    291    431     61
D154V5, multiclass
        clus
vv       SYBU MUTATED SYBU WILD-TYPE
  CLUS_1            1            291
  CLUS_2            1            431
  CLUS_3            1             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SYBU MUTATED        1      2      0      0
  SYBU WILD-TYPE    152    221     88    161
D154V6, multiclass
        clus
vv       SYBU MUTATED SYBU WILD-TYPE
  CLUS_1            1            152
  CLUS_2            2            221
  CLUS_3            0             88
  CLUS_4            0            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SYBU MUTATED        1      1      0      1
  SYBU WILD-TYPE    184    154    138     94
D154V7, multiclass
        clus
vv       SYBU MUTATED SYBU WILD-TYPE
  CLUS_1            1            184
  CLUS_2            1            154
  CLUS_3            0            138
  CLUS_4            1             94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SYBU MUTATED        1      1      1
  SYBU WILD-TYPE    204    219    147
D154V8, multiclass
        clus
vv       SYBU MUTATED SYBU WILD-TYPE
  CLUS_1            1            204
  CLUS_2            1            219
  CLUS_3            1            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SYBU MUTATED        1      0      1
  SYBU WILD-TYPE    237    191    227
D154V9, multiclass
[1] "Remove cluster labels:" "SYBU MUTATED"          
clus
  SYBU MUTATED SYBU WILD-TYPE 
             2            655 
    TCGA-02-0047     TCGA-02-0055     TCGA-02-2483     TCGA-02-2485 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-02-2486     TCGA-06-0129     TCGA-06-0130     TCGA-06-0132 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0141     TCGA-06-0157     TCGA-06-0158     TCGA-06-0168 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0174     TCGA-06-0178     TCGA-06-0184     TCGA-06-0219 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0238     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0649     TCGA-06-0686     TCGA-06-0743     TCGA-06-0744 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0745     TCGA-06-0747     TCGA-06-0749     TCGA-06-0750 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0878     TCGA-06-0882     TCGA-06-2557     TCGA-06-2558 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-2559     TCGA-06-2561     TCGA-06-2562     TCGA-06-2563 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-2564     TCGA-06-2565     TCGA-06-2567     TCGA-06-2569 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-2570     TCGA-06-5408     TCGA-06-5410     TCGA-06-5411 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-5412     TCGA-06-5413     TCGA-06-5414     TCGA-06-5415 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-5417     TCGA-06-5418     TCGA-06-5856     TCGA-06-5858 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-5859     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0821     TCGA-12-1597     TCGA-12-3650 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-0817     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-2554     TCGA-15-0742     TCGA-15-1444     TCGA-16-0846 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-16-1045     TCGA-19-1390     TCGA-19-2619     TCGA-19-2620 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-19-2624     TCGA-19-2625     TCGA-19-2629     TCGA-19-5960 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-27-1830 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1834     TCGA-27-1835 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-27-1837     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2528     TCGA-28-1747 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2499     TCGA-28-2509     TCGA-28-2510 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5213     TCGA-28-5215 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5220     TCGA-32-1970 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-2615     TCGA-32-2632 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4213     TCGA-32-5222 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-3915     TCGA-41-4097 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-41-5651     TCGA-76-4925     TCGA-76-4926     TCGA-76-4927 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-76-4928     TCGA-76-4929     TCGA-76-4931     TCGA-76-4932 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75M 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6392     TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7011 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7018 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A74J     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6     TCGA-P5-A72U 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A736 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX     TCGA-QH-A6CY 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SYBU MUTATED        1      1      0
  SYBU WILD-TYPE    195    190    270
D154V10, multiclass
[1] "Remove cluster labels:" "SYBU MUTATED"          
clus
  SYBU MUTATED SYBU WILD-TYPE 
             2            655 
    TCGA-02-0047     TCGA-02-0055     TCGA-02-2483     TCGA-02-2485 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-02-2486     TCGA-06-0129     TCGA-06-0130     TCGA-06-0132 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0141     TCGA-06-0157     TCGA-06-0158     TCGA-06-0168 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0174     TCGA-06-0178     TCGA-06-0184     TCGA-06-0219 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0238     TCGA-06-0644     TCGA-06-0645     TCGA-06-0646 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0649     TCGA-06-0686     TCGA-06-0743     TCGA-06-0744 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0745     TCGA-06-0747     TCGA-06-0749     TCGA-06-0750 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-0878     TCGA-06-0882     TCGA-06-2557     TCGA-06-2558 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-2559     TCGA-06-2561     TCGA-06-2562     TCGA-06-2563 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-2564     TCGA-06-2565     TCGA-06-2567     TCGA-06-2569 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-2570     TCGA-06-5408     TCGA-06-5410     TCGA-06-5411 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-5412     TCGA-06-5413     TCGA-06-5414     TCGA-06-5415 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-5417     TCGA-06-5418     TCGA-06-5856     TCGA-06-5858 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-06-5859     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0821     TCGA-12-1597     TCGA-12-3650 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-12-3652     TCGA-12-3653     TCGA-12-5295     TCGA-12-5299 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-0817     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-14-2554     TCGA-15-0742     TCGA-15-1444     TCGA-16-0846 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-16-1045     TCGA-19-1390     TCGA-19-2619     TCGA-19-2620 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-19-2624     TCGA-19-2625     TCGA-19-2629     TCGA-19-5960 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-27-1830 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-27-1831     TCGA-27-1832     TCGA-27-1834     TCGA-27-1835 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-27-1837     TCGA-27-2519     TCGA-27-2521     TCGA-27-2523 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-27-2524     TCGA-27-2526     TCGA-27-2528     TCGA-28-1747 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2499     TCGA-28-2509     TCGA-28-2510 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5213     TCGA-28-5215 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5220     TCGA-32-1970 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-2615     TCGA-32-2632 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-32-2634     TCGA-32-2638     TCGA-32-4213     TCGA-32-5222 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-3915     TCGA-41-4097 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-41-5651     TCGA-76-4925     TCGA-76-4926     TCGA-76-4927 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-76-4928     TCGA-76-4929     TCGA-76-4931     TCGA-76-4932 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75M 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6392     TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7011 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7018 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A74J     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6     TCGA-P5-A72U 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A736 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX     TCGA-QH-A6CY 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SYBU MUTATED        1      0      0      0
  SYBU WILD-TYPE    139    107     83    182
D154V11, multiclass
[1] "Remove cluster labels:" "SYBU MUTATED"          
clus
  SYBU MUTATED SYBU WILD-TYPE 
             1            511 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7014     TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A7T8     TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SYBU MUTATED        1      0      0
  SYBU WILD-TYPE    222    186    103
D154V12, multiclass
[1] "Remove cluster labels:" "SYBU MUTATED"          
clus
  SYBU MUTATED SYBU WILD-TYPE 
             1            511 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7014     TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A7T8     TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SYBU MUTATED        1      0      0      0
  SYBU WILD-TYPE    126    119    106    156
D154V13, multiclass
[1] "Remove cluster labels:" "SYBU MUTATED"          
clus
  SYBU MUTATED SYBU WILD-TYPE 
             1            507 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  SYBU MUTATED        1      0      0      0      0      0
  SYBU WILD-TYPE     98     77    120     57     63     92
D154V14, multiclass
[1] "Remove cluster labels:" "SYBU MUTATED"          
clus
  SYBU MUTATED SYBU WILD-TYPE 
             1            507 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"SYBU WILD-TYPE" "SYBU WILD-TYPE" "SYBU WILD-TYPE" 

Clustering(155) Variable = WDR90 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WDR90 MUTATED        0      1      3      0
  WDR90 WILD-TYPE     78     40     61     57
D155V1, multiclass
        clus
vv       WDR90 MUTATED WDR90 WILD-TYPE
  CLUS_1             0              78
  CLUS_2             1              40
  CLUS_3             3              61
  CLUS_4             0              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WDR90 MUTATED        0      1      2      1
  WDR90 WILD-TYPE     63     49     46     78
D155V2, multiclass
        clus
vv       WDR90 MUTATED WDR90 WILD-TYPE
  CLUS_1             0              63
  CLUS_2             1              49
  CLUS_3             2              46
  CLUS_4             1              78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WDR90 MUTATED        0      6      0      0
  WDR90 WILD-TYPE     70     92     44     63
D155V3, multiclass
        clus
vv       WDR90 MUTATED WDR90 WILD-TYPE
  CLUS_1             0              70
  CLUS_2             6              92
  CLUS_3             0              44
  CLUS_4             0              63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  WDR90 MUTATED        4      0      2
  WDR90 WILD-TYPE    134     61     74
D155V4, multiclass
        clus
vv       WDR90 MUTATED WDR90 WILD-TYPE
  CLUS_1             4             134
  CLUS_2             0              61
  CLUS_3             2              74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  WDR90 MUTATED        6      3      0
  WDR90 WILD-TYPE    286    429     62
D155V5, multiclass
        clus
vv       WDR90 MUTATED WDR90 WILD-TYPE
  CLUS_1             6             286
  CLUS_2             3             429
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WDR90 MUTATED        3      1      0      2
  WDR90 WILD-TYPE    150    222     88    159
D155V6, multiclass
        clus
vv       WDR90 MUTATED WDR90 WILD-TYPE
  CLUS_1             3             150
  CLUS_2             1             222
  CLUS_3             0              88
  CLUS_4             2             159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WDR90 MUTATED        3      1      3      0
  WDR90 WILD-TYPE    182    154    135     95
D155V7, multiclass
        clus
vv       WDR90 MUTATED WDR90 WILD-TYPE
  CLUS_1             3             182
  CLUS_2             1             154
  CLUS_3             3             135
  CLUS_4             0              95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  WDR90 MUTATED        5      2      0
  WDR90 WILD-TYPE    200    218    148
D155V8, multiclass
        clus
vv       WDR90 MUTATED WDR90 WILD-TYPE
  CLUS_1             5             200
  CLUS_2             2             218
  CLUS_3             0             148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  WDR90 MUTATED        5      2      0
  WDR90 WILD-TYPE    233    189    228
D155V9, multiclass
        clus
vv       WDR90 MUTATED WDR90 WILD-TYPE
  CLUS_1             5             233
  CLUS_2             2             189
  CLUS_3             0             228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  WDR90 MUTATED        4      1      2
  WDR90 WILD-TYPE    192    190    268
D155V10, multiclass
        clus
vv       WDR90 MUTATED WDR90 WILD-TYPE
  CLUS_1             4             192
  CLUS_2             1             190
  CLUS_3             2             268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WDR90 MUTATED        0      1      1      1
  WDR90 WILD-TYPE    140    106     82    181
D155V11, multiclass
        clus
vv       WDR90 MUTATED WDR90 WILD-TYPE
  CLUS_1             0             140
  CLUS_2             1             106
  CLUS_3             1              82
  CLUS_4             1             181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  WDR90 MUTATED        1      1      1
  WDR90 WILD-TYPE    222    185    102
D155V12, multiclass
        clus
vv       WDR90 MUTATED WDR90 WILD-TYPE
  CLUS_1             1             222
  CLUS_2             1             185
  CLUS_3             1             102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WDR90 MUTATED        0      0      1      2
  WDR90 WILD-TYPE    127    119    105    154
D155V13, multiclass
        clus
vv       WDR90 MUTATED WDR90 WILD-TYPE
  CLUS_1             0             127
  CLUS_2             0             119
  CLUS_3             1             105
  CLUS_4             2             154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  WDR90 MUTATED        0      0      1      1      0      1
  WDR90 WILD-TYPE     99     77    119     56     63     91
D155V14, multiclass
        clus
vv       WDR90 MUTATED WDR90 WILD-TYPE
  CLUS_1             0              99
  CLUS_2             0              77
  CLUS_3             1             119
  CLUS_4             1              56
  CLUS_5             0              63
  CLUS_6             1              91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(156) Variable = TP63 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP63 MUTATED        1      1      2      1
  TP63 WILD-TYPE     77     40     62     56
D156V1, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            1             77
  CLUS_2            1             40
  CLUS_3            2             62
  CLUS_4            1             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP63 MUTATED        1      1      2      1
  TP63 WILD-TYPE     62     49     46     78
D156V2, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            1             62
  CLUS_2            1             49
  CLUS_3            2             46
  CLUS_4            1             78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP63 MUTATED        2      1      0      3
  TP63 WILD-TYPE     68     97     44     60
D156V3, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            2             68
  CLUS_2            1             97
  CLUS_3            0             44
  CLUS_4            3             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP63 MUTATED        2      2      2
  TP63 WILD-TYPE    136     59     74
D156V4, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            2            136
  CLUS_2            2             59
  CLUS_3            2             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP63 MUTATED        6      4      0
  TP63 WILD-TYPE    286    428     62
D156V5, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            6            286
  CLUS_2            4            428
  CLUS_3            0             62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP63 MUTATED        5      3      0      0
  TP63 WILD-TYPE    148    220     88    161
D156V6, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            5            148
  CLUS_2            3            220
  CLUS_3            0             88
  CLUS_4            0            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP63 MUTATED        1      0      5      2
  TP63 WILD-TYPE    184    155    133     93
D156V7, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            1            184
  CLUS_2            0            155
  CLUS_3            5            133
  CLUS_4            2             93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP63 MUTATED        5      3      0
  TP63 WILD-TYPE    200    217    148
D156V8, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            5            200
  CLUS_2            3            217
  CLUS_3            0            148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP63 MUTATED        5      0      2
  TP63 WILD-TYPE    233    191    226
D156V9, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            5            233
  CLUS_2            0            191
  CLUS_3            2            226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP63 MUTATED        3      4      0
  TP63 WILD-TYPE    193    187    270
D156V10, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            3            193
  CLUS_2            4            187
  CLUS_3            0            270
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP63 MUTATED        2      1      1      0
  TP63 WILD-TYPE    138    106     82    182
D156V11, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            2            138
  CLUS_2            1            106
  CLUS_3            1             82
  CLUS_4            0            182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP63 MUTATED        3      0      1
  TP63 WILD-TYPE    220    186    102
D156V12, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            3            220
  CLUS_2            0            186
  CLUS_3            1            102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP63 MUTATED        1      3      0      0
  TP63 WILD-TYPE    126    116    106    156
D156V13, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            1            126
  CLUS_2            3            116
  CLUS_3            0            106
  CLUS_4            0            156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  TP63 MUTATED        2      2      0      0      0      0
  TP63 WILD-TYPE     97     75    120     57     63     92
D156V14, multiclass
        clus
vv       TP63 MUTATED TP63 WILD-TYPE
  CLUS_1            2             97
  CLUS_2            2             75
  CLUS_3            0            120
  CLUS_4            0             57
  CLUS_5            0             63
  CLUS_6            0             92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(157) Variable = AK7 MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AK7 MUTATED        0      0      2      3
  AK7 WILD-TYPE     78     41     62     54
D157V1, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           0            78
  CLUS_2           0            41
  CLUS_3           2            62
  CLUS_4           3            54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AK7 MUTATED        0      0      1      4
  AK7 WILD-TYPE     63     50     47     75
D157V2, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           0            63
  CLUS_2           0            50
  CLUS_3           1            47
  CLUS_4           4            75
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AK7 MUTATED        1      3      1      0
  AK7 WILD-TYPE     69     95     43     63
D157V3, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           1            69
  CLUS_2           3            95
  CLUS_3           1            43
  CLUS_4           0            63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  AK7 MUTATED        2      0      3
  AK7 WILD-TYPE    136     61     73
D157V4, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           2           136
  CLUS_2           0            61
  CLUS_3           3            73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  AK7 MUTATED        7      1      1
  AK7 WILD-TYPE    285    431     61
D157V5, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           7           285
  CLUS_2           1           431
  CLUS_3           1            61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AK7 MUTATED        4      1      0      0
  AK7 WILD-TYPE    149    222     88    161
D157V6, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           4           149
  CLUS_2           1           222
  CLUS_3           0            88
  CLUS_4           0           161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AK7 MUTATED        1      3      2      1
  AK7 WILD-TYPE    184    152    136     94
D157V7, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           1           184
  CLUS_2           3           152
  CLUS_3           2           136
  CLUS_4           1            94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  AK7 MUTATED        1      4      2
  AK7 WILD-TYPE    204    216    146
D157V8, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           1           204
  CLUS_2           4           216
  CLUS_3           2           146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  AK7 MUTATED        6      1      0
  AK7 WILD-TYPE    232    190    228
D157V9, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           6           232
  CLUS_2           1           190
  CLUS_3           0           228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  AK7 MUTATED        5      1      1
  AK7 WILD-TYPE    191    190    269
D157V10, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           5           191
  CLUS_2           1           190
  CLUS_3           1           269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AK7 MUTATED        0      3      0      1
  AK7 WILD-TYPE    140    104     83    181
D157V11, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           0           140
  CLUS_2           3           104
  CLUS_3           0            83
  CLUS_4           1           181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  AK7 MUTATED        0      0      4
  AK7 WILD-TYPE    223    186     99
D157V12, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           0           223
  CLUS_2           0           186
  CLUS_3           4            99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AK7 MUTATED        3      0      0      1
  AK7 WILD-TYPE    124    119    106    155
D157V13, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           3           124
  CLUS_2           0           119
  CLUS_3           0           106
  CLUS_4           1           155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  AK7 MUTATED        0      1      0      0      3      0
  AK7 WILD-TYPE     99     76    120     57     60     92
D157V14, multiclass
        clus
vv       AK7 MUTATED AK7 WILD-TYPE
  CLUS_1           0            99
  CLUS_2           1            76
  CLUS_3           0           120
  CLUS_4           0            57
  CLUS_5           3            60
  CLUS_6           0            92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(158) Variable = SLC2A3 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC2A3 MUTATED        2      0      0      0
  SLC2A3 WILD-TYPE     76     41     64     57
D158V1, multiclass
[1] "Remove cluster labels:" "SLC2A3 MUTATED"        
clus
  SLC2A3 MUTATED SLC2A3 WILD-TYPE 
               2              238 
      TCGA-02-0033       TCGA-02-0047       TCGA-02-2470       TCGA-02-2483 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-02-2485       TCGA-02-2486       TCGA-06-0122       TCGA-06-0124 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0126       TCGA-06-0128       TCGA-06-0129       TCGA-06-0130 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0132       TCGA-06-0137       TCGA-06-0139       TCGA-06-0140 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0142       TCGA-06-0145       TCGA-06-0152 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0154       TCGA-06-0155       TCGA-06-0157       TCGA-06-0158 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0166       TCGA-06-0167       TCGA-06-0168       TCGA-06-0169 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0781 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0871       TCGA-14-1456 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5954       TCGA-19-5955 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-27-1830 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2501       TCGA-28-2502 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-28-2509       TCGA-28-2510       TCGA-28-2513       TCGA-28-2514 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-28-5204       TCGA-28-5207       TCGA-28-5208       TCGA-28-5209 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC2A3 MUTATED        2      0      0      0
  SLC2A3 WILD-TYPE     61     50     48     79
D158V2, multiclass
[1] "Remove cluster labels:" "SLC2A3 MUTATED"        
clus
  SLC2A3 MUTATED SLC2A3 WILD-TYPE 
               2              238 
      TCGA-02-0033       TCGA-02-0047       TCGA-02-2470       TCGA-02-2483 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-02-2485       TCGA-02-2486       TCGA-06-0122       TCGA-06-0124 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0126       TCGA-06-0128       TCGA-06-0129       TCGA-06-0130 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0132       TCGA-06-0137       TCGA-06-0139       TCGA-06-0140 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0142       TCGA-06-0145       TCGA-06-0152 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0154       TCGA-06-0155       TCGA-06-0157       TCGA-06-0158 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0166       TCGA-06-0167       TCGA-06-0168       TCGA-06-0169 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-2557 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-2558       TCGA-06-2559       TCGA-06-2561       TCGA-06-2562 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-2563       TCGA-06-2564       TCGA-06-2565       TCGA-06-2567 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-2569       TCGA-06-2570       TCGA-06-5408       TCGA-06-5410 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-5411       TCGA-06-5412       TCGA-06-5413       TCGA-06-5414 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-5415       TCGA-06-5417       TCGA-06-5418       TCGA-06-5856 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-5858       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0781 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0871       TCGA-14-1456 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5954       TCGA-19-5955 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-27-1830 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2501       TCGA-28-2502 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-28-2509       TCGA-28-2510       TCGA-28-2513       TCGA-28-2514 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-28-5204       TCGA-28-5207       TCGA-28-5208       TCGA-28-5209 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1986       TCGA-32-1991       TCGA-32-2491 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-32-2494       TCGA-32-2495       TCGA-32-2615       TCGA-32-2632 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-32-2634       TCGA-32-2638       TCGA-32-4208       TCGA-32-4209 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-32-4210       TCGA-32-4211       TCGA-32-4213       TCGA-32-4719 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-32-5222       TCGA-41-2571       TCGA-41-2572       TCGA-41-2573 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-41-2575       TCGA-41-3392       TCGA-41-3393       TCGA-41-3915 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-41-4097       TCGA-41-5651       TCGA-76-4925       TCGA-76-4926 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6282       TCGA-76-6285 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-81-5910       TCGA-87-5896 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC2A3 MUTATED        0      2      0      0
  SLC2A3 WILD-TYPE     70     96     44     63
D158V3, multiclass
[1] "Remove cluster labels:" "SLC2A3 MUTATED"        
clus
  SLC2A3 MUTATED SLC2A3 WILD-TYPE 
               2              273 
      TCGA-02-0033       TCGA-02-0047       TCGA-02-0055       TCGA-02-2470 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0137       TCGA-06-0139       TCGA-06-0140 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0142       TCGA-06-0145       TCGA-06-0151 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0168       TCGA-06-0169 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-1806 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0688       TCGA-12-0692 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0740       TCGA-14-0781       TCGA-14-0786 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-14-0787       TCGA-14-0789       TCGA-14-0790       TCGA-14-0813 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-14-0817       TCGA-14-0862       TCGA-14-0871       TCGA-14-1043 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-14-1395       TCGA-14-1450       TCGA-14-1456       TCGA-14-1823 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-14-1825       TCGA-14-1829       TCGA-14-2554       TCGA-14-3476 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-14-4157       TCGA-15-0742       TCGA-15-1444       TCGA-16-0846 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-16-0861       TCGA-16-1045       TCGA-16-1048       TCGA-19-1390 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-19-1790       TCGA-19-2619       TCGA-19-2620       TCGA-19-2623 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-19-2624       TCGA-19-2625       TCGA-19-2629       TCGA-19-2631 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-19-4068       TCGA-19-5947       TCGA-19-5950       TCGA-19-5951 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-19-5952       TCGA-19-5953       TCGA-19-5954       TCGA-19-5955 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-26-6173 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-26-6174       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5211       TCGA-28-5213       TCGA-28-5214 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-87-5896 
"SLC2A3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC2A3 MUTATED        1      0      1
  SLC2A3 WILD-TYPE    137     61     75
D158V4, multiclass
[1] "Remove cluster labels:" "SLC2A3 MUTATED"        
clus
  SLC2A3 MUTATED SLC2A3 WILD-TYPE 
               2              273 
      TCGA-02-0033       TCGA-02-0047       TCGA-02-0055       TCGA-02-2470 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0137       TCGA-06-0139       TCGA-06-0140 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0141       TCGA-06-0142       TCGA-06-0145       TCGA-06-0151 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0168       TCGA-06-0169 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0173       TCGA-06-0174       TCGA-06-0178       TCGA-06-0184 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0185       TCGA-06-0188       TCGA-06-0189       TCGA-06-0192 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0195       TCGA-06-0213       TCGA-06-0214       TCGA-06-0216 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0219       TCGA-06-0237       TCGA-06-0238       TCGA-06-0240 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0241       TCGA-06-0644       TCGA-06-0645       TCGA-06-0646 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0648       TCGA-06-0649       TCGA-06-0650       TCGA-06-0686 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0743       TCGA-06-0744       TCGA-06-0745       TCGA-06-0747 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0749       TCGA-06-0750       TCGA-06-0875       TCGA-06-0876 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0877       TCGA-06-0878       TCGA-06-0879       TCGA-06-0881 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-0882       TCGA-06-0939       TCGA-06-1804       TCGA-06-1806 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6388 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0688       TCGA-12-0692 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0740       TCGA-14-0781       TCGA-14-0786 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-14-0787       TCGA-14-0789       TCGA-14-0790       TCGA-14-0813 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-14-0817       TCGA-14-0862       TCGA-14-0871       TCGA-14-1043 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-14-1395       TCGA-14-1450       TCGA-14-1456       TCGA-14-1823 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-14-1825       TCGA-14-1829       TCGA-14-2554       TCGA-14-3476 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-14-4157       TCGA-15-0742       TCGA-15-1444       TCGA-16-0846 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-16-0861       TCGA-16-1045       TCGA-16-1048       TCGA-19-1390 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-19-1790       TCGA-19-2619       TCGA-19-2620       TCGA-19-2623 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-19-2624       TCGA-19-2625       TCGA-19-2629       TCGA-19-2631 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-19-4068       TCGA-19-5947       TCGA-19-5950       TCGA-19-5951 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-19-5952       TCGA-19-5953       TCGA-19-5954       TCGA-19-5955 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-19-5958       TCGA-19-5959       TCGA-19-5960       TCGA-26-1439 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-26-1442       TCGA-26-5132       TCGA-26-5133       TCGA-26-5134 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-26-5135       TCGA-26-5136       TCGA-26-5139       TCGA-26-6173 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-26-6174       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5211       TCGA-28-5213       TCGA-28-5214 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1986 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-32-1991       TCGA-32-2491       TCGA-32-2494       TCGA-32-2495 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-32-2615       TCGA-32-2632       TCGA-32-2634       TCGA-32-2638 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-32-4208       TCGA-32-4209       TCGA-32-4210       TCGA-32-4211 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-32-4213       TCGA-32-4719       TCGA-32-5222       TCGA-41-2571 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-41-2572       TCGA-41-2573       TCGA-41-2575       TCGA-41-3392 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-41-3393       TCGA-41-3915       TCGA-41-4097       TCGA-41-5651 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-41-6646       TCGA-74-6573       TCGA-74-6575       TCGA-74-6577 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-74-6578       TCGA-74-6584       TCGA-76-4925       TCGA-76-4926 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-76-4927       TCGA-76-4928       TCGA-76-4929       TCGA-76-4931 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-76-4932       TCGA-76-4934       TCGA-76-4935       TCGA-76-6191 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-76-6192       TCGA-76-6193       TCGA-76-6280       TCGA-76-6282 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-76-6283       TCGA-76-6285       TCGA-76-6286       TCGA-76-6656 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-76-6657       TCGA-76-6660       TCGA-76-6661       TCGA-76-6662 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-76-6663       TCGA-76-6664       TCGA-81-5910       TCGA-81-5911 
"SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" "SLC2A3 WILD-TYPE" 
      TCGA-87-5896 
"SLC2A3 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC2A3 MUTATED        4      1      0
  SLC2A3 WILD-TYPE    288    431     62
D158V5, multiclass
        clus
vv       SLC2A3 MUTATED SLC2A3 WILD-TYPE
  CLUS_1              4              288
  CLUS_2              1              431
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC2A3 MUTATED        2      0      0      1
  SLC2A3 WILD-TYPE    151    223     88    160
D158V6, multiclass
        clus
vv       SLC2A3 MUTATED SLC2A3 WILD-TYPE
  CLUS_1              2              151
  CLUS_2              0              223
  CLUS_3              0               88
  CLUS_4              1              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC2A3 MUTATED        3      0      1      0
  SLC2A3 WILD-TYPE    182    155    137     95
D158V7, multiclass
        clus
vv       SLC2A3 MUTATED SLC2A3 WILD-TYPE
  CLUS_1              3              182
  CLUS_2              0              155
  CLUS_3              1              137
  CLUS_4              0               95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC2A3 MUTATED        2      2      0
  SLC2A3 WILD-TYPE    203    218    148
D158V8, multiclass
        clus
vv       SLC2A3 MUTATED SLC2A3 WILD-TYPE
  CLUS_1              2              203
  CLUS_2              2              218
  CLUS_3              0              148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC2A3 MUTATED        3      1      0
  SLC2A3 WILD-TYPE    235    190    228
D158V9, multiclass
        clus
vv       SLC2A3 MUTATED SLC2A3 WILD-TYPE
  CLUS_1              3              235
  CLUS_2              1              190
  CLUS_3              0              228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC2A3 MUTATED        2      1      1
  SLC2A3 WILD-TYPE    194    190    269
D158V10, multiclass
        clus
vv       SLC2A3 MUTATED SLC2A3 WILD-TYPE
  CLUS_1              2              194
  CLUS_2              1              190
  CLUS_3              1              269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC2A3 MUTATED        0      2      1      0
  SLC2A3 WILD-TYPE    140    105     82    182
D158V11, multiclass
        clus
vv       SLC2A3 MUTATED SLC2A3 WILD-TYPE
  CLUS_1              0              140
  CLUS_2              2              105
  CLUS_3              1               82
  CLUS_4              0              182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC2A3 MUTATED        0      1      2
  SLC2A3 WILD-TYPE    223    185    101
D158V12, multiclass
        clus
vv       SLC2A3 MUTATED SLC2A3 WILD-TYPE
  CLUS_1              0              223
  CLUS_2              1              185
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC2A3 MUTATED        1      0      1      1
  SLC2A3 WILD-TYPE    126    119    105    155
D158V13, multiclass
        clus
vv       SLC2A3 MUTATED SLC2A3 WILD-TYPE
  CLUS_1              1              126
  CLUS_2              0              119
  CLUS_3              1              105
  CLUS_4              1              155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  SLC2A3 MUTATED        0      0      0      1      1      1
  SLC2A3 WILD-TYPE     99     77    120     56     62     91
D158V14, multiclass
        clus
vv       SLC2A3 MUTATED SLC2A3 WILD-TYPE
  CLUS_1              0               99
  CLUS_2              0               77
  CLUS_3              0              120
  CLUS_4              1               56
  CLUS_5              1               62
  CLUS_6              1               91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(159) Variable = DSP MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DSP MUTATED        2      0      2      4
  DSP WILD-TYPE     76     41     62     53
D159V1, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           2            76
  CLUS_2           0            41
  CLUS_3           2            62
  CLUS_4           4            53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DSP MUTATED        2      1      2      3
  DSP WILD-TYPE     61     49     46     76
D159V2, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           2            61
  CLUS_2           1            49
  CLUS_3           2            46
  CLUS_4           3            76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DSP MUTATED        4      5      2      1
  DSP WILD-TYPE     66     93     42     62
D159V3, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           4            66
  CLUS_2           5            93
  CLUS_3           2            42
  CLUS_4           1            62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DSP MUTATED        6      0      6
  DSP WILD-TYPE    132     61     70
D159V4, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           6           132
  CLUS_2           0            61
  CLUS_3           6            70
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DSP MUTATED       14      5      2
  DSP WILD-TYPE    278    427     60
D159V5, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1          14           278
  CLUS_2           5           427
  CLUS_3           2            60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DSP MUTATED        8      3      2      2
  DSP WILD-TYPE    145    220     86    159
D159V6, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           8           145
  CLUS_2           3           220
  CLUS_3           2            86
  CLUS_4           2           159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DSP MUTATED        6      2      5      1
  DSP WILD-TYPE    179    153    133     94
D159V7, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           6           179
  CLUS_2           2           153
  CLUS_3           5           133
  CLUS_4           1            94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DSP MUTATED        5      7      2
  DSP WILD-TYPE    200    213    146
D159V8, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           5           200
  CLUS_2           7           213
  CLUS_3           2           146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DSP MUTATED        5      2      3
  DSP WILD-TYPE    233    189    225
D159V9, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           5           233
  CLUS_2           2           189
  CLUS_3           3           225
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DSP MUTATED        4      3      3
  DSP WILD-TYPE    192    188    267
D159V10, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           4           192
  CLUS_2           3           188
  CLUS_3           3           267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DSP MUTATED        3      3      1      2
  DSP WILD-TYPE    137    104     82    180
D159V11, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           3           137
  CLUS_2           3           104
  CLUS_3           1            82
  CLUS_4           2           180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DSP MUTATED        5      0      4
  DSP WILD-TYPE    218    186     99
D159V12, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           5           218
  CLUS_2           0           186
  CLUS_3           4            99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DSP MUTATED        3      1      3      2
  DSP WILD-TYPE    124    118    103    154
D159V13, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           3           124
  CLUS_2           1           118
  CLUS_3           3           103
  CLUS_4           2           154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  DSP MUTATED        2      1      0      1      3      2
  DSP WILD-TYPE     97     76    120     56     60     90
D159V14, multiclass
        clus
vv       DSP MUTATED DSP WILD-TYPE
  CLUS_1           2            97
  CLUS_2           1            76
  CLUS_3           0           120
  CLUS_4           1            56
  CLUS_5           3            60
  CLUS_6           2            90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(160) Variable = EGR1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGR1 MUTATED        2      0      1      0
  EGR1 WILD-TYPE     76     41     63     57
D160V1, multiclass
        clus
vv       EGR1 MUTATED EGR1 WILD-TYPE
  CLUS_1            2             76
  CLUS_2            0             41
  CLUS_3            1             63
  CLUS_4            0             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGR1 MUTATED        1      0      0      2
  EGR1 WILD-TYPE     62     50     48     77
D160V2, multiclass
        clus
vv       EGR1 MUTATED EGR1 WILD-TYPE
  CLUS_1            1             62
  CLUS_2            0             50
  CLUS_3            0             48
  CLUS_4            2             77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGR1 MUTATED        1      0      0      2
  EGR1 WILD-TYPE     69     98     44     61
D160V3, multiclass
        clus
vv       EGR1 MUTATED EGR1 WILD-TYPE
  CLUS_1            1             69
  CLUS_2            0             98
  CLUS_3            0             44
  CLUS_4            2             61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGR1 MUTATED        1      2      0
  EGR1 WILD-TYPE    137     59     76
D160V4, multiclass
        clus
vv       EGR1 MUTATED EGR1 WILD-TYPE
  CLUS_1            1            137
  CLUS_2            2             59
  CLUS_3            0             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGR1 MUTATED        2      1      2
  EGR1 WILD-TYPE    290    431     60
D160V5, multiclass
        clus
vv       EGR1 MUTATED EGR1 WILD-TYPE
  CLUS_1            2            290
  CLUS_2            1            431
  CLUS_3            2             60
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGR1 MUTATED        1      1      0      0
  EGR1 WILD-TYPE    152    222     88    161
D160V6, multiclass
[1] "Remove cluster labels:" "EGR1 MUTATED"          
clus
  EGR1 MUTATED EGR1 WILD-TYPE 
             2            623 
    TCGA-06-0152     TCGA-06-0650     TCGA-06-1804     TCGA-06-1806 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0862     TCGA-14-1043     TCGA-14-1395 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-14-1450     TCGA-15-1444     TCGA-19-5947     TCGA-19-5950 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-26-6173 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-26-6174     TCGA-28-2501     TCGA-28-2510     TCGA-28-5204 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5211 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-32-1979     TCGA-32-1980     TCGA-32-5222     TCGA-41-5651 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-41-6646     TCGA-74-6573     TCGA-74-6575     TCGA-74-6577 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-74-6578     TCGA-74-6584     TCGA-76-4925     TCGA-76-4926 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-76-4927     TCGA-76-4928     TCGA-76-4929     TCGA-76-4931 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-76-4932     TCGA-76-4934     TCGA-76-4935     TCGA-76-6191 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-76-6192     TCGA-76-6193     TCGA-76-6280     TCGA-76-6282 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-76-6283     TCGA-76-6285     TCGA-76-6286     TCGA-76-6656 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-76-6657     TCGA-76-6660     TCGA-76-6661     TCGA-76-6662 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-76-6663     TCGA-76-6664     TCGA-81-5910     TCGA-81-5911 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-87-5896     TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-4943     TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-5394     TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-6186     TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-6666     TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-6670     TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5275     TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5279     TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A4XA     TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A4XE     TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64L     TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64R     TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64W     TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A75M     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7011 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74J     TCGA-HT-A74K     TCGA-HT-A74L 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F4     TCGA-P5-A5F6     TCGA-P5-A72U 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A736 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX     TCGA-QH-A6CY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGR1 MUTATED        3      0      0      0
  EGR1 WILD-TYPE    182    155    138     95
D160V7, multiclass
        clus
vv       EGR1 MUTATED EGR1 WILD-TYPE
  CLUS_1            3            182
  CLUS_2            0            155
  CLUS_3            0            138
  CLUS_4            0             95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGR1 MUTATED        3      0      0
  EGR1 WILD-TYPE    202    220    148
D160V8, multiclass
        clus
vv       EGR1 MUTATED EGR1 WILD-TYPE
  CLUS_1            3            202
  CLUS_2            0            220
  CLUS_3            0            148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGR1 MUTATED        3      1      0
  EGR1 WILD-TYPE    235    190    228
D160V9, multiclass
        clus
vv       EGR1 MUTATED EGR1 WILD-TYPE
  CLUS_1            3            235
  CLUS_2            1            190
  CLUS_3            0            228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGR1 MUTATED        2      1      1
  EGR1 WILD-TYPE    194    190    269
D160V10, multiclass
        clus
vv       EGR1 MUTATED EGR1 WILD-TYPE
  CLUS_1            2            194
  CLUS_2            1            190
  CLUS_3            1            269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGR1 MUTATED        0      1      0      1
  EGR1 WILD-TYPE    140    106     83    181
D160V11, multiclass
[1] "Remove cluster labels:" "EGR1 MUTATED"          
clus
  EGR1 MUTATED EGR1 WILD-TYPE 
             2            510 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A7T8     TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F4     TCGA-P5-A5F6     TCGA-P5-A72U 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A736 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY     TCGA-QH-A6CZ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5     TCGA-QH-A6X8 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC     TCGA-QH-A86X 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML     TCGA-R8-A6MO 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X     TCGA-RY-A83Y 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843     TCGA-RY-A845 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU     TCGA-S9-A6TV 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY     TCGA-S9-A6TZ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2     TCGA-S9-A6U5 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9     TCGA-S9-A6UA 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EGR1 MUTATED        1      0      1
  EGR1 WILD-TYPE    222    186    102
D160V12, multiclass
[1] "Remove cluster labels:" "EGR1 MUTATED"          
clus
  EGR1 MUTATED EGR1 WILD-TYPE 
             2            510 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A7T8     TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F4     TCGA-P5-A5F6     TCGA-P5-A72U 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A736 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY     TCGA-QH-A6CZ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5     TCGA-QH-A6X8 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC     TCGA-QH-A86X 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML     TCGA-R8-A6MO 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X     TCGA-RY-A83Y 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843     TCGA-RY-A845 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU     TCGA-S9-A6TV 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY     TCGA-S9-A6TZ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2     TCGA-S9-A6U5 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9     TCGA-S9-A6UA 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGR1 MUTATED        0      1      0      1
  EGR1 WILD-TYPE    127    118    106    155
D160V13, multiclass
[1] "Remove cluster labels:" "EGR1 MUTATED"          
clus
  EGR1 MUTATED EGR1 WILD-TYPE 
             2            506 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6UA 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  EGR1 MUTATED        0      1      0      0      0      1
  EGR1 WILD-TYPE     99     76    120     57     63     91
D160V14, multiclass
[1] "Remove cluster labels:" "EGR1 MUTATED"          
clus
  EGR1 MUTATED EGR1 WILD-TYPE 
             2            506 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6393     TCGA-DU-6394 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6UA 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"EGR1 WILD-TYPE" "EGR1 WILD-TYPE" 

Clustering(161) Variable = PRB3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRB3 MUTATED        0      0      0      1
  PRB3 WILD-TYPE     78     41     64     56
D161V1, multiclass
[1] "Remove cluster labels:" "PRB3 MUTATED"          
clus
  PRB3 MUTATED PRB3 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRB3 MUTATED        0      0      0      1
  PRB3 WILD-TYPE     63     50     48     78
D161V2, multiclass
[1] "Remove cluster labels:" "PRB3 MUTATED"          
clus
  PRB3 MUTATED PRB3 WILD-TYPE 
             1            239 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-2470 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-02-2483     TCGA-02-2485     TCGA-02-2486     TCGA-06-0122 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0124     TCGA-06-0126     TCGA-06-0128     TCGA-06-0129 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0130     TCGA-06-0132     TCGA-06-0137     TCGA-06-0139 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0152     TCGA-06-0154     TCGA-06-0155     TCGA-06-0157 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0158     TCGA-06-0166     TCGA-06-0167     TCGA-06-0168 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-2557     TCGA-06-2558     TCGA-06-2559     TCGA-06-2561 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-2562     TCGA-06-2563     TCGA-06-2564     TCGA-06-2565 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-2567     TCGA-06-2569     TCGA-06-2570     TCGA-06-5408 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5410     TCGA-06-5412     TCGA-06-5413     TCGA-06-5414 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5415     TCGA-06-5417     TCGA-06-5418     TCGA-06-5856 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5858     TCGA-06-5859     TCGA-06-6389     TCGA-06-6390 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-6391     TCGA-08-0386     TCGA-12-0616     TCGA-12-0618 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-0619     TCGA-12-0688     TCGA-12-0692     TCGA-12-0821 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-1597     TCGA-12-3649     TCGA-12-3650     TCGA-12-3652 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-3653     TCGA-12-5295     TCGA-12-5299     TCGA-12-5301 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0786     TCGA-14-0787     TCGA-14-0789 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-0790     TCGA-14-0813     TCGA-14-0817     TCGA-14-0871 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-1456     TCGA-14-1823     TCGA-14-1825     TCGA-14-1829 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-2554     TCGA-14-3476     TCGA-14-4157     TCGA-15-0742 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-15-1444     TCGA-16-0846     TCGA-16-0861     TCGA-16-1045 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-16-1048     TCGA-19-1390     TCGA-19-1790     TCGA-19-2619 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-2620     TCGA-19-2623     TCGA-19-2624     TCGA-19-2625 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-2629     TCGA-19-2631     TCGA-19-4068     TCGA-19-5947 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-5950     TCGA-19-5951     TCGA-19-5952     TCGA-19-5954 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-1830     TCGA-27-1831     TCGA-27-1832     TCGA-27-1833 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-1834     TCGA-27-1835     TCGA-27-1836     TCGA-27-1837 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-1838     TCGA-27-2518     TCGA-27-2519     TCGA-27-2521 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-2523     TCGA-27-2524     TCGA-27-2526     TCGA-27-2527 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-2528     TCGA-28-1747     TCGA-28-1753     TCGA-28-2501 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-2502     TCGA-28-2509     TCGA-28-2510     TCGA-28-2513 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-2514     TCGA-28-5204     TCGA-28-5207     TCGA-28-5208 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-5209     TCGA-28-5213     TCGA-28-5214     TCGA-28-5215 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-5216     TCGA-28-5218     TCGA-28-5219     TCGA-28-5220 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-6450     TCGA-32-1970     TCGA-32-1977     TCGA-32-1979 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-1980     TCGA-32-1982     TCGA-32-1986     TCGA-32-1991 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-2491     TCGA-32-2494     TCGA-32-2495     TCGA-32-2615 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-2632     TCGA-32-2634     TCGA-32-2638     TCGA-32-4208 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-4209     TCGA-32-4210     TCGA-32-4211     TCGA-32-4213 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-4719     TCGA-32-5222     TCGA-41-2571     TCGA-41-2572 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-41-2573     TCGA-41-2575     TCGA-41-3392     TCGA-41-3393 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-41-3915     TCGA-41-4097     TCGA-41-5651     TCGA-76-4925 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6282 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6285     TCGA-81-5910     TCGA-87-5896 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRB3 MUTATED        0      0      1      0
  PRB3 WILD-TYPE     70     98     43     63
D161V3, multiclass
[1] "Remove cluster labels:" "PRB3 MUTATED"          
clus
  PRB3 MUTATED PRB3 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5412     TCGA-06-5413 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRB3 MUTATED        1      0      0
  PRB3 WILD-TYPE    137     61     76
D161V4, multiclass
[1] "Remove cluster labels:" "PRB3 MUTATED"          
clus
  PRB3 MUTATED PRB3 WILD-TYPE 
             1            274 
    TCGA-02-0003     TCGA-02-0033     TCGA-02-0047     TCGA-02-0055 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-02-2470     TCGA-02-2483     TCGA-02-2485     TCGA-02-2486 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0122     TCGA-06-0124     TCGA-06-0126     TCGA-06-0128 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0129     TCGA-06-0130     TCGA-06-0137     TCGA-06-0139 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0140     TCGA-06-0141     TCGA-06-0142     TCGA-06-0145 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0151     TCGA-06-0152     TCGA-06-0154     TCGA-06-0155 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0157     TCGA-06-0158     TCGA-06-0166     TCGA-06-0168 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0169     TCGA-06-0173     TCGA-06-0174     TCGA-06-0178 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0184     TCGA-06-0185     TCGA-06-0188     TCGA-06-0189 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0192     TCGA-06-0195     TCGA-06-0213     TCGA-06-0214 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0216     TCGA-06-0219     TCGA-06-0237     TCGA-06-0238 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0240     TCGA-06-0241     TCGA-06-0644     TCGA-06-0645 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0646     TCGA-06-0648     TCGA-06-0649     TCGA-06-0650 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0686     TCGA-06-0743     TCGA-06-0744     TCGA-06-0745 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0747     TCGA-06-0749     TCGA-06-0750     TCGA-06-0875 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0876     TCGA-06-0877     TCGA-06-0878     TCGA-06-0879 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-0881     TCGA-06-0882     TCGA-06-0939     TCGA-06-1804 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-1806     TCGA-06-2557     TCGA-06-2558     TCGA-06-2559 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-2561     TCGA-06-2562     TCGA-06-2563     TCGA-06-2564 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-2565     TCGA-06-2567     TCGA-06-2569     TCGA-06-2570 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5412     TCGA-06-5413 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5414     TCGA-06-5415     TCGA-06-5417     TCGA-06-5418 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-5856     TCGA-06-5858     TCGA-06-5859     TCGA-06-6388 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-6389     TCGA-06-6390     TCGA-06-6391     TCGA-06-6693 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-6694     TCGA-06-6695     TCGA-06-6697     TCGA-06-6698 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-06-6699     TCGA-06-6700     TCGA-06-6701     TCGA-08-0386 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-0616     TCGA-12-0618     TCGA-12-0619     TCGA-12-0688 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-0692     TCGA-12-0821     TCGA-12-1597     TCGA-12-3649 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-3650     TCGA-12-3652     TCGA-12-3653     TCGA-12-5295 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-12-5299     TCGA-12-5301     TCGA-14-0740     TCGA-14-0781 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-0786     TCGA-14-0787     TCGA-14-0789     TCGA-14-0790 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-0813     TCGA-14-0817     TCGA-14-0862     TCGA-14-0871 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-1043     TCGA-14-1395     TCGA-14-1450     TCGA-14-1456 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-1823     TCGA-14-1825     TCGA-14-1829     TCGA-14-2554 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-14-3476     TCGA-14-4157     TCGA-15-0742     TCGA-15-1444 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-16-0846     TCGA-16-0861     TCGA-16-1045     TCGA-16-1048 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-1390     TCGA-19-1790     TCGA-19-2619     TCGA-19-2620 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-2623     TCGA-19-2624     TCGA-19-2625     TCGA-19-2629 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-2631     TCGA-19-4068     TCGA-19-5947     TCGA-19-5950 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-26-1439     TCGA-26-1442     TCGA-26-5132     TCGA-26-5133 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-26-5134     TCGA-26-5135     TCGA-26-5136     TCGA-26-5139 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-26-6173     TCGA-26-6174     TCGA-27-1830     TCGA-27-1831 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-1832     TCGA-27-1833     TCGA-27-1834     TCGA-27-1835 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-1836     TCGA-27-1837     TCGA-27-1838     TCGA-27-2518 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-2519     TCGA-27-2521     TCGA-27-2523     TCGA-27-2524 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-27-2526     TCGA-27-2527     TCGA-27-2528     TCGA-28-1747 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-1753     TCGA-28-2502     TCGA-28-2509     TCGA-28-2510 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-2513     TCGA-28-2514     TCGA-28-5204     TCGA-28-5207 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-5208     TCGA-28-5209     TCGA-28-5211     TCGA-28-5213 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-5214     TCGA-28-5215     TCGA-28-5216     TCGA-28-5218 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-28-5219     TCGA-28-5220     TCGA-28-6450     TCGA-32-1970 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-1977     TCGA-32-1979     TCGA-32-1980     TCGA-32-1982 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-1986     TCGA-32-1991     TCGA-32-2491     TCGA-32-2494 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-2495     TCGA-32-2615     TCGA-32-2632     TCGA-32-2634 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-2638     TCGA-32-4208     TCGA-32-4209     TCGA-32-4210 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-32-4211     TCGA-32-4213     TCGA-32-4719     TCGA-32-5222 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-41-2571     TCGA-41-2572     TCGA-41-2573     TCGA-41-2575 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-41-3392     TCGA-41-3393     TCGA-41-3915     TCGA-41-4097 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-41-5651     TCGA-41-6646     TCGA-74-6573     TCGA-74-6575 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-74-6577     TCGA-74-6578     TCGA-74-6584     TCGA-76-4925 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-4926     TCGA-76-4927     TCGA-76-4928     TCGA-76-4929 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-4931     TCGA-76-4932     TCGA-76-4934     TCGA-76-4935 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6191     TCGA-76-6192     TCGA-76-6193     TCGA-76-6280 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6282     TCGA-76-6283     TCGA-76-6285     TCGA-76-6286 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6656     TCGA-76-6657     TCGA-76-6660     TCGA-76-6661 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-76-6662     TCGA-76-6663     TCGA-76-6664     TCGA-81-5910 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-81-5911     TCGA-87-5896 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRB3 MUTATED        1      1      1
  PRB3 WILD-TYPE    291    431     61
D161V5, multiclass
        clus
vv       PRB3 MUTATED PRB3 WILD-TYPE
  CLUS_1            1            291
  CLUS_2            1            431
  CLUS_3            1             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRB3 MUTATED        1      1      1      0
  PRB3 WILD-TYPE    152    222     87    161
D161V6, multiclass
        clus
vv       PRB3 MUTATED PRB3 WILD-TYPE
  CLUS_1            1            152
  CLUS_2            1            222
  CLUS_3            1             87
  CLUS_4            0            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRB3 MUTATED        0      1      2      0
  PRB3 WILD-TYPE    185    154    136     95
D161V7, multiclass
        clus
vv       PRB3 MUTATED PRB3 WILD-TYPE
  CLUS_1            0            185
  CLUS_2            1            154
  CLUS_3            2            136
  CLUS_4            0             95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRB3 MUTATED        1      1      1
  PRB3 WILD-TYPE    204    219    147
D161V8, multiclass
        clus
vv       PRB3 MUTATED PRB3 WILD-TYPE
  CLUS_1            1            204
  CLUS_2            1            219
  CLUS_3            1            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRB3 MUTATED        2      1      0
  PRB3 WILD-TYPE    236    190    228
D161V9, multiclass
        clus
vv       PRB3 MUTATED PRB3 WILD-TYPE
  CLUS_1            2            236
  CLUS_2            1            190
  CLUS_3            0            228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRB3 MUTATED        1      1      1
  PRB3 WILD-TYPE    195    190    269
D161V10, multiclass
        clus
vv       PRB3 MUTATED PRB3 WILD-TYPE
  CLUS_1            1            195
  CLUS_2            1            190
  CLUS_3            1            269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRB3 MUTATED        1      1      0      0
  PRB3 WILD-TYPE    139    106     83    182
D161V11, multiclass
[1] "Remove cluster labels:" "PRB3 MUTATED"          
clus
  PRB3 MUTATED PRB3 WILD-TYPE 
             2            510 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7008     TCGA-DU-7009 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A7T8     TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6     TCGA-P5-A72U 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A736 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY     TCGA-QH-A6CZ 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5     TCGA-QH-A6X8 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC     TCGA-QH-A86X 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML     TCGA-R8-A6MO 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X     TCGA-RY-A83Y 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843     TCGA-RY-A845 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU     TCGA-S9-A6TV 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY     TCGA-S9-A6TZ 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2     TCGA-S9-A6U5 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9     TCGA-S9-A6UA 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PRB3 MUTATED        0      0      2
  PRB3 WILD-TYPE    223    186    101
D161V12, multiclass
[1] "Remove cluster labels:" "PRB3 MUTATED"          
clus
  PRB3 MUTATED PRB3 WILD-TYPE 
             2            510 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A64O     TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A64S     TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A64X     TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7008     TCGA-DU-7009 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A7T8     TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6     TCGA-P5-A72U 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A736 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY     TCGA-QH-A6CZ 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5     TCGA-QH-A6X8 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC     TCGA-QH-A86X 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML     TCGA-R8-A6MO 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X     TCGA-RY-A83Y 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843     TCGA-RY-A845 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU     TCGA-S9-A6TV 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY     TCGA-S9-A6TZ 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2     TCGA-S9-A6U5 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9     TCGA-S9-A6UA 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRB3 MUTATED        1      1      0      0
  PRB3 WILD-TYPE    126    118    106    156
D161V13, multiclass
[1] "Remove cluster labels:" "PRB3 MUTATED"          
clus
  PRB3 MUTATED PRB3 WILD-TYPE 
             2            506 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET     TCGA-P5-A5EU 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F2 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6UA 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  PRB3 MUTATED        0      1      0      0      1      0
  PRB3 WILD-TYPE     99     76    120     57     62     92
D161V14, multiclass
[1] "Remove cluster labels:" "PRB3 MUTATED"          
clus
  PRB3 MUTATED PRB3 WILD-TYPE 
             2            506 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A4XH     TCGA-DB-A64L     TCGA-DB-A64O 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675     TCGA-IK-8125 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET     TCGA-P5-A5EU 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX     TCGA-P5-A5EY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1     TCGA-P5-A5F2 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6UA 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE     TCGA-S9-A6WG 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL     TCGA-S9-A6WM 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP     TCGA-S9-A6WQ 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX     TCGA-S9-A7IY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1     TCGA-S9-A7J2 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX     TCGA-S9-A7QY 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2     TCGA-S9-A7R3 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8     TCGA-S9-A89V 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4     TCGA-TM-A7C5 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B     TCGA-TM-A84C 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H     TCGA-TM-A84I 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M     TCGA-TM-A84O 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S     TCGA-TM-A84T 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH     TCGA-TQ-A7RI 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM     TCGA-TQ-A7RN 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ     TCGA-TQ-A7RR 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV     TCGA-TQ-A7RW 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9     TCGA-VM-A8CA 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE     TCGA-VM-A8CF 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M     TCGA-VW-A7QS 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K     TCGA-WY-A858 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B     TCGA-WY-A85C 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 
    TCGA-WY-A85D     TCGA-WY-A85E 
"PRB3 WILD-TYPE" "PRB3 WILD-TYPE" 

Clustering(162) Variable = FBN3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FBN3 MUTATED        2      1      5      1
  FBN3 WILD-TYPE     76     40     59     56
D162V1, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1            2             76
  CLUS_2            1             40
  CLUS_3            5             59
  CLUS_4            1             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FBN3 MUTATED        1      2      4      2
  FBN3 WILD-TYPE     62     48     44     77
D162V2, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1            1             62
  CLUS_2            2             48
  CLUS_3            4             44
  CLUS_4            2             77
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FBN3 MUTATED        3      4      2      2
  FBN3 WILD-TYPE     67     94     42     61
D162V3, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1            3             67
  CLUS_2            4             94
  CLUS_3            2             42
  CLUS_4            2             61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FBN3 MUTATED        5      3      3
  FBN3 WILD-TYPE    133     58     73
D162V4, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1            5            133
  CLUS_2            3             58
  CLUS_3            3             73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FBN3 MUTATED       13      4      1
  FBN3 WILD-TYPE    279    428     61
D162V5, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1           13            279
  CLUS_2            4            428
  CLUS_3            1             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FBN3 MUTATED        7      1      2      1
  FBN3 WILD-TYPE    146    222     86    160
D162V6, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1            7            146
  CLUS_2            1            222
  CLUS_3            2             86
  CLUS_4            1            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FBN3 MUTATED        2      4      4      2
  FBN3 WILD-TYPE    183    151    134     93
D162V7, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1            2            183
  CLUS_2            4            151
  CLUS_3            4            134
  CLUS_4            2             93
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FBN3 MUTATED        5      4      3
  FBN3 WILD-TYPE    200    216    145
D162V8, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1            5            200
  CLUS_2            4            216
  CLUS_3            3            145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FBN3 MUTATED        8      3      1
  FBN3 WILD-TYPE    230    188    227
D162V9, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1            8            230
  CLUS_2            3            188
  CLUS_3            1            227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FBN3 MUTATED        7      2      3
  FBN3 WILD-TYPE    189    189    267
D162V10, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1            7            189
  CLUS_2            2            189
  CLUS_3            3            267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FBN3 MUTATED        3      1      0      3
  FBN3 WILD-TYPE    137    106     83    179
D162V11, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1            3            137
  CLUS_2            1            106
  CLUS_3            0             83
  CLUS_4            3            179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FBN3 MUTATED        1      2      4
  FBN3 WILD-TYPE    222    184     99
D162V12, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1            1            222
  CLUS_2            2            184
  CLUS_3            4             99
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FBN3 MUTATED        2      1      0      4
  FBN3 WILD-TYPE    125    118    106    152
D162V13, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1            2            125
  CLUS_2            1            118
  CLUS_3            0            106
  CLUS_4            4            152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  FBN3 MUTATED        1      0      2      0      3      1
  FBN3 WILD-TYPE     98     77    118     57     60     91
D162V14, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1            1             98
  CLUS_2            0             77
  CLUS_3            2            118
  CLUS_4            0             57
  CLUS_5            3             60
  CLUS_6            1             91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(163) Variable = FLNB MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FLNB MUTATED        2      0      0      1
  FLNB WILD-TYPE     76     41     64     56
D163V1, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1            2             76
  CLUS_2            0             41
  CLUS_3            0             64
  CLUS_4            1             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FLNB MUTATED        2      1      0      0
  FLNB WILD-TYPE     61     49     48     79
D163V2, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1            2             61
  CLUS_2            1             49
  CLUS_3            0             48
  CLUS_4            0             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FLNB MUTATED        2      0      1      0
  FLNB WILD-TYPE     68     98     43     63
D163V3, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1            2             68
  CLUS_2            0             98
  CLUS_3            1             43
  CLUS_4            0             63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FLNB MUTATED        2      1      0
  FLNB WILD-TYPE    136     60     76
D163V4, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1            2            136
  CLUS_2            1             60
  CLUS_3            0             76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FLNB MUTATED        2      4      3
  FLNB WILD-TYPE    290    428     59
D163V5, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1            2            290
  CLUS_2            4            428
  CLUS_3            3             59
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FLNB MUTATED        1      3      1      2
  FLNB WILD-TYPE    152    220     87    159
D163V6, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1            1            152
  CLUS_2            3            220
  CLUS_3            1             87
  CLUS_4            2            159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FLNB MUTATED        2      3      1      1
  FLNB WILD-TYPE    183    152    137     94
D163V7, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1            2            183
  CLUS_2            3            152
  CLUS_3            1            137
  CLUS_4            1             94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FLNB MUTATED        2      4      1
  FLNB WILD-TYPE    203    216    147
D163V8, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1            2            203
  CLUS_2            4            216
  CLUS_3            1            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FLNB MUTATED        4      2      3
  FLNB WILD-TYPE    234    189    225
D163V9, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1            4            234
  CLUS_2            2            189
  CLUS_3            3            225
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FLNB MUTATED        3      4      2
  FLNB WILD-TYPE    193    187    268
D163V10, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1            3            193
  CLUS_2            4            187
  CLUS_3            2            268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FLNB MUTATED        2      3      0      2
  FLNB WILD-TYPE    138    104     83    180
D163V11, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1            2            138
  CLUS_2            3            104
  CLUS_3            0             83
  CLUS_4            2            180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FLNB MUTATED        3      2      2
  FLNB WILD-TYPE    220    184    101
D163V12, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1            3            220
  CLUS_2            2            184
  CLUS_3            2            101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FLNB MUTATED        3      1      0      3
  FLNB WILD-TYPE    124    118    106    153
D163V13, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1            3            124
  CLUS_2            1            118
  CLUS_3            0            106
  CLUS_4            3            153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  FLNB MUTATED        1      1      2      0      1      2
  FLNB WILD-TYPE     98     76    118     57     62     90
D163V14, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1            1             98
  CLUS_2            1             76
  CLUS_3            2            118
  CLUS_4            0             57
  CLUS_5            1             62
  CLUS_6            2             90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(164) Variable = SLFN11 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLFN11 MUTATED        1      0      0      0
  SLFN11 WILD-TYPE     77     41     64     57
D164V1, multiclass
[1] "Remove cluster labels:" "SLFN11 MUTATED"        
clus
  SLFN11 MUTATED SLFN11 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2629       TCGA-19-2631       TCGA-19-4068 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-26-5139       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-2501       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5213       TCGA-28-5214 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1991 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLFN11 MUTATED        1      0      0      0
  SLFN11 WILD-TYPE     62     50     48     79
D164V2, multiclass
[1] "Remove cluster labels:" "SLFN11 MUTATED"        
clus
  SLFN11 MUTATED SLFN11 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5858       TCGA-06-5859       TCGA-06-6389 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-6390       TCGA-06-6391       TCGA-08-0386       TCGA-12-0616 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-0618       TCGA-12-0619       TCGA-12-0688       TCGA-12-0692 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-0821       TCGA-12-1597       TCGA-12-3649       TCGA-12-3650 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-3652       TCGA-12-3653       TCGA-12-5295       TCGA-12-5299 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-5301       TCGA-14-0781       TCGA-14-0786       TCGA-14-0787 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-0789       TCGA-14-0790       TCGA-14-0813       TCGA-14-0817 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1456       TCGA-14-1823       TCGA-14-1825 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-1829       TCGA-14-2554       TCGA-14-3476       TCGA-14-4157 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-15-0742       TCGA-15-1444       TCGA-16-0846       TCGA-16-0861 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-16-1045       TCGA-16-1048       TCGA-19-1390       TCGA-19-1790 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-2619       TCGA-19-2620       TCGA-19-2623       TCGA-19-2624 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-2625       TCGA-19-2629       TCGA-19-2631       TCGA-19-4068 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5947       TCGA-19-5950       TCGA-19-5951       TCGA-19-5952 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-26-5139       TCGA-27-1830       TCGA-27-1831       TCGA-27-1832 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-1833       TCGA-27-1834       TCGA-27-1835       TCGA-27-1836 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-1837       TCGA-27-1838       TCGA-27-2518       TCGA-27-2519 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-2521       TCGA-27-2523       TCGA-27-2524       TCGA-27-2526 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-2527       TCGA-27-2528       TCGA-28-1747       TCGA-28-1753 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-2501       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5213       TCGA-28-5214 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5215       TCGA-28-5216       TCGA-28-5218       TCGA-28-5219 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5220       TCGA-28-6450       TCGA-32-1970       TCGA-32-1977 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-1979       TCGA-32-1980       TCGA-32-1982       TCGA-32-1991 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLFN11 MUTATED        0      0      0      1
  SLFN11 WILD-TYPE     70     98     44     62
D164V3, multiclass
[1] "Remove cluster labels:" "SLFN11 MUTATED"        
clus
  SLFN11 MUTATED SLFN11 WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0862 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1043       TCGA-14-1395       TCGA-14-1450 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5953 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-26-5139       TCGA-26-6173       TCGA-26-6174       TCGA-27-1830 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2502       TCGA-28-2509 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-2510       TCGA-28-2513       TCGA-28-2514       TCGA-28-5204 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5211 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLFN11 MUTATED        0      1      0
  SLFN11 WILD-TYPE    138     60     76
D164V4, multiclass
[1] "Remove cluster labels:" "SLFN11 MUTATED"        
clus
  SLFN11 MUTATED SLFN11 WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5858       TCGA-06-5859 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-6388       TCGA-06-6389       TCGA-06-6390       TCGA-06-6391 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-6693       TCGA-06-6694       TCGA-06-6695       TCGA-06-6697 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-06-6698       TCGA-06-6699       TCGA-06-6700       TCGA-06-6701 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-08-0386       TCGA-12-0616       TCGA-12-0618       TCGA-12-0619 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-0688       TCGA-12-0692       TCGA-12-0821       TCGA-12-1597 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-3649       TCGA-12-3650       TCGA-12-3652       TCGA-12-3653 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-12-5295       TCGA-12-5299       TCGA-12-5301       TCGA-14-0740 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0862 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-0871       TCGA-14-1043       TCGA-14-1395       TCGA-14-1450 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5953 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5954       TCGA-19-5955       TCGA-19-5958       TCGA-19-5959 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-19-5960       TCGA-26-1439       TCGA-26-1442       TCGA-26-5132 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-26-5133       TCGA-26-5134       TCGA-26-5135       TCGA-26-5136 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-26-5139       TCGA-26-6173       TCGA-26-6174       TCGA-27-1830 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-1831       TCGA-27-1832       TCGA-27-1833       TCGA-27-1834 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-1835       TCGA-27-1836       TCGA-27-1837       TCGA-27-1838 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-2518       TCGA-27-2519       TCGA-27-2521       TCGA-27-2523 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-27-2524       TCGA-27-2526       TCGA-27-2527       TCGA-27-2528 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-1747       TCGA-28-1753       TCGA-28-2502       TCGA-28-2509 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-2510       TCGA-28-2513       TCGA-28-2514       TCGA-28-5204 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5207       TCGA-28-5208       TCGA-28-5209       TCGA-28-5211 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5213       TCGA-28-5214       TCGA-28-5215       TCGA-28-5216 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-28-5218       TCGA-28-5219       TCGA-28-5220       TCGA-28-6450 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-1970       TCGA-32-1977       TCGA-32-1979       TCGA-32-1980 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-1982       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"SLFN11 WILD-TYPE" "SLFN11 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLFN11 MUTATED        2      4      1
  SLFN11 WILD-TYPE    290    428     61
D164V5, multiclass
        clus
vv       SLFN11 MUTATED SLFN11 WILD-TYPE
  CLUS_1              2              290
  CLUS_2              4              428
  CLUS_3              1               61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLFN11 MUTATED        1      4      0      1
  SLFN11 WILD-TYPE    152    219     88    160
D164V6, multiclass
        clus
vv       SLFN11 MUTATED SLFN11 WILD-TYPE
  CLUS_1              1              152
  CLUS_2              4              219
  CLUS_3              0               88
  CLUS_4              1              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLFN11 MUTATED        4      2      1      0
  SLFN11 WILD-TYPE    181    153    137     95
D164V7, multiclass
        clus
vv       SLFN11 MUTATED SLFN11 WILD-TYPE
  CLUS_1              4              181
  CLUS_2              2              153
  CLUS_3              1              137
  CLUS_4              0               95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLFN11 MUTATED        3      2      2
  SLFN11 WILD-TYPE    202    218    146
D164V8, multiclass
        clus
vv       SLFN11 MUTATED SLFN11 WILD-TYPE
  CLUS_1              3              202
  CLUS_2              2              218
  CLUS_3              2              146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLFN11 MUTATED        2      2      2
  SLFN11 WILD-TYPE    236    189    226
D164V9, multiclass
        clus
vv       SLFN11 MUTATED SLFN11 WILD-TYPE
  CLUS_1              2              236
  CLUS_2              2              189
  CLUS_3              2              226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLFN11 MUTATED        0      4      2
  SLFN11 WILD-TYPE    196    187    268
D164V10, multiclass
        clus
vv       SLFN11 MUTATED SLFN11 WILD-TYPE
  CLUS_1              0              196
  CLUS_2              4              187
  CLUS_3              2              268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLFN11 MUTATED        1      3      0      2
  SLFN11 WILD-TYPE    139    104     83    180
D164V11, multiclass
        clus
vv       SLFN11 MUTATED SLFN11 WILD-TYPE
  CLUS_1              1              139
  CLUS_2              3              104
  CLUS_3              0               83
  CLUS_4              2              180
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLFN11 MUTATED        4      0      2
  SLFN11 WILD-TYPE    219    186    101
D164V12, multiclass
        clus
vv       SLFN11 MUTATED SLFN11 WILD-TYPE
  CLUS_1              4              219
  CLUS_2              0              186
  CLUS_3              2              101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLFN11 MUTATED        3      1      0      2
  SLFN11 WILD-TYPE    124    118    106    154
D164V13, multiclass
        clus
vv       SLFN11 MUTATED SLFN11 WILD-TYPE
  CLUS_1              3              124
  CLUS_2              1              118
  CLUS_3              0              106
  CLUS_4              2              154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  SLFN11 MUTATED        1      1      0      1      0      3
  SLFN11 WILD-TYPE     98     76    120     56     63     89
D164V14, multiclass
        clus
vv       SLFN11 MUTATED SLFN11 WILD-TYPE
  CLUS_1              1               98
  CLUS_2              1               76
  CLUS_3              0              120
  CLUS_4              1               56
  CLUS_5              0               63
  CLUS_6              3               89
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(165) Variable = SEZ6L2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEZ6L2 MUTATED        3      0      0      1
  SEZ6L2 WILD-TYPE     75     41     64     56
D165V1, multiclass
        clus
vv       SEZ6L2 MUTATED SEZ6L2 WILD-TYPE
  CLUS_1              3               75
  CLUS_2              0               41
  CLUS_3              0               64
  CLUS_4              1               56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEZ6L2 MUTATED        1      0      0      3
  SEZ6L2 WILD-TYPE     62     50     48     76
D165V2, multiclass
        clus
vv       SEZ6L2 MUTATED SEZ6L2 WILD-TYPE
  CLUS_1              1               62
  CLUS_2              0               50
  CLUS_3              0               48
  CLUS_4              3               76
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEZ6L2 MUTATED        2      1      1      0
  SEZ6L2 WILD-TYPE     68     97     43     63
D165V3, multiclass
        clus
vv       SEZ6L2 MUTATED SEZ6L2 WILD-TYPE
  CLUS_1              2               68
  CLUS_2              1               97
  CLUS_3              1               43
  CLUS_4              0               63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SEZ6L2 MUTATED        1      0      3
  SEZ6L2 WILD-TYPE    137     61     73
D165V4, multiclass
        clus
vv       SEZ6L2 MUTATED SEZ6L2 WILD-TYPE
  CLUS_1              1              137
  CLUS_2              0               61
  CLUS_3              3               73
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SEZ6L2 MUTATED        4      3      0
  SEZ6L2 WILD-TYPE    288    429     62
D165V5, multiclass
        clus
vv       SEZ6L2 MUTATED SEZ6L2 WILD-TYPE
  CLUS_1              4              288
  CLUS_2              3              429
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEZ6L2 MUTATED        1      1      0      2
  SEZ6L2 WILD-TYPE    152    222     88    159
D165V6, multiclass
        clus
vv       SEZ6L2 MUTATED SEZ6L2 WILD-TYPE
  CLUS_1              1              152
  CLUS_2              1              222
  CLUS_3              0               88
  CLUS_4              2              159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEZ6L2 MUTATED        0      4      0      0
  SEZ6L2 WILD-TYPE    185    151    138     95
D165V7, multiclass
        clus
vv       SEZ6L2 MUTATED SEZ6L2 WILD-TYPE
  CLUS_1              0              185
  CLUS_2              4              151
  CLUS_3              0              138
  CLUS_4              0               95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SEZ6L2 MUTATED        0      0      4
  SEZ6L2 WILD-TYPE    205    220    144
D165V8, multiclass
        clus
vv       SEZ6L2 MUTATED SEZ6L2 WILD-TYPE
  CLUS_1              0              205
  CLUS_2              0              220
  CLUS_3              4              144
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SEZ6L2 MUTATED        2      3      0
  SEZ6L2 WILD-TYPE    236    188    228
D165V9, multiclass
        clus
vv       SEZ6L2 MUTATED SEZ6L2 WILD-TYPE
  CLUS_1              2              236
  CLUS_2              3              188
  CLUS_3              0              228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SEZ6L2 MUTATED        2      1      2
  SEZ6L2 WILD-TYPE    194    190    268
D165V10, multiclass
        clus
vv       SEZ6L2 MUTATED SEZ6L2 WILD-TYPE
  CLUS_1              2              194
  CLUS_2              1              190
  CLUS_3              2              268
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEZ6L2 MUTATED        0      0      0      3
  SEZ6L2 WILD-TYPE    140    107     83    179
D165V11, multiclass
        clus
vv       SEZ6L2 MUTATED SEZ6L2 WILD-TYPE
  CLUS_1              0              140
  CLUS_2              0              107
  CLUS_3              0               83
  CLUS_4              3              179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SEZ6L2 MUTATED        0      3      0
  SEZ6L2 WILD-TYPE    223    183    103
D165V12, multiclass
        clus
vv       SEZ6L2 MUTATED SEZ6L2 WILD-TYPE
  CLUS_1              0              223
  CLUS_2              3              183
  CLUS_3              0              103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEZ6L2 MUTATED        0      0      0      3
  SEZ6L2 WILD-TYPE    127    119    106    153
D165V13, multiclass
        clus
vv       SEZ6L2 MUTATED SEZ6L2 WILD-TYPE
  CLUS_1              0              127
  CLUS_2              0              119
  CLUS_3              0              106
  CLUS_4              3              153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  SEZ6L2 MUTATED        0      0      3      0      0      0
  SEZ6L2 WILD-TYPE     99     77    117     57     63     92
D165V14, multiclass
        clus
vv       SEZ6L2 MUTATED SEZ6L2 WILD-TYPE
  CLUS_1              0               99
  CLUS_2              0               77
  CLUS_3              3              117
  CLUS_4              0               57
  CLUS_5              0               63
  CLUS_6              0               92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(166) Variable = MAX MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAX MUTATED        0      0      1      0
  MAX WILD-TYPE     78     41     63     57
D166V1, multiclass
[1] "Remove cluster labels:" "MAX MUTATED"           
clus
  MAX MUTATED MAX WILD-TYPE 
            1           239 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-2470    TCGA-02-2483 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124    TCGA-06-0126 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0132    TCGA-06-0137 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157    TCGA-06-0158 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0166    TCGA-06-0167    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0744    TCGA-06-0745 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875    TCGA-06-0876 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881    TCGA-06-0882 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0939    TCGA-06-1804    TCGA-06-2557    TCGA-06-2558    TCGA-06-2559 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564    TCGA-06-2565 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408    TCGA-06-5410 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414    TCGA-06-5415 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858    TCGA-06-5859 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-6389    TCGA-06-6390    TCGA-06-6391    TCGA-08-0386    TCGA-12-0616 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692    TCGA-12-0821 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652    TCGA-12-3653 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0781    TCGA-14-0786 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813    TCGA-14-0817 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-14-0871    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825    TCGA-14-1829 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742    TCGA-15-1444 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048    TCGA-19-1390 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623    TCGA-19-2624 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068    TCGA-19-5947 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5954    TCGA-19-5955 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439    TCGA-26-1442 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135    TCGA-26-5136 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-26-5139    TCGA-27-1830    TCGA-27-1831    TCGA-27-1832    TCGA-27-1833 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-27-1834    TCGA-27-1835    TCGA-27-1836    TCGA-27-1837    TCGA-27-1838 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-27-2518    TCGA-27-2519    TCGA-27-2521    TCGA-27-2523    TCGA-27-2524 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-27-2526    TCGA-27-2527    TCGA-27-2528    TCGA-28-1747    TCGA-28-1753 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-28-2501    TCGA-28-2502    TCGA-28-2509    TCGA-28-2510    TCGA-28-2513 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-28-2514    TCGA-28-5204    TCGA-28-5207    TCGA-28-5208    TCGA-28-5209 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-28-5213    TCGA-28-5214    TCGA-28-5215    TCGA-28-5216    TCGA-28-5218 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-28-5219    TCGA-28-5220    TCGA-28-6450    TCGA-32-1970    TCGA-32-1977 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-32-1979    TCGA-32-1980    TCGA-32-1982    TCGA-32-1986    TCGA-32-1991 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-32-2491    TCGA-32-2494    TCGA-32-2495    TCGA-32-2615    TCGA-32-2632 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-32-2634    TCGA-32-2638    TCGA-32-4208    TCGA-32-4209    TCGA-32-4210 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-32-4211    TCGA-32-4213    TCGA-32-4719    TCGA-32-5222    TCGA-41-2571 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-41-2572    TCGA-41-2573    TCGA-41-2575    TCGA-41-3392    TCGA-41-3393 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-41-3915    TCGA-41-4097    TCGA-41-5651    TCGA-76-4925    TCGA-76-4926 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-76-4927    TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-76-4934    TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6285    TCGA-81-5910    TCGA-87-5896 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAX MUTATED        0      0      1      0
  MAX WILD-TYPE     63     50     47     79
D166V2, multiclass
[1] "Remove cluster labels:" "MAX MUTATED"           
clus
  MAX MUTATED MAX WILD-TYPE 
            1           239 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-2470    TCGA-02-2483 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124    TCGA-06-0126 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0132    TCGA-06-0137 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157    TCGA-06-0158 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0166    TCGA-06-0167    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0744    TCGA-06-0745 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875    TCGA-06-0876 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881    TCGA-06-0882 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0939    TCGA-06-1804    TCGA-06-2557    TCGA-06-2558    TCGA-06-2559 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564    TCGA-06-2565 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408    TCGA-06-5410 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414    TCGA-06-5415 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858    TCGA-06-5859 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-6389    TCGA-06-6390    TCGA-06-6391    TCGA-08-0386    TCGA-12-0616 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-12-0618    TCGA-12-0619    TCGA-12-0688    TCGA-12-0692    TCGA-12-0821 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-12-1597    TCGA-12-3649    TCGA-12-3650    TCGA-12-3652    TCGA-12-3653 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-12-5295    TCGA-12-5299    TCGA-12-5301    TCGA-14-0781    TCGA-14-0786 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813    TCGA-14-0817 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-14-0871    TCGA-14-1456    TCGA-14-1823    TCGA-14-1825    TCGA-14-1829 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-14-2554    TCGA-14-3476    TCGA-14-4157    TCGA-15-0742    TCGA-15-1444 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-16-0846    TCGA-16-0861    TCGA-16-1045    TCGA-16-1048    TCGA-19-1390 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-19-1790    TCGA-19-2619    TCGA-19-2620    TCGA-19-2623    TCGA-19-2624 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-19-2625    TCGA-19-2629    TCGA-19-2631    TCGA-19-4068    TCGA-19-5947 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-19-5950    TCGA-19-5951    TCGA-19-5952    TCGA-19-5954    TCGA-19-5955 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439    TCGA-26-1442 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135    TCGA-26-5136 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-26-5139    TCGA-27-1830    TCGA-27-1831    TCGA-27-1832    TCGA-27-1833 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-27-1834    TCGA-27-1835    TCGA-27-1836    TCGA-27-1837    TCGA-27-1838 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-27-2518    TCGA-27-2519    TCGA-27-2521    TCGA-27-2523    TCGA-27-2524 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-27-2526    TCGA-27-2527    TCGA-27-2528    TCGA-28-1747    TCGA-28-1753 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-28-2501    TCGA-28-2502    TCGA-28-2509    TCGA-28-2510    TCGA-28-2513 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-28-2514    TCGA-28-5204    TCGA-28-5207    TCGA-28-5208    TCGA-28-5209 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-28-5213    TCGA-28-5214    TCGA-28-5215    TCGA-28-5216    TCGA-28-5218 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-28-5219    TCGA-28-5220    TCGA-28-6450    TCGA-32-1970    TCGA-32-1977 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-32-1979    TCGA-32-1980    TCGA-32-1982    TCGA-32-1986    TCGA-32-1991 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-32-2491    TCGA-32-2494    TCGA-32-2495    TCGA-32-2615    TCGA-32-2632 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-32-2634    TCGA-32-2638    TCGA-32-4208    TCGA-32-4209    TCGA-32-4210 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-32-4211    TCGA-32-4213    TCGA-32-4719    TCGA-32-5222    TCGA-41-2571 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-41-2572    TCGA-41-2573    TCGA-41-2575    TCGA-41-3392    TCGA-41-3393 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-41-3915    TCGA-41-4097    TCGA-41-5651    TCGA-76-4925    TCGA-76-4926 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-76-4927    TCGA-76-4928    TCGA-76-4929    TCGA-76-4931    TCGA-76-4932 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-76-4934    TCGA-76-4935    TCGA-76-6191    TCGA-76-6192    TCGA-76-6193 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-76-6282    TCGA-76-6285    TCGA-81-5910    TCGA-87-5896 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAX MUTATED        0      1      0      1
  MAX WILD-TYPE     70     97     44     62
D166V3, multiclass
[1] "Remove cluster labels:" "MAX MUTATED"           
clus
  MAX MUTATED MAX WILD-TYPE 
            2           273 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-0055    TCGA-02-2470 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-02-2483    TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0126    TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0137 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0151    TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0158    TCGA-06-0166    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0744    TCGA-06-0745 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875    TCGA-06-0876 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881    TCGA-06-0882 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0939    TCGA-06-1804    TCGA-06-1806    TCGA-06-2557    TCGA-06-2558 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-5859    TCGA-06-6388    TCGA-06-6389    TCGA-06-6390    TCGA-06-6391 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-6693    TCGA-06-6694    TCGA-06-6695    TCGA-06-6697    TCGA-06-6698 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-6700    TCGA-06-6701    TCGA-08-0386    TCGA-12-0616    TCGA-12-0618 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-12-0619    TCGA-12-0688    TCGA-12-0692    TCGA-12-0821    TCGA-12-1597 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-12-3649    TCGA-12-3650    TCGA-12-3652    TCGA-12-3653    TCGA-12-5295 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-12-5299    TCGA-12-5301    TCGA-14-0740    TCGA-14-0781    TCGA-14-0786 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813    TCGA-14-0817 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-14-0862    TCGA-14-0871    TCGA-14-1043    TCGA-14-1395    TCGA-14-1450 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-14-1456    TCGA-14-1823    TCGA-14-1825    TCGA-14-1829    TCGA-14-2554 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-14-3476    TCGA-14-4157    TCGA-15-0742    TCGA-15-1444    TCGA-16-0846 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-16-0861    TCGA-16-1045    TCGA-16-1048    TCGA-19-1390    TCGA-19-1790 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-19-2619    TCGA-19-2620    TCGA-19-2623    TCGA-19-2624    TCGA-19-2625 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-19-2629    TCGA-19-2631    TCGA-19-4068    TCGA-19-5947    TCGA-19-5950 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-19-5951    TCGA-19-5952    TCGA-19-5953    TCGA-19-5954    TCGA-19-5955 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439    TCGA-26-1442 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135    TCGA-26-5136 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-26-5139    TCGA-26-6173    TCGA-26-6174    TCGA-27-1830    TCGA-27-1831 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-27-1832    TCGA-27-1833    TCGA-27-1834    TCGA-27-1835    TCGA-27-1836 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-27-1837    TCGA-27-1838    TCGA-27-2518    TCGA-27-2519    TCGA-27-2521 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-27-2523    TCGA-27-2524    TCGA-27-2526    TCGA-27-2527    TCGA-27-2528 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-28-1747    TCGA-28-1753    TCGA-28-2502    TCGA-28-2509    TCGA-28-2510 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-28-2513    TCGA-28-2514    TCGA-28-5204    TCGA-28-5207    TCGA-28-5208 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-28-5209    TCGA-28-5211    TCGA-28-5213    TCGA-28-5214    TCGA-28-5215 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-28-5216    TCGA-28-5218    TCGA-28-5219    TCGA-28-5220    TCGA-28-6450 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-32-1970    TCGA-32-1977    TCGA-32-1979    TCGA-32-1980    TCGA-32-1982 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-32-1986    TCGA-32-1991    TCGA-32-2491    TCGA-32-2494    TCGA-32-2495 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-32-2615    TCGA-32-2632    TCGA-32-2634    TCGA-32-2638    TCGA-32-4208 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-32-4209    TCGA-32-4210    TCGA-32-4211    TCGA-32-4213    TCGA-32-4719 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-32-5222    TCGA-41-2571    TCGA-41-2572    TCGA-41-2573    TCGA-41-2575 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-41-3392    TCGA-41-3393    TCGA-41-3915    TCGA-41-4097    TCGA-41-5651 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-41-6646    TCGA-74-6573    TCGA-74-6575    TCGA-74-6577    TCGA-74-6578 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-74-6584    TCGA-76-4925    TCGA-76-4926    TCGA-76-4927    TCGA-76-4928 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-76-4929    TCGA-76-4931    TCGA-76-4932    TCGA-76-4934    TCGA-76-4935 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-76-6191    TCGA-76-6192    TCGA-76-6193    TCGA-76-6280    TCGA-76-6282 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-76-6283    TCGA-76-6285    TCGA-76-6286    TCGA-76-6656    TCGA-76-6657 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-76-6660    TCGA-76-6661    TCGA-76-6662    TCGA-76-6663    TCGA-76-6664 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-81-5910    TCGA-81-5911    TCGA-87-5896 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MAX MUTATED        0      1      1
  MAX WILD-TYPE    138     60     75
D166V4, multiclass
[1] "Remove cluster labels:" "MAX MUTATED"           
clus
  MAX MUTATED MAX WILD-TYPE 
            2           273 
   TCGA-02-0003    TCGA-02-0033    TCGA-02-0047    TCGA-02-0055    TCGA-02-2470 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-02-2483    TCGA-02-2485    TCGA-02-2486    TCGA-06-0122    TCGA-06-0124 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0126    TCGA-06-0128    TCGA-06-0129    TCGA-06-0130    TCGA-06-0137 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0139    TCGA-06-0140    TCGA-06-0141    TCGA-06-0142    TCGA-06-0145 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0151    TCGA-06-0152    TCGA-06-0154    TCGA-06-0155    TCGA-06-0157 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0158    TCGA-06-0166    TCGA-06-0168    TCGA-06-0169    TCGA-06-0173 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0174    TCGA-06-0178    TCGA-06-0184    TCGA-06-0185    TCGA-06-0188 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0189    TCGA-06-0192    TCGA-06-0195    TCGA-06-0213    TCGA-06-0214 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0216    TCGA-06-0219    TCGA-06-0237    TCGA-06-0238    TCGA-06-0240 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0241    TCGA-06-0644    TCGA-06-0645    TCGA-06-0646    TCGA-06-0648 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0649    TCGA-06-0650    TCGA-06-0686    TCGA-06-0744    TCGA-06-0745 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0747    TCGA-06-0749    TCGA-06-0750    TCGA-06-0875    TCGA-06-0876 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0877    TCGA-06-0878    TCGA-06-0879    TCGA-06-0881    TCGA-06-0882 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-0939    TCGA-06-1804    TCGA-06-1806    TCGA-06-2557    TCGA-06-2558 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-2559    TCGA-06-2561    TCGA-06-2562    TCGA-06-2563    TCGA-06-2564 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-2565    TCGA-06-2567    TCGA-06-2569    TCGA-06-2570    TCGA-06-5408 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-5410    TCGA-06-5411    TCGA-06-5412    TCGA-06-5413    TCGA-06-5414 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-5415    TCGA-06-5417    TCGA-06-5418    TCGA-06-5856    TCGA-06-5858 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-5859    TCGA-06-6388    TCGA-06-6389    TCGA-06-6390    TCGA-06-6391 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-6693    TCGA-06-6694    TCGA-06-6695    TCGA-06-6697    TCGA-06-6698 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-06-6700    TCGA-06-6701    TCGA-08-0386    TCGA-12-0616    TCGA-12-0618 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-12-0619    TCGA-12-0688    TCGA-12-0692    TCGA-12-0821    TCGA-12-1597 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-12-3649    TCGA-12-3650    TCGA-12-3652    TCGA-12-3653    TCGA-12-5295 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-12-5299    TCGA-12-5301    TCGA-14-0740    TCGA-14-0781    TCGA-14-0786 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-14-0787    TCGA-14-0789    TCGA-14-0790    TCGA-14-0813    TCGA-14-0817 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-14-0862    TCGA-14-0871    TCGA-14-1043    TCGA-14-1395    TCGA-14-1450 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-14-1456    TCGA-14-1823    TCGA-14-1825    TCGA-14-1829    TCGA-14-2554 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-14-3476    TCGA-14-4157    TCGA-15-0742    TCGA-15-1444    TCGA-16-0846 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-16-0861    TCGA-16-1045    TCGA-16-1048    TCGA-19-1390    TCGA-19-1790 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-19-2619    TCGA-19-2620    TCGA-19-2623    TCGA-19-2624    TCGA-19-2625 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-19-2629    TCGA-19-2631    TCGA-19-4068    TCGA-19-5947    TCGA-19-5950 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-19-5951    TCGA-19-5952    TCGA-19-5953    TCGA-19-5954    TCGA-19-5955 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-19-5958    TCGA-19-5959    TCGA-19-5960    TCGA-26-1439    TCGA-26-1442 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-26-5132    TCGA-26-5133    TCGA-26-5134    TCGA-26-5135    TCGA-26-5136 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-26-5139    TCGA-26-6173    TCGA-26-6174    TCGA-27-1830    TCGA-27-1831 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-27-1832    TCGA-27-1833    TCGA-27-1834    TCGA-27-1835    TCGA-27-1836 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-27-1837    TCGA-27-1838    TCGA-27-2518    TCGA-27-2519    TCGA-27-2521 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-27-2523    TCGA-27-2524    TCGA-27-2526    TCGA-27-2527    TCGA-27-2528 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-28-1747    TCGA-28-1753    TCGA-28-2502    TCGA-28-2509    TCGA-28-2510 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-28-2513    TCGA-28-2514    TCGA-28-5204    TCGA-28-5207    TCGA-28-5208 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-28-5209    TCGA-28-5211    TCGA-28-5213    TCGA-28-5214    TCGA-28-5215 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-28-5216    TCGA-28-5218    TCGA-28-5219    TCGA-28-5220    TCGA-28-6450 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-32-1970    TCGA-32-1977    TCGA-32-1979    TCGA-32-1980    TCGA-32-1982 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-32-1986    TCGA-32-1991    TCGA-32-2491    TCGA-32-2494    TCGA-32-2495 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-32-2615    TCGA-32-2632    TCGA-32-2634    TCGA-32-2638    TCGA-32-4208 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-32-4209    TCGA-32-4210    TCGA-32-4211    TCGA-32-4213    TCGA-32-4719 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-32-5222    TCGA-41-2571    TCGA-41-2572    TCGA-41-2573    TCGA-41-2575 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-41-3392    TCGA-41-3393    TCGA-41-3915    TCGA-41-4097    TCGA-41-5651 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-41-6646    TCGA-74-6573    TCGA-74-6575    TCGA-74-6577    TCGA-74-6578 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-74-6584    TCGA-76-4925    TCGA-76-4926    TCGA-76-4927    TCGA-76-4928 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-76-4929    TCGA-76-4931    TCGA-76-4932    TCGA-76-4934    TCGA-76-4935 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-76-6191    TCGA-76-6192    TCGA-76-6193    TCGA-76-6280    TCGA-76-6282 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-76-6283    TCGA-76-6285    TCGA-76-6286    TCGA-76-6656    TCGA-76-6657 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-76-6660    TCGA-76-6661    TCGA-76-6662    TCGA-76-6663    TCGA-76-6664 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
   TCGA-81-5910    TCGA-81-5911    TCGA-87-5896 
"MAX WILD-TYPE" "MAX WILD-TYPE" "MAX WILD-TYPE" 
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MAX MUTATED        2      4      0
  MAX WILD-TYPE    290    428     62
D166V5, multiclass
        clus
vv       MAX MUTATED MAX WILD-TYPE
  CLUS_1           2           290
  CLUS_2           4           428
  CLUS_3           0            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAX MUTATED        1      0      1      3
  MAX WILD-TYPE    152    223     87    158
D166V6, multiclass
        clus
vv       MAX MUTATED MAX WILD-TYPE
  CLUS_1           1           152
  CLUS_2           0           223
  CLUS_3           1            87
  CLUS_4           3           158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAX MUTATED        1      3      1      0
  MAX WILD-TYPE    184    152    137     95
D166V7, multiclass
        clus
vv       MAX MUTATED MAX WILD-TYPE
  CLUS_1           1           184
  CLUS_2           3           152
  CLUS_3           1           137
  CLUS_4           0            95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MAX MUTATED        2      2      1
  MAX WILD-TYPE    203    218    147
D166V8, multiclass
        clus
vv       MAX MUTATED MAX WILD-TYPE
  CLUS_1           2           203
  CLUS_2           2           218
  CLUS_3           1           147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MAX MUTATED        1      2      2
  MAX WILD-TYPE    237    189    226
D166V9, multiclass
        clus
vv       MAX MUTATED MAX WILD-TYPE
  CLUS_1           1           237
  CLUS_2           2           189
  CLUS_3           2           226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MAX MUTATED        1      0      4
  MAX WILD-TYPE    195    191    266
D166V10, multiclass
        clus
vv       MAX MUTATED MAX WILD-TYPE
  CLUS_1           1           195
  CLUS_2           0           191
  CLUS_3           4           266
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAX MUTATED        0      0      1      3
  MAX WILD-TYPE    140    107     82    179
D166V11, multiclass
        clus
vv       MAX MUTATED MAX WILD-TYPE
  CLUS_1           0           140
  CLUS_2           0           107
  CLUS_3           1            82
  CLUS_4           3           179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MAX MUTATED        2      2      0
  MAX WILD-TYPE    221    184    103
D166V12, multiclass
        clus
vv       MAX MUTATED MAX WILD-TYPE
  CLUS_1           2           221
  CLUS_2           2           184
  CLUS_3           0           103
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAX MUTATED        0      0      2      2
  MAX WILD-TYPE    127    119    104    154
D166V13, multiclass
        clus
vv       MAX MUTATED MAX WILD-TYPE
  CLUS_1           0           127
  CLUS_2           0           119
  CLUS_3           2           104
  CLUS_4           2           154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  MAX MUTATED        0      1      2      1      0      0
  MAX WILD-TYPE     99     76    118     56     63     92
D166V14, multiclass
        clus
vv       MAX MUTATED MAX WILD-TYPE
  CLUS_1           0            99
  CLUS_2           1            76
  CLUS_3           2           118
  CLUS_4           1            56
  CLUS_5           0            63
  CLUS_6           0            92
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(167) Variable = ZNF148 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF148 MUTATED        0      1      0      0
  ZNF148 WILD-TYPE     78     40     64     57
D167V1, multiclass
[1] "Remove cluster labels:" "ZNF148 MUTATED"        
clus
  ZNF148 MUTATED ZNF148 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF148 MUTATED        0      0      0      1
  ZNF148 WILD-TYPE     63     50     48     78
D167V2, multiclass
[1] "Remove cluster labels:" "ZNF148 MUTATED"        
clus
  ZNF148 MUTATED ZNF148 WILD-TYPE 
               1              239 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-2470 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-02-2483       TCGA-02-2485       TCGA-02-2486       TCGA-06-0122 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0124       TCGA-06-0126       TCGA-06-0128       TCGA-06-0129 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0130       TCGA-06-0132       TCGA-06-0137       TCGA-06-0139 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0152       TCGA-06-0154       TCGA-06-0155       TCGA-06-0157 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0158       TCGA-06-0166       TCGA-06-0167       TCGA-06-0168 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-2557       TCGA-06-2558       TCGA-06-2559       TCGA-06-2561 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-2562       TCGA-06-2563       TCGA-06-2564       TCGA-06-2565 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-2567       TCGA-06-2569       TCGA-06-2570       TCGA-06-5408 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5410       TCGA-06-5411       TCGA-06-5412       TCGA-06-5413 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5414       TCGA-06-5415       TCGA-06-5417       TCGA-06-5418 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5856       TCGA-06-5859       TCGA-06-6389       TCGA-06-6390 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-6391       TCGA-08-0386       TCGA-12-0616       TCGA-12-0618 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-0619       TCGA-12-0688       TCGA-12-0692       TCGA-12-0821 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-1597       TCGA-12-3649       TCGA-12-3650       TCGA-12-3652 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-3653       TCGA-12-5295       TCGA-12-5299       TCGA-12-5301 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-0781       TCGA-14-0786       TCGA-14-0787       TCGA-14-0789 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-0790       TCGA-14-0813       TCGA-14-0817       TCGA-14-0871 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-1456       TCGA-14-1823       TCGA-14-1825       TCGA-14-1829 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-2554       TCGA-14-3476       TCGA-14-4157       TCGA-15-0742 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-15-1444       TCGA-16-0846       TCGA-16-0861       TCGA-16-1045 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-16-1048       TCGA-19-1390       TCGA-19-1790       TCGA-19-2619 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-2620       TCGA-19-2623       TCGA-19-2624       TCGA-19-2625 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-2629       TCGA-19-2631       TCGA-19-4068       TCGA-19-5947 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-5950       TCGA-19-5951       TCGA-19-5952       TCGA-19-5954 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-1830       TCGA-27-1831       TCGA-27-1832       TCGA-27-1833 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-1834       TCGA-27-1835       TCGA-27-1836       TCGA-27-1837 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-1838       TCGA-27-2518       TCGA-27-2519       TCGA-27-2521 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-2523       TCGA-27-2524       TCGA-27-2526       TCGA-27-2527 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-2528       TCGA-28-1747       TCGA-28-1753       TCGA-28-2501 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-2502       TCGA-28-2509       TCGA-28-2510       TCGA-28-2513 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-2514       TCGA-28-5204       TCGA-28-5207       TCGA-28-5208 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-5209       TCGA-28-5213       TCGA-28-5214       TCGA-28-5215 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-5216       TCGA-28-5218       TCGA-28-5219       TCGA-28-5220 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-6450       TCGA-32-1970       TCGA-32-1977       TCGA-32-1979 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-1980       TCGA-32-1982       TCGA-32-1986       TCGA-32-1991 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-2491       TCGA-32-2494       TCGA-32-2495       TCGA-32-2615 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-2632       TCGA-32-2634       TCGA-32-2638       TCGA-32-4208 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-4209       TCGA-32-4210       TCGA-32-4211       TCGA-32-4213 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-4719       TCGA-32-5222       TCGA-41-2571       TCGA-41-2572 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-41-2573       TCGA-41-2575       TCGA-41-3392       TCGA-41-3393 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-41-3915       TCGA-41-4097       TCGA-41-5651       TCGA-76-4925 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6282 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6285       TCGA-81-5910       TCGA-87-5896 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF148 MUTATED        1      0      0      0
  ZNF148 WILD-TYPE     69     98     44     63
D167V3, multiclass
[1] "Remove cluster labels:" "ZNF148 MUTATED"        
clus
  ZNF148 MUTATED ZNF148 WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5859       TCGA-06-6388 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF148 MUTATED        0      0      1
  ZNF148 WILD-TYPE    138     61     75
D167V4, multiclass
[1] "Remove cluster labels:" "ZNF148 MUTATED"        
clus
  ZNF148 MUTATED ZNF148 WILD-TYPE 
               1              274 
      TCGA-02-0003       TCGA-02-0033       TCGA-02-0047       TCGA-02-0055 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-02-2470       TCGA-02-2483       TCGA-02-2485       TCGA-02-2486 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0122       TCGA-06-0124       TCGA-06-0126       TCGA-06-0128 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0129       TCGA-06-0130       TCGA-06-0137       TCGA-06-0139 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0140       TCGA-06-0141       TCGA-06-0142       TCGA-06-0145 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0151       TCGA-06-0152       TCGA-06-0154       TCGA-06-0155 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0157       TCGA-06-0158       TCGA-06-0166       TCGA-06-0168 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0169       TCGA-06-0173       TCGA-06-0174       TCGA-06-0178 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0184       TCGA-06-0185       TCGA-06-0188       TCGA-06-0189 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0192       TCGA-06-0195       TCGA-06-0213       TCGA-06-0214 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0216       TCGA-06-0219       TCGA-06-0237       TCGA-06-0238 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0240       TCGA-06-0241       TCGA-06-0644       TCGA-06-0645 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0646       TCGA-06-0648       TCGA-06-0649       TCGA-06-0650 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0686       TCGA-06-0743       TCGA-06-0744       TCGA-06-0745 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0747       TCGA-06-0749       TCGA-06-0750       TCGA-06-0875 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0876       TCGA-06-0877       TCGA-06-0878       TCGA-06-0879 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-0881       TCGA-06-0882       TCGA-06-0939       TCGA-06-1804 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-1806       TCGA-06-2557       TCGA-06-2558       TCGA-06-2559 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-2561       TCGA-06-2562       TCGA-06-2563       TCGA-06-2564 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-2565       TCGA-06-2567       TCGA-06-2569       TCGA-06-2570 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5408       TCGA-06-5410       TCGA-06-5411       TCGA-06-5412 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5413       TCGA-06-5414       TCGA-06-5415       TCGA-06-5417 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-5418       TCGA-06-5856       TCGA-06-5859       TCGA-06-6388 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-6389       TCGA-06-6390       TCGA-06-6391       TCGA-06-6693 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-6694       TCGA-06-6695       TCGA-06-6697       TCGA-06-6698 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-06-6699       TCGA-06-6700       TCGA-06-6701       TCGA-08-0386 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-0616       TCGA-12-0618       TCGA-12-0619       TCGA-12-0688 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-0692       TCGA-12-0821       TCGA-12-1597       TCGA-12-3649 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-3650       TCGA-12-3652       TCGA-12-3653       TCGA-12-5295 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-12-5299       TCGA-12-5301       TCGA-14-0740       TCGA-14-0781 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-0786       TCGA-14-0787       TCGA-14-0789       TCGA-14-0790 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-0813       TCGA-14-0817       TCGA-14-0862       TCGA-14-0871 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-1043       TCGA-14-1395       TCGA-14-1450       TCGA-14-1456 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-1823       TCGA-14-1825       TCGA-14-1829       TCGA-14-2554 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-14-3476       TCGA-14-4157       TCGA-15-0742       TCGA-15-1444 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-16-0846       TCGA-16-0861       TCGA-16-1045       TCGA-16-1048 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-1390       TCGA-19-1790       TCGA-19-2619       TCGA-19-2620 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-2623       TCGA-19-2624       TCGA-19-2625       TCGA-19-2629 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-2631       TCGA-19-4068       TCGA-19-5947       TCGA-19-5950 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-5951       TCGA-19-5952       TCGA-19-5953       TCGA-19-5954 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-19-5955       TCGA-19-5958       TCGA-19-5959       TCGA-19-5960 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-26-1439       TCGA-26-1442       TCGA-26-5132       TCGA-26-5133 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-26-5134       TCGA-26-5135       TCGA-26-5136       TCGA-26-5139 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-26-6173       TCGA-26-6174       TCGA-27-1830       TCGA-27-1831 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-1832       TCGA-27-1833       TCGA-27-1834       TCGA-27-1835 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-1836       TCGA-27-1837       TCGA-27-1838       TCGA-27-2518 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-2519       TCGA-27-2521       TCGA-27-2523       TCGA-27-2524 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-27-2526       TCGA-27-2527       TCGA-27-2528       TCGA-28-1747 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-1753       TCGA-28-2502       TCGA-28-2509       TCGA-28-2510 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-2513       TCGA-28-2514       TCGA-28-5204       TCGA-28-5207 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-5208       TCGA-28-5209       TCGA-28-5211       TCGA-28-5213 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-5214       TCGA-28-5215       TCGA-28-5216       TCGA-28-5218 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-28-5219       TCGA-28-5220       TCGA-28-6450       TCGA-32-1970 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-1977       TCGA-32-1979       TCGA-32-1980       TCGA-32-1982 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-1986       TCGA-32-1991       TCGA-32-2491       TCGA-32-2494 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-2495       TCGA-32-2615       TCGA-32-2632       TCGA-32-2634 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-2638       TCGA-32-4208       TCGA-32-4209       TCGA-32-4210 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-32-4211       TCGA-32-4213       TCGA-32-4719       TCGA-32-5222 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-41-2571       TCGA-41-2572       TCGA-41-2573       TCGA-41-2575 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-41-3392       TCGA-41-3393       TCGA-41-3915       TCGA-41-4097 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-41-5651       TCGA-41-6646       TCGA-74-6573       TCGA-74-6575 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-74-6577       TCGA-74-6578       TCGA-74-6584       TCGA-76-4925 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-4926       TCGA-76-4927       TCGA-76-4928       TCGA-76-4929 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-4931       TCGA-76-4932       TCGA-76-4934       TCGA-76-4935 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6191       TCGA-76-6192       TCGA-76-6193       TCGA-76-6280 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6282       TCGA-76-6283       TCGA-76-6285       TCGA-76-6286 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6656       TCGA-76-6657       TCGA-76-6660       TCGA-76-6661 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-76-6662       TCGA-76-6663       TCGA-76-6664       TCGA-81-5910 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
      TCGA-81-5911       TCGA-87-5896 
"ZNF148 WILD-TYPE" "ZNF148 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF148 MUTATED        2      3      0
  ZNF148 WILD-TYPE    290    429     62
D167V5, multiclass
        clus
vv       ZNF148 MUTATED ZNF148 WILD-TYPE
  CLUS_1              2              290
  CLUS_2              3              429
  CLUS_3              0               62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF148 MUTATED        2      0      0      3
  ZNF148 WILD-TYPE    151    223     88    158
D167V6, multiclass
        clus
vv       ZNF148 MUTATED ZNF148 WILD-TYPE
  CLUS_1              2              151
  CLUS_2              0              223
  CLUS_3              0               88
  CLUS_4              3              158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF148 MUTATED        2      0      2      0
  ZNF148 WILD-TYPE    183    155    136     95
D167V7, multiclass
        clus
vv       ZNF148 MUTATED ZNF148 WILD-TYPE
  CLUS_1              2              183
  CLUS_2              0              155
  CLUS_3              2              136
  CLUS_4              0               95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF148 MUTATED        3      0      1
  ZNF148 WILD-TYPE    202    220    147
D167V8, multiclass
        clus
vv       ZNF148 MUTATED ZNF148 WILD-TYPE
  CLUS_1              3              202
  CLUS_2              0              220
  CLUS_3              1              147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF148 MUTATED        2      1      2
  ZNF148 WILD-TYPE    236    190    226
D167V9, multiclass
        clus
vv       ZNF148 MUTATED ZNF148 WILD-TYPE
  CLUS_1              2              236
  CLUS_2              1              190
  CLUS_3              2              226
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF148 MUTATED        1      1      3
  ZNF148 WILD-TYPE    195    190    267
D167V10, multiclass
        clus
vv       ZNF148 MUTATED ZNF148 WILD-TYPE
  CLUS_1              1              195
  CLUS_2              1              190
  CLUS_3              3              267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF148 MUTATED        1      2      0      1
  ZNF148 WILD-TYPE    139    105     83    181
D167V11, multiclass
        clus
vv       ZNF148 MUTATED ZNF148 WILD-TYPE
  CLUS_1              1              139
  CLUS_2              2              105
  CLUS_3              0               83
  CLUS_4              1              181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF148 MUTATED        3      0      1
  ZNF148 WILD-TYPE    220    186    102
D167V12, multiclass
        clus
vv       ZNF148 MUTATED ZNF148 WILD-TYPE
  CLUS_1              3              220
  CLUS_2              0              186
  CLUS_3              1              102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF148 MUTATED        1      0      1      2
  ZNF148 WILD-TYPE    126    119    105    154
D167V13, multiclass
        clus
vv       ZNF148 MUTATED ZNF148 WILD-TYPE
  CLUS_1              1              126
  CLUS_2              0              119
  CLUS_3              1              105
  CLUS_4              2              154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  ZNF148 MUTATED        0      0      0      2      0      2
  ZNF148 WILD-TYPE     99     77    120     55     63     90
D167V14, multiclass
        clus
vv       ZNF148 MUTATED ZNF148 WILD-TYPE
  CLUS_1              0               99
  CLUS_2              0               77
  CLUS_3              0              120
  CLUS_4              2               55
  CLUS_5              0               63
  CLUS_6              2               90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(168) Variable = PAN3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAN3 MUTATED        3      0      1      1
  PAN3 WILD-TYPE     75     41     63     56
D168V1, multiclass
        clus
vv       PAN3 MUTATED PAN3 WILD-TYPE
  CLUS_1            3             75
  CLUS_2            0             41
  CLUS_3            1             63
  CLUS_4            1             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAN3 MUTATED        2      2      1      0
  PAN3 WILD-TYPE     61     48     47     79
D168V2, multiclass
        clus
vv       PAN3 MUTATED PAN3 WILD-TYPE
  CLUS_1            2             61
  CLUS_2            2             48
  CLUS_3            1             47
  CLUS_4            0             79
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAN3 MUTATED        3      3      0      0
  PAN3 WILD-TYPE     67     95     44     63
D168V3, multiclass
        clus
vv       PAN3 MUTATED PAN3 WILD-TYPE
  CLUS_1            3             67
  CLUS_2            3             95
  CLUS_3            0             44
  CLUS_4            0             63
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAN3 MUTATED        2      2      2
  PAN3 WILD-TYPE    136     59     74
D168V4, multiclass
        clus
vv       PAN3 MUTATED PAN3 WILD-TYPE
  CLUS_1            2            136
  CLUS_2            2             59
  CLUS_3            2             74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAN3 MUTATED        4      2      1
  PAN3 WILD-TYPE    288    430     61
D168V5, multiclass
        clus
vv       PAN3 MUTATED PAN3 WILD-TYPE
  CLUS_1            4            288
  CLUS_2            2            430
  CLUS_3            1             61
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAN3 MUTATED        1      0      0      1
  PAN3 WILD-TYPE    152    223     88    160
D168V6, multiclass
[1] "Remove cluster labels:" "PAN3 MUTATED"          
clus
  PAN3 MUTATED PAN3 WILD-TYPE 
             2            623 
    TCGA-06-0152     TCGA-06-0650     TCGA-06-1804     TCGA-06-1806 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-06-5408     TCGA-06-5410     TCGA-06-5411     TCGA-06-5412 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-06-5413     TCGA-06-5414     TCGA-06-5415     TCGA-06-5417 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-06-5418     TCGA-06-5856     TCGA-06-5858     TCGA-06-5859 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-06-6388     TCGA-06-6389     TCGA-06-6390     TCGA-06-6391 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-06-6693     TCGA-06-6694     TCGA-06-6695     TCGA-06-6697 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-06-6698     TCGA-06-6699     TCGA-06-6700     TCGA-06-6701 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-12-5295     TCGA-12-5299     TCGA-12-5301     TCGA-14-0740 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-14-0781     TCGA-14-0862     TCGA-14-1043     TCGA-14-1395 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-14-1450     TCGA-15-1444     TCGA-19-5947     TCGA-19-5950 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-19-5951     TCGA-19-5952     TCGA-19-5953     TCGA-19-5954 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-19-5955     TCGA-19-5958     TCGA-19-5959     TCGA-19-5960 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-26-1442     TCGA-26-5132     TCGA-26-5133     TCGA-26-5134 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-26-5135     TCGA-26-5136     TCGA-26-5139     TCGA-26-6173 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-26-6174     TCGA-28-2501     TCGA-28-2510     TCGA-28-5204 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-28-5207     TCGA-28-5208     TCGA-28-5209     TCGA-28-5211 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-28-5213     TCGA-28-5214     TCGA-28-5215     TCGA-28-5216 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-28-5218     TCGA-28-5219     TCGA-28-5220     TCGA-28-6450 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-32-1979     TCGA-32-1980     TCGA-32-5222     TCGA-41-5651 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-41-6646     TCGA-74-6573     TCGA-74-6577     TCGA-74-6578 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-74-6584     TCGA-76-4925     TCGA-76-4926     TCGA-76-4927 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-76-4928     TCGA-76-4929     TCGA-76-4931     TCGA-76-4932 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-76-4934     TCGA-76-4935     TCGA-76-6191     TCGA-76-6192 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-76-6193     TCGA-76-6280     TCGA-76-6282     TCGA-76-6283 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-76-6285     TCGA-76-6286     TCGA-76-6656     TCGA-76-6657 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-76-6660     TCGA-76-6661     TCGA-76-6662     TCGA-76-6663 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-76-6664     TCGA-81-5910     TCGA-81-5911     TCGA-87-5896 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A64L     TCGA-DB-A64O 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75M     TCGA-DB-A75O 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A75P     TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-5143     TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A66D     TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A7US     TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5847     TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5853     TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5871     TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6393     TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6397     TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6402     TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6406     TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6542     TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7009     TCGA-DU-7010     TCGA-DU-7011     TCGA-DU-7012 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015     TCGA-DU-7018 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292     TCGA-DU-7294 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300     TCGA-DU-7301 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306     TCGA-DU-7309 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162     TCGA-DU-8163 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166     TCGA-DU-8167 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR     TCGA-DU-A5TS 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW     TCGA-DU-A5TY 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6     TCGA-DU-A6S7 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L     TCGA-DU-A76O 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8     TCGA-DU-A7TA 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD     TCGA-DU-A7TG 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302     TCGA-E1-5303 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307     TCGA-E1-5311 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322     TCGA-E1-A7YD 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI     TCGA-E1-A7YJ 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM     TCGA-E1-A7YN 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS     TCGA-E1-A7YU 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY     TCGA-E1-A7Z2 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6     TCGA-EZ-7264 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962     TCGA-FG-5963 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688     TCGA-FG-6689 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692     TCGA-FG-7634 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638     TCGA-FG-7641 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182     TCGA-FG-8185 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188     TCGA-FG-8189 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU     TCGA-FG-A4MW 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J     TCGA-FG-A60K 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1     TCGA-FG-A6J3 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710     TCGA-FG-A711 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q     TCGA-FN-7833 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469     TCGA-HT-7470 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473     TCGA-HT-7474 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477     TCGA-HT-7478 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481     TCGA-HT-7482 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601     TCGA-HT-7602 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605     TCGA-HT-7606 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609     TCGA-HT-7610 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620     TCGA-HT-7676 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681     TCGA-HT-7684 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688     TCGA-HT-7689 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692     TCGA-HT-7693 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854     TCGA-HT-7855 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858     TCGA-HT-7860 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875     TCGA-HT-7877 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881     TCGA-HT-7882 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010     TCGA-HT-8011 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015     TCGA-HT-8018 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105     TCGA-HT-8106 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109     TCGA-HT-8110 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114     TCGA-HT-8558 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS     TCGA-HT-A4DV 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9     TCGA-HT-A5RA 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614     TCGA-HT-A615 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618     TCGA-HT-A619 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C     TCGA-HT-A74H 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A74J     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6     TCGA-P5-A72U 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A736 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X     TCGA-P5-A780 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S     TCGA-QH-A65V 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS     TCGA-QH-A6CU 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6CV     TCGA-QH-A6CW     TCGA-QH-A6CX     TCGA-QH-A6CY 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAN3 MUTATED        2      0      0      1
  PAN3 WILD-TYPE    183    155    138     94
D168V7, multiclass
        clus
vv       PAN3 MUTATED PAN3 WILD-TYPE
  CLUS_1            2            183
  CLUS_2            0            155
  CLUS_3            0            138
  CLUS_4            1             94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAN3 MUTATED        2      0      1
  PAN3 WILD-TYPE    203    220    147
D168V8, multiclass
        clus
vv       PAN3 MUTATED PAN3 WILD-TYPE
  CLUS_1            2            203
  CLUS_2            0            220
  CLUS_3            1            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAN3 MUTATED        2      1      0
  PAN3 WILD-TYPE    236    190    228
D168V9, multiclass
        clus
vv       PAN3 MUTATED PAN3 WILD-TYPE
  CLUS_1            2            236
  CLUS_2            1            190
  CLUS_3            0            228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAN3 MUTATED        2      0      1
  PAN3 WILD-TYPE    194    191    269
D168V10, multiclass
        clus
vv       PAN3 MUTATED PAN3 WILD-TYPE
  CLUS_1            2            194
  CLUS_2            0            191
  CLUS_3            1            269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAN3 MUTATED        0      0      0      1
  PAN3 WILD-TYPE    140    107     83    181
D168V11, multiclass
[1] "Remove cluster labels:" "PAN3 MUTATED"          
clus
  PAN3 MUTATED PAN3 WILD-TYPE 
             1            511 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A64L     TCGA-DB-A64O 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A7T8     TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAN3 MUTATED        0      1      0
  PAN3 WILD-TYPE    223    185    103
D168V12, multiclass
[1] "Remove cluster labels:" "PAN3 MUTATED"          
clus
  PAN3 MUTATED PAN3 WILD-TYPE 
             1            511 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5280     TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A4XB     TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A4XF     TCGA-DB-A4XG     TCGA-DB-A64L     TCGA-DB-A64O 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A64P     TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A64U     TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A75K     TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-5140     TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-5144     TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A66F     TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A7UT     TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5849     TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5854     TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5872     TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6394     TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6399     TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6403     TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6407     TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7006     TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7010     TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7015     TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7292     TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7300     TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7306     TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8162     TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8166     TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A5TR     TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A5TW     TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A6S6     TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A76L     TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A7T8     TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A7TD     TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5302     TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5307     TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5322     TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YI     TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YM     TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YS     TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YY     TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7Z6     TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-5962     TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-6688     TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-6692     TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-7638     TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-8182     TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-8188     TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A4MU     TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A60J     TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A6J1     TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A710     TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A87Q     TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7469     TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7473     TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7477     TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7481     TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7601     TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7605     TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7609     TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7620     TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7681     TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7688     TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7692     TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7854     TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7858     TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7875     TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7881     TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8010     TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8015     TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8105     TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8109     TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8114     TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A4DS     TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A5R9     TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A614     TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A618     TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A61C     TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A74O     TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-7490     TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-8319     TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-A5KJ     TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-IK-7675     TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5ET     TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5EX     TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5F1     TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A5F6 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A72U     TCGA-P5-A72W     TCGA-P5-A72X     TCGA-P5-A72Z 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A730     TCGA-P5-A731     TCGA-P5-A733     TCGA-P5-A735 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A736     TCGA-P5-A737     TCGA-P5-A77W     TCGA-P5-A77X 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R     TCGA-QH-A65S 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z     TCGA-QH-A6CS 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX     TCGA-QH-A6CY 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4     TCGA-QH-A6X5 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA     TCGA-QH-A6XC 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK     TCGA-R8-A6ML 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M     TCGA-RY-A83X 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840     TCGA-RY-A843 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS     TCGA-S9-A6TU 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX     TCGA-S9-A6TY 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1     TCGA-S9-A6U2 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8     TCGA-S9-A6U9 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAN3 MUTATED        0      0      0      1
  PAN3 WILD-TYPE    127    119    106    155
D168V13, multiclass
[1] "Remove cluster labels:" "PAN3 MUTATED"          
clus
  PAN3 MUTATED PAN3 WILD-TYPE 
             1            507 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A64L     TCGA-DB-A64O     TCGA-DB-A64P 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S     TCGA-DB-A64U 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X     TCGA-DB-A75K 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393     TCGA-DU-6394 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  PAN3 MUTATED        0      0      1      0      0      0
  PAN3 WILD-TYPE     99     77    119     57     63     92
D168V14, multiclass
[1] "Remove cluster labels:" "PAN3 MUTATED"          
clus
  PAN3 MUTATED PAN3 WILD-TYPE 
             1            507 
    TCGA-CS-4938     TCGA-CS-4941     TCGA-CS-4942     TCGA-CS-4943 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-4944     TCGA-CS-5390     TCGA-CS-5393     TCGA-CS-5394 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-5395     TCGA-CS-5396     TCGA-CS-5397     TCGA-CS-6186 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-6188     TCGA-CS-6290     TCGA-CS-6665     TCGA-CS-6666 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-CS-6667     TCGA-CS-6668     TCGA-CS-6669     TCGA-CS-6670 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5270     TCGA-DB-5273     TCGA-DB-5274     TCGA-DB-5275 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5276     TCGA-DB-5277     TCGA-DB-5278     TCGA-DB-5279 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-5281     TCGA-DB-A4X9     TCGA-DB-A4XA     TCGA-DB-A4XB 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A4XC     TCGA-DB-A4XD     TCGA-DB-A4XE     TCGA-DB-A4XF 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A4XG     TCGA-DB-A64L     TCGA-DB-A64O     TCGA-DB-A64P 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A64Q     TCGA-DB-A64R     TCGA-DB-A64S     TCGA-DB-A64U 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A64V     TCGA-DB-A64W     TCGA-DB-A64X     TCGA-DB-A75K 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DB-A75L     TCGA-DB-A75O     TCGA-DB-A75P     TCGA-DH-5140 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-5141     TCGA-DH-5142     TCGA-DH-5143     TCGA-DH-5144 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A669     TCGA-DH-A66B     TCGA-DH-A66D     TCGA-DH-A66F 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A66G     TCGA-DH-A7UR     TCGA-DH-A7US     TCGA-DH-A7UT 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DH-A7UU     TCGA-DH-A7UV     TCGA-DU-5847     TCGA-DU-5849 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5851     TCGA-DU-5852     TCGA-DU-5853     TCGA-DU-5854 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5855     TCGA-DU-5870     TCGA-DU-5871     TCGA-DU-5872 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-5874     TCGA-DU-6392     TCGA-DU-6393     TCGA-DU-6394 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6395     TCGA-DU-6396     TCGA-DU-6397     TCGA-DU-6399 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6400     TCGA-DU-6401     TCGA-DU-6402     TCGA-DU-6403 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6404     TCGA-DU-6405     TCGA-DU-6406     TCGA-DU-6407 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-6408     TCGA-DU-6410     TCGA-DU-6542     TCGA-DU-7006 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7007     TCGA-DU-7008     TCGA-DU-7009     TCGA-DU-7010 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7012     TCGA-DU-7013     TCGA-DU-7014     TCGA-DU-7015 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7018     TCGA-DU-7019     TCGA-DU-7290     TCGA-DU-7292 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7294     TCGA-DU-7298     TCGA-DU-7299     TCGA-DU-7300 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7301     TCGA-DU-7302     TCGA-DU-7304     TCGA-DU-7306 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-7309     TCGA-DU-8158     TCGA-DU-8161     TCGA-DU-8162 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8163     TCGA-DU-8164     TCGA-DU-8165     TCGA-DU-8166 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-8167     TCGA-DU-8168     TCGA-DU-A5TP     TCGA-DU-A5TR 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A5TS     TCGA-DU-A5TT     TCGA-DU-A5TU     TCGA-DU-A5TW 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A5TY     TCGA-DU-A6S2     TCGA-DU-A6S3     TCGA-DU-A6S6 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A6S7     TCGA-DU-A6S8     TCGA-DU-A76K     TCGA-DU-A76L 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A76O     TCGA-DU-A76R     TCGA-DU-A7T6     TCGA-DU-A7T8 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A7TA     TCGA-DU-A7TB     TCGA-DU-A7TC     TCGA-DU-A7TD 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-DU-A7TG     TCGA-DU-A7TI     TCGA-DU-A7TJ     TCGA-E1-5302 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5303     TCGA-E1-5304     TCGA-E1-5305     TCGA-E1-5307 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-5311     TCGA-E1-5318     TCGA-E1-5319     TCGA-E1-5322 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YD     TCGA-E1-A7YE     TCGA-E1-A7YH     TCGA-E1-A7YI 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YJ     TCGA-E1-A7YK     TCGA-E1-A7YL     TCGA-E1-A7YM 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YN     TCGA-E1-A7YO     TCGA-E1-A7YQ     TCGA-E1-A7YS 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7YU     TCGA-E1-A7YV     TCGA-E1-A7YW     TCGA-E1-A7YY 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-E1-A7Z2     TCGA-E1-A7Z3     TCGA-E1-A7Z4     TCGA-E1-A7Z6 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-EZ-7264     TCGA-F6-A8O3     TCGA-F6-A8O4     TCGA-FG-5962 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-5963     TCGA-FG-5964     TCGA-FG-5965     TCGA-FG-6688 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-6689     TCGA-FG-6690     TCGA-FG-6691     TCGA-FG-6692 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-7634     TCGA-FG-7636     TCGA-FG-7637     TCGA-FG-7638 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-7641     TCGA-FG-7643     TCGA-FG-8181     TCGA-FG-8182 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-8185     TCGA-FG-8186     TCGA-FG-8187     TCGA-FG-8188 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-8189     TCGA-FG-8191     TCGA-FG-A4MT     TCGA-FG-A4MU 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A4MW     TCGA-FG-A4MX     TCGA-FG-A4MY     TCGA-FG-A60J 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A60K     TCGA-FG-A60L     TCGA-FG-A6IZ     TCGA-FG-A6J1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A6J3     TCGA-FG-A70Y     TCGA-FG-A70Z     TCGA-FG-A710 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FG-A711     TCGA-FG-A713     TCGA-FG-A87N     TCGA-FG-A87Q 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-FN-7833     TCGA-HT-7467     TCGA-HT-7468     TCGA-HT-7469 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7470     TCGA-HT-7471     TCGA-HT-7472     TCGA-HT-7473 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7474     TCGA-HT-7475     TCGA-HT-7476     TCGA-HT-7477 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7478     TCGA-HT-7479     TCGA-HT-7480     TCGA-HT-7481 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7482     TCGA-HT-7483     TCGA-HT-7485     TCGA-HT-7601 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7602     TCGA-HT-7603     TCGA-HT-7604     TCGA-HT-7605 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7606     TCGA-HT-7607     TCGA-HT-7608     TCGA-HT-7609 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7610     TCGA-HT-7611     TCGA-HT-7616     TCGA-HT-7620 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7676     TCGA-HT-7677     TCGA-HT-7680     TCGA-HT-7681 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7684     TCGA-HT-7686     TCGA-HT-7687     TCGA-HT-7688 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7689     TCGA-HT-7690     TCGA-HT-7691     TCGA-HT-7692 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7693     TCGA-HT-7694     TCGA-HT-7695     TCGA-HT-7854 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7855     TCGA-HT-7856     TCGA-HT-7857     TCGA-HT-7858 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7860     TCGA-HT-7873     TCGA-HT-7874     TCGA-HT-7875 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7877     TCGA-HT-7879     TCGA-HT-7880     TCGA-HT-7881 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-7882     TCGA-HT-7884     TCGA-HT-7902     TCGA-HT-8010 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8011     TCGA-HT-8012     TCGA-HT-8013     TCGA-HT-8015 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8018     TCGA-HT-8019     TCGA-HT-8104     TCGA-HT-8105 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8106     TCGA-HT-8107     TCGA-HT-8108     TCGA-HT-8109 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8110     TCGA-HT-8111     TCGA-HT-8113     TCGA-HT-8114 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-8558     TCGA-HT-8563     TCGA-HT-8564     TCGA-HT-A4DS 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A4DV     TCGA-HT-A5R5     TCGA-HT-A5R7     TCGA-HT-A5R9 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A5RA     TCGA-HT-A5RB     TCGA-HT-A5RC     TCGA-HT-A614 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A615     TCGA-HT-A616     TCGA-HT-A617     TCGA-HT-A618 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A619     TCGA-HT-A61A     TCGA-HT-A61B     TCGA-HT-A61C 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HT-A74H     TCGA-HT-A74K     TCGA-HT-A74L     TCGA-HT-A74O 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-7486     TCGA-HW-7487     TCGA-HW-7489     TCGA-HW-7490 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-7491     TCGA-HW-7493     TCGA-HW-7495     TCGA-HW-8319 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-8320     TCGA-HW-8321     TCGA-HW-8322     TCGA-HW-A5KJ 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-HW-A5KK     TCGA-HW-A5KL     TCGA-HW-A5KM     TCGA-IK-7675 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-IK-8125     TCGA-KT-A74X     TCGA-KT-A7W1     TCGA-P5-A5ET 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5EU     TCGA-P5-A5EV     TCGA-P5-A5EW     TCGA-P5-A5EX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5EY     TCGA-P5-A5EZ     TCGA-P5-A5F0     TCGA-P5-A5F1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A5F2     TCGA-P5-A5F4     TCGA-P5-A72U     TCGA-P5-A72W 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A72X     TCGA-P5-A72Z     TCGA-P5-A730     TCGA-P5-A731 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A733     TCGA-P5-A735     TCGA-P5-A737     TCGA-P5-A77W 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-P5-A77X     TCGA-P5-A780     TCGA-P5-A781     TCGA-QH-A65R 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A65S     TCGA-QH-A65V     TCGA-QH-A65X     TCGA-QH-A65Z 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6CS     TCGA-QH-A6CU     TCGA-QH-A6CV     TCGA-QH-A6CX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6CY     TCGA-QH-A6CZ     TCGA-QH-A6X3     TCGA-QH-A6X4 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6X5     TCGA-QH-A6X8     TCGA-QH-A6X9     TCGA-QH-A6XA 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-QH-A6XC     TCGA-QH-A86X     TCGA-QH-A870     TCGA-R8-A6MK 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-R8-A6ML     TCGA-R8-A6MO     TCGA-R8-A6YH     TCGA-R8-A73M 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-RY-A83X     TCGA-RY-A83Y     TCGA-RY-A83Z     TCGA-RY-A840 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-RY-A843     TCGA-RY-A845     TCGA-RY-A847     TCGA-S9-A6TS 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6TU     TCGA-S9-A6TV     TCGA-S9-A6TW     TCGA-S9-A6TX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6TY     TCGA-S9-A6TZ     TCGA-S9-A6U0     TCGA-S9-A6U1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6U2     TCGA-S9-A6U5     TCGA-S9-A6U6     TCGA-S9-A6U8 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6UA     TCGA-S9-A6UB     TCGA-S9-A6WD     TCGA-S9-A6WE 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WG     TCGA-S9-A6WH     TCGA-S9-A6WI     TCGA-S9-A6WL 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WM     TCGA-S9-A6WN     TCGA-S9-A6WO     TCGA-S9-A6WP 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A6WQ     TCGA-S9-A7IQ     TCGA-S9-A7IS     TCGA-S9-A7IX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7IY     TCGA-S9-A7IZ     TCGA-S9-A7J0     TCGA-S9-A7J1 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7J2     TCGA-S9-A7J3     TCGA-S9-A7QW     TCGA-S9-A7QX 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7QY     TCGA-S9-A7QZ     TCGA-S9-A7R1     TCGA-S9-A7R2 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A7R3     TCGA-S9-A7R4     TCGA-S9-A7R7     TCGA-S9-A7R8 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-S9-A89V     TCGA-S9-A89Z     TCGA-TM-A7C3     TCGA-TM-A7C4 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A7C5     TCGA-TM-A7CA     TCGA-TM-A7CF     TCGA-TM-A84B 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84C     TCGA-TM-A84F     TCGA-TM-A84G     TCGA-TM-A84H 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84I     TCGA-TM-A84J     TCGA-TM-A84L     TCGA-TM-A84M 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84O     TCGA-TM-A84Q     TCGA-TM-A84R     TCGA-TM-A84S 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TM-A84T     TCGA-TQ-A7RF     TCGA-TQ-A7RG     TCGA-TQ-A7RH 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RI     TCGA-TQ-A7RJ     TCGA-TQ-A7RK     TCGA-TQ-A7RM 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RN     TCGA-TQ-A7RO     TCGA-TQ-A7RP     TCGA-TQ-A7RQ 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RR     TCGA-TQ-A7RS     TCGA-TQ-A7RU     TCGA-TQ-A7RV 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-TQ-A7RW     TCGA-TQ-A8XE     TCGA-VM-A8C8     TCGA-VM-A8C9 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VM-A8CA     TCGA-VM-A8CB     TCGA-VM-A8CD     TCGA-VM-A8CE 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VM-A8CF     TCGA-VM-A8CH     TCGA-VV-A829     TCGA-VV-A86M 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-VW-A7QS     TCGA-VW-A8FI     TCGA-W9-A837     TCGA-WH-A86K 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-WY-A858     TCGA-WY-A859     TCGA-WY-A85A     TCGA-WY-A85B 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 
    TCGA-WY-A85C     TCGA-WY-A85D     TCGA-WY-A85E 
"PAN3 WILD-TYPE" "PAN3 WILD-TYPE" "PAN3 WILD-TYPE" 

Clustering(169) Variable = PPL MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPL MUTATED        0      0      1      2
  PPL WILD-TYPE     78     41     63     55
D169V1, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           0            78
  CLUS_2           0            41
  CLUS_3           1            63
  CLUS_4           2            55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPL MUTATED        0      1      1      1
  PPL WILD-TYPE     63     49     47     78
D169V2, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           0            63
  CLUS_2           1            49
  CLUS_3           1            47
  CLUS_4           1            78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPL MUTATED        0      2      0      1
  PPL WILD-TYPE     70     96     44     62
D169V3, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           0            70
  CLUS_2           2            96
  CLUS_3           0            44
  CLUS_4           1            62
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  PPL MUTATED        1      1      1
  PPL WILD-TYPE    137     60     75
D169V4, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           1           137
  CLUS_2           1            60
  CLUS_3           1            75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  PPL MUTATED        3      5      0
  PPL WILD-TYPE    289    427     62
D169V5, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           3           289
  CLUS_2           5           427
  CLUS_3           0            62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPL MUTATED        2      4      0      2
  PPL WILD-TYPE    151    219     88    159
D169V6, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           2           151
  CLUS_2           4           219
  CLUS_3           0            88
  CLUS_4           2           159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPL MUTATED        4      0      3      1
  PPL WILD-TYPE    181    155    135     94
D169V7, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           4           181
  CLUS_2           0           155
  CLUS_3           3           135
  CLUS_4           1            94
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  PPL MUTATED        3      5      0
  PPL WILD-TYPE    202    215    148
D169V8, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           3           202
  CLUS_2           5           215
  CLUS_3           0           148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  PPL MUTATED        5      3      1
  PPL WILD-TYPE    233    188    227
D169V9, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           5           233
  CLUS_2           3           188
  CLUS_3           1           227
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  PPL MUTATED        2      4      3
  PPL WILD-TYPE    194    187    267
D169V10, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           2           194
  CLUS_2           4           187
  CLUS_3           3           267
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPL MUTATED        0      3      0      3
  PPL WILD-TYPE    140    104     83    179
D169V11, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           0           140
  CLUS_2           3           104
  CLUS_3           0            83
  CLUS_4           3           179
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  PPL MUTATED        2      2      2
  PPL WILD-TYPE    221    184    101
D169V12, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           2           221
  CLUS_2           2           184
  CLUS_3           2           101
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPL MUTATED        1      2      2      1
  PPL WILD-TYPE    126    117    104    155
D169V13, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           1           126
  CLUS_2           2           117
  CLUS_3           2           104
  CLUS_4           1           155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  PPL MUTATED        1      3      0      0      0      2
  PPL WILD-TYPE     98     74    120     57     63     90
D169V14, multiclass
        clus
vv       PPL MUTATED PPL WILD-TYPE
  CLUS_1           1            98
  CLUS_2           3            74
  CLUS_3           0           120
  CLUS_4           0            57
  CLUS_5           0            63
  CLUS_6           2            90
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(170) Variable = IGFN1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IGFN1 MUTATED        1      1      1      1
  IGFN1 WILD-TYPE     77     40     63     56
D170V1, multiclass
        clus
vv       IGFN1 MUTATED IGFN1 WILD-TYPE
  CLUS_1             1              77
  CLUS_2             1              40
  CLUS_3             1              63
  CLUS_4             1              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IGFN1 MUTATED        1      1      1      1
  IGFN1 WILD-TYPE     62     49     47     78
D170V2, multiclass
        clus
vv       IGFN1 MUTATED IGFN1 WILD-TYPE
  CLUS_1             1              62
  CLUS_2             1              49
  CLUS_3             1              47
  CLUS_4             1              78
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IGFN1 MUTATED        2      1      1      2
  IGFN1 WILD-TYPE     68     97     43     61
D170V3, multiclass
        clus
vv       IGFN1 MUTATED IGFN1 WILD-TYPE
  CLUS_1             2              68
  CLUS_2             1              97
  CLUS_3             1              43
  CLUS_4             2              61
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IGFN1 MUTATED        4      0      2
  IGFN1 WILD-TYPE    134     61     74
D170V4, multiclass
        clus
vv       IGFN1 MUTATED IGFN1 WILD-TYPE
  CLUS_1             4             134
  CLUS_2             0              61
  CLUS_3             2              74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IGFN1 MUTATED        7      1      0
  IGFN1 WILD-TYPE    285    431     62
D170V5, multiclass
        clus
vv       IGFN1 MUTATED IGFN1 WILD-TYPE
  CLUS_1             7             285
  CLUS_2             1             431
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IGFN1 MUTATED        5      0      1      0
  IGFN1 WILD-TYPE    148    223     87    161
D170V6, multiclass
        clus
vv       IGFN1 MUTATED IGFN1 WILD-TYPE
  CLUS_1             5             148
  CLUS_2             0             223
  CLUS_3             1              87
  CLUS_4             0             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IGFN1 MUTATED        2      2      1      0
  IGFN1 WILD-TYPE    183    153    137     95
D170V7, multiclass
        clus
vv       IGFN1 MUTATED IGFN1 WILD-TYPE
  CLUS_1             2             183
  CLUS_2             2             153
  CLUS_3             1             137
  CLUS_4             0              95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IGFN1 MUTATED        2      1      2
  IGFN1 WILD-TYPE    203    219    146
D170V8, multiclass
        clus
vv       IGFN1 MUTATED IGFN1 WILD-TYPE
  CLUS_1             2             203
  CLUS_2             1             219
  CLUS_3             2             146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IGFN1 MUTATED        5      1      0
  IGFN1 WILD-TYPE    233    190    228
D170V9, multiclass
        clus
vv       IGFN1 MUTATED IGFN1 WILD-TYPE
  CLUS_1             5             233
  CLUS_2             1             190
  CLUS_3             0             228
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IGFN1 MUTATED        4      1      1
  IGFN1 WILD-TYPE    192    190    269
D170V10, multiclass
        clus
vv       IGFN1 MUTATED IGFN1 WILD-TYPE
  CLUS_1             4             192
  CLUS_2             1             190
  CLUS_3             1             269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IGFN1 MUTATED        1      1      0      1
  IGFN1 WILD-TYPE    139    106     83    181
D170V11, multiclass
        clus
vv       IGFN1 MUTATED IGFN1 WILD-TYPE
  CLUS_1             1             139
  CLUS_2             1             106
  CLUS_3             0              83
  CLUS_4             1             181
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IGFN1 MUTATED        0      0      3
  IGFN1 WILD-TYPE    223    186    100
D170V12, multiclass
        clus
vv       IGFN1 MUTATED IGFN1 WILD-TYPE
  CLUS_1             0             223
  CLUS_2             0             186
  CLUS_3             3             100
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IGFN1 MUTATED        0      1      0      2
  IGFN1 WILD-TYPE    127    118    106    154
D170V13, multiclass
        clus
vv       IGFN1 MUTATED IGFN1 WILD-TYPE
  CLUS_1             0             127
  CLUS_2             1             118
  CLUS_3             0             106
  CLUS_4             2             154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  IGFN1 MUTATED        0      0      0      0      2      1
  IGFN1 WILD-TYPE     99     77    120     57     61     91
D170V14, multiclass
        clus
vv       IGFN1 MUTATED IGFN1 WILD-TYPE
  CLUS_1             0              99
  CLUS_2             0              77
  CLUS_3             0             120
  CLUS_4             0              57
  CLUS_5             2              61
  CLUS_6             1              91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(171) Variable = GLYAT MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLYAT MUTATED        0      0      0      1
  GLYAT WILD-TYPE     78     41     64     56
D171V1, multiclass
[1] "Remove cluster labels:" "GLYAT MUTATED"         
clus
  GLYAT MUTATED GLYAT WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2629      TCGA-19-2631      TCGA-19-4068 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLYAT MUTATED        0      1      0      0
  GLYAT WILD-TYPE     63     49     48     79
D171V2, multiclass
[1] "Remove cluster labels:" "GLYAT MUTATED"         
clus
  GLYAT MUTATED GLYAT WILD-TYPE 
              1             239 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-2470 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-02-2483      TCGA-02-2485      TCGA-02-2486      TCGA-06-0122 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0124      TCGA-06-0126      TCGA-06-0128      TCGA-06-0129 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0130      TCGA-06-0132      TCGA-06-0137      TCGA-06-0139 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0152      TCGA-06-0154      TCGA-06-0155      TCGA-06-0157 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0158      TCGA-06-0166      TCGA-06-0167      TCGA-06-0168 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-2557      TCGA-06-2558      TCGA-06-2559      TCGA-06-2561 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-2562      TCGA-06-2563      TCGA-06-2564      TCGA-06-2565 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-2567      TCGA-06-2569      TCGA-06-2570      TCGA-06-5408 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5410      TCGA-06-5411      TCGA-06-5412      TCGA-06-5413 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5414      TCGA-06-5415      TCGA-06-5417      TCGA-06-5418 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5856      TCGA-06-5858      TCGA-06-5859      TCGA-06-6389 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-6390      TCGA-06-6391      TCGA-08-0386      TCGA-12-0616 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-0618      TCGA-12-0619      TCGA-12-0688      TCGA-12-0692 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-0821      TCGA-12-1597      TCGA-12-3649      TCGA-12-3650 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-3652      TCGA-12-3653      TCGA-12-5295      TCGA-12-5299 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-5301      TCGA-14-0781      TCGA-14-0786      TCGA-14-0787 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-0789      TCGA-14-0790      TCGA-14-0813      TCGA-14-0817 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1456      TCGA-14-1823      TCGA-14-1825 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-1829      TCGA-14-2554      TCGA-14-3476      TCGA-14-4157 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-15-0742      TCGA-15-1444      TCGA-16-0846      TCGA-16-0861 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-16-1045      TCGA-16-1048      TCGA-19-1390      TCGA-19-1790 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-2619      TCGA-19-2620      TCGA-19-2623      TCGA-19-2624 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-2625      TCGA-19-2629      TCGA-19-2631      TCGA-19-4068 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-5947      TCGA-19-5950      TCGA-19-5951      TCGA-19-5952 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-1830      TCGA-27-1831      TCGA-27-1832      TCGA-27-1833 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-1834      TCGA-27-1835      TCGA-27-1836      TCGA-27-1837 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-1838      TCGA-27-2518      TCGA-27-2519      TCGA-27-2521 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-2523      TCGA-27-2524      TCGA-27-2526      TCGA-27-2527 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-2528      TCGA-28-1747      TCGA-28-1753      TCGA-28-2501 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-2502      TCGA-28-2509      TCGA-28-2510      TCGA-28-2513 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-2514      TCGA-28-5204      TCGA-28-5207      TCGA-28-5208 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-5209      TCGA-28-5213      TCGA-28-5214      TCGA-28-5215 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-5216      TCGA-28-5218      TCGA-28-5219      TCGA-28-5220 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-6450      TCGA-32-1970      TCGA-32-1977      TCGA-32-1979 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-1980      TCGA-32-1982      TCGA-32-1986      TCGA-32-1991 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-2491      TCGA-32-2494      TCGA-32-2495      TCGA-32-2615 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-2632      TCGA-32-2634      TCGA-32-2638      TCGA-32-4208 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-4209      TCGA-32-4210      TCGA-32-4211      TCGA-32-4213 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-4719      TCGA-32-5222      TCGA-41-2571      TCGA-41-2572 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-41-2573      TCGA-41-2575      TCGA-41-3392      TCGA-41-3393 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-41-3915      TCGA-41-4097      TCGA-41-5651      TCGA-76-4925 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6282 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6285      TCGA-81-5910      TCGA-87-5896 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLYAT MUTATED        0      1      0      0
  GLYAT WILD-TYPE     70     97     44     63
D171V3, multiclass
[1] "Remove cluster labels:" "GLYAT MUTATED"         
clus
  GLYAT MUTATED GLYAT WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GLYAT MUTATED        1      0      0
  GLYAT WILD-TYPE    137     61     76
D171V4, multiclass
[1] "Remove cluster labels:" "GLYAT MUTATED"         
clus
  GLYAT MUTATED GLYAT WILD-TYPE 
              1             274 
     TCGA-02-0003      TCGA-02-0033      TCGA-02-0047      TCGA-02-0055 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-02-2470      TCGA-02-2483      TCGA-02-2485      TCGA-02-2486 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0122      TCGA-06-0124      TCGA-06-0126      TCGA-06-0128 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0129      TCGA-06-0130      TCGA-06-0137      TCGA-06-0139 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0140      TCGA-06-0141      TCGA-06-0142      TCGA-06-0145 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0151      TCGA-06-0152      TCGA-06-0154      TCGA-06-0155 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0157      TCGA-06-0158      TCGA-06-0166      TCGA-06-0168 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0169      TCGA-06-0173      TCGA-06-0174      TCGA-06-0178 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0184      TCGA-06-0185      TCGA-06-0188      TCGA-06-0189 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0192      TCGA-06-0195      TCGA-06-0213      TCGA-06-0214 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0216      TCGA-06-0219      TCGA-06-0237      TCGA-06-0238 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0240      TCGA-06-0241      TCGA-06-0644      TCGA-06-0645 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0646      TCGA-06-0648      TCGA-06-0649      TCGA-06-0650 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0686      TCGA-06-0743      TCGA-06-0744      TCGA-06-0745 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0747      TCGA-06-0749      TCGA-06-0750      TCGA-06-0875 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0876      TCGA-06-0877      TCGA-06-0878      TCGA-06-0879 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-0881      TCGA-06-0882      TCGA-06-0939      TCGA-06-1804 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-1806      TCGA-06-2557      TCGA-06-2558      TCGA-06-2559 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-2561      TCGA-06-2562      TCGA-06-2563      TCGA-06-2564 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-2565      TCGA-06-2567      TCGA-06-2569      TCGA-06-2570 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5408      TCGA-06-5410      TCGA-06-5411      TCGA-06-5412 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5413      TCGA-06-5414      TCGA-06-5415      TCGA-06-5417 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-5418      TCGA-06-5856      TCGA-06-5858      TCGA-06-5859 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-6388      TCGA-06-6389      TCGA-06-6390      TCGA-06-6391 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-6693      TCGA-06-6694      TCGA-06-6695      TCGA-06-6697 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-06-6698      TCGA-06-6699      TCGA-06-6700      TCGA-06-6701 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-08-0386      TCGA-12-0616      TCGA-12-0618      TCGA-12-0619 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-0688      TCGA-12-0692      TCGA-12-0821      TCGA-12-1597 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-3649      TCGA-12-3650      TCGA-12-3652      TCGA-12-3653 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-12-5295      TCGA-12-5299      TCGA-12-5301      TCGA-14-0740 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-0781      TCGA-14-0786      TCGA-14-0787      TCGA-14-0789 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-0790      TCGA-14-0813      TCGA-14-0817      TCGA-14-0862 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-0871      TCGA-14-1043      TCGA-14-1395      TCGA-14-1450 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-1456      TCGA-14-1823      TCGA-14-1825      TCGA-14-1829 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-14-2554      TCGA-14-3476      TCGA-14-4157      TCGA-15-0742 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-15-1444      TCGA-16-0846      TCGA-16-0861      TCGA-16-1045 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-16-1048      TCGA-19-1390      TCGA-19-1790      TCGA-19-2619 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-2620      TCGA-19-2623      TCGA-19-2624      TCGA-19-2625 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-2629      TCGA-19-2631      TCGA-19-4068      TCGA-19-5947 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-5950      TCGA-19-5951      TCGA-19-5952      TCGA-19-5953 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-19-5954      TCGA-19-5955      TCGA-19-5958      TCGA-19-5959 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-26-1439      TCGA-26-1442      TCGA-26-5132      TCGA-26-5133 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-26-5134      TCGA-26-5135      TCGA-26-5136      TCGA-26-5139 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-26-6173      TCGA-26-6174      TCGA-27-1830      TCGA-27-1831 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-1832      TCGA-27-1833      TCGA-27-1834      TCGA-27-1835 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-1836      TCGA-27-1837      TCGA-27-1838      TCGA-27-2518 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-2519      TCGA-27-2521      TCGA-27-2523      TCGA-27-2524 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-27-2526      TCGA-27-2527      TCGA-27-2528      TCGA-28-1747 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-1753      TCGA-28-2502      TCGA-28-2509      TCGA-28-2510 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-2513      TCGA-28-2514      TCGA-28-5204      TCGA-28-5207 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-5208      TCGA-28-5209      TCGA-28-5211      TCGA-28-5213 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-5214      TCGA-28-5215      TCGA-28-5216      TCGA-28-5218 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-28-5219      TCGA-28-5220      TCGA-28-6450      TCGA-32-1970 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-1977      TCGA-32-1979      TCGA-32-1980      TCGA-32-1982 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-1986      TCGA-32-1991      TCGA-32-2491      TCGA-32-2494 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-2495      TCGA-32-2615      TCGA-32-2632      TCGA-32-2634 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-2638      TCGA-32-4208      TCGA-32-4209      TCGA-32-4210 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-32-4211      TCGA-32-4213      TCGA-32-4719      TCGA-32-5222 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-41-2571      TCGA-41-2572      TCGA-41-2573      TCGA-41-2575 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-41-3392      TCGA-41-3393      TCGA-41-3915      TCGA-41-4097 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-41-5651      TCGA-41-6646      TCGA-74-6573      TCGA-74-6575 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-74-6577      TCGA-74-6578      TCGA-74-6584      TCGA-76-4925 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-4926      TCGA-76-4927      TCGA-76-4928      TCGA-76-4929 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-4931      TCGA-76-4932      TCGA-76-4934      TCGA-76-4935 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6191      TCGA-76-6192      TCGA-76-6193      TCGA-76-6280 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6282      TCGA-76-6283      TCGA-76-6285      TCGA-76-6286 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6656      TCGA-76-6657      TCGA-76-6660      TCGA-76-6661 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-76-6662      TCGA-76-6663      TCGA-76-6664      TCGA-81-5910 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
     TCGA-81-5911      TCGA-87-5896 
"GLYAT WILD-TYPE" "GLYAT WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GLYAT MUTATED        2      3      0
  GLYAT WILD-TYPE    290    429     62
D171V5, multiclass
        clus
vv       GLYAT MUTATED GLYAT WILD-TYPE
  CLUS_1             2             290
  CLUS_2             3             429
  CLUS_3             0              62
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLYAT MUTATED        2      2      0      1
  GLYAT WILD-TYPE    151    221     88    160
D171V6, multiclass
        clus
vv       GLYAT MUTATED GLYAT WILD-TYPE
  CLUS_1             2             151
  CLUS_2             2             221
  CLUS_3             0              88
  CLUS_4             1             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLYAT MUTATED        2      0      2      0
  GLYAT WILD-TYPE    183    155    136     95
D171V7, multiclass
        clus
vv       GLYAT MUTATED GLYAT WILD-TYPE
  CLUS_1             2             183
  CLUS_2             0             155
  CLUS_3             2             136
  CLUS_4             0              95
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GLYAT MUTATED        2      2      0
  GLYAT WILD-TYPE    203    218    148
D171V8, multiclass
        clus
vv       GLYAT MUTATED GLYAT WILD-TYPE
  CLUS_1             2             203
  CLUS_2             2             218
  CLUS_3             0             148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GLYAT MUTATED        2      0      3
  GLYAT WILD-TYPE    236    191    225
D171V9, multiclass
        clus
vv       GLYAT MUTATED GLYAT WILD-TYPE
  CLUS_1             2             236
  CLUS_2             0             191
  CLUS_3             3             225
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GLYAT MUTATED        1      3      1
  GLYAT WILD-TYPE    195    188    269
D171V10, multiclass
        clus
vv       GLYAT MUTATED GLYAT WILD-TYPE
  CLUS_1             1             195
  CLUS_2             3             188
  CLUS_3             1             269
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLYAT MUTATED        1      2      1      0
  GLYAT WILD-TYPE    139    105     82    182
D171V11, multiclass
        clus
vv       GLYAT MUTATED GLYAT WILD-TYPE
  CLUS_1             1             139
  CLUS_2             2             105
  CLUS_3             1              82
  CLUS_4             0             182
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GLYAT MUTATED        3      0      1
  GLYAT WILD-TYPE    220    186    102
D171V12, multiclass
        clus
vv       GLYAT MUTATED GLYAT WILD-TYPE
  CLUS_1             3             220
  CLUS_2             0             186
  CLUS_3             1             102
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLYAT MUTATED        1      1      1      1
  GLYAT WILD-TYPE    126    118    105    155
D171V13, multiclass
        clus
vv       GLYAT MUTATED GLYAT WILD-TYPE
  CLUS_1             1             126
  CLUS_2             1             118
  CLUS_3             1             105
  CLUS_4             1             155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5 CLUS_6
  GLYAT MUTATED        1      1      0      1      0      1
  GLYAT WILD-TYPE     98     76    120     56     63     91
D171V14, multiclass
        clus
vv       GLYAT MUTATED GLYAT WILD-TYPE
  CLUS_1             1              98
  CLUS_2             1              76
  CLUS_3             0             120
  CLUS_4             1              56
  CLUS_5             0              63
  CLUS_6             1              91
[1] 6 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
