patient	chr	start	end	type	gene	Protein_Change	n_cos
PRAD-YL-A9WY-TP	12	25398284	25398284	Missense_Mutation	KRAS	p.G12D	14604
PRAD-XK-AAIW-TP	12	25398285	25398285	Missense_Mutation	KRAS	p.G12R	14364
PRAD-V1-A8MU-TP	7	140453134	140453134	Missense_Mutation	BRAF	p.K601E	14200
PRAD-CH-5772-TP	2	209113112	209113112	Missense_Mutation	IDH1	p.R132H	1492
PRAD-EJ-7125-TP	2	209113113	209113113	Missense_Mutation	IDH1	p.R132G	1492
PRAD-G9-7523-TP	2	209113112	209113112	Missense_Mutation	IDH1	p.R132H	1492
PRAD-KK-A6E7-TP	2	209113113	209113113	Missense_Mutation	IDH1	p.R132C	1492
PRAD-M7-A722-TP	2	209113113	209113113	Missense_Mutation	IDH1	p.R132C	1492
PRAD-HC-7230-TP	17	7577538	7577538	Missense_Mutation	TP53	p.R248Q	1009
PRAD-HC-A631-TP	17	7577538	7577538	Missense_Mutation	TP53	p.R248Q	1009
PRAD-KK-A8IG-TP	17	7577538	7577538	Missense_Mutation	TP53	p.R248Q	1009
PRAD-YL-A8HK-TP	17	7577538	7577538	Missense_Mutation	TP53	p.R248Q	1009
PRAD-ZG-A9LB-TP	17	7577539	7577539	Missense_Mutation	TP53	p.R248W	986
PRAD-HC-A9TH-TP	3	178952085	178952085	Missense_Mutation	PIK3CA	p.H1047R	977
PRAD-QU-A6IN-TP	3	178952085	178952085	Missense_Mutation	PIK3CA	p.H1047R	977
PRAD-ZG-A9LM-TP	17	7577121	7577121	Missense_Mutation	TP53	p.R273C	876
PRAD-J4-A67L-TP	17	7577536	7577536	Missense_Mutation	TP53	p.R249G	866
PRAD-G9-6499-TP	17	7578404	7578404	Missense_Mutation	TP53	p.C176R	865
PRAD-EJ-5507-TP	17	7578406	7578406	Missense_Mutation	TP53	p.R175H	722
PRAD-KK-A6DY-TP	17	7578406	7578406	Missense_Mutation	TP53	p.R175H	722
PRAD-CH-5752-TP	3	41266136	41266136	Missense_Mutation	CTNNB1	p.S45P	660
PRAD-EJ-8469-TP	3	178936091	178936091	Missense_Mutation	PIK3CA	p.E545K	654
PRAD-EJ-A65D-TP	3	41266124	41266124	Missense_Mutation	CTNNB1	p.T41A	527
PRAD-HC-7738-TP	3	41266124	41266124	Missense_Mutation	CTNNB1	p.T41A	527
PRAD-EJ-5521-TP	17	7577548	7577548	Missense_Mutation	TP53	p.G245S	399
PRAD-HC-A632-TP	17	7577548	7577548	Missense_Mutation	TP53	p.G245S	399
PRAD-KC-A4BL-TP	17	7577548	7577548	Missense_Mutation	TP53	p.G245S	399
PRAD-YL-A9WX-TP	17	7577548	7577548	Missense_Mutation	TP53	p.G245S	399
PRAD-HC-7212-TP	3	41266112	41266112	Missense_Mutation	CTNNB1	p.S37A	371
PRAD-EJ-5514-TP	17	7577094	7577094	Missense_Mutation	TP53	p.R282W	370
PRAD-QU-A6IM-TP	3	41266100	41266100	Missense_Mutation	CTNNB1	p.S33A	370
PRAD-VP-A872-TP	17	7577094	7577094	Missense_Mutation	TP53	p.R282W	370
PRAD-M7-A722-TP	3	41266101	41266101	Missense_Mutation	CTNNB1	p.S33C	349
PRAD-VP-A87H-TP	3	41266101	41266101	Missense_Mutation	CTNNB1	p.S33Y	349
PRAD-HC-7081-TP	3	178936083	178936083	Missense_Mutation	PIK3CA	p.E542A	335
PRAD-EJ-5525-TP	3	178936082	178936082	Missense_Mutation	PIK3CA	p.E542K	334
PRAD-VP-A87H-TP	3	178936082	178936082	Missense_Mutation	PIK3CA	p.E542K	334
PRAD-XK-AAJ3-TP	3	178936082	178936082	Missense_Mutation	PIK3CA	p.E542K	334
PRAD-EJ-5494-TP	3	41266098	41266098	Missense_Mutation	CTNNB1	p.D32V	311
PRAD-EJ-5525-TP	3	41266097	41266097	Missense_Mutation	CTNNB1	p.D32H	258
PRAD-HC-8262-TP	3	41266097	41266097	Missense_Mutation	CTNNB1	p.D32Y	258
PRAD-EJ-A7NJ-TP	11	533874	533874	Missense_Mutation	HRAS	p.Q61R	208
PRAD-HI-7168-TP	11	533874	533874	Missense_Mutation	HRAS	p.Q61R	208
PRAD-VN-A88N-TP	11	533874	533874	Missense_Mutation	HRAS	p.Q61R	208
PRAD-HC-7231-TP	3	178936094	178936094	Missense_Mutation	PIK3CA	p.Q546K	198
PRAD-4L-AA1F-TP	10	89720803	89720804	Frame_Shift_Del	PTEN	p.T319fs	191
PRAD-EJ-8472-TP	17	7578461	7578461	Missense_Mutation	TP53	p.V157F	156
PRAD-G9-7510-TP	17	7578271	7578271	Missense_Mutation	TP53	p.H193R	126
PRAD-G9-A9S0-TP	17	7577141	7577141	Missense_Mutation	TP53	p.G266V	126
PRAD-YL-A9WH-TP	17	7577570	7577570	Missense_Mutation	TP53	p.M237I	124
PRAD-CH-5761-TP	17	7578526	7578526	Missense_Mutation	TP53	p.C135F	116
PRAD-YL-A8SB-TP	17	7578526	7578526	Missense_Mutation	TP53	p.C135Y	116
PRAD-HC-A9TH-TP	17	7578525	7578525	Missense_Mutation	TP53	p.C135W	114
PRAD-YL-A9WK-TP	17	7578272	7578272	Missense_Mutation	TP53	p.H193N	111
PRAD-VP-A876-TP	17	7577126	7577126	Missense_Mutation	TP53	p.E271V	105
PRAD-EJ-A7NH-TP	17	7578443	7578443	Missense_Mutation	TP53	p.Y163H	93
PRAD-G9-A9S4-TP	17	7578443	7578443	Missense_Mutation	TP53	p.Y163H	93
PRAD-ZG-A9L1-TP	17	7578443	7578443	Missense_Mutation	TP53	p.Y163H	93
PRAD-J9-A52C-TP	9	21971120	21971120	Nonsense_Mutation	CDKN2A	p.R80*	89
PRAD-G9-7521-TP	17	7577085	7577085	Missense_Mutation	TP53	p.E285K	87
PRAD-HC-7742-TP	7	140453122	140453133	In_Frame_Del	BRAF	p.KSRW601del	85
PRAD-HC-7742-TP	17	7578222	7578223	Frame_Shift_Del	TP53	p.R209fs	69
PRAD-HI-7171-TP	17	7577566	7577566	Missense_Mutation	TP53	p.N239D	69
PRAD-V1-A9O5-TP	17	7577566	7577566	Missense_Mutation	TP53	p.N239D	69
PRAD-V1-A9ZI-TP	17	7578222	7578223	Frame_Shift_Del	TP53	p.R209fs	69
PRAD-V1-A9Z9-TP	10	89711899	89711899	Missense_Mutation	PTEN	p.R173C	49
PRAD-EJ-A65E-TP	7	140481402	140481402	Missense_Mutation	BRAF	p.G469A	47
PRAD-G9-6498-TP	7	140481402	140481402	Missense_Mutation	BRAF	p.G469A	47
PRAD-KK-A6E7-TP	10	89717715	89717716	Frame_Shift_Ins	PTEN	p.P248fs	42
PRAD-G9-6366-TP	10	89717713	89717715	In_Frame_Del	PTEN	p.L247del	41
PRAD-HC-A8D0-TP	5	112175949	112175949	Missense_Mutation	APC	p.A1553V	39
PRAD-ZG-A9L0-TP	17	7574003	7574003	Nonsense_Mutation	TP53	p.R342*	39
PRAD-XJ-A9DI-TP	17	7578413	7578413	Missense_Mutation	TP53	p.V173M	36
PRAD-XQ-A8TA-TP	3	10188250	10188250	Missense_Mutation	VHL	p.N131K	34
PRAD-ZG-A9M4-TP	17	7577046	7577046	Nonsense_Mutation	TP53	p.E298*	33
PRAD-V1-A8MJ-TP	17	7578389	7578389	Missense_Mutation	TP53	p.R181C	32
PRAD-YL-A9WY-TP	17	7578400	7578400	Missense_Mutation	TP53	p.P177R	32
PRAD-KC-A4BN-TP	7	140453145	140453145	Missense_Mutation	BRAF	p.L597R	31
PRAD-EJ-7791-TP	10	89720811	89720812	Frame_Shift_Ins	PTEN	p.TK321fs	28
PRAD-XK-AAIW-TP	3	10191469	10191469	Splice_Site	VHL		28
PRAD-HC-7078-TP	3	178921553	178921553	Missense_Mutation	PIK3CA	p.N345K	27
PRAD-HC-7081-TP	3	178921552	178921552	Missense_Mutation	PIK3CA	p.N345I	27
PRAD-HC-7213-TP	17	7578555	7578555	Splice_Site	TP53		26
PRAD-KK-A8II-TP	17	7578555	7578556	Splice_Site	TP53		23
PRAD-EJ-5526-TP	3	178927980	178927980	Missense_Mutation	PIK3CA	p.C420R	21
PRAD-YL-A8SO-TP	5	112174631	112174631	Nonsense_Mutation	APC	p.R1114*	19
PRAD-HC-A6AN-TP	3	178916936	178916936	Missense_Mutation	PIK3CA	p.R108H	18
PRAD-XK-AAIW-TP	3	178916935	178916935	Missense_Mutation	PIK3CA	p.R108C	18
PRAD-FC-7961-TP	10	89717695	89717696	Frame_Shift_Ins	PTEN	p.F241fs	17
PRAD-J9-A8CK-TP	17	7577102	7577102	Missense_Mutation	TP53	p.G279E	17
PRAD-EJ-7315-TP	17	7574018	7574018	Missense_Mutation	TP53	p.R337C	16
PRAD-EJ-A65D-TP	3	178916876	178916876	Missense_Mutation	PIK3CA	p.R88Q	16
PRAD-EJ-A46G-TP	3	10191575	10191575	Missense_Mutation	VHL	p.D190Y	13
PRAD-HC-7230-TP	10	89692849	89692849	Nonsense_Mutation	PTEN	p.W111*	13
PRAD-KK-A7AU-TP	17	7576927	7576927	Splice_Site	TP53		13
PRAD-KK-A8I6-TP	10	89692911	89692911	Missense_Mutation	PTEN	p.G132V	13
PRAD-YL-A8S8-TP	5	112175490	112175490	Nonsense_Mutation	APC	p.S1400*	13
PRAD-KK-A59X-TP	18	48591888	48591888	Missense_Mutation	SMAD4	p.D351Y	12
PRAD-ZG-A8QY-TP	7	140481405	140481405	Missense_Mutation	BRAF	p.F468C	12
PRAD-HC-7233-TP	5	114466299	114466299	Missense_Mutation	TRIM36	p.V608I	10
PRAD-KK-A6E1-TP	10	89692959	89692960	Frame_Shift_Ins	PTEN	p.Q149fs	10
PRAD-XK-AAIW-TP	11	32413578	32413578	Nonsense_Mutation	WT1	p.R246*	10
PRAD-CH-5737-TP	10	89692871	89692871	Missense_Mutation	PTEN	p.V119F	9
PRAD-XK-AAJ3-TP	5	112151261	112151261	Nonsense_Mutation	APC	p.R302*	9
PRAD-HC-7212-TP	10	89720833	89720833	Frame_Shift_Del	PTEN	p.A328fs	8
PRAD-HC-A6AL-TP	10	89692968	89692968	Frame_Shift_Del	PTEN	p.A151fs	8
PRAD-KK-A59V-TP	13	48947629	48947629	Splice_Site	RB1		7
PRAD-YL-A8SJ-TP	17	7578435	7578436	Frame_Shift_Ins	TP53	p.Q165fs	7
PRAD-ZG-A9L2-TP	10	89653814	89653814	Frame_Shift_Del	PTEN	p.P38fs	6
PRAD-2A-A8VT-TP	17	7579592	7579592	Splice_Site	TP53		5
PRAD-EJ-7781-TP	17	7576890	7576890	Frame_Shift_Del	TP53	p.K321fs	5
PRAD-KK-A7AY-TP	18	45368212	45368215	Frame_Shift_Del	SMAD2	p.CS463fs	5
PRAD-KK-A8IF-TP	11	108117798	108117798	Missense_Mutation	ATM	p.R337C	5
PRAD-VP-A87H-TP	12	121416600	121416600	Missense_Mutation	HNF1A	p.T10M	5
PRAD-YL-A9WI-TP	5	112175225	112175231	Frame_Shift_Del	APC	p.GTR1312fs	5
PRAD-EJ-A65D-TP	10	89653846	89653846	Missense_Mutation	PTEN	p.N48K	4
PRAD-HC-7819-TP	5	112175599	112175600	Frame_Shift_Ins	APC	p.K1437fs	4
PRAD-HC-A9TE-TP	17	7578485	7578485	Frame_Shift_Del	TP53	p.S149fs	4
PRAD-KC-A7FA-TP	17	7576851	7576851	Splice_Site	TP53		4
PRAD-KK-A59X-TP	18	48591901	48591901	Missense_Mutation	SMAD4	p.D355V	4
PRAD-KK-A7B4-TP	17	7579315	7579316	Frame_Shift_Ins	TP53	p.C124fs	4
PRAD-XK-AAIW-TP	18	48603092	48603092	Missense_Mutation	SMAD4	p.V465M	4
PRAD-CH-5740-TP	10	89720826	89720826	Missense_Mutation	PTEN	p.D326G	3
PRAD-CH-5753-TP	22	24145587	24145587	Missense_Mutation	SMARCB1	p.D202E	3
PRAD-CH-5791-TP	10	89690802	89690802	Splice_Site	PTEN		3
PRAD-XK-AAIW-TP	17	7579467	7579467	Missense_Mutation	TP53	p.A74T	3
PRAD-CH-5737-TP	11	108205768	108205768	Missense_Mutation	ATM	p.G2695S	2
PRAD-CH-5751-TP	19	16003198	16003198	Missense_Mutation	CYP4F2	p.R149Q	2
PRAD-EJ-7315-TP	18	48591894	48591894	Missense_Mutation	SMAD4	p.Y353N	2
PRAD-J9-A52E-TP	23	15574250	15574250	Missense_Mutation	BMX	p.R670W	2
PRAD-KC-A4BV-TP	10	89711886	89711887	Frame_Shift_Ins	PTEN	p.P169fs	2
PRAD-M7-A725-TP	18	48604655	48604655	Missense_Mutation	SMAD4	p.D493N	2
PRAD-YL-A8HL-TP	17	7577514	7577514	Missense_Mutation	TP53	p.T256I	2
PRAD-2A-A8VO-TP	12	56482346	56482346	Missense_Mutation	ERBB3	p.Q298H	1
PRAD-CH-5769-TP	6	43126631	43126631	Missense_Mutation	PTK7	p.A933V	1
PRAD-CH-5772-TP	10	50835688	50835688	Missense_Mutation	CHAT	p.R323H	1
PRAD-CH-5794-TP	22	30035110	30035110	Missense_Mutation	NF2	p.P91L	1
PRAD-EJ-5511-TP	1	210977309	210977309	Splice_Site	KCNH1	p.K554N	1
PRAD-EJ-5511-TP	11	108192065	108192065	Missense_Mutation	ATM	p.E2164K	1
PRAD-EJ-5518-TP	2	28117448	28117448	Nonsense_Mutation	BRE	p.R9*	1
PRAD-EJ-5525-TP	18	48604690	48604690	Missense_Mutation	SMAD4	p.S504R	1
PRAD-EJ-5525-TP	17	7578242	7578242	Frame_Shift_Del	TP53	p.V203fs	1
PRAD-EJ-5531-TP	16	20554289	20554289	Missense_Mutation	ACSM2B	p.P486S	1
PRAD-EJ-7315-TP	11	7981685	7981685	Missense_Mutation	NLRP10	p.R492C	1
PRAD-EJ-7317-TP	11	44100335	44100335	Splice_Site	ACCS		1
PRAD-EJ-7318-TP	23	154507271	154507271	Missense_Mutation	CLIC2	p.R222H	1
PRAD-EJ-7325-TP	5	112175907	112175907	Nonsense_Mutation	APC	p.S1539*	1
PRAD-EJ-7782-TP	21	47665033	47665033	Missense_Mutation	MCM3AP	p.V1576I	1
PRAD-EJ-A8FS-TP	2	119727707	119727707	Missense_Mutation	MARCO	p.R73W	1
PRAD-FC-A4JI-TP	1	2082320	2082320	Missense_Mutation	PRKCZ	p.R77H	1
PRAD-G9-7525-TP	2	238289893	238289893	Missense_Mutation	COL6A3	p.S521L	1
PRAD-HC-8216-TP	17	7578509	7578509	Missense_Mutation	TP53	p.C141G	1
PRAD-HC-A48F-TP	17	7578509	7578509	Missense_Mutation	TP53	p.C141G	1
PRAD-J4-A83M-TP	2	179635207	179635207	Missense_Mutation	TTN	p.I2771T	1
PRAD-J9-A52C-TP	17	36895857	36895857	Missense_Mutation	PCGF2	p.R64Q	1
PRAD-KK-A59V-TP	2	61175177	61175177	Splice_Site	PUS10		1
PRAD-KK-A59V-TP	15	84581902	84581902	Missense_Mutation	ADAMTSL3	p.R587C	1
PRAD-KK-A59V-TP	10	89550131	89550132	Frame_Shift_Del	ATAD1	p.T106fs	1
PRAD-KK-A6E2-TP	10	48389662	48389662	Missense_Mutation	RBP3	p.E406K	1
PRAD-KK-A6E4-TP	6	42204105	42204106	In_Frame_Ins	TRERF1	p.967_968insE	1
PRAD-KK-A6E8-TP	16	68855984	68855984	Missense_Mutation	CDH1	p.R598G	1
PRAD-MG-AAMC-TP	11	21555934	21555934	Missense_Mutation	NELL1	p.S554P	1
PRAD-V1-A9OQ-TP	6	152461140	152461140	Missense_Mutation	SYNE1	p.R8468H	1
PRAD-V1-A9ZR-TP	3	47144908	47144908	Missense_Mutation	SETD2	p.I1615M	1
PRAD-VN-A88K-TP	11	108200991	108200991	Missense_Mutation	ATM	p.R2453P	1
PRAD-VP-A87E-TP	6	146720225	146720225	Missense_Mutation	GRM1	p.R684C	1
PRAD-XJ-A83G-TP	1	198711392	198711392	Missense_Mutation	PTPRC	p.G863R	1
PRAD-XJ-A9DX-TP	5	55251876	55251876	Missense_Mutation	IL6ST	p.T415I	1
PRAD-XK-AAIW-TP	11	64575422	64575422	Missense_Mutation	MEN1	p.H204Y	1
PRAD-XK-AAIW-TP	20	42331427	42331427	Missense_Mutation	MYBL2	p.R417C	1
PRAD-XK-AAIW-TP	4	1807829	1807829	Missense_Mutation	FGFR3	p.V630M	1
PRAD-XK-AAIW-TP	6	82922423	82922423	Splice_Site	IBTK		1
PRAD-XK-AAIW-TP	12	11061452	11061452	Missense_Mutation	TAS2R13	p.N149S	1
PRAD-XK-AAIW-TP	3	10219625	10219625	Missense_Mutation	IRAK2	p.M66I	1
PRAD-XK-AAIW-TP	1	22902839	22902839	Missense_Mutation	EPHA8	p.V97I	1
PRAD-XK-AAIW-TP	11	94231249	94231249	Missense_Mutation	ANKRD49	p.R91W	1
PRAD-XK-AAIW-TP	12	49237828	49237828	Missense_Mutation	DDX23	p.R72Q	1
PRAD-XK-AAIW-TP	7	103126834	103126834	Missense_Mutation	RELN	p.L3265I	1
PRAD-XK-AAIW-TP	7	42005853	42005853	Missense_Mutation	GLI3	p.P940S	1
PRAD-XQ-A8TA-TP	5	112175856	112175856	Nonsense_Mutation	APC	p.L1522*	1
PRAD-YL-A8SF-TP	6	44387289	44387289	Missense_Mutation	CDC5L	p.R399Q	1
PRAD-ZG-A8QX-TP	11	64575501	64575501	Missense_Mutation	MEN1	p.D177E	1
PRAD-ZG-A9KY-TP	9	94486381	94486381	Missense_Mutation	ROR2	p.P799A	1
PRAD-ZG-A9L9-TP	1	177001904	177001904	Missense_Mutation	ASTN1	p.R185W	1
PRAD-ZG-A9LB-TP	3	41266227	41266227	Missense_Mutation	CTNNB1	p.T75I	1
PRAD-ZG-A9ND-TP	2	48027960	48027960	Missense_Mutation	MSH6	p.E946D	1
