		Clinical Features	Time to Death		YEARS_TO_BIRTH		PATHOLOGIC_STAGE		PATHOLOGY_T_STAGE		PATHOLOGY_N_STAGE		PATHOLOGY_M_STAGE		GENDER		KARNOFSKY_PERFORMANCE_SCORE		NUMBER_PACK_YEARS_SMOKED		YEAR_OF_TOBACCO_SMOKING_ONSET		RACE		ETHNICITY	
	nCNV (%)	nWild-Type	logrank test_P	logrank test_Q	Wilcoxon-test_P	Wilcoxon-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Wilcoxon-test_P	Wilcoxon-test_Q	Wilcoxon-test_P	Wilcoxon-test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
3p gain	8 (12%)	58	0.0083361	0.42	0.08366	0.639	0.01643	0.539	0.46483	1	0.032692	0.616	0.2127	0.86	0.12762	0.706	1	1	NA	NA	NA	NA	0.29355	0.947	1	1
3q gain	8 (12%)	58	0.0083361	0.42	0.08366	0.639	0.01616	0.539	0.46175	1	0.032692	0.616	0.2127	0.86	0.12762	0.706	1	1	NA	NA	NA	NA	0.29461	0.947	1	1
4p gain	23 (35%)	43	0.87587	1	0.22048	0.874	0.03751	0.616	0.58498	1	1	1	0.12381	0.704	1	1	0.52797	1	0.031699	0.616	NA	NA	1	1	0.27712	0.947
4q gain	24 (36%)	42	0.88522	1	0.26544	0.945	0.13993	0.726	0.80856	1	1	1	0.12381	0.704	1	1	0.52797	1	0.046719	0.628	0.036888	0.616	1	1	0.28699	0.947
5p gain	8 (12%)	58	0.0070205	0.408	0.06607	0.639	0.00148	0.186	0.36366	1	0.087416	0.642	0.0095238	0.424	0.45546	1	NA	NA	NA	NA	NA	NA	1	1	1	1
5q gain	8 (12%)	58	0.0070205	0.408	0.06607	0.639	0.00135	0.186	0.36505	1	0.087416	0.642	0.0095238	0.424	0.45546	1	NA	NA	NA	NA	NA	NA	1	1	1	1
7p gain	24 (36%)	42	0.028138	0.616	0.17162	0.759	0.36212	1	0.69096	1	0.6361	1	0.12381	0.704	0.19497	0.832	0.52797	1	0.78371	1	0.060602	0.628	1	1	0.30328	0.947
7q gain	24 (36%)	42	0.028138	0.616	0.17162	0.759	0.36267	1	0.69163	1	0.6361	1	0.12381	0.704	0.19497	0.832	0.52797	1	0.78371	1	0.060602	0.628	1	1	0.30328	0.947
8p gain	16 (24%)	50	0.95742	1	0.13438	0.721	0.58231	1	0.62095	1	0.63945	1	0.4	1	0.40034	1	0.52797	1	0.39401	1	NA	NA	1	1	0.57049	1
8q gain	17 (26%)	49	0.95742	1	0.14235	0.726	0.29601	0.947	0.64039	1	0.63945	1	0.057143	0.628	0.39142	1	0.52797	1	0.39401	1	NA	NA	1	1	0.57049	1
9p gain	10 (15%)	56	0.62398	1	0.97859	1	0.12165	0.704	0.19597	0.832	0.30573	0.947	1	1	1	1	1	1	0.75893	1	NA	NA	0.37666	1	0.53476	1
9q gain	10 (15%)	56	0.62398	1	0.97859	1	0.12204	0.704	0.19491	0.832	0.30573	0.947	1	1	1	1	1	1	0.75893	1	NA	NA	0.37436	1	0.53476	1
10p gain	4 (6%)	62	0.55809	1	0.33982	0.994	0.26907	0.947	0.45514	1	NA	NA	1	1	1	1	NA	NA	NA	NA	NA	NA	1	1	1	1
11p gain	15 (23%)	51	0.95598	1	0.81243	1	0.74059	1	0.81374	1	0.61737	1	0.44286	1	1	1	1	1	0.046719	0.628	0.036888	0.616	0.55752	1	0.07563	0.639
11q gain	15 (23%)	51	0.48491	1	0.94508	1	0.74111	1	0.80999	1	1	1	0.44286	1	1	1	1	1	0.046719	0.628	0.036888	0.616	0.56045	1	0.07563	0.639
12p gain	19 (29%)	47	0.66053	1	0.013683	0.493	0.076629	0.639	0.31808	0.962	1	1	0.087302	0.642	0.41203	1	0.52797	1	0.35723	1	NA	NA	1	1	1	1
12q gain	20 (30%)	46	0.20916	0.86	0.069554	0.639	0.11011	0.704	0.70911	1	0.33007	0.986	0.087302	0.642	0.59328	1	0.52797	1	0.23427	0.894	0.036888	0.616	0.8055	1	1	1
14q gain	21 (32%)	45	0.81862	1	0.14427	0.726	0.097139	0.683	0.38351	1	1	1	0.10476	0.704	0.79421	1	0.52797	1	0.23427	0.894	0.036888	0.616	1	1	0.60915	1
15q gain	21 (32%)	45	0.33961	0.994	0.28265	0.947	0.41215	1	0.47665	1	0.35044	1	0.10476	0.704	0.79421	1	0.52797	1	1	1	0.23304	0.894	0.81466	1	0.12381	0.704
16p gain	22 (33%)	44	0.57181	1	0.79071	1	0.34718	1	0.64311	1	1	1	0.12381	0.704	1	1	0.52797	1	0.046719	0.628	0.036888	0.616	1	1	0.12381	0.704
16q gain	21 (32%)	45	0.21703	0.873	0.9945	1	0.47373	1	0.40251	1	0.63533	1	1	1	1	1	0.52797	1	0.046719	0.628	0.036888	0.616	1	1	0.12381	0.704
18p gain	17 (26%)	49	0.87219	1	0.27763	0.947	0.28736	0.947	0.43437	1	0.30335	0.947	0.4	1	0.77561	1	1	1	0.29752	0.947	NA	NA	1	1	0.57049	1
18q gain	16 (24%)	50	0.35469	1	0.52462	1	0.31104	0.949	0.19913	0.841	0.30335	0.947	0.4	1	1	1	1	1	0.29752	0.947	NA	NA	1	1	0.30481	0.947
19p gain	20 (30%)	46	0.033229	0.616	0.034435	0.616	0.01352	0.493	0.41772	1	0.0035752	0.344	0.071429	0.639	0.59328	1	1	1	0.78371	1	0.060602	0.628	0.36494	1	0.29038	0.947
19q gain	18 (27%)	48	0.15428	0.741	0.017122	0.539	0.22665	0.892	0.44775	1	0.16558	0.757	0.057143	0.628	1	1	1	1	1	1	0.23304	0.894	0.46844	1	0.29038	0.947
20p gain	22 (33%)	44	0.094492	0.68	0.064185	0.638	0.26392	0.945	0.89623	1	0.14071	0.726	0.52381	1	0.42613	1	0.52797	1	0.78371	1	0.060602	0.628	0.37113	1	0.63399	1
20q gain	22 (33%)	44	0.094492	0.68	0.064185	0.638	0.26638	0.945	0.8966	1	0.14071	0.726	0.52381	1	0.42613	1	0.52797	1	0.78371	1	0.060602	0.628	0.36995	1	0.63399	1
21q gain	4 (6%)	62	0.49638	1	0.59075	1	1	1	1	1	NA	NA	NA	NA	1	1	1	1	NA	NA	NA	NA	1	1	1	1
22q gain	19 (29%)	47	0.16438	0.757	0.41522	1	0.49368	1	0.52307	1	0.16558	0.757	0.52381	1	0.41203	1	1	1	0.78371	1	0.060602	0.628	0.7952	1	0.58768	1
xp gain	8 (12%)	58	0.34027	0.994	0.95297	1	0.90605	1	1	1	1	1	0.2619	0.943	1	1	1	1	NA	NA	NA	NA	0.5697	1	0.53476	1
xq gain	8 (12%)	58	0.34027	0.994	0.95297	1	0.90442	1	1	1	1	1	0.2619	0.943	1	1	1	1	NA	NA	NA	NA	0.56716	1	0.53476	1
1p loss	53 (80%)	13	0.43093	1	0.47784	1	0.02893	0.616	0.04165	0.628	1	1	0.1619	0.756	0.53446	1	0.51049	1	0.60902	1	NA	NA	1	1	1	1
1q loss	51 (77%)	15	0.82307	1	0.22068	0.874	0.02294	0.616	0.054719	0.628	0.52875	1	0.2127	0.86	0.56267	1	0.51049	1	NA	NA	NA	NA	1	1	1	1
2p loss	46 (70%)	20	0.94086	1	0.24094	0.906	0.14544	0.726	0.11462	0.704	1	1	0.4	1	0.28399	0.947	0.51049	1	NA	NA	NA	NA	1	1	1	1
2q loss	46 (70%)	20	0.94086	1	0.24094	0.906	0.14438	0.726	0.11417	0.704	1	1	0.4	1	0.28399	0.947	0.51049	1	NA	NA	NA	NA	1	1	1	1
3p loss	9 (14%)	57	0.19347	0.832	0.046481	0.628	0.075659	0.639	0.02355	0.616	1	1	1	1	0.46918	1	NA	NA	NA	NA	NA	NA	1	1	0.53476	1
3q loss	8 (12%)	58	0.2309	0.894	0.10699	0.704	0.14068	0.726	0.052779	0.628	1	1	1	1	0.25608	0.943	NA	NA	NA	NA	NA	NA	1	1	0.53476	1
5p loss	10 (15%)	56	0.77149	1	0.64177	1	0.13434	0.721	0.083119	0.639	1	1	1	1	1	1	0.42308	1	0.15543	0.741	0.073638	0.639	0.15771	0.741	0.12121	0.704
5q loss	10 (15%)	56	0.77149	1	0.64177	1	0.13202	0.718	0.083279	0.639	1	1	1	1	1	1	0.42308	1	0.15543	0.741	0.073638	0.639	0.15742	0.741	0.12121	0.704
6p loss	51 (77%)	15	0.57922	1	0.37871	1	0.081999	0.639	0.056619	0.628	0.56754	1	0.35556	1	0.24419	0.909	0.51049	1	NA	NA	NA	NA	1	1	1	1
6q loss	51 (77%)	15	0.57922	1	0.37871	1	0.083119	0.639	0.055399	0.628	0.56754	1	0.35556	1	0.24419	0.909	0.51049	1	NA	NA	NA	NA	1	1	1	1
8p loss	10 (15%)	56	0.1709	0.759	0.78839	1	0.66289	1	0.32403	0.972	1	1	1	1	1	1	1	1	NA	NA	NA	NA	0.65544	1	0.55508	1
8q loss	9 (14%)	57	0.20433	0.858	0.59417	1	0.74144	1	0.43844	1	1	1	1	1	1	1	1	1	NA	NA	NA	NA	0.61139	1	0.56578	1
9p loss	9 (14%)	57	0.050524	0.628	0.0065263	0.408	0.87291	1	0.90584	1	1	1	1	1	0.72701	1	NA	NA	NA	NA	NA	NA	1	1	0.46583	1
9q loss	10 (15%)	56	0.0036364	0.344	0.011638	0.463	1	1	1	1	0.52875	1	1	1	0.5083	1	NA	NA	NA	NA	NA	NA	1	1	0.53476	1
10p loss	48 (73%)	18	0.1279	0.706	0.76226	1	0.54413	1	0.39452	1	1	1	0.30952	0.949	1	1	0.55944	1	0.26049	0.943	NA	NA	1	1	1	1
10q loss	49 (74%)	17	0.146	0.726	0.9532	1	0.34575	1	0.21119	0.86	1	1	0.30952	0.949	1	1	0.55944	1	0.26049	0.943	NA	NA	1	1	1	1
11p loss	7 (11%)	59	0.30544	0.947	0.052659	0.628	0.096169	0.683	0.078349	0.639	0.46143	1	1	1	0.69108	1	1	1	NA	NA	NA	NA	1	1	1	1
11q loss	7 (11%)	59	0.30544	0.947	0.052659	0.628	0.097599	0.683	0.077389	0.639	0.46143	1	1	1	0.69108	1	1	1	NA	NA	NA	NA	1	1	1	1
13q loss	43 (65%)	23	0.54511	1	0.064122	0.638	0.44702	1	0.36097	1	0.30071	0.947	1	1	0.2941	0.947	1	1	0.47395	1	0.37109	1	0.81696	1	1	1
16p loss	3 (5%)	63	5.4625e-07	0.000206	0.92638	1	0.00489	0.37	0.02575	0.616	0.00070472	0.133	1	1	1	1	NA	NA	NA	NA	NA	NA	1	1	1	1
16q loss	5 (8%)	61	2.0107e-09	1.52e-06	0.2208	0.874	0.00476	0.37	0.04763	0.628	0.00016452	0.0415	0.10952	0.704	0.64106	1	NA	NA	NA	NA	NA	NA	1	1	1	1
17p loss	50 (76%)	16	0.78793	1	0.14856	0.729	0.074269	0.639	0.04183	0.628	0.56754	1	0.35556	1	0.15789	0.741	0.51049	1	NA	NA	NA	NA	1	1	1	1
17q loss	50 (76%)	16	0.78793	1	0.14856	0.729	0.073379	0.639	0.04262	0.628	0.56754	1	0.35556	1	0.15789	0.741	0.51049	1	NA	NA	NA	NA	1	1	1	1
18p loss	7 (11%)	59	0.85942	1	0.42851	1	0.31274	0.95	0.78361	1	0.16625	0.757	1	1	0.43159	1	1	1	NA	NA	NA	NA	0.25498	0.943	1	1
18q loss	9 (14%)	57	0.29984	0.947	0.32177	0.969	0.082399	0.639	0.4905	1	0.21076	0.86	1	1	0.46918	1	1	1	NA	NA	NA	NA	0.3342	0.994	1	1
19q loss	3 (5%)	63	0.13166	0.718	0.42325	1	0.01141	0.463	0.19288	0.832	0.028894	0.616	1	1	1	1	NA	NA	NA	NA	NA	NA	0.10145	0.704	0.11111	0.704
20p loss	4 (6%)	62	0.63053	1	0.23679	0.9	0.13663	0.726	0.14174	0.726	0.30374	0.947	1	1	1	1	1	1	NA	NA	NA	NA	1	1	1	1
20q loss	3 (5%)	63	0.43607	1	0.43222	1	0.0415	0.628	0.02569	0.616	0.30374	0.947	1	1	1	1	NA	NA	NA	NA	NA	NA	1	1	NA	NA
21q loss	35 (53%)	31	0.03529	0.616	0.37509	1	0.90519	1	0.78138	1	0.07309	0.639	1	1	0.80476	1	0.23077	0.894	0.70482	1	0.11235	0.704	0.54612	1	0.61294	1
22q loss	8 (12%)	58	0.28986	0.947	0.78316	1	0.17919	0.788	1	1	0.21076	0.86	0.2619	0.943	0.055318	0.628	1	1	NA	NA	NA	NA	0.5704	1	0.38953	1
xp loss	38 (58%)	28	0.86493	1	0.08082	0.639	0.29303	0.947	0.54448	1	1	1	1	1	0.12798	0.706	1	1	0.16993	0.759	0.11235	0.704	0.81202	1	1	1
xq loss	38 (58%)	28	0.34043	0.994	0.11475	0.704	0.54939	1	0.51681	1	1	1	1	1	0.31124	0.949	1	1	0.16993	0.759	0.11235	0.704	0.81456	1	1	1
