[1] "R version 2.15.3 (2013-03-01)"
[1] "dx" ""  
[1] "dx" " " 
[1] "dx" " " 
[1] "opt:  MUTATION_RATE"
[1] "vtyp==survival in table1 generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==binary in table1 table generation"
                              Clinical feature               
DAYS_TO_DEATH_OR_LAST_FUP     "DAYS_TO_DEATH_OR_LAST_FUP"    
AGE                           "AGE"                          
AGE_mutation.rate             "AGE_mutation rate"            
PATHOLOGIC_STAGE              "PATHOLOGIC_STAGE"             
PATHOLOGY_T_STAGE             "PATHOLOGY_T_STAGE"            
PATHOLOGY_N_STAGE             "PATHOLOGY_N_STAGE"            
PATHOLOGY_M_STAGE             "PATHOLOGY_M_STAGE"            
GENDER                        "GENDER"                       
RADIATION_THERAPY             "RADIATION_THERAPY"            
KARNOFSKY_PERFORMANCE_SCORE   "KARNOFSKY_PERFORMANCE_SCORE"  
HISTOLOGICAL_TYPE             "HISTOLOGICAL_TYPE"            
NUMBER_PACK_YEARS_SMOKED      "NUMBER_PACK_YEARS_SMOKED"     
YEAR_OF_TOBACCO_SMOKING_ONSET "YEAR_OF_TOBACCO_SMOKING_ONSET"
RESIDUAL_TUMOR                "RESIDUAL_TUMOR"               
RACE                          "RACE"                         
ETHNICITY                     "ETHNICITY"                    
                              Statistical test            
DAYS_TO_DEATH_OR_LAST_FUP     "Cox regression test"       
AGE                           "Spearman correlation test" 
AGE_mutation.rate             "Linear Regression Analysis"
PATHOLOGIC_STAGE              "Kruskal-Wallis test"       
PATHOLOGY_T_STAGE             "Spearman correlation test" 
PATHOLOGY_N_STAGE             "Spearman correlation test" 
PATHOLOGY_M_STAGE             "Wilcoxon test"             
GENDER                        "Wilcoxon test"             
RADIATION_THERAPY             "Wilcoxon test"             
KARNOFSKY_PERFORMANCE_SCORE   "Spearman correlation test" 
HISTOLOGICAL_TYPE             "Kruskal-Wallis test"       
NUMBER_PACK_YEARS_SMOKED      "Spearman correlation test" 
YEAR_OF_TOBACCO_SMOKING_ONSET "Spearman correlation test" 
RESIDUAL_TUMOR                "Kruskal-Wallis test"       
RACE                          "Kruskal-Wallis test"       
ETHNICITY                     "Wilcoxon test"             
                              Significant variables
DAYS_TO_DEATH_OR_LAST_FUP     "N=0"                
AGE                           "N=0"                
AGE_mutation.rate             "N=0"                
PATHOLOGIC_STAGE              "N=0"                
PATHOLOGY_T_STAGE             "N=0"                
PATHOLOGY_N_STAGE             "N=2"                
PATHOLOGY_M_STAGE             "N=0"                
GENDER                        "N=0"                
RADIATION_THERAPY             "N=0"                
KARNOFSKY_PERFORMANCE_SCORE   "N=0"                
HISTOLOGICAL_TYPE             "N=0"                
NUMBER_PACK_YEARS_SMOKED      "N=0"                
YEAR_OF_TOBACCO_SMOKING_ONSET "N=1"                
RESIDUAL_TUMOR                "N=0"                
RACE                          "N=0"                
ETHNICITY                     "N=0"                
                              Associated with                       
DAYS_TO_DEATH_OR_LAST_FUP     " "                                   
AGE                           " "                                   
AGE_mutation.rate             " "                                   
PATHOLOGIC_STAGE              " "                                   
PATHOLOGY_T_STAGE             " "                                   
PATHOLOGY_N_STAGE             "higher stage"                        
PATHOLOGY_M_STAGE             " "                                   
GENDER                        " "                                   
RADIATION_THERAPY             " "                                   
KARNOFSKY_PERFORMANCE_SCORE   " "                                   
HISTOLOGICAL_TYPE             " "                                   
NUMBER_PACK_YEARS_SMOKED      " "                                   
YEAR_OF_TOBACCO_SMOKING_ONSET "higher year_of_tobacco_smoking_onset"
RESIDUAL_TUMOR                " "                                   
RACE                          " "                                   
ETHNICITY                     " "                                   
                              &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
DAYS_TO_DEATH_OR_LAST_FUP     " "                                                                                       
AGE                           " "                                                                                       
AGE_mutation.rate             " "                                                                                       
PATHOLOGIC_STAGE              " "                                                                                       
PATHOLOGY_T_STAGE             " "                                                                                       
PATHOLOGY_N_STAGE             "N=2"                                                                                     
PATHOLOGY_M_STAGE             " "                                                                                       
GENDER                        " "                                                                                       
RADIATION_THERAPY             " "                                                                                       
KARNOFSKY_PERFORMANCE_SCORE   " "                                                                                       
HISTOLOGICAL_TYPE             " "                                                                                       
NUMBER_PACK_YEARS_SMOKED      " "                                                                                       
YEAR_OF_TOBACCO_SMOKING_ONSET "N=1"                                                                                     
RESIDUAL_TUMOR                " "                                                                                       
RACE                          " "                                                                                       
ETHNICITY                     " "                                                                                       
                              Associated with                            
DAYS_TO_DEATH_OR_LAST_FUP     " "                                   " "  
AGE                           " "                                   " "  
AGE_mutation.rate             " "                                   " "  
PATHOLOGIC_STAGE              " "                                   " "  
PATHOLOGY_T_STAGE             " "                                   " "  
PATHOLOGY_N_STAGE             "lower stage"                         "N=0"
PATHOLOGY_M_STAGE             " "                                   " "  
GENDER                        " "                                   " "  
RADIATION_THERAPY             " "                                   " "  
KARNOFSKY_PERFORMANCE_SCORE   " "                                   " "  
HISTOLOGICAL_TYPE             " "                                   " "  
NUMBER_PACK_YEARS_SMOKED      " "                                   " "  
YEAR_OF_TOBACCO_SMOKING_ONSET "lower year_of_tobacco_smoking_onset" "N=0"
RESIDUAL_TUMOR                " "                                   " "  
RACE                          " "                                   " "  
ETHNICITY                     " "                                   " "  
[1] "vtyp==survival in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==binary in basici table generation"
