gene1	gene2	pval	qval
KEL	Del_10p15.3	0.000791	1
TP53	Del_1p36.31	0.000923	1
CPA3	Amp_7q34	0.00163	1
FGFR2	Del_10q23.31	0.00197	1
FGFR2	Del_10q26.3	0.00247	1
TTN	Amp_5p15.33	0.00255	1
TTN	6p-Del	0.00263	1
BRAF	KIT	0.00269	1
BRAF	Amp_6p24.3	0.00299	1
SLC38A4	9p-Del	0.00326	1
FLT1	Del_10p15.3	0.00358	1
TP53	Del_9p21.3	0.00415	1
BRAF	NF1	0.00418	1
TPTE	Amp_11q13.3	0.00428	1
FGFR2	10p-Del	0.00456	1
NUP214	10p-Del	0.0047	1
DCLK3	10q-Del	0.00477	1
FGFR2	10q-Del	0.00477	1
ANO4	10p-Del	0.00479	1
ANO4	Del_10q23.31	0.00512	1
RAC1	Del_9p23	0.00524	1
CTNNA3	Del_10p15.3	0.0054	1
CPA3	7p-Amp	0.00561	1
DMC1	Del_10q23.31	0.00563	1
ANO4	10q-Del	0.00568	1
KEL	10p-Del	0.00601	1
ANO4	Del_10q21.1	0.00614	1
BRAF	Del_11q23.3	0.0063	1
DMC1	Del_10q26.3	0.00637	1
BRAF	6p-Amp	0.0067	1
APC	10q-Del	0.00674	1
ANO4	Del_10q26.3	0.00682	1
BRAF	Amp_17q25.3	0.00689	1
CTNNA3	10q-Del	0.007	1
DCLK3	Amp_1q44	0.007	1
NRAS	7p-Amp	0.00709	1
XIRP2	Del_5p15.31	0.00745	1
BRAF	Amp_1p12	0.00757	1
EPHA6	Del_10q21.1	0.00786	1
HSD11B1	Del_9p21.3	0.00821	1
C7orf58	Amp_22q13.2	0.0083	1
DCLK3	Del_10q23.31	0.00834	1
CTNNA3	10p-Del	0.00843	1
MYO3B	Amp_8q24.21	0.00859	1
KEL	1q-Amp	0.00896	1
BRAF	Amp_1q44	0.00909	1
DMC1	10q-Del	0.00914	1
USH2A	Del_1p22.1	0.00916	1
NF1	Del_10q26.3	0.00956	1
CPA3	7q-Amp	0.0097	1
THSD7B	18p-Del	0.00984	1
KEL	Amp_1q44	0.00985	1
MSTN	Del_10q26.3	0.0102	1
CTNNA3	Del_10q23.31	0.0104	1
CYP3A4	Amp_1q44	0.0104	1
MYO3B	Amp_5p15.33	0.0106	1
DCLK3	Del_10q21.1	0.0109	1
EPHA4	Amp_7q34	0.0109	1
FGFR2	Del_10q21.1	0.0109	1
BRAF	PDGFRA	0.0111	1
BRAF	Del_5p15.31	0.0111	1
NRAS	7q-Amp	0.0114	1
CTNNA3	Amp_6p24.3	0.0116	1
CTNNA3	Del_15q21.1	0.0116	1
FGFR2	Del_9p21.3	0.0116	1
MAP2K1	Del_11q23.3	0.0116	1
DCLK3	Amp_1q21.3	0.0117	1
APC	Del_10q23.31	0.0118	1
FGFR2	Del_14q23.3	0.0118	1
20p-Amp	Del_16q12.1	0.0118	1
SLC9A11	Amp_8q24.21	0.0119	1
HSD11B1	9p-Del	0.012	1
RELN	Del_5p15.31	0.0124	1
GLI1	NRAS	0.0125	1
CTNNA3	Del_10q26.3	0.0127	1
C7orf58	Amp_3p13	0.0131	1
SLC38A4	Amp_8q24.21	0.0131	1
FGFR2	Del_9p23	0.0132	1
THSD7B	Del_5p15.31	0.0134	1
SLC38A4	Del_9p21.3	0.0137	1
Amp_7q34	Del_5p15.31	0.0138	1
PTPN22	Del_14q23.3	0.014	1
MSTN	10q-Del	0.0141	1
APC	Del_10q26.3	0.0142	1
NRAS	Del_1p22.1	0.0142	1
DMC1	Del_10q21.1	0.0145	1
BRAF	1q-Amp	0.0146	1
LGR6	Del_9p21.3	0.0146	1
APC	Del_10q21.1	0.0147	1
CTNNA3	Del_4q34.3	0.0149	1
Amp_3p13	Del_1p36.31	0.0149	1
BRAF	IDH1	0.0153	1
EPHA6	Del_10q26.3	0.0154	1
TP53	Amp_1q44	0.0154	1
THSD7B	6p-Del	0.0155	1
PTPN11	Del_6q26	0.0157	1
FLT1	Amp_7q34	0.0158	1
NRAS	Del_2q37.3	0.016	1
TP63	6p-Del	0.016	1
CTNNA3	Del_10q21.1	0.0162	1
MYO16	Del_1p22.1	0.0165	1
NAP1L2	Del_14q23.3	0.0166	1
DDX3X	6q-Del	0.0171	1
RAC1	6q-Del	0.0171	1
ACSBG1	Amp_1q21.3	0.0174	1
NF1	Del_10q21.1	0.0174	1
TRERF1	20q-Amp	0.0174	1
USP17L2	Amp_20q13.33	0.0174	1
TP53	Del_1p22.1	0.0175	1
KEL	Amp_1q21.3	0.0177	1
BRAF	RB1	0.0181	1
HSD11B1	Del_9p23	0.0188	1
NF1	10q-Del	0.0192	1
THSD7B	Del_10q26.3	0.0193	1
DCLK3	10p-Del	0.0194	1
FLT1	Del_14q23.3	0.0194	1
APCS	Amp_8q24.21	0.0197	1
TP63	Amp_6q12	0.0197	1
CTNNA3	8q-Amp	0.0198	1
SLC9A11	6p-Amp	0.02	1
BRAF	11q-Del	0.0203	1
DMC1	10p-Del	0.0203	1
MPP7	Del_10q26.3	0.0205	1
PTPN11	Del_6q21	0.0207	1
ARID2	20p-Amp	0.0208	1
FGFR2	14q-Del	0.0208	1
LGR6	Del_6q21	0.0211	1
MSTN	Del_10q21.1	0.0215	1
APC	Del_8p23.3	0.0217	1
PTPN22	Del_8p23.3	0.0217	1
Amp_1q44	Del_12q23.3	0.0217	1
BRAF	Amp_13q31.3	0.0219	1
FLT1	Amp_8q24.21	0.0222	1
PTPN22	Amp_7p22.1	0.0222	1
TTN	8q-Amp	0.0222	1
USH2A	Amp_6q12	0.023	1
KEL	20p-Amp	0.0232	1
C10orf54	Del_10q23.31	0.0237	1
MSTN	Del_10p15.3	0.0238	1
ZNF780B	Del_10p15.3	0.0238	1
OR4S2	Amp_6p24.3	0.0239	1
PTPN22	14q-Del	0.0241	1
TTN	Del_5p15.31	0.0241	1
GUCY2F	Amp_8q24.21	0.0243	1
RELN	Amp_3p13	0.0244	1
RAC1	9p-Del	0.0245	1
MLL	6q-Del	0.0248	1
NUP214	Del_10q21.1	0.0248	1
FGFR2	9p-Del	0.0249	1
PPP6C	Amp_20q13.33	0.0255	1
TTN	Amp_4q12	0.0255	1
OR4S2	Amp_1q44	0.0257	1
RAC1	Del_10q23.31	0.0264	1
CNTN5	8q-Amp	0.0265	1
6p-Amp	6p-Del	0.0275	1
FGFR2	Amp_1q44	0.0279	1
NAP1L2	14q-Del	0.0281	1
22q-Amp	Del_5q12.1	0.0281	1
NUP214	Del_10p15.3	0.0282	1
FLT1	Del_10q21.1	0.0287	1
MAP2K1	Del_10q23.31	0.029	1
MSTN	10p-Del	0.0292	1
ZNF780B	10p-Del	0.0292	1
IDH1	11q-Del	0.03	1
NUP214	11q-Del	0.03	1
CDC42BPA	Amp_7p22.1	0.0301	1
FLT1	Amp_1q44	0.0303	1
KRAS	Del_9p23	0.0303	1
SLC38A4	Del_14q23.3	0.0303	1
CDKN2A	Amp_13q31.3	0.0304	1
RAC1	Del_10q26.3	0.0305	1
SLC9A11	8q-Amp	0.0306	1
ANO4	Amp_3p13	0.0307	1
SLC38A4	Del_9p23	0.0307	1
PARM1	Amp_22q13.2	0.0308	1
KEL	8q-Amp	0.031	1
DSG3	Del_6q26	0.0313	1
TTN	Amp_11q13.3	0.0313	1
NRAS	Amp_4q12	0.0319	1
DCLK3	Del_10q26.3	0.0322	1
EPHA7	20p-Amp	0.0325	1
SLC38A4	18p-Del	0.0325	1
TTN	Del_3q13.31	0.0328	1
USP17L2	20q-Amp	0.0334	1
C10orf54	10q-Del	0.0336	1
NF1	10p-Del	0.0336	1
DCLK3	8q-Amp	0.0337	1
OR4S2	Amp_7q34	0.0337	1
THSD7B	8q-Amp	0.0337	1
BRAF	Amp_11q13.3	0.0338	1
MSTN	Amp_6p24.3	0.0338	1
EPHA6	10q-Del	0.0341	1
MAP2K1	Amp_1q44	0.0344	1
TP53	Amp_12q14.1	0.0345	1
DSG3	Del_12q23.3	0.0346	1
MPP7	Del_10p15.3	0.0348	1
SLC9A11	Amp_5p15.33	0.0355	1
PTPN22	Amp_1q44	0.0357	1
CYP3A4	10p-Del	0.0358	1
BRAF	Del_12q23.3	0.036	1
9q-Del	Amp_20q13.33	0.0361	1
CTNNA3	7q-Amp	0.0365	1
XIRP2	Amp_11q13.3	0.0368	1
FLT1	14q-Del	0.0369	1
DCLK3	Del_9p23	0.037	1
XIRP2	Del_10p15.3	0.0371	1
6p-Amp	Del_5q31.3	0.0371	1
ALPK2	Del_16p13.3	0.0373	1
ARID2	Amp_20q13.33	0.0378	1
CTNNA3	6p-Amp	0.0381	1
SLC9A11	Amp_3p13	0.0381	1
LGR6	Del_14q23.3	0.0389	1
RAC1	Del_14q23.3	0.0389	1
THSD7B	Amp_12q14.1	0.0394	1
RELN	Amp_5p15.33	0.0396	1
CTNNA3	Del_13q34	0.04	1
APC	8q-Amp	0.0401	1
THSD7B	Del_10q21.1	0.0403	1
KCND2	18p-Del	0.0405	1
BRAF	11p-Del	0.0407	1
SLC9A11	Del_15q13.3	0.0408	1
EPHA7	Amp_8q24.21	0.042	1
FLT1	7q-Amp	0.042	1
RB1	Del_9p21.3	0.0421	1
RB1	Del_9p23	0.0424	1
C15orf23	Del_16q23.1	0.0426	1
THSD7B	Amp_13q31.3	0.0426	1
EPHA4	Del_15q13.3	0.0428	1
FGFR2	9q-Del	0.0431	1
FGFR2	Del_10p15.3	0.0431	1
20p-Amp	9q-Del	0.0431	1
CYP3A4	Del_9p21.3	0.0436	1
RAC1	Del_9p21.3	0.0436	1
KEL	Amp_22q13.2	0.0438	1
1q-Amp	Del_12q23.3	0.0438	1
MPP7	Del_10q23.31	0.044	1
ALPK2	18p-Del	0.045	1
DDX3X	Del_6q26	0.0451	1
LGR6	Del_6q26	0.0451	1
RAC1	Del_6q26	0.0451	1
ZNF780B	Amp_1q21.3	0.0452	1
7p-Amp	Del_5p15.31	0.0452	1
Amp_13q31.3	Del_5q31.3	0.0456	1
CNTN5	Amp_7p22.1	0.0458	1
20q-Amp	Del_16q12.1	0.0458	1
PPP6C	20q-Amp	0.046	1
17p-Del	Amp_6q12	0.046	1
C15orf23	Del_16q12.1	0.0461	1
CYP3A4	10q-Del	0.0464	1
RAC1	10q-Del	0.0464	1
CNTN5	Del_5q31.3	0.0467	1
EPHA4	Del_15q21.1	0.0467	1
NF1	Amp_11q13.3	0.0467	1
OR4S2	Amp_7p22.1	0.0469	1
C10orf54	Del_10q21.1	0.047	1
CTNNA3	Del_14q23.3	0.047	1
RPTN	Amp_3p13	0.047	1
MAP2K1	Amp_1q21.3	0.0472	1
USH2A	Del_5p15.31	0.0472	1
MAP2K1	10q-Del	0.0474	1
COL3A1	Amp_11q13.3	0.0476	1
USP17L2	Del_1p36.31	0.0481	1
APCS	Del_10q21.1	0.0482	1
PTPN22	Del_9p21.3	0.0483	1
IGF1R	11q-Del	0.0484	1
MYO16	Del_3q13.31	0.0484	1
SLC38A4	Del_3q13.31	0.0484	1
SLC38A4	Del_19p13.3	0.0484	1
NAP1L2	Del_10q23.31	0.0493	1
CTNNA3	Del_9p21.3	0.0495	1
SLC38A4	8q-Amp	0.0496	1
PDGFRA	Amp_7q34	0.0497	1
CDKN2A	13q-Amp	0.0499	1
LGR6	Del_15q13.3	0.05	1
6q-Del	Amp_15q26.2	0.0502	1
ANO4	Del_10p15.3	0.0505	1
KYNU	11p-Del	0.0508	1
Amp_11q13.3	Del_5q12.1	0.0509	1
C10orf54	Del_10p15.3	0.051	1
DCLK3	Amp_8q24.21	0.051	1
NUDT11	Del_10p15.3	0.051	1
PTPN11	Del_10p15.3	0.051	1
CNTN5	Amp_12q14.1	0.0513	1
IGF1R	7q-Amp	0.0513	1
BRAF	Amp_6q12	0.0514	1
EPHA4	7q-Amp	0.0514	1
FLT1	10p-Del	0.052	1
Amp_20q13.33	Del_16q23.1	0.052	1
BRAF	20p-Amp	0.0523	1
EPHA6	Del_15q21.1	0.0526	1
TRERF1	Amp_20q13.33	0.0528	1
CNTN5	Del_3q13.31	0.0531	1
RPTN	Amp_1q44	0.0536	1
C7orf58	6p-Amp	0.0537	1
6p-Amp	Del_5q12.1	0.0537	1
PTPN22	Amp_1q21.3	0.0538	1
PARM1	Amp_5p15.33	0.054	1
SLC38A4	14q-Del	0.054	1
MAN1A1	Del_16q24.3	0.0541	1
NUP214	8q-Amp	0.0541	1
LGR6	Del_15q21.1	0.0543	1
MAP2K1	Amp_20q13.33	0.0543	1
NF1	Del_10p15.3	0.0543	1
BRAF	Amp_12q15	0.0545	1
RPTN	Amp_12q14.1	0.0545	1
MLL	Del_16q24.3	0.055	1
NRAS	OXA1L	0.0553	1
KEL	Amp_11q13.3	0.0555	1
TTN	Del_15q21.1	0.0555	1
THSD7B	Amp_11q13.3	0.0559	1
XIRP2	18p-Del	0.0565	1
FRMPD4	Del_5p15.31	0.0566	1
MYO3B	Del_5p15.31	0.0566	1
DSG3	PTEN	0.0567	1
20q-Amp	9q-Del	0.0568	1
MLL	Del_6q26	0.0569	1
CTNNA3	PTEN	0.0574	1
GUCY2F	Amp_6p24.3	0.0574	1
NBPF1	11q-Del	0.0574	1
EPHA7	Amp_1q44	0.0577	1
CTNNA3	20q-Amp	0.0578	1
SLC38A4	Del_10q21.1	0.0581	1
20q-Amp	9p-Del	0.0583	1
C15orf23	Del_15q13.3	0.0584	1
CDKN2A	Amp_12q14.1	0.0587	1
CTNNA3	Del_6q21	0.0587	1
KCND2	Del_3q13.31	0.0588	1
KCND2	Del_19p13.3	0.0588	1
LGR6	14q-Del	0.059	1
RAC1	14q-Del	0.059	1
KRAS	9p-Del	0.0592	1
ALPK2	Del_14q23.3	0.0594	1
Amp_11q13.3	Del_10q23.31	0.0594	1
Amp_20q13.33	Del_16q12.1	0.0594	1
IGF1R	NRAS	0.0595	1
USH2A	6p-Del	0.0598	1
C10orf54	10p-Del	0.0599	1
MAP2K1	Del_6q26	0.0599	1
PTPN11	10p-Del	0.0599	1
FGFR2	Amp_7p22.1	0.0601	1
MAP2K1	Amp_7p22.1	0.0602	1
5q-Del	Amp_11q13.3	0.0605	1
NAP1L2	Del_10q21.1	0.0607	1
DSG3	Del_6q21	0.0608	1
KEL	Amp_8q24.21	0.0608	1
SLC38A4	11p-Del	0.061	1
STK19	Amp_1q44	0.061	1
ARID2	Del_1p22.1	0.0612	1
KRT73	11q-Del	0.0615	1
NUP214	11p-Del	0.0615	1
FAM58A	Del_9p21.3	0.0616	1
KRAS	Del_9p21.3	0.0616	1
LGR6	Del_9p23	0.0616	1
RB1	9q-Del	0.062	1
EPHA6	Del_5q31.3	0.0621	1
BRAF	17p-Del	0.0623	1
BRAF	Amp_5p15.33	0.0623	1
LGR6	Amp_7q34	0.0623	1
KCND2	Del_8p23.3	0.0624	1
FGFR2	Del_2q37.3	0.0626	1
NBPF1	18p-Del	0.0626	1
SLC38A4	11q-Del	0.0626	1
8p-Amp	Del_13q34	0.0628	1
C15orf23	Del_15q21.1	0.0632	1
TP53	Del_6q26	0.0632	1
17p-Del	Amp_12q14.1	0.0633	1
MYO3B	22q-Amp	0.0635	1
USP9X	Del_10p15.3	0.0635	1
CTNNA3	Del_15q13.3	0.064	1
LGR6	Del_1p36.31	0.064	1
LGR6	Del_4q34.3	0.064	1
PPP6C	Del_1p36.31	0.064	1
RELN	22q-Amp	0.0647	1
BTK	6q-Del	0.065	1
ZFX	6q-Del	0.065	1
Amp_6p24.3	Del_1p22.1	0.0651	1
MSTN	Del_10q23.31	0.0652	1
USH2A	Amp_5p15.33	0.0652	1
IDH1	10q-Del	0.0653	1
ATP5F1	Del_10q26.3	0.0654	1
DCLK3	9p-Del	0.0655	1
IDH1	Amp_22q13.2	0.0655	1
MAN1A1	Amp_22q13.2	0.0655	1
20p-Amp	Del_16q23.1	0.0655	1
MLL	Amp_1p12	0.0661	1
7p-Amp	Amp_3p13	0.0663	1
CDKN2A	Del_8p23.3	0.0665	1
CTNNB1	SLC9A11	0.0665	1
DDX3X	Del_6q21	0.0665	1
RAC1	Del_6q21	0.0665	1
CYP3A4	Amp_1q21.3	0.0666	1
DDX3X	Del_5q31.3	0.0671	1
KCND2	8q-Amp	0.0672	1
SLC38A4	10q-Del	0.0677	1
NUP214	Amp_8q24.21	0.0688	1
USP17L2	Amp_17q25.3	0.0688	1
KEL	Del_10q21.1	0.069	1
USH2A	Del_1p36.31	0.069	1
APC	6p-Amp	0.0691	1
6p-Amp	6q-Del	0.0695	1
APC	Del_2q37.3	0.0697	1
POTEG	Del_5p15.31	0.0697	1
TRERF1	20p-Amp	0.0697	1
6p-Amp	5q-Del	0.07	1
NAP1L2	Del_10p15.3	0.0702	1
NAP1L2	Del_13q34	0.0702	1
22q-Amp	Del_12q23.3	0.0702	1
EPHA4	Del_9p21.3	0.0706	1
BRAF	Amp_1q21.3	0.0708	1
LGR6	6q-Del	0.0711	1
RELN	Amp_12q14.1	0.0713	1
XIRP2	Amp_5p15.33	0.0713	1
EPHA7	6p-Del	0.0717	1
CNTN5	7p-Amp	0.0719	1
22q-Amp	6q-Del	0.0719	1
XIRP2	8q-Amp	0.072	1
ALPK2	Del_19p13.3	0.0723	1
Amp_22q13.2	Del_3q13.31	0.0723	1
NAP1L2	Del_9p21.3	0.0726	1
DCLK3	Del_9p21.3	0.0728	1
CNTN5	11q-Del	0.0731	1
THSD7B	Amp_8q24.21	0.0734	1
TP53	Del_9p23	0.074	1
DMC1	1q-Amp	0.0742	1
APC	Del_6q21	0.0743	1
7q-Amp	Del_5p15.31	0.0744	1
APC	10p-Del	0.0745	1
EPHA6	Amp_11q13.3	0.0746	1
MAP2K1	Del_10q21.1	0.0749	1
SLC38A4	16q-Del	0.0754	1
TP53	6q-Del	0.0754	1
CYP3A4	Amp_8q24.21	0.0759	1
LGR6	Amp_8q24.21	0.0759	1
XIRP2	10p-Del	0.076	1
CTNNA3	Amp_8q24.21	0.0761	1
MAP2K1	Del_14q23.3	0.0761	1
BRAF	13q-Amp	0.0765	1
MLL	Del_10q26.3	0.0769	1
NUP214	Amp_7p22.1	0.0769	1
SLC38A4	Del_10q23.31	0.077	1
THSD7B	1q-Amp	0.077	1
APC	8p-Amp	0.0773	1
USH2A	Del_3q13.31	0.0774	1
MPP7	Amp_22q13.2	0.0775	1
NAP1L2	20p-Amp	0.0776	1
CYP3A4	Del_10q21.1	0.0777	1
RAC1	Del_10q21.1	0.0777	1
CTNNA3	14q-Del	0.0783	1
TP53	Del_15q13.3	0.0787	1
USP17L2	Del_9p23	0.0787	1
PARM1	Amp_7q34	0.0788	1
HSD11B1	Amp_20q13.33	0.079	1
STK19	Amp_20q13.33	0.079	1
STK19	Amp_22q13.2	0.079	1
ARID2	Amp_12q14.1	0.0791	1
FLT1	Del_10q23.31	0.0791	1
KEL	Del_10q23.31	0.0791	1
XIRP2	Del_10q21.1	0.0791	1
IDH1	SLC9A11	0.0792	1
NUP214	6p-Amp	0.0792	1
ALPK2	Del_6q26	0.0796	1
C7orf58	1q-Amp	0.0796	1
STK19	9q-Del	0.0796	1
CYP3A4	Del_10q23.31	0.0798	1
Amp_6q12	Del_10q23.31	0.0798	1
TTN	18p-Del	0.0799	1
USP9X	10p-Del	0.08	1
MYO3B	Del_15q21.1	0.0803	1
ACSBG1	Del_16q24.3	0.0806	1
APCS	8q-Amp	0.0806	1
BRAF	8q-Amp	0.0807	1
13q-Amp	Del_5q31.3	0.0811	1
CDKN2A	Amp_15q26.2	0.0813	1
NBPF1	Del_10q26.3	0.0813	1
DDX3X	SLC38A4	0.0817	1
EPHA6	5q-Del	0.0817	1
TTN	Del_16p13.3	0.0817	1
CTNNA3	Amp_13q31.3	0.0821	1
CTNNA3	Del_6q26	0.0822	1
Amp_3p13	Del_6q26	0.0822	1
MAP2K1	Del_6q21	0.0829	1
20q-Amp	Del_9p23	0.0829	1
ARID2	20q-Amp	0.0839	1
ARID2	Amp_5p15.33	0.0839	1
BRAF	Del_15q13.3	0.084	1
CNTN5	7q-Amp	0.0841	1
SLC9A11	Del_14q23.3	0.0842	1
MAN1A1	Del_16q23.1	0.0843	1
ZFX	Del_6q26	0.0847	1
MPP7	10q-Del	0.0852	1
PTPN22	9p-Del	0.0853	1
CAMTA1	Del_5p15.31	0.0857	1
NAP1L2	Del_5p15.31	0.0857	1
PTEN	TRERF1	0.0857	1
ANO4	Amp_5p15.33	0.0859	1
CNTN5	Amp_7q34	0.0859	1
C15orf23	16q-Del	0.0862	1
CPA3	Amp_7p22.1	0.0862	1
BRAF	EPHA4	0.0864	1
FGFR2	Del_3q13.31	0.0864	1
KCND2	11q-Del	0.0864	1
POTEG	Del_3q13.31	0.0864	1
CTNNA3	Del_1p36.31	0.0865	1
FLT1	Amp_3p13	0.0865	1
20p-Amp	Del_9p23	0.0865	1
EPHA6	10p-Del	0.0867	1
MAP2K1	20q-Amp	0.0868	1
NAP1L2	10q-Del	0.087	1
RAC1	Del_10p15.3	0.0877	1
THSD7B	Del_2q37.3	0.088	1
PTPN11	6q-Del	0.0882	1
HSD11B1	Amp_8q24.21	0.0883	1
RPTN	Amp_1q21.3	0.0883	1
CDC42BPA	10p-Del	0.0884	1
FRMPD4	Del_5q12.1	0.0884	1
MSTN	Del_9p21.3	0.0885	1
LGR6	Del_1p22.1	0.0886	1
PPP6C	Del_1p22.1	0.0886	1
SLC38A4	9q-Del	0.0886	1
Amp_6q12	Del_1p22.1	0.0886	1
KCND2	Amp_20q13.33	0.0889	1
KCND2	Amp_22q13.2	0.0889	1
C15orf23	6q-Del	0.089	1
TPTE	8q-Amp	0.089	1
THSD7B	Del_15q21.1	0.0892	1
CTNNA3	Amp_7p22.1	0.0893	1
C15orf23	Del_6q21	0.0897	1
CYP3A4	Del_10q26.3	0.0898	1
MAN1A1	Del_16q12.1	0.0898	1
NUP214	Del_14q23.3	0.0898	1
RELN	5q-Del	0.0898	1
ZFX	Del_14q23.3	0.0898	1
CDKN2A	Del_5p15.31	0.0899	1
IGF1R	11p-Del	0.0901	1
SLC38A4	Del_10q26.3	0.0901	1
TTN	Del_10q26.3	0.0901	1
MYO3B	8q-Amp	0.0902	1
NRAS	Del_10q26.3	0.0905	1
USP17L2	Amp_1q44	0.0905	1
EPHA7	6p-Amp	0.0907	1
C10orf54	Amp_8q24.21	0.0916	1
NF1	Del_5q31.3	0.0917	1
XIRP2	Del_1p22.1	0.092	1
9p-Del	Amp_20q13.33	0.092	1
RB1	9p-Del	0.0922	1
CTNNA3	Amp_11q13.3	0.0924	1
EPHA4	8q-Amp	0.0925	1
FLT1	1q-Amp	0.0925	1
TP63	Amp_11q13.3	0.0925	1
NAP1L2	10p-Del	0.0928	1
CTNNB1	NRAS	0.093	1
CTNNA3	11p-Del	0.0932	1
FLT1	Del_10q26.3	0.0932	1
SELP	Amp_17q25.3	0.0936	1
SLC38A4	Del_1p22.1	0.0936	1
FGFR2	Del_15q13.3	0.094	1
NBPF1	Del_15q13.3	0.094	1
SLC9A11	Amp_7p22.1	0.094	1
KEL	20q-Amp	0.0942	1
17p-Del	Del_1p36.31	0.0942	1
KRTAP5-10	1q-Amp	0.0945	1
THSD7B	13q-Amp	0.0945	1
CDKN2A	6p-Amp	0.0947	1
TTN	Amp_22q13.2	0.0948	1
APC	Del_19p13.3	0.095	1
ARID2	10p-Del	0.095	1
MAP2K1	Del_9p23	0.095	1
PTPN22	Del_3q13.31	0.095	1
NAP1L2	Del_5q31.3	0.0951	1
THSD7B	10q-Del	0.0951	1
FLT1	8q-Amp	0.0952	1
Amp_1q21.3	Del_12q23.3	0.0954	1
EPHA7	10p-Del	0.0956	1
SLC38A4	10p-Del	0.0956	1
CBL	Del_10q23.31	0.0958	1
MAP2K1	7p-Amp	0.0959	1
KCND2	Amp_6q12	0.096	1
XIRP2	10q-Del	0.0966	1
CNTN5	6p-Del	0.0969	1
CNTN5	Amp_11q13.3	0.0969	1
C7orf58	Amp_1q21.3	0.097	1
22q-Amp	Del_6q21	0.097	1
CNTN5	14q-Del	0.0976	1
HSD11B1	Amp_7p22.1	0.0978	1
STK19	Amp_7p22.1	0.0978	1
IGF1R	Amp_7q34	0.0979	1
TRERF1	Amp_5p15.33	0.0979	1
8p-Amp	17p-Del	0.0979	1
10q-Del	Amp_11q13.3	0.0979	1
OR4S2	Del_1p36.31	0.098	1
RELN	Amp_6p24.3	0.0981	1
OR4S2	1q-Amp	0.0986	1
KRTAP5-10	Del_11q23.3	0.0987	1
NUDT11	Amp_7p22.1	0.0987	1
XIRP2	Amp_8q24.21	0.0987	1
APC	Amp_1q44	0.0989	1
IDH1	Del_10q21.1	0.0989	1
PDGFRA	Amp_1q44	0.0989	1
KYNU	Del_8p23.3	0.0991	1
MAP2K1	NF1	0.0991	1
PTEN	Del_11q23.3	0.0993	1
NRAS	Del_4p16.3	0.0995	1
DMC1	Del_10p15.3	0.0996	1
EPHA6	Del_10q23.31	0.0996	1
MYO16	Del_16q23.1	0.0998	1
SLC38A4	Del_16q23.1	0.0998	1
NF1	Del_10q23.31	0.1	1
BRAF	Amp_20q13.33	0.101	1
FRMPD4	6p-Del	0.101	1
KRT73	Amp_6p24.3	0.101	1
MYO3B	6p-Del	0.101	1
MYO3B	Amp_11q13.3	0.101	1
THSD7B	Amp_7p22.1	0.101	1
C7orf58	11p-Del	0.102	1
CTNNA3	Amp_20q13.33	0.102	1
FRMPD4	Del_9p23	0.102	1
MAN1A1	Amp_5p15.33	0.102	1
CBL	Del_10q26.3	0.103	1
FGFR2	Del_15q21.1	0.103	1
MAP2K1	10p-Del	0.103	1
NBPF1	Del_15q21.1	0.103	1
RB1	Del_10q26.3	0.103	1
CDKN2A	Amp_1q21.3	0.104	1
CPA3	Amp_3p13	0.104	1
LGR6	Amp_3p13	0.104	1
NAP1L2	Del_3q13.31	0.104	1
NF1	14q-Del	0.104	1
SELP	Amp_8q24.21	0.104	1
TRERF1	Del_10q26.3	0.104	1
XIRP2	6p-Del	0.104	1
8q-Amp	Del_13q34	0.104	1
CTNNA3	Amp_1q44	0.105	1
TPTE	Amp_8q24.21	0.105	1
ANO4	Amp_13q31.3	0.106	1
ARID2	MAP2K1	0.106	1
EPHA6	Del_10p15.3	0.106	1
GLI1	Amp_1q44	0.106	1
MAP2K1	14q-Del	0.106	1
SLC38A4	Del_16p13.3	0.106	1
STK19	Del_14q23.3	0.106	1
TRERF1	Del_9p21.3	0.106	1
14q-Del	Amp_15q26.2	0.106	1
FGFR2	Amp_7q34	0.107	1
FRMPD4	5q-Del	0.107	1
MAP2K1	Del_10q26.3	0.107	1
MYO3B	5q-Del	0.107	1
RELN	Amp_15q26.2	0.107	1
THSD7B	10p-Del	0.107	1
TP53	Amp_11q13.3	0.107	1
USP17L2	20p-Amp	0.107	1
USP17L2	Del_9p21.3	0.107	1
BTK	Amp_1p12	0.108	1
FAM58A	Del_10p15.3	0.108	1
IDH1	Amp_1p12	0.108	1
XIRP2	Del_15q21.1	0.108	1
ZNF780B	Del_5q31.3	0.108	1
BRAF	DMC1	0.109	1
CYP3A4	8q-Amp	0.109	1
KEL	Del_13q34	0.109	1
KRT73	11p-Del	0.109	1
LGR6	8q-Amp	0.109	1
APC	Del_6q26	0.11	1
EPHA6	Del_5p15.31	0.11	1
PDGFRA	Del_6q26	0.11	1
SELP	Del_14q23.3	0.11	1
TPTE	Del_15q21.1	0.11	1
Amp_8q24.21	Del_13q34	0.11	1
BRAF	Amp_12q14.1	0.111	1
CAMTA1	Amp_5p15.33	0.111	1
OR4S2	7q-Amp	0.111	1
PTEN	17p-Del	0.111	1
RAC1	10p-Del	0.111	1
TTN	Del_8p23.3	0.111	1
ALPK2	14q-Del	0.112	1
ARID2	18p-Del	0.112	1
BRAF	EPHA6	0.112	1
BRAF	POTEG	0.112	1
C7orf58	Del_2q37.3	0.112	1
TP53	Del_6q21	0.113	1
ZFX	Del_6q21	0.113	1
Amp_1q44	Del_16q12.1	0.113	1
CNTN5	Del_4q34.3	0.114	1
BTK	Del_8p23.3	0.115	1
BTK	Del_15q21.1	0.115	1
DCLK3	9q-Del	0.115	1
EZH2	Amp_20q13.33	0.115	1
EZH2	Amp_22q13.2	0.115	1
FAM58A	NRAS	0.115	1
FGFR2	Amp_1q21.3	0.115	1
IDH1	Del_8p23.3	0.115	1
IDH1	Del_15q21.1	0.115	1
KRAS	NRAS	0.115	1
NF1	Amp_4q12	0.115	1
RIPK4	Amp_20q13.33	0.115	1
XIRP2	Del_10q23.31	0.115	1
BRAF	20q-Amp	0.116	1
FLT1	Del_8p23.3	0.116	1
KEL	Del_8p23.3	0.116	1
MPP7	10p-Del	0.116	1
MYO3B	Amp_22q13.2	0.116	1
SELP	Amp_3p13	0.116	1
TP53	Del_11q23.3	0.116	1
TRERF1	Del_8p23.3	0.116	1
USP17L2	Amp_7q34	0.116	1
CTNNA3	13q-Amp	0.117	1
EPHA4	7p-Amp	0.117	1
PARM1	Amp_3p13	0.117	1
RELN	Del_9p21.3	0.117	1
SLC9A11	Amp_7q34	0.117	1
7p-Amp	Amp_11q13.3	0.117	1
ACSBG1	Del_16q23.1	0.118	1
EPHA6	Amp_1p12	0.118	1
EPHA6	Del_15q13.3	0.118	1
HSD11B1	Del_6q26	0.118	1
MLL	Del_16q23.1	0.118	1
NUP214	7p-Amp	0.118	1
PARM1	Del_10q26.3	0.118	1
THSD7B	Amp_1q44	0.118	1
20q-Amp	16q-Del	0.118	1
20q-Amp	Del_16q23.1	0.118	1
ALPK2	Amp_7p22.1	0.119	1
CTNNA3	Del_5q31.3	0.119	1
DCLK3	Amp_11q13.3	0.119	1
FGFR2	6p-Del	0.119	1
HSD11B1	20q-Amp	0.119	1
HSD11B1	Amp_5p15.33	0.119	1
NBPF1	6p-Del	0.119	1
POTEG	Amp_11q13.3	0.119	1
BRAF	MYO3B	0.12	1
DMC1	Del_16q24.3	0.12	1
DSG3	Del_16q24.3	0.12	1
FLT1	Del_9p23	0.12	1
THSD7B	Amp_5p15.33	0.12	1
TP53	8q-Amp	0.12	1
TP63	20p-Amp	0.12	1
FLT1	Del_5q31.3	0.121	1
THSD7B	Del_16p13.3	0.121	1
ANO4	Amp_11q13.3	0.122	1
ARID2	Amp_4q12	0.122	1
C7orf58	Amp_4q12	0.122	1
C7orf58	Amp_12q15	0.122	1
CYP3A4	Del_13q34	0.122	1
EPHA7	Amp_7p22.1	0.122	1
FAM58A	10p-Del	0.122	1
FGFR2	Del_1p36.31	0.122	1
FLT1	Del_2q37.3	0.122	1
KCND2	Amp_12q14.1	0.122	1
KCND2	Del_11q23.3	0.122	1
KCND2	Del_16p13.3	0.122	1
KEL	18p-Del	0.122	1
LGR6	Del_12q23.3	0.122	1
NBPF1	10q-Del	0.122	1
NUP214	14q-Del	0.122	1
THSD7B	Del_10q23.31	0.122	1
TTN	Del_1p22.1	0.122	1
USH2A	10p-Del	0.122	1
USP17L2	6p-Amp	0.122	1
ZFX	14q-Del	0.122	1
ANO4	14q-Del	0.123	1
BRAF	CPA3	0.123	1
RPTN	Del_1p22.1	0.123	1
XIRP2	16q-Del	0.123	1
ACSBG1	Amp_7p22.1	0.124	1
EPHA6	Del_1p22.1	0.124	1
NUP214	9p-Del	0.124	1
USP17L2	Amp_1q21.3	0.124	1
ACSBG1	Del_16q12.1	0.125	1
ANO4	11q-Del	0.125	1
OR6C74	11q-Del	0.125	1
ZNF780B	Del_10q21.1	0.125	1
APC	14q-Del	0.126	1
COL3A1	Del_5q31.3	0.126	1
FLT1	Amp_22q13.2	0.126	1
KIT	Amp_7q34	0.126	1
KYNU	Amp_1q44	0.126	1
MAP2K1	11q-Del	0.126	1
MYO16	Del_10q21.1	0.126	1
TRERF1	Del_5q12.1	0.126	1
8p-Amp	Del_5q12.1	0.126	1
10q-Del	Amp_6q12	0.126	1
C15orf23	Del_16q24.3	0.127	1
CAMTA1	Amp_13q31.3	0.127	1
GUCY2F	8q-Amp	0.127	1
CBL	10q-Del	0.128	1
EPHA6	PTEN	0.128	1
KEL	14q-Del	0.128	1
RB1	10q-Del	0.128	1
APC	6p-Del	0.129	1
EPHA4	8p-Amp	0.129	1
TRERF1	6p-Del	0.129	1
USP9X	Del_1p22.1	0.129	1
BTK	Del_1p36.31	0.13	1
MAN1A1	Del_1p36.31	0.13	1
NUP214	Del_10q23.31	0.13	1
OR4S2	Amp_1q21.3	0.13	1
SLC38A4	Amp_1q44	0.13	1
THSD7B	Amp_7q34	0.13	1
USP9X	Amp_1q21.3	0.13	1
ZFX	Del_10q23.31	0.13	1
ANO4	6p-Amp	0.131	1
CTNNA3	Amp_12q14.1	0.131	1
CTNNA3	Del_16p13.3	0.131	1
DMC1	11p-Del	0.131	1
IGF1R	Del_11q23.3	0.131	1
NAP1L2	Del_15q21.1	0.131	1
PTPN22	7p-Amp	0.131	1
XIRP2	14q-Del	0.131	1
XIRP2	Del_16q24.3	0.131	1
CAMTA1	Del_10q26.3	0.132	1
CCNA1	Amp_1q21.3	0.132	1
CNTN5	Amp_5p15.33	0.132	1
CPA3	Amp_6p24.3	0.132	1
CYP3A4	Del_2q37.3	0.132	1
EMG1	Amp_7p22.1	0.132	1
EPHA7	20q-Amp	0.132	1
KIT	9q-Del	0.132	1
LGR6	Amp_6p24.3	0.132	1
LGR6	Amp_20q13.33	0.132	1
NAP1L2	Del_10q26.3	0.132	1
NUDT11	7p-Amp	0.132	1
PPP6C	20p-Amp	0.132	1
PPP6C	18p-Del	0.132	1
PPP6C	Del_2q37.3	0.132	1
SELP	Amp_5p15.33	0.132	1
SLC38A4	20q-Amp	0.132	1
Amp_22q13.2	Del_12q23.3	0.132	1
APC	Del_10p15.3	0.133	1
DCLK3	5q-Del	0.133	1
DSG3	Del_16q12.1	0.133	1
HSD11B1	Del_8p23.3	0.133	1
RIPK4	6p-Amp	0.133	1
SLC9A11	Del_15q21.1	0.133	1
TP53	Amp_1q21.3	0.133	1
TPTE	Amp_22q13.2	0.133	1
TTN	8p-Amp	0.133	1
BRAF	MYO16	0.134	1
NRAS	Del_15q21.1	0.134	1
NUP214	Del_9p23	0.134	1
TP63	Amp_20q13.33	0.134	1
CBL	Del_5q31.3	0.135	1
S100A8	9p-Del	0.135	1
USH2A	Del_9p21.3	0.135	1
USP17L2	11q-Del	0.135	1
XIRP2	Amp_7p22.1	0.135	1
PARM1	Del_13q34	0.136	1
PTEN	THSD7B	0.136	1
13q-Amp	Del_13q34	0.136	1
ALPK2	Del_6q21	0.137	1
APC	Del_1p36.31	0.137	1
EPHA4	9p-Del	0.137	1
FLT1	Del_5p15.31	0.137	1
KEL	8p-Amp	0.137	1
MYO3B	Del_5q31.3	0.137	1
OR6C74	Del_11q23.3	0.137	1
PDGFRA	Del_4q34.3	0.137	1
SLC38A4	Amp_15q26.2	0.137	1
TRERF1	Del_4q34.3	0.137	1
BTK	5q-Del	0.138	1
DMC1	Amp_1q44	0.138	1
FGFR2	Del_11q23.3	0.138	1
PTPN22	9q-Del	0.138	1
TP63	20q-Amp	0.138	1
TP63	Del_5p15.31	0.138	1
8p-Amp	9q-Del	0.138	1
KCND2	Del_14q23.3	0.139	1
KCND2	Del_16q12.1	0.139	1
S100A8	Del_10q23.31	0.139	1
USP17L2	Del_3q13.31	0.139	1
CAMTA1	6p-Del	0.14	1
CTNNA3	Amp_7q34	0.14	1
DSG3	18p-Del	0.14	1
EPHA7	8q-Amp	0.14	1
EPHA7	10q-Del	0.14	1
MYO16	10q-Del	0.14	1
MYO16	Del_16q24.3	0.14	1
NBPF1	11p-Del	0.14	1
PTEN	Amp_11q13.3	0.14	1
SLC9A11	6p-Del	0.14	1
22q-Amp	6p-Del	0.14	1
ARID2	22q-Amp	0.141	1
BRAF	C10orf54	0.141	1
C7orf58	22q-Amp	0.141	1
FRMPD4	Del_1p22.1	0.141	1
NBPF1	10p-Del	0.141	1
STK19	14q-Del	0.141	1
IDH1	Del_10q26.3	0.142	1
MAN1A1	Del_10q26.3	0.142	1
MYO16	Del_13q34	0.142	1
NUP214	Del_10q26.3	0.142	1
SLC38A4	Del_12q23.3	0.142	1
SLC9A11	Amp_6p24.3	0.142	1
USH2A	Del_10q23.31	0.142	1
ZFX	Del_10q26.3	0.142	1
20p-Amp	9p-Del	0.142	1
22q-Amp	Del_6q26	0.142	1
APC	Amp_6q12	0.143	1
CTNNA3	Del_16q23.1	0.143	1
CYP3A4	8p-Amp	0.143	1
CYP3A4	Del_5p15.31	0.143	1
EPHA6	8q-Amp	0.143	1
KRT73	Amp_8q24.21	0.143	1
LGR6	8p-Amp	0.143	1
PPP6C	Del_5p15.31	0.143	1
RAC1	Del_5p15.31	0.143	1
THSD7B	Del_15q13.3	0.143	1
TRERF1	Amp_6q12	0.143	1
USH2A	Del_16q23.1	0.143	1
DMC1	Del_6q21	0.144	1
FRMPD4	Del_9p21.3	0.144	1
USH2A	22q-Amp	0.144	1
XIRP2	11q-Del	0.144	1
XIRP2	Del_16q23.1	0.144	1
CYP3A4	Del_9p23	0.145	1
HSD11B1	7p-Amp	0.145	1
NBPF1	16q-Del	0.145	1
PPP6C	Del_9p23	0.145	1
SLC38A4	Del_15q13.3	0.145	1
STK19	7p-Amp	0.145	1
20p-Amp	16q-Del	0.145	1
DSG3	6q-Del	0.146	1
FLT1	7p-Amp	0.146	1
KYNU	Amp_17q25.3	0.146	1
MAP2K1	Amp_17q25.3	0.146	1
MAP2K1	Del_4p16.3	0.146	1
NRAS	Amp_3p13	0.146	1
SLC27A5	8q-Amp	0.146	1
TTN	Del_10q21.1	0.146	1
CDC42BPA	Del_14q23.3	0.147	1
EPHA6	Del_3q13.31	0.147	1
FGFR2	13q-Amp	0.147	1
FLT1	10q-Del	0.147	1
GLI1	Del_14q23.3	0.147	1
GUCY2F	20p-Amp	0.147	1
GUCY2F	18p-Del	0.147	1
KEL	10q-Del	0.147	1
MAN1A1	16q-Del	0.147	1
MLL	Del_4p16.3	0.147	1
MPP7	Amp_5p15.33	0.147	1
NF1	Del_3q13.31	0.147	1
PDGFRA	6q-Del	0.147	1
C10orf54	Del_10q26.3	0.148	1
DCLK3	1q-Amp	0.148	1
S100A8	Del_10q26.3	0.148	1
MLL	Del_11q23.3	0.149	1
SLC9A11	14q-Del	0.149	1
STK19	Del_1p36.31	0.149	1
9q-Del	Amp_3p13	0.149	1
ALPK2	Del_2q37.3	0.15	1
RELN	Del_5q12.1	0.15	1
THSD7B	Amp_1q21.3	0.15	1
DCLK3	Amp_7p22.1	0.151	1
NBPF1	Del_10q23.31	0.151	1
BRAF	8p-Amp	0.152	1
CNTN5	Del_15q13.3	0.152	1
EPHA4	Del_3q13.31	0.152	1
MAN1A1	11q-Del	0.152	1
MPP7	Del_10q21.1	0.152	1
MYO16	Del_10q23.31	0.152	1
XIRP2	Del_10q26.3	0.152	1
Amp_11q13.3	Del_3q13.31	0.152	1
C15orf23	Amp_22q13.2	0.153	1
CAMTA1	Del_1p36.31	0.153	1
CDK4	1q-Amp	0.153	1
FLT1	PTEN	0.153	1
GUCY2F	Amp_20q13.33	0.153	1
HSD11B1	Del_6q21	0.153	1
KEL	22q-Amp	0.153	1
USH2A	Amp_11q13.3	0.153	1
Amp_11q13.3	Del_10q21.1	0.153	1
ACSBG1	Del_15q21.1	0.154	1
ATP5F1	Amp_7q34	0.154	1
C15orf23	Del_6q26	0.154	1
CAMTA1	Amp_6q12	0.154	1
CDKN2A	KIT	0.154	1
CPA3	PTEN	0.154	1
KRAS	Amp_7q34	0.154	1
MAP2K1	Amp_7q34	0.154	1
SLC9A11	Amp_1q44	0.154	1
THSD7B	Del_13q34	0.154	1
Amp_1q44	Del_4p16.3	0.154	1
ANO4	5q-Del	0.155	1
C10orf28	Del_6q26	0.155	1
DMC1	9p-Del	0.155	1
NAP1L2	Amp_7q34	0.155	1
Amp_3p13	Del_16q12.1	0.155	1
EPHA7	ZFX	0.156	1
KYNU	Del_11q23.3	0.156	1
SELP	Amp_12q15	0.156	1
SLC38A4	Amp_4q12	0.156	1
THSD7B	Del_14q23.3	0.156	1
ACSBG1	Del_9p21.3	0.157	1
APC	Amp_8q24.21	0.157	1
FLT1	Amp_7p22.1	0.157	1
KEL	Amp_7p22.1	0.157	1
NAP1L2	8q-Amp	0.157	1
PDGFRA	Amp_8q24.21	0.157	1
RELN	Amp_6q12	0.157	1
THSD7B	5q-Del	0.157	1
TP63	22q-Amp	0.157	1
USH2A	Del_6q26	0.157	1
USP17L2	Amp_7p22.1	0.157	1
USP9X	Del_9p21.3	0.157	1
C7orf58	Del_3q13.31	0.158	1
CDK4	COL3A1	0.158	1
DMC1	6p-Amp	0.158	1
EPHA6	RQCD1	0.158	1
GNAQ	9q-Del	0.158	1
GUCY2F	8p-Amp	0.158	1
MPP7	8q-Amp	0.158	1
MYO16	18p-Del	0.158	1
MYO16	Del_8p23.3	0.158	1
SELP	20p-Amp	0.158	1
SELP	Del_15q21.1	0.158	1
SLC38A4	20p-Amp	0.158	1
SLC38A4	Del_15q21.1	0.158	1
ZFX	Del_9p21.3	0.158	1
COL3A1	6p-Amp	0.159	1
DSG3	Del_5p15.31	0.159	1
MLL	Amp_5p15.33	0.159	1
NUP214	Amp_1q44	0.159	1
PDGFRA	Del_6q21	0.159	1
16q-Del	Amp_20q13.33	0.159	1
CYP3A4	6p-Amp	0.16	1
EPHA4	Del_14q23.3	0.16	1
LGR6	6p-Amp	0.16	1
PPP6C	6p-Amp	0.16	1
RPTN	6p-Del	0.16	1
RPTN	Amp_11q13.3	0.16	1
SLC38A4	Del_11q23.3	0.16	1
SLC9A11	Amp_6q12	0.16	1
ZFX	7q-Amp	0.16	1
6q-Del	Amp_3p13	0.16	1
ALPK2	9p-Del	0.161	1
ALPK2	Del_9p23	0.161	1
EPHA6	Amp_3p13	0.161	1
MPP7	Amp_1p12	0.161	1
MPP7	Del_15q13.3	0.161	1
RELN	Amp_22q13.2	0.161	1
RPTN	Del_8p23.3	0.161	1
XIRP2	Amp_7q34	0.161	1
Amp_11q13.3	Del_10q26.3	0.161	1
Amp_20q13.33	Del_9p23	0.161	1
ANO4	20p-Amp	0.162	1
ANO4	Del_14q23.3	0.162	1
CTNNA3	7p-Amp	0.162	1
EZH2	20q-Amp	0.162	1
RIPK4	20q-Amp	0.162	1
ANO4	13q-Amp	0.163	1
COL3A1	9q-Del	0.163	1
FGFR2	Amp_12q14.1	0.163	1
FGFR2	Del_16p13.3	0.163	1
POTEG	Del_16p13.3	0.163	1
1q-Amp	Del_1p22.1	0.163	1
KCND2	Amp_5p15.33	0.164	1
USP9X	Del_9p23	0.164	1
11p-Del	Amp_22q13.2	0.164	1
BTK	Del_1p22.1	0.165	1
DMC1	Del_16q23.1	0.165	1
FLT1	6p-Amp	0.165	1
IDH1	Del_1p22.1	0.165	1
KEL	6p-Amp	0.165	1
KRTAP5-10	Amp_22q13.2	0.165	1
MAN1A1	Del_1p22.1	0.165	1
MAN1A1	Del_4p16.3	0.165	1
NAP1L2	5q-Del	0.165	1
NUP214	Del_1p22.1	0.165	1
SLC9A11	Del_4q34.3	0.165	1
TTN	20p-Amp	0.165	1
TTN	Del_2q37.3	0.165	1
USP17L2	Amp_13q31.3	0.165	1
XIRP2	Amp_1p12	0.165	1
ZFX	Amp_17q25.3	0.165	1
CTNNA3	CTNNB1	0.166	1
CTNNA3	Amp_15q26.2	0.166	1
KYNU	Amp_3p13	0.166	1
LGR6	Del_19p13.3	0.167	1
NRAS	SLC38A4	0.167	1
PPP6C	Del_3q13.31	0.167	1
RAC1	Del_3q13.31	0.167	1
RELN	Del_5q31.3	0.167	1
6p-Amp	Del_12q23.3	0.167	1
ATP5F1	Amp_8q24.21	0.168	1
CBL	Del_10q21.1	0.168	1
DMC1	9q-Del	0.168	1
DMC1	Amp_1q21.3	0.168	1
EPHA4	Amp_8q24.21	0.168	1
HSD11B1	10p-Del	0.168	1
NUP214	Del_5q31.3	0.168	1
RB1	Del_10q21.1	0.168	1
TTN	Del_6q21	0.168	1
FGFR2	7q-Amp	0.169	1
KCND2	Del_13q34	0.169	1
MAP2K1	6q-Del	0.169	1
TPTE	1q-Amp	0.169	1
7q-Amp	Amp_11q13.3	0.169	1
ALPK2	BRAF	0.17	1
ALPK2	Del_5p15.31	0.17	1
C15orf23	22q-Amp	0.17	1
CAMTA1	13q-Amp	0.17	1
FGFR2	Amp_6p24.3	0.17	1
GUCY2F	22q-Amp	0.17	1
NRAS	Del_10q23.31	0.17	1
OXA1L	Del_5q31.3	0.17	1
PARM1	22q-Amp	0.17	1
PTPN22	10p-Del	0.17	1
S100A8	Del_5q31.3	0.17	1
CDKN2A	EPHA4	0.171	1
CDKN2A	Amp_11q13.3	0.171	1
DCLK3	Amp_17q25.3	0.171	1
DCLK3	Del_1p22.1	0.171	1
EMG1	TPTE	0.171	1
EMG1	7p-Amp	0.171	1
LGR6	Del_16q23.1	0.171	1
MPP7	18p-Del	0.171	1
MPP7	Del_2q37.3	0.171	1
NBPF1	Del_1p22.1	0.171	1
XIRP2	Del_14q23.3	0.171	1
XIRP2	Del_16q12.1	0.171	1
20p-Amp	Del_4p16.3	0.171	1
18p-Del	Amp_17q25.3	0.171	1
BRAF	Del_9p23	0.172	1
CYP3A5	Del_1p36.31	0.172	1
DDX3X	Amp_7q34	0.172	1
FGFR2	Del_6q26	0.172	1
IGF1R	Del_1p36.31	0.172	1
THSD7B	6q-Del	0.172	1
TP53	1q-Amp	0.172	1
USP17L2	10p-Del	0.172	1
CDC42BPA	Del_11q23.3	0.173	1
DMC1	Del_14q23.3	0.173	1
DMC1	Del_16q12.1	0.173	1
HSD11B1	Del_10q23.31	0.173	1
KRT73	Del_11q23.3	0.173	1
NF1	8q-Amp	0.173	1
OR4S2	8q-Amp	0.173	1
SELP	14q-Del	0.173	1
TP63	Del_8p23.3	0.173	1
USP17L2	Amp_1p12	0.173	1
EPHA7	Del_10q26.3	0.174	1
KEL	Del_10q26.3	0.174	1
MYO16	Del_10q26.3	0.174	1
SELP	Del_5p15.31	0.174	1
SLC38A4	8p-Amp	0.174	1
STK19	1q-Amp	0.174	1
XIRP2	Del_6q26	0.174	1
APC	Amp_12q14.1	0.175	1
KCND2	Amp_4q12	0.175	1
MLL	Del_6q21	0.175	1
NF1	Del_1p22.1	0.175	1
PTPN22	Amp_12q14.1	0.175	1
PTPN22	Del_16p13.3	0.175	1
TRERF1	Amp_12q14.1	0.175	1
ATP5F1	Del_9p23	0.176	1
CDKN2A	Del_15q21.1	0.176	1
CYP3A4	1q-Amp	0.176	1
CYP3A4	9p-Del	0.176	1
FAM58A	Del_9p23	0.176	1
FRMPD4	9p-Del	0.176	1
GNAQ	Del_9p23	0.176	1
LGR6	9p-Del	0.176	1
ACSBG1	7p-Amp	0.177	1
CBL	Del_16q24.3	0.177	1
FRMPD4	MAP2K1	0.177	1
IGF1R	7p-Amp	0.177	1
KYNU	Amp_8q24.21	0.177	1
MAP2K1	Amp_8q24.21	0.177	1
TRERF1	9p-Del	0.177	1
TTN	6q-Del	0.177	1
Amp_20q13.33	Del_16p13.3	0.177	1
ARID2	Del_14q23.3	0.178	1
S100A8	10q-Del	0.178	1
SLC38A4	Amp_20q13.33	0.178	1
COL3A1	Del_16q23.1	0.179	1
KRT73	Del_8p23.3	0.179	1
KRTAP5-10	Amp_1q44	0.179	1
NRAS	Amp_7p22.1	0.179	1
SLC38A4	Del_5q31.3	0.179	1
USP17L2	6p-Del	0.179	1
ZNF780B	Amp_1q44	0.179	1
CBL	Del_10p15.3	0.18	1
RB1	Del_10p15.3	0.18	1
TP63	Del_3q13.31	0.18	1
22q-Amp	11p-Del	0.18	1
ACSBG1	5q-Del	0.181	1
ALPK2	Amp_5p15.33	0.181	1
BRAF	16q-Del	0.181	1
CDKN2A	GML	0.181	1
DMC1	Amp_8q24.21	0.181	1
GML	Amp_8q24.21	0.181	1
MLL	Amp_20q13.33	0.181	1
OR4S2	Del_2q37.3	0.181	1
RAC1	9q-Del	0.181	1
20p-Amp	Del_5q31.3	0.181	1
9q-Del	Amp_6q12	0.181	1
ALPK2	Amp_8q24.21	0.182	1
APC	11q-Del	0.182	1
COL3A1	Del_5p15.31	0.182	1
DDX3X	Del_14q23.3	0.182	1
EPHA4	20q-Amp	0.182	1
NRAS	PTEN	0.182	1
NRAS	22q-Amp	0.182	1
PTPN22	11q-Del	0.182	1
USH2A	Del_10q26.3	0.182	1
XIRP2	11p-Del	0.182	1
8q-Amp	Del_5q31.3	0.182	1
Amp_6q12	Del_14q23.3	0.182	1
GUCY2F	6p-Amp	0.183	1
PARM1	Del_3q13.31	0.183	1
C10orf28	Del_6q21	0.184	1
NUDT11	XIRP2	0.184	1
NUP214	10q-Del	0.184	1
ZFX	10q-Del	0.184	1
DSG3	Del_4p16.3	0.185	1
EPHA7	9q-Del	0.185	1
MYO16	9q-Del	0.185	1
NAP1L2	Amp_8q24.21	0.185	1
RPTN	1q-Amp	0.185	1
STK19	Del_9p23	0.185	1
USP17L2	Del_8p23.3	0.185	1
ANO4	Amp_6p24.3	0.186	1
IDH1	Amp_3p13	0.186	1
LGR6	11q-Del	0.186	1
MAN1A1	Amp_3p13	0.186	1
THSD7B	20p-Amp	0.186	1
ZFX	Amp_3p13	0.186	1
ANO4	Amp_12q14.1	0.187	1
EPHA4	Amp_7p22.1	0.187	1
HSD11B1	Amp_17q25.3	0.187	1
HSD11B1	Del_1p22.1	0.187	1
NAP1L2	Amp_12q14.1	0.187	1
NAP1L2	Del_16p13.3	0.187	1
NRAS	Del_1p36.31	0.187	1
SLC9A11	20p-Amp	0.187	1
22q-Amp	Amp_12q14.1	0.187	1
Amp_7p22.1	Amp_11q13.3	0.187	1
CDC42BPA	14q-Del	0.188	1
EPHA7	Del_4q34.3	0.188	1
GLI1	14q-Del	0.188	1
MSTN	6p-Amp	0.188	1
APC	Del_1p22.1	0.189	1
C10orf54	Del_11q23.3	0.189	1
MPP7	Del_5p15.31	0.189	1
PDGFRA	Del_1p22.1	0.189	1
TRERF1	Del_4p16.3	0.189	1
TTN	Amp_12q14.1	0.189	1
Amp_6q12	Del_10q21.1	0.189	1
ARID2	Amp_17q25.3	0.19	1
BTK	Amp_7q34	0.19	1
IDH1	Amp_7q34	0.19	1
NUP214	Amp_7q34	0.19	1
ACSBG1	16q-Del	0.191	1
HSD11B1	7q-Amp	0.191	1
STK19	7q-Amp	0.191	1
14q-Del	Amp_1q21.3	0.191	1
BRAF	Del_15q21.1	0.192	1
MYO16	22q-Amp	0.192	1
NF1	Amp_8q24.21	0.192	1
SLC38A4	22q-Amp	0.192	1
XIRP2	Amp_4q12	0.192	1
ARID2	8q-Amp	0.193	1
CNTN5	Del_14q23.3	0.193	1
COL3A1	Del_10q26.3	0.193	1
NF1	20q-Amp	0.193	1
NF1	Amp_5p15.33	0.193	1
SLC9A11	7p-Amp	0.193	1
USP17L2	Del_11q23.3	0.193	1
USP9X	Del_5p15.31	0.193	1
8q-Amp	Del_5q12.1	0.193	1
EPHA4	Amp_11q13.3	0.194	1
LGR6	Amp_13q31.3	0.195	1
NRAS	Del_16q23.1	0.195	1
RAC1	Amp_13q31.3	0.195	1
RPTN	6p-Amp	0.195	1
THSD7B	6p-Amp	0.195	1
TP63	6q-Del	0.195	1
6p-Amp	Del_14q23.3	0.195	1
KEL	Del_14q23.3	0.196	1
NRAS	SYK	0.196	1
7q-Amp	Amp_6q12	0.196	1
CDC42BPA	Del_1p36.31	0.197	1
CDKN2A	9q-Del	0.197	1
EPHA6	Amp_22q13.2	0.197	1
FRMPD4	IDH1	0.197	1
GLI1	Del_1p36.31	0.197	1
NBPF1	Del_10q21.1	0.197	1
RIPK4	Del_1p36.31	0.197	1
USP9X	Del_10q26.3	0.197	1
BTK	Amp_1q21.3	0.198	1
CAMTA1	Del_6q21	0.198	1
DMC1	Amp_1p12	0.198	1
DMC1	Del_15q13.3	0.198	1
IDH1	Amp_1q21.3	0.198	1
MAN1A1	9q-Del	0.198	1
NUP214	9q-Del	0.198	1
NUP214	Amp_1q21.3	0.198	1
TPTE	Amp_12q14.1	0.198	1
ZFX	9q-Del	0.198	1
1q-Amp	Del_1p36.31	0.198	1
Amp_13q31.3	Del_5q12.1	0.198	1
ALPK2	Del_1p22.1	0.199	1
Amp_22q13.2	Del_1p22.1	0.199	1
BTK	Del_11q23.3	0.2	1
COL3A1	EMG1	0.2	1
DCLK3	Amp_15q26.2	0.2	1
FGFR2	Amp_15q26.2	0.2	1
KYNU	18p-Del	0.2	1
MAN1A1	Del_11q23.3	0.2	1
MAP2K1	NBPF1	0.2	1
MAP2K1	20p-Amp	0.2	1
MAP2K1	18p-Del	0.2	1
MAP2K1	Del_2q37.3	0.2	1
NUP214	Del_11q23.3	0.2	1
THSD7B	14q-Del	0.2	1
TP63	Amp_3p13	0.2	1
9p-Del	Amp_5p15.33	0.2	1
CTNNA3	20p-Amp	0.201	1
CTNNA3	18p-Del	0.201	1
POTEG	Amp_3p13	0.201	1
USP17L2	Amp_6p24.3	0.201	1
USP17L2	Del_6q21	0.201	1
18p-Del	Amp_3p13	0.201	1
BRAF	CNTN5	0.202	1
BRAF	Del_16q12.1	0.202	1
EPHA6	Del_6q26	0.202	1
FRMPD4	Amp_5p15.33	0.202	1
MAP2K1	8q-Amp	0.202	1
CAMTA1	10p-Del	0.203	1
CNTN5	Del_1p22.1	0.203	1
LGR6	Del_10q26.3	0.203	1
MAP2K1	USH2A	0.203	1
MPP7	Del_5q31.3	0.203	1
OR4S2	Amp_22q13.2	0.203	1
PPP6C	Del_10q26.3	0.203	1
USH2A	Del_10q21.1	0.203	1
Amp_6q12	Del_10q26.3	0.203	1
Amp_17q25.3	Del_5q31.3	0.203	1
CBL	10p-Del	0.204	1
KCND2	8p-Amp	0.204	1
KRTAP5-10	Del_14q23.3	0.204	1
MLL	10p-Del	0.204	1
MSTN	Del_14q23.3	0.204	1
RB1	10p-Del	0.204	1
TP53	Del_19p13.3	0.204	1
CNTN5	Amp_8q24.21	0.205	1
CPA3	Amp_5p15.33	0.205	1
CYP3A4	20q-Amp	0.205	1
CYP3A4	Amp_5p15.33	0.205	1
DSG3	Del_8p23.3	0.205	1
GNAQ	TTN	0.205	1
LGR6	20q-Amp	0.205	1
LGR6	Amp_5p15.33	0.205	1
RAC1	17p-Del	0.205	1
TP53	Del_8p23.3	0.205	1
TP53	Del_15q21.1	0.205	1
Amp_15q26.2	Del_6q21	0.205	1
GUCY2F	1q-Amp	0.206	1
GUCY2F	Del_14q23.3	0.206	1
KCND2	11p-Del	0.206	1
CAMTA1	Del_1p22.1	0.207	1
DMC1	Del_8p23.3	0.207	1
DMC1	Del_15q21.1	0.207	1
GML	Del_8p23.3	0.207	1
KEL	Amp_17q25.3	0.207	1
LGR6	Del_5q31.3	0.207	1
MPP7	22q-Amp	0.207	1
NF1	6p-Del	0.207	1
PDGFRA	Del_5q31.3	0.207	1
PTEN	Amp_17q25.3	0.207	1
THSD7B	Del_5q31.3	0.207	1
XIRP2	Del_13q34	0.207	1
8p-Amp	Del_5q31.3	0.207	1
Amp_6q12	Del_5q31.3	0.207	1
Amp_17q25.3	Del_4q34.3	0.207	1
CDKN2A	1q-Amp	0.208	1
CYP3A4	Del_10p15.3	0.208	1
EPHA6	Del_6q21	0.208	1
XIRP2	Del_9p21.3	0.208	1
10p-Del	Amp_11q13.3	0.208	1
ACSBG1	1q-Amp	0.209	1
APCS	1q-Amp	0.209	1
BTK	Del_12q23.3	0.209	1
DMC1	Del_9p23	0.209	1
HSD11B1	Amp_3p13	0.209	1
KCND2	14q-Del	0.209	1
MAN1A1	Del_12q23.3	0.209	1
PTEN	11q-Del	0.209	1
SLC9A11	8p-Amp	0.209	1
TRERF1	6p-Amp	0.209	1
ZFX	Del_12q23.3	0.209	1
ZFX	Del_13q34	0.209	1
22q-Amp	11q-Del	0.209	1
BRAF	Del_2q37.3	0.21	1
ACSBG1	Amp_17q25.3	0.211	1
APCS	Del_1p22.1	0.211	1
CYP3A4	6p-Del	0.211	1
CYP3A4	Amp_11q13.3	0.211	1
FLT1	Amp_13q31.3	0.211	1
IGF1R	Del_1p22.1	0.211	1
LGR6	6p-Del	0.211	1
MAN1A1	Del_6q26	0.211	1
MLL	Del_5q12.1	0.211	1
PPP6C	Amp_11q13.3	0.211	1
RAC1	6p-Del	0.211	1
TTN	5q-Del	0.211	1
XIRP2	Amp_12q14.1	0.211	1
XIRP2	Del_16p13.3	0.211	1
Amp_13q31.3	Del_4q34.3	0.211	1
ACSBG1	10p-Del	0.212	1
APCS	10p-Del	0.212	1
C15orf23	Amp_13q31.3	0.212	1
CDKN2A	KRTAP5-10	0.212	1
CTNNA3	1q-Amp	0.212	1
GUCY2F	Amp_13q31.3	0.212	1
MYO16	Del_19p13.3	0.212	1
PARM1	Amp_13q31.3	0.212	1
USP17L2	13q-Amp	0.212	1
XIRP2	Amp_20q13.33	0.212	1
1q-Amp	Amp_3p13	0.212	1
Amp_1q44	Amp_3p13	0.212	1
CTNNB1	PDGFRA	0.213	1
CTNNB1	Del_5p15.31	0.213	1
KRTAP5-10	Amp_1q21.3	0.213	1
MAP2K1	PDGFRA	0.213	1
NF1	Amp_3p13	0.213	1
TRERF1	Amp_1q44	0.213	1
Amp_3p13	Del_8p23.3	0.213	1
ANO4	Del_1p22.1	0.214	1
MLL	Del_10q23.31	0.214	1
TPTE	Del_13q34	0.214	1
Amp_1q21.3	Del_1p22.1	0.214	1
FGFR2	Del_16q12.1	0.215	1
IDH1	Amp_8q24.21	0.215	1
NBPF1	Del_16q12.1	0.215	1
TP63	Del_6q26	0.215	1
Amp_8q24.21	Amp_12q15	0.215	1
C10orf54	8q-Amp	0.216	1
C10orf54	Del_16q24.3	0.216	1
C15orf23	11q-Del	0.216	1
EPHA6	Amp_5p15.33	0.216	1
NUDT11	TP63	0.216	1
OXA1L	Del_16q24.3	0.216	1
S100A8	8q-Amp	0.216	1
USH2A	Amp_3p13	0.216	1
USH2A	Amp_8q24.21	0.216	1
BRAF	FRMPD4	0.217	1
C7orf58	GML	0.217	1
DDX3X	Del_9p21.3	0.217	1
DMC1	14q-Del	0.217	1
DMC1	Del_5q12.1	0.217	1
FRMPD4	Amp_1p12	0.217	1
GML	14q-Del	0.217	1
MYO3B	Del_15q13.3	0.217	1
PPP6C	Del_9p21.3	0.217	1
ACSBG1	11q-Del	0.218	1
FRMPD4	18p-Del	0.218	1
MYO3B	20p-Amp	0.218	1
PPP6C	Amp_1p12	0.218	1
TPTE	Del_8p23.3	0.218	1
TRERF1	Del_9p23	0.218	1
ZNF780B	Del_10q23.31	0.218	1
CDK4	THSD7B	0.219	1
ARID2	Amp_8q24.21	0.22	1
CTNNA3	8p-Amp	0.22	1
DCLK3	Del_10p15.3	0.22	1
FLT1	Amp_1q21.3	0.22	1
KEL	9q-Del	0.22	1
NBPF1	Del_10p15.3	0.22	1
TP53	6p-Amp	0.22	1
TRERF1	Amp_3p13	0.22	1
USH2A	Del_Xp21.1	0.22	1
USP9X	Del_19p13.3	0.22	1
ARID2	6p-Del	0.221	1
ARID2	Amp_11q13.3	0.221	1
ARID2	Del_9p21.3	0.221	1
ATP5F1	7p-Amp	0.221	1
EPHA4	14q-Del	0.221	1
EPHA4	Del_9p23	0.221	1
KRAS	7p-Amp	0.221	1
LGR6	Amp_7p22.1	0.221	1
MLL	10q-Del	0.221	1
MSTN	Amp_5p15.33	0.221	1
USP17L2	9p-Del	0.221	1
14q-Del	Amp_11q13.3	0.221	1
Amp_6q12	Amp_7p22.1	0.221	1
ALPK2	Del_8p23.3	0.222	1
DCLK3	IDH1	0.222	1
DCLK3	Amp_4q12	0.222	1
FGFR2	IDH1	0.222	1
FGFR2	Amp_12q15	0.222	1
IDH1	18p-Del	0.222	1
IDH1	Del_2q37.3	0.222	1
MAN1A1	20p-Amp	0.222	1
MAN1A1	Del_2q37.3	0.222	1
MAP2K1	9p-Del	0.222	1
NF1	Amp_20q13.33	0.222	1
NUP214	20p-Amp	0.222	1
NUP214	18p-Del	0.222	1
NUP214	Del_2q37.3	0.222	1
OR6C74	6p-Amp	0.222	1
POTEG	Amp_12q15	0.222	1
RB1	SLC9A11	0.222	1
RELN	9p-Del	0.222	1
RELN	Del_9p23	0.222	1
ZFX	20p-Amp	0.222	1
ZFX	18p-Del	0.222	1
DSG3	MAP2K1	0.223	1
KCND2	22q-Amp	0.223	1
MAP2K1	11p-Del	0.223	1
MLL	Del_12q23.3	0.223	1
MLL	Del_13q34	0.223	1
MYO16	16q-Del	0.223	1
THSD7B	8p-Amp	0.223	1
BRAF	EMG1	0.224	1
C7orf58	Amp_6p24.3	0.224	1
DSG3	Del_5q31.3	0.224	1
MLL	Amp_1q21.3	0.224	1
PTPN22	Del_16q23.1	0.224	1
9q-Del	Amp_5p15.33	0.224	1
Amp_6p24.3	Del_5q12.1	0.224	1
MYO3B	Amp_7p22.1	0.225	1
NRAS	Del_16q12.1	0.225	1
NUDT11	USH2A	0.225	1
S100A8	Del_10q21.1	0.225	1
ARID2	11p-Del	0.226	1
CTNNA3	11q-Del	0.226	1
DMC1	Del_4q34.3	0.226	1
TP53	14q-Del	0.226	1
1q-Amp	Del_19p13.3	0.226	1
5q-Del	Amp_13q31.3	0.226	1
DCLK3	Amp_7q34	0.227	1
GUCY2F	6q-Del	0.227	1
KYNU	PTEN	0.227	1
MAP2K1	Del_9p21.3	0.227	1
NF1	Del_9p23	0.227	1
SYK	Del_10q23.31	0.227	1
CPA3	Amp_6q12	0.228	1
CYP3A4	DDX3X	0.228	1
CYP3A4	Amp_6q12	0.228	1
LGR6	NRAS	0.228	1
MLL	Del_10q21.1	0.228	1
MPP7	Del_3q13.31	0.228	1
PARM1	7q-Amp	0.228	1
PARM1	6p-Del	0.228	1
PARM1	Amp_11q13.3	0.228	1
PPP6C	Amp_6q12	0.228	1
RAC1	Amp_6q12	0.228	1
THSD7B	9q-Del	0.228	1
THSD7B	Del_10p15.3	0.228	1
Del_3q13.31	Del_4p16.3	0.228	1
ARID2	Amp_3p13	0.229	1
TPTE	Amp_1q44	0.229	1
BRAF	EPHA7	0.23	1
CAMTA1	Del_10q23.31	0.23	1
CDKN2A	Del_2q37.3	0.23	1
ZNF780B	Amp_1p12	0.23	1
ANO4	Del_3q13.31	0.231	1
CBL	Del_16q23.1	0.231	1
CCK	Del_6q26	0.231	1
CCNA1	Del_10p15.3	0.231	1
CDC42BPA	Del_10p15.3	0.231	1
CPA3	Del_8p23.3	0.231	1
DDX3X	Del_8p23.3	0.231	1
DSG3	NUDT11	0.231	1
EZH2	Del_10p15.3	0.231	1
FLT1	17p-Del	0.231	1
GUCY2F	20q-Amp	0.231	1
NGF	Del_16q23.1	0.231	1
OR6C74	Amp_1q44	0.231	1
PARM1	20q-Amp	0.231	1
PTPN11	11p-Del	0.231	1
RAC1	Del_8p23.3	0.231	1
TTN	Del_15q13.3	0.231	1
USP17L2	Amp_12q14.1	0.231	1
C15orf23	Del_10q21.1	0.232	1
C15orf23	Del_10q23.31	0.232	1
GUCY2F	Del_10q23.31	0.232	1
MLL	1q-Amp	0.232	1
PARM1	Del_10q23.31	0.232	1
STK19	Del_9p21.3	0.232	1
USP17L2	Del_16q24.3	0.232	1
CCK	RELN	0.233	1
EPHA6	20p-Amp	0.233	1
EPHA7	Del_10q21.1	0.233	1
HSD11B1	Del_12q23.3	0.233	1
OR4S2	7p-Amp	0.233	1
USP9X	7p-Amp	0.233	1
ACSBG1	Amp_3p13	0.234	1
APCS	Amp_3p13	0.234	1
CNTN5	GML	0.234	1
IDH1	8q-Amp	0.234	1
IDH1	Amp_7p22.1	0.234	1
MYO3B	Del_8p23.3	0.234	1
PTEN	SLC9A11	0.234	1
SLC9A11	20q-Amp	0.234	1
SYK	Amp_3p13	0.234	1
THSD7B	Del_4q34.3	0.234	1
ZFX	8q-Amp	0.234	1
CDKN2A	Amp_1q44	0.235	1
FLT1	Amp_11q13.3	0.235	1
HSD11B1	10q-Del	0.235	1
MYO16	Del_9p23	0.235	1
MYO16	Del_9p21.3	0.235	1
POTEG	10q-Del	0.235	1
Amp_11q13.3	Del_4q34.3	0.235	1
BTK	Del_5p15.31	0.236	1
MAN1A1	Del_5p15.31	0.236	1
NUP214	8p-Amp	0.236	1
NUP214	Del_5p15.31	0.236	1
POTEG	Del_13q34	0.236	1
TRERF1	Amp_12q15	0.236	1
XIRP2	20q-Amp	0.236	1
ZFX	8p-Amp	0.236	1
20p-Amp	Del_12q23.3	0.236	1
Amp_4q12	Del_5p15.31	0.236	1
ACSBG1	Amp_6p24.3	0.237	1
CDC42BPA	Del_9p21.3	0.237	1
CNTN5	8p-Amp	0.237	1
CNTN5	Del_5p15.31	0.237	1
DMC1	5q-Del	0.237	1
FGFR2	Del_6q21	0.237	1
MYO3B	8p-Amp	0.237	1
ALPK2	CDK4	0.238	1
C15orf23	Amp_8q24.21	0.238	1
NAP1L2	Amp_6p24.3	0.238	1
NF1	NRAS	0.238	1
OR4S2	6p-Amp	0.238	1
PTPN11	Amp_20q13.33	0.238	1
PTPN11	Amp_22q13.2	0.238	1
S100A8	Del_9p23	0.238	1
S100A8	Del_10p15.3	0.238	1
TTN	Amp_8q24.21	0.238	1
APC	Del_14q23.3	0.239	1
ATP5F1	Del_9p21.3	0.239	1
CCNA1	Amp_17q25.3	0.239	1
CDC42BPA	Del_1p22.1	0.239	1
COL3A1	5q-Del	0.239	1
COL3A1	Del_3q13.31	0.239	1
COL3A1	Del_19p13.3	0.239	1
GNAQ	Del_9p21.3	0.239	1
NBPF1	9q-Del	0.239	1
PTPN22	Del_16q12.1	0.239	1
RIPK4	Del_1p22.1	0.239	1
RPTN	Del_5p15.31	0.239	1
RQCD1	Del_14q23.3	0.239	1
SLC38A4	Amp_7p22.1	0.239	1
ALPK2	6p-Amp	0.24	1
ANO4	Del_15q21.1	0.24	1
CAMTA1	Amp_3p13	0.24	1
MSTN	Del_15q21.1	0.24	1
TTN	10q-Del	0.24	1
ZNF780B	Del_9p21.3	0.24	1
6p-Del	Amp_6p24.3	0.24	1
KYNU	Del_3q13.31	0.241	1
MAP2K1	Del_3q13.31	0.241	1
MAP2K1	Del_19p13.3	0.241	1
NUDT11	Del_9p21.3	0.241	1
S100A8	Del_9p21.3	0.241	1
STK19	Amp_1q21.3	0.241	1
USP17L2	7p-Amp	0.241	1
7q-Amp	Amp_3p13	0.241	1
DSG3	Del_16q23.1	0.242	1
THSD7B	Amp_4q12	0.242	1
THSD7B	Amp_12q15	0.242	1
ARID2	Del_10p15.3	0.243	1
EPHA6	Amp_8q24.21	0.243	1
FLT1	9p-Del	0.243	1
SLC27A5	Amp_7p22.1	0.243	1
SYK	Del_10q26.3	0.243	1
ZNF780B	Amp_7p22.1	0.243	1
C7orf58	Amp_20q13.33	0.244	1
GUCY2F	Amp_1p12	0.244	1
NRAS	18p-Del	0.244	1
PARM1	Del_15q13.3	0.244	1
ACSBG1	Amp_1q44	0.245	1
ANO4	Amp_15q26.2	0.245	1
C7orf58	Del_11q23.3	0.245	1
DCLK3	7p-Amp	0.245	1
FGFR2	7p-Amp	0.245	1
SYK	Amp_1q44	0.245	1
ALPK2	Amp_3p13	0.246	1
ARID2	Amp_6q12	0.246	1
C7orf58	RAC1	0.246	1
CDKN2A	Del_16p13.3	0.246	1
DDX3X	14q-Del	0.246	1
GUCY2F	RAC1	0.246	1
HSD11B1	20p-Amp	0.246	1
KEL	Del_5q31.3	0.246	1
LGR6	13q-Amp	0.246	1
LGR6	Del_5q12.1	0.246	1
RAC1	13q-Amp	0.246	1
STK19	20p-Amp	0.246	1
STK19	18p-Del	0.246	1
THSD7B	11q-Del	0.246	1
TPTE	Del_1p22.1	0.246	1
14q-Del	Amp_6q12	0.246	1
Amp_6q12	Del_5q12.1	0.246	1
ANO4	CDK4	0.247	1
CDC42BPA	NRAS	0.247	1
DMC1	16q-Del	0.247	1
EZH2	NRAS	0.247	1
FGFR2	Amp_5p15.33	0.247	1
KIT	NRAS	0.247	1
MLL	18p-Del	0.247	1
MYO3B	Amp_1q44	0.247	1
THSD7B	Amp_1p12	0.247	1
XIRP2	20p-Amp	0.247	1
CBL	CDKN2A	0.248	1
CDKN2A	RB1	0.248	1
EPHA4	Del_16p13.3	0.248	1
USH2A	10q-Del	0.248	1
XIRP2	Del_6q21	0.248	1
EPHA7	9p-Del	0.249	1
KEL	11p-Del	0.249	1
MYO16	9p-Del	0.249	1
NAP1L2	Del_16q23.1	0.249	1
22q-Amp	Del_16q23.1	0.249	1
BRAF	CBL	0.25	1
BTK	22q-Amp	0.25	1
CAMTA1	IDH1	0.25	1
CCNA1	1q-Amp	0.25	1
GLI1	1q-Amp	0.25	1
HSD11B1	6q-Del	0.25	1
IDH1	NAP1L2	0.25	1
IDH1	22q-Amp	0.25	1
KRTAP5-10	14q-Del	0.25	1
MAN1A1	22q-Amp	0.25	1
MSTN	14q-Del	0.25	1
NAP1L2	Amp_12q15	0.25	1
PTEN	Amp_4q12	0.25	1
TTN	Del_16q23.1	0.25	1
COL3A1	Amp_12q14.1	0.251	1
COL3A1	Del_16p13.3	0.251	1
EPHA4	Amp_1q44	0.251	1
MYO3B	14q-Del	0.251	1
MYO3B	Del_9p21.3	0.251	1
NRAS	PTPN11	0.251	1
C15orf23	Del_10p15.3	0.252	1
C15orf23	Del_10q26.3	0.252	1
CCK	11q-Del	0.252	1
GNAQ	11q-Del	0.252	1
GUCY2F	Del_10p15.3	0.252	1
GUCY2F	Del_10q26.3	0.252	1
HSD11B1	Del_11q23.3	0.252	1
MAN1A1	Del_10q21.1	0.252	1
RELN	Del_6q26	0.252	1
ZFX	Del_10q21.1	0.252	1
MLL	5q-Del	0.253	1
RELN	11p-Del	0.253	1
6q-Del	Del_2q37.3	0.253	1
Amp_22q13.2	Del_9p23	0.253	1
CNTN5	5q-Del	0.254	1
USH2A	Del_10p15.3	0.254	1
ALPK2	8q-Amp	0.255	1
CTNNA3	9p-Del	0.255	1
DCLK3	20p-Amp	0.255	1
NBPF1	Del_2q37.3	0.255	1
TP63	Amp_22q13.2	0.255	1
DSG3	IDH1	0.256	1
DSG3	Amp_4q12	0.256	1
IDH1	11p-Del	0.256	1
MAN1A1	11p-Del	0.256	1
ZFX	11p-Del	0.256	1
6p-Amp	Amp_1p12	0.256	1
OR4S2	Del_6q26	0.257	1
THSD7B	Del_1p22.1	0.257	1
THSD7B	Del_4p16.3	0.257	1
Del_13q34	Del_15q21.1	0.257	1
C15orf23	Del_8p23.3	0.258	1
CBL	20q-Amp	0.258	1
DMC1	MYO16	0.258	1
FLT1	Amp_6p24.3	0.258	1
KEL	Amp_6p24.3	0.258	1
MLL	RQCD1	0.258	1
MYO3B	PTEN	0.258	1
PARM1	Del_15q21.1	0.258	1
Amp_1q21.3	Del_16p13.3	0.258	1
ACSBG1	Del_12q23.3	0.259	1
ACSBG1	Del_13q34	0.259	1
ATP5F1	7q-Amp	0.259	1
CCNA1	11q-Del	0.259	1
CDC42BPA	11q-Del	0.259	1
GLI1	11q-Del	0.259	1
KRAS	7q-Amp	0.259	1
MLL	Amp_12q14.1	0.259	1
TTN	Del_10q23.31	0.259	1
20q-Amp	Del_16p13.3	0.259	1
CBL	Amp_7q34	0.26	1
CNTN5	Amp_1q21.3	0.26	1
DDX3X	Del_1p36.31	0.26	1
DDX3X	Del_4q34.3	0.26	1
MSTN	Del_1p36.31	0.26	1
MYO16	Del_16q12.1	0.26	1
NBPF1	Del_11q23.3	0.26	1
RAC1	Del_1p36.31	0.26	1
SLC38A4	Del_16q12.1	0.26	1
STK19	Amp_8q24.21	0.26	1
6p-Amp	Del_19p13.3	0.26	1
COL3A1	Amp_1q21.3	0.261	1
EPHA7	Del_10p15.3	0.261	1
EPHA6	8p-Amp	0.262	1
EPHA7	Del_1p22.1	0.262	1
MAN1A1	Del_6q21	0.262	1
MYO16	Del_4p16.3	0.262	1
Amp_22q13.2	Del_16q23.1	0.262	1
CDK4	SLC9A11	0.263	1
CNTN5	Amp_3p13	0.263	1
DCLK3	Amp_1p12	0.263	1
EPHA7	Del_10q23.31	0.263	1
KIT	Amp_3p13	0.263	1
KRT73	Amp_3p13	0.263	1
LGR6	10q-Del	0.263	1
NUDT11	6p-Amp	0.263	1
USP9X	Del_14q23.3	0.263	1
C15orf23	13q-Amp	0.264	1
CAMTA1	Del_6q26	0.264	1
CCK	Del_6q21	0.264	1
CCNA1	10p-Del	0.264	1
COL3A1	Del_16q24.3	0.264	1
CTNNA3	Del_9p23	0.264	1
EZH2	10p-Del	0.264	1
GUCY2F	13q-Amp	0.264	1
PARM1	13q-Amp	0.264	1
XIRP2	7p-Amp	0.264	1
CDK4	10p-Del	0.265	1
CPA3	Amp_12q14.1	0.265	1
CYP3A4	Amp_12q14.1	0.265	1
EPHA6	Del_4p16.3	0.265	1
IDH1	Del_3q13.31	0.265	1
LGR6	Amp_12q14.1	0.265	1
NAP1L2	Del_16q12.1	0.265	1
NUDT11	10p-Del	0.265	1
NUP214	Del_19p13.3	0.265	1
PPP6C	Amp_12q14.1	0.265	1
RPTN	22q-Amp	0.265	1
S100A8	10p-Del	0.265	1
TP53	Del_14q23.3	0.265	1
ZFX	Del_19p13.3	0.265	1
22q-Amp	Del_16q12.1	0.265	1
Amp_6q12	Del_16p13.3	0.265	1
ATP5F1	Del_5q31.3	0.266	1
CTNNA3	5q-Del	0.266	1
FAM58A	Del_5q31.3	0.266	1
KRAS	Del_5q31.3	0.266	1
TTN	20q-Amp	0.266	1
Amp_8q24.21	Del_2q37.3	0.266	1
ALPK2	Amp_4q12	0.267	1
BTK	Amp_20q13.33	0.267	1
CBL	Amp_1p12	0.267	1
COL3A1	16q-Del	0.267	1
IDH1	Amp_20q13.33	0.267	1
MLL	Amp_1q44	0.267	1
NGF	Del_15q13.3	0.267	1
THSD7B	Del_6q21	0.267	1
TP53	Amp_8q24.21	0.267	1
ZFX	Amp_20q13.33	0.267	1
CBL	9q-Del	0.268	1
OR4S2	6p-Del	0.268	1
USP9X	6p-Del	0.268	1
Amp_1q44	Del_Xp21.1	0.268	1
Amp_22q13.2	Del_1p36.31	0.268	1
CTNNA3	Del_11q23.3	0.269	1
KIT	7q-Amp	0.269	1
RQCD1	Del_6q21	0.269	1
USP17L2	9q-Del	0.269	1
9q-Del	Amp_13q31.3	0.269	1
ARID2	14q-Del	0.27	1
ARID2	Del_5q12.1	0.27	1
BRAF	GML	0.27	1
DMC1	Amp_17q25.3	0.27	1
DMC1	Del_4p16.3	0.27	1
HSD11B1	8q-Amp	0.27	1
KRTAP5-10	5q-Del	0.27	1
MYO3B	Del_4q34.3	0.27	1
STK19	8q-Amp	0.27	1
ZNF780B	5q-Del	0.27	1
FLT1	Del_15q21.1	0.271	1
RPTN	Amp_7q34	0.271	1
ZFX	Del_10p15.3	0.271	1
APC	20q-Amp	0.272	1
C10orf54	Del_16q23.1	0.272	1
KCND2	6p-Amp	0.272	1
NF1	Del_9p21.3	0.272	1
OXA1L	Del_16q23.1	0.272	1
Amp_6p24.3	Del_13q34	0.272	1
ACSBG1	20p-Amp	0.273	1
ACSBG1	18p-Del	0.273	1
APCS	18p-Del	0.273	1
GUCY2F	14q-Del	0.273	1
IGF1R	Del_2q37.3	0.273	1
KYNU	Amp_13q31.3	0.273	1
MAP2K1	TPTE	0.273	1
SYK	20p-Amp	0.273	1
XIRP2	Del_9p23	0.273	1
13q-Amp	Del_5q12.1	0.273	1
22q-Amp	Del_9p23	0.273	1
GML	Del_10q21.1	0.274	1
KEL	7p-Amp	0.274	1
POTEG	Del_10q23.31	0.274	1
RELN	Del_2q37.3	0.274	1
STK19	Del_6q26	0.274	1
DCLK3	8p-Amp	0.275	1
DCLK3	Del_5p15.31	0.275	1
MLL	16q-Del	0.275	1
MLL	Del_16q12.1	0.275	1
NBPF1	Del_5p15.31	0.275	1
PTPN22	20p-Amp	0.275	1
PTPN22	18p-Del	0.275	1
RPTN	20q-Amp	0.275	1
RPTN	Amp_5p15.33	0.275	1
STK19	22q-Amp	0.275	1
20q-Amp	Del_14q23.3	0.275	1
8p-Amp	Del_2q37.3	0.275	1
ATP5F1	9p-Del	0.276	1
CCK	9p-Del	0.276	1
DDX3X	5q-Del	0.276	1
FAM58A	9p-Del	0.276	1
GNAQ	9p-Del	0.276	1
KCND2	Amp_8q24.21	0.276	1
NGF	6q-Del	0.276	1
OR6C74	6q-Del	0.276	1
RAC1	5q-Del	0.276	1
RQCD1	6q-Del	0.276	1
ZNF780B	10q-Del	0.276	1
5q-Del	Amp_6q12	0.276	1
APC	9q-Del	0.277	1
COL3A1	Amp_1p12	0.277	1
NGF	Del_15q21.1	0.277	1
NRAS	10q-Del	0.277	1
PDGFRA	Amp_1q21.3	0.277	1
PTEN	Del_13q34	0.277	1
RELN	Del_6q21	0.277	1
TTN	Amp_3p13	0.277	1
CAMTA1	Del_10q21.1	0.278	1
THSD7B	Del_6q26	0.278	1
TPTE	6p-Del	0.278	1
USP9X	1q-Amp	0.278	1
6q-Del	Amp_22q13.2	0.278	1
Amp_6p24.3	Del_19p13.3	0.278	1
ANO4	IDH1	0.279	1
ANO4	Amp_12q15	0.279	1
GLI1	Del_5q31.3	0.279	1
NBPF1	Del_16q24.3	0.279	1
PDGFRA	7p-Amp	0.279	1
SLC9A11	Del_8p23.3	0.279	1
TPTE	8p-Amp	0.279	1
EPHA7	1q-Amp	0.28	1
FRMPD4	Del_3q13.31	0.28	1
MYO3B	Del_3q13.31	0.28	1
PDGFRA	10q-Del	0.28	1
USP17L2	Del_10p15.3	0.28	1
C10orf54	Del_14q23.3	0.281	1
C10orf54	Del_16q12.1	0.281	1
CDK4	RPTN	0.281	1
FGFR2	Del_8p23.3	0.281	1
FLT1	Del_9p21.3	0.281	1
NBPF1	Del_8p23.3	0.281	1
NF1	20p-Amp	0.281	1
NF1	18p-Del	0.281	1
NUDT11	RPTN	0.281	1
NUDT11	Del_14q23.3	0.281	1
S100A8	Del_14q23.3	0.281	1
S100A8	Del_16q12.1	0.281	1
SELP	6p-Del	0.281	1
SELP	Amp_11q13.3	0.281	1
SLC38A4	Amp_11q13.3	0.281	1
USH2A	Del_16p13.3	0.281	1
ZFX	9p-Del	0.281	1
Amp_8q24.21	Amp_12q14.1	0.281	1
ACSBG1	Amp_7q34	0.282	1
ATP5F1	Del_10q23.31	0.282	1
BRAF	CTNNA3	0.282	1
CCK	Del_10q23.31	0.282	1
CTNNA3	Amp_1q21.3	0.282	1
DMC1	KCND2	0.282	1
FAM58A	Del_10q23.31	0.282	1
KRAS	Del_10q23.31	0.282	1
THSD7B	11p-Del	0.282	1
USP17L2	Del_6q26	0.282	1
ANO4	Del_16q23.1	0.284	1
C15orf23	Amp_12q14.1	0.284	1
C15orf23	Del_16p13.3	0.284	1
CDC42BPA	9p-Del	0.284	1
CYP3A4	Amp_6p24.3	0.284	1
KIT	9p-Del	0.284	1
NGF	9p-Del	0.284	1
RPTN	Amp_17q25.3	0.285	1
RPTN	Del_4p16.3	0.285	1
Amp_17q25.3	Del_14q23.3	0.285	1
Amp_17q25.3	Del_16q12.1	0.285	1
ALPK2	Amp_1q44	0.286	1
ALPK2	Del_9p21.3	0.286	1
CTNNA3	16q-Del	0.286	1
DDX3X	Del_11q23.3	0.286	1
EMG1	Amp_22q13.2	0.286	1
MYO3B	10q-Del	0.286	1
OR4S2	Amp_6q12	0.286	1
RPTN	Amp_20q13.33	0.286	1
RPTN	Amp_22q13.2	0.286	1
16q-Del	Amp_3p13	0.286	1
ACSBG1	8p-Amp	0.287	1
ACSBG1	Del_5p15.31	0.287	1
APCS	8p-Amp	0.287	1
APCS	Del_5p15.31	0.287	1
ARID2	RB1	0.287	1
BTK	Del_9p23	0.287	1
FRMPD4	Del_5q31.3	0.287	1
IGF1R	Del_5p15.31	0.287	1
MAN1A1	Del_9p23	0.287	1
NF1	Amp_12q14.1	0.287	1
NF1	Del_16p13.3	0.287	1
NGF	Del_5q12.1	0.287	1
NUDT11	Amp_6p24.3	0.287	1
PTPN11	Amp_6p24.3	0.287	1
RQCD1	14q-Del	0.287	1
ANO4	Del_1p36.31	0.288	1
ANO4	Del_4q34.3	0.288	1
C15orf23	Del_1p36.31	0.288	1
FLT1	13q-Amp	0.288	1
GUCY2F	Del_4q34.3	0.288	1
KIT	Del_13q34	0.288	1
NF1	9q-Del	0.288	1
PARM1	Del_1p36.31	0.288	1
PARM1	Del_4q34.3	0.288	1
13q-Amp	Del_4q34.3	0.288	1
7p-Amp	Del_16q24.3	0.288	1
CDKN2A	11p-Del	0.289	1
MSTN	Del_9p23	0.289	1
PDGFRA	Amp_1p12	0.289	1
PTPN22	Amp_1p12	0.289	1
Amp_1q21.3	Del_14q23.3	0.289	1
CTNNB1	EPHA4	0.29	1
CTNNB1	6p-Del	0.29	1
EPHA4	Amp_15q26.2	0.29	1
HSD11B1	Del_3q13.31	0.29	1
KYNU	6p-Del	0.29	1
KYNU	Amp_11q13.3	0.29	1
MAP2K1	6p-Del	0.29	1
MAP2K1	Amp_11q13.3	0.29	1
SLC38A4	Del_16q24.3	0.29	1
STK19	Del_3q13.31	0.29	1
USP9X	17p-Del	0.29	1
6p-Del	Amp_15q26.2	0.29	1
Amp_6p24.3	Del_16q24.3	0.29	1
APC	6q-Del	0.291	1
DSG3	Amp_11q13.3	0.291	1
EZH2	Amp_6p24.3	0.291	1
IDH1	Del_10q23.31	0.291	1
MAN1A1	Del_10q23.31	0.291	1
NRAS	NUP214	0.291	1
OR6C74	Del_10q23.31	0.291	1
RB1	Del_10q23.31	0.291	1
RIPK4	Amp_6p24.3	0.291	1
TP53	6p-Del	0.291	1
8p-Amp	6q-Del	0.291	1
Amp_1q44	Del_19p13.3	0.291	1
DMC1	Del_6q26	0.292	1
EPHA6	14q-Del	0.292	1
EPHA6	Del_5q12.1	0.292	1
LGR6	16q-Del	0.292	1
RPTN	Del_3q13.31	0.292	1
RPTN	Del_19p13.3	0.292	1
16q-Del	Amp_6q12	0.292	1
HRAS	Del_11q23.3	0.293	1
NRAS	Amp_5p15.33	0.293	1
NRAS	Amp_22q13.2	0.293	1
CCK	Del_10q26.3	0.294	1
EPHA6	GNAQ	0.294	1
FAM58A	Del_10q26.3	0.294	1
KRAS	Del_10q26.3	0.294	1
THSD7B	7p-Amp	0.294	1
USP17L2	1q-Amp	0.294	1
XIRP2	Del_5q31.3	0.294	1
Amp_1q21.3	Del_Xp21.1	0.294	1
Amp_1q44	Del_16q23.1	0.294	1
CDK4	Amp_1q44	0.295	1
KYNU	Del_14q23.3	0.295	1
LGR6	Del_16q24.3	0.295	1
NBPF1	Amp_7p22.1	0.295	1
NUDT11	Amp_1q44	0.295	1
PPP6C	8q-Amp	0.295	1
USP17L2	Amp_8q24.21	0.295	1
Amp_6q12	Del_16q24.3	0.295	1
Amp_15q26.2	Del_14q23.3	0.295	1
APCS	10q-Del	0.296	1
PARM1	Del_9p21.3	0.296	1
PDGFRA	Del_5p15.31	0.296	1
PTPN22	Del_5p15.31	0.296	1
SYK	10q-Del	0.296	1
TRERF1	Del_5p15.31	0.296	1
BRAF	FLT1	0.297	1
BRAF	KEL	0.297	1
CDKN2A	Amp_5p15.33	0.297	1
FGFR2	22q-Amp	0.297	1
GUCY2F	10p-Del	0.297	1
MAN1A1	Amp_13q31.3	0.297	1
NUP214	Amp_13q31.3	0.297	1
USH2A	Del_13q34	0.297	1
Amp_4q12	Amp_13q31.3	0.297	1
Amp_12q15	Amp_13q31.3	0.297	1
CBL	Del_1p36.31	0.298	1
COL3A1	11q-Del	0.298	1
FLT1	NGF	0.298	1
FLT1	RB1	0.298	1
NAP1L2	20q-Amp	0.298	1
NAP1L2	17p-Del	0.298	1
NGF	Del_4q34.3	0.298	1
OR6C74	Del_4q34.3	0.298	1
PTEN	Amp_5p15.33	0.298	1
RPTN	Amp_1p12	0.298	1
RQCD1	Del_1p36.31	0.298	1
BRAF	Amp_4q12	0.299	1
DCLK3	Del_6q26	0.299	1
EPHA6	Amp_7q34	0.299	1
MPP7	6p-Del	0.299	1
MPP7	Amp_11q13.3	0.299	1
MYO16	Amp_5p15.33	0.299	1
CCNA1	Amp_1q44	0.3	1
DCLK3	14q-Del	0.3	1
DSG3	Amp_20q13.33	0.3	1
MLL	NUDT11	0.3	1
NBPF1	14q-Del	0.3	1
NUDT11	17p-Del	0.3	1
OXA1L	Amp_5p15.33	0.3	1
POTEG	Del_10q26.3	0.3	1
PTPN11	20q-Amp	0.3	1
RB1	Amp_7p22.1	0.3	1
S100A8	Amp_5p15.33	0.3	1
TPTE	Amp_5p15.33	0.3	1
USH2A	Del_6q21	0.3	1
DSG3	16q-Del	0.301	1
USH2A	Del_15q21.1	0.301	1
ACSBG1	PTEN	0.302	1
C7orf58	Amp_12q14.1	0.302	1
CCNA1	POTEG	0.302	1
CCNA1	20p-Amp	0.302	1
CDC42BPA	18p-Del	0.302	1
CDC42BPA	Del_2q37.3	0.302	1
EZH2	FGFR2	0.302	1
EZH2	POTEG	0.302	1
EZH2	20p-Amp	0.302	1
EZH2	18p-Del	0.302	1
IGF1R	22q-Amp	0.302	1
KRT73	Del_2q37.3	0.302	1
PTEN	SYK	0.302	1
RIPK4	20p-Amp	0.302	1
RIPK4	18p-Del	0.302	1
TTN	11p-Del	0.302	1
Amp_6p24.3	Del_5q31.3	0.302	1
KCND2	Amp_6p24.3	0.303	1
MYO3B	9p-Del	0.303	1
CAMTA1	Del_10p15.3	0.304	1
TTN	Del_6q26	0.304	1
XIRP2	Amp_1q44	0.304	1
13q-Amp	5q-Del	0.304	1
22q-Amp	Del_10p15.3	0.304	1
6p-Amp	14q-Del	0.304	1
C15orf23	USP9X	0.305	1
FGFR2	1q-Amp	0.305	1
KCND2	Del_1p22.1	0.305	1
KRTAP5-10	Amp_17q25.3	0.305	1
MAN1A1	6p-Amp	0.305	1
SLC27A5	Del_1p22.1	0.305	1
SLC27A5	Del_4p16.3	0.305	1
SLC9A11	7q-Amp	0.305	1
6p-Amp	Amp_12q15	0.305	1
Amp_7q34	Del_5q12.1	0.305	1
Amp_8q24.21	Del_5p15.31	0.305	1
ALPK2	6p-Del	0.306	1
ALPK2	Amp_11q13.3	0.306	1
CNTN5	Del_15q21.1	0.306	1
EPHA4	Amp_20q13.33	0.306	1
EPHA7	Amp_7q34	0.306	1
MYO16	Amp_3p13	0.306	1
MYO16	Amp_7q34	0.306	1
OR6C74	Del_10q26.3	0.306	1
6p-Del	Amp_22q13.2	0.306	1
Amp_8q24.21	Del_Xp21.1	0.306	1
DMC1	11q-Del	0.307	1
KCND2	Amp_7p22.1	0.307	1
TRERF1	Del_11q23.3	0.307	1
EPHA7	Amp_6q12	0.308	1
SELP	Amp_6q12	0.308	1
BRAF	OR4S2	0.309	1
CBL	5q-Del	0.309	1
CTNNB1	DDX3X	0.309	1
CYP3A4	Amp_15q26.2	0.309	1
HSD11B1	Del_10q21.1	0.309	1
LGR6	Amp_15q26.2	0.309	1
NGF	5q-Del	0.309	1
TP63	Del_5q31.3	0.309	1
USP17L2	Amp_3p13	0.309	1
ACSBG1	8q-Amp	0.31	1
ALPK2	Del_10q26.3	0.31	1
C10orf54	Amp_1p12	0.31	1
C10orf54	Del_15q13.3	0.31	1
CDC42BPA	Del_10q26.3	0.31	1
KIT	Del_10q26.3	0.31	1
NRAS	Del_16q24.3	0.31	1
OXA1L	Del_15q13.3	0.31	1
PDGFRA	8q-Amp	0.31	1
RELN	Del_1p36.31	0.31	1
S100A8	Amp_1p12	0.31	1
S100A8	Del_15q13.3	0.31	1
8p-Amp	Del_16q24.3	0.31	1
8q-Amp	Del_5p15.31	0.31	1
BTK	Del_10q26.3	0.311	1
FRMPD4	NRAS	0.311	1
IDH1	10p-Del	0.311	1
TPTE	Amp_3p13	0.311	1
XIRP2	5q-Del	0.311	1
ZFX	10p-Del	0.311	1
Amp_3p13	Del_9p21.3	0.311	1
ACSBG1	Amp_8q24.21	0.312	1
APC	9p-Del	0.312	1
CDK4	Del_6q26	0.312	1
NRAS	Del_10q21.1	0.312	1
NUDT11	Del_6q26	0.312	1
S100A8	Del_6q26	0.312	1
SLC27A5	7p-Amp	0.312	1
THSD7B	Del_3q13.31	0.312	1
THSD7B	Del_19p13.3	0.312	1
ZNF780B	7p-Amp	0.312	1
FGFR2	11p-Del	0.313	1
TP53	Del_2q37.3	0.313	1
6p-Del	Amp_1q21.3	0.313	1
ACSBG1	Del_11q23.3	0.314	1
BTK	Amp_11q13.3	0.314	1
DSG3	20q-Amp	0.314	1
DSG3	Amp_5p15.33	0.314	1
IDH1	6p-Del	0.314	1
MAN1A1	Amp_11q13.3	0.314	1
NUP214	6p-Del	0.314	1
TRERF1	10p-Del	0.314	1
ZFX	6p-Del	0.314	1
ZFX	Amp_11q13.3	0.314	1
11p-Del	Amp_5p15.33	0.314	1
CAMTA1	7p-Amp	0.315	1
EPHA6	Del_14q23.3	0.315	1
PTEN	TPTE	0.315	1
TPTE	22q-Amp	0.315	1
KCND2	6p-Del	0.316	1
KCND2	Amp_11q13.3	0.316	1
NAP1L2	Del_15q13.3	0.316	1
PTEN	Amp_1p12	0.316	1
SLC9A11	Del_10q26.3	0.316	1
22q-Amp	Del_15q13.3	0.316	1
ACSBG1	Del_3q13.31	0.317	1
ACSBG1	Del_19p13.3	0.317	1
APCS	Del_3q13.31	0.317	1
BTK	Del_9p21.3	0.317	1
CCNA1	8p-Amp	0.317	1
CCNA1	Del_5p15.31	0.317	1
CDC42BPA	8p-Amp	0.317	1
CDC42BPA	Del_5p15.31	0.317	1
EZH2	TRERF1	0.317	1
EZH2	8p-Amp	0.317	1
EZH2	Del_5p15.31	0.317	1
GLI1	Del_5p15.31	0.317	1
IGF1R	Del_3q13.31	0.317	1
MAN1A1	Del_9p21.3	0.317	1
NUP214	Del_9p21.3	0.317	1
TP53	11q-Del	0.317	1
16q-Del	Del_8p23.3	0.317	1
Amp_7p22.1	Del_Xp21.1	0.317	1
APC	PTEN	0.318	1
ATP5F1	8q-Amp	0.318	1
BRAF	PARM1	0.318	1
C15orf23	10q-Del	0.318	1
CCK	Del_16q24.3	0.318	1
FAM58A	8q-Amp	0.318	1
FAM58A	Del_16q24.3	0.318	1
FLT1	Amp_12q14.1	0.318	1
FLT1	Del_16p13.3	0.318	1
GUCY2F	10q-Del	0.318	1
IDH1	7p-Amp	0.318	1
KEL	Amp_12q14.1	0.318	1
MYO3B	Del_10q23.31	0.318	1
NAP1L2	9q-Del	0.318	1
OR4S2	Del_6q21	0.318	1
PARM1	10q-Del	0.318	1
PDGFRA	PTEN	0.318	1
PDGFRA	22q-Amp	0.318	1
PPP6C	7p-Amp	0.318	1
PTEN	9q-Del	0.318	1
TPTE	Amp_4q12	0.318	1
ZFX	7p-Amp	0.318	1
ZFX	Del_16q23.1	0.318	1
22q-Amp	Del_5p15.31	0.318	1
7p-Amp	Amp_6q12	0.318	1
Amp_3p13	Del_16q23.1	0.318	1
FGFR2	Del_4q34.3	0.319	1
FLT1	18p-Del	0.319	1
KEL	Del_2q37.3	0.319	1
THSD7B	Amp_22q13.2	0.319	1
TP63	Amp_17q25.3	0.319	1
XIRP2	Amp_15q26.2	0.319	1
C10orf54	Del_8p23.3	0.32	1
C10orf54	Del_15q21.1	0.32	1
CBL	16q-Del	0.32	1
CDK4	Del_15q21.1	0.32	1
DCLK3	Del_3q13.31	0.32	1
DCLK3	Del_19p13.3	0.32	1
FGFR2	Del_19p13.3	0.32	1
KYNU	1q-Amp	0.32	1
MAP2K1	1q-Amp	0.32	1
MLL	20q-Amp	0.32	1
MYO3B	Del_9p23	0.32	1
NF1	NUDT11	0.32	1
NGF	16q-Del	0.32	1
OXA1L	Del_15q21.1	0.32	1
S100A8	Del_8p23.3	0.32	1
S100A8	Del_15q21.1	0.32	1
SELP	Del_15q13.3	0.32	1
SLC38A4	Amp_1p12	0.32	1
SLC9A11	Amp_13q31.3	0.32	1
20q-Amp	17p-Del	0.32	1
17p-Del	Amp_5p15.33	0.32	1
C10orf28	Del_16q23.1	0.321	1
DMC1	Del_13q34	0.321	1
FGFR2	11q-Del	0.321	1
MYO3B	9q-Del	0.321	1
16q-Del	Amp_22q13.2	0.321	1
EPHA7	Amp_1q21.3	0.322	1
SLC38A4	Amp_1q21.3	0.322	1
XIRP2	6p-Amp	0.322	1
CTNNB1	MLL	0.323	1
CTNNB1	Amp_5p15.33	0.323	1
MAP2K1	MLL	0.323	1
MAP2K1	17p-Del	0.323	1
MAP2K1	Amp_5p15.33	0.323	1
NF1	Del_14q23.3	0.323	1
RPTN	Del_15q21.1	0.323	1
SELP	10p-Del	0.323	1
USP17L2	7q-Amp	0.323	1
ALPK2	Amp_22q13.2	0.324	1
THSD7B	9p-Del	0.324	1
TPTE	6p-Amp	0.324	1
XIRP2	Amp_22q13.2	0.324	1
Amp_15q26.2	Del_6q26	0.324	1
ANO4	11p-Del	0.325	1
DDX3X	11p-Del	0.325	1
DSG3	Amp_6q12	0.325	1
LGR6	11p-Del	0.325	1
MLL	Del_1p22.1	0.325	1
USP17L2	10q-Del	0.325	1
20q-Amp	Del_4p16.3	0.325	1
ARID2	Del_5p15.31	0.326	1
BRAF	6p-Del	0.326	1
CPA3	Del_4p16.3	0.326	1
CYP3A4	Amp_17q25.3	0.326	1
CYP3A4	Del_1p22.1	0.326	1
DDX3X	Amp_17q25.3	0.326	1
DDX3X	Del_4p16.3	0.326	1
GML	10p-Del	0.326	1
LGR6	Amp_17q25.3	0.326	1
LGR6	Del_4p16.3	0.326	1
NRAS	Amp_12q14.1	0.326	1
NRAS	Del_16p13.3	0.326	1
OR4S2	Amp_12q14.1	0.326	1
OR4S2	Del_16p13.3	0.326	1
PDGFRA	Del_10q23.31	0.326	1
RAC1	Amp_17q25.3	0.326	1
RAC1	Del_1p22.1	0.326	1
TRERF1	Del_10q23.31	0.326	1
USP9X	Del_16p13.3	0.326	1
DMC1	Del_5q31.3	0.327	1
EPHA6	Amp_12q14.1	0.327	1
EPHA6	Del_16p13.3	0.327	1
EPHA6	Del_19p13.3	0.327	1
MLL	Del_3q13.31	0.327	1
SLC9A11	Del_10q21.1	0.327	1
USH2A	6p-Amp	0.327	1
Amp_5p15.33	Del_19p13.3	0.327	1
C15orf23	KYNU	0.328	1
C15orf23	Amp_15q26.2	0.328	1
CTNNA3	Del_1p22.1	0.328	1
GUCY2F	MAP2K1	0.328	1
KYNU	13q-Amp	0.328	1
MPP7	Amp_3p13	0.328	1
HSD11B1	Del_10p15.3	0.329	1
IGF1R	Del_9p21.3	0.329	1
KRTAP5-10	Amp_3p13	0.329	1
MSTN	Amp_3p13	0.329	1
SLC27A5	Amp_3p13	0.329	1
TP53	9p-Del	0.329	1
USH2A	16q-Del	0.329	1
ZNF780B	Amp_3p13	0.329	1
10p-Del	Amp_5p15.33	0.329	1
ANO4	Amp_8q24.21	0.33	1
C10orf28	Del_14q23.3	0.33	1
C10orf28	Del_16q12.1	0.33	1
CAMTA1	10q-Del	0.33	1
COL3A1	Del_1p22.1	0.33	1
PPP6C	9p-Del	0.33	1
9p-Del	Amp_6q12	0.33	1
Amp_11q13.3	Del_10p15.3	0.33	1
ALPK2	20p-Amp	0.331	1
C10orf54	14q-Del	0.331	1
C7orf58	CDK4	0.331	1
C7orf58	NUDT11	0.331	1
CDC42BPA	Del_9p23	0.331	1
CNTN5	Amp_6p24.3	0.331	1
DCLK3	Amp_20q13.33	0.331	1
MAN1A1	Del_14q23.3	0.331	1
NUDT11	14q-Del	0.331	1
NUP214	Del_16q12.1	0.331	1
OXA1L	Del_5q12.1	0.331	1
POTEG	Amp_20q13.33	0.331	1
POTEG	Amp_22q13.2	0.331	1
PTPN11	Del_5q12.1	0.331	1
RPTN	Amp_4q12	0.331	1
RPTN	Amp_12q15	0.331	1
S100A8	14q-Del	0.331	1
S100A8	Del_5q12.1	0.331	1
STK19	Del_6q21	0.331	1
Amp_4q12	Del_14q23.3	0.331	1
CBL	SELP	0.332	1
CCNA1	NAP1L2	0.332	1
CDC42BPA	22q-Amp	0.332	1
EZH2	NAP1L2	0.332	1
EZH2	22q-Amp	0.332	1
GLI1	PTEN	0.332	1
KIT	PTEN	0.332	1
KRT73	22q-Amp	0.332	1
KYNU	11q-Del	0.332	1
NRAS	Del_15q13.3	0.332	1
PARM1	8q-Amp	0.332	1
RB1	SELP	0.332	1
RQCD1	SELP	0.332	1
RQCD1	SLC38A4	0.332	1
TPTE	Amp_1p12	0.332	1
ATP5F1	10q-Del	0.333	1
CCK	10q-Del	0.333	1
CPA3	IDH1	0.333	1
CPA3	Amp_4q12	0.333	1
DDX3X	IDH1	0.333	1
DDX3X	NUP214	0.333	1
FAM58A	10q-Del	0.333	1
KRAS	10q-Del	0.333	1
LGR6	Amp_4q12	0.333	1
LGR6	Amp_12q15	0.333	1
MAN1A1	Amp_6q12	0.333	1
NUP214	Amp_6q12	0.333	1
TP63	Amp_8q24.21	0.333	1
ACSBG1	11p-Del	0.334	1
CCK	11p-Del	0.334	1
CDK4	9q-Del	0.334	1
EPHA6	Amp_1q44	0.334	1
FAM58A	11p-Del	0.334	1
GNAQ	11p-Del	0.334	1
KRAS	11p-Del	0.334	1
NUDT11	Amp_1q21.3	0.334	1
PTPN11	9q-Del	0.334	1
S100A8	9q-Del	0.334	1
USP9X	14q-Del	0.334	1
5q-Del	Amp_12q14.1	0.334	1
DCLK3	GML	0.335	1
DMC1	18p-Del	0.335	1
DMC1	Del_2q37.3	0.335	1
EPHA4	Amp_3p13	0.335	1
GML	NBPF1	0.335	1
GML	Del_2q37.3	0.335	1
NAP1L2	Del_8p23.3	0.335	1
NF1	PTEN	0.335	1
NF1	22q-Amp	0.335	1
PDGFRA	Amp_7p22.1	0.335	1
Amp_7p22.1	Del_5p15.31	0.335	1
USP9X	Del_10q21.1	0.336	1
ALPK2	20q-Amp	0.337	1
ARID2	11q-Del	0.337	1
FRMPD4	6q-Del	0.337	1
MLL	Amp_22q13.2	0.337	1
THSD7B	17p-Del	0.337	1
USP17L2	Del_16q23.1	0.337	1
17p-Del	Amp_20q13.33	0.337	1
BRAF	CAMTA1	0.338	1
CTNNA3	Del_16q12.1	0.338	1
CTNNB1	Amp_1p12	0.338	1
KEL	5q-Del	0.338	1
MAP2K1	Amp_1p12	0.338	1
MAP2K1	Del_15q13.3	0.338	1
Amp_3p13	Del_14q23.3	0.338	1
CDC42BPA	Amp_7q34	0.339	1
FGFR2	5q-Del	0.339	1
KRT73	Amp_7q34	0.339	1
USH2A	Amp_22q13.2	0.339	1
ALPK2	Amp_6q12	0.34	1
CAMTA1	PTEN	0.34	1
CNTN5	Del_5q12.1	0.34	1
CPA3	Amp_20q13.33	0.34	1
CYP3A4	Amp_20q13.33	0.34	1
HSD11B1	6p-Del	0.34	1
HSD11B1	Amp_11q13.3	0.34	1
LGR6	Amp_22q13.2	0.34	1
NAP1L2	PTEN	0.34	1
NAP1L2	22q-Amp	0.34	1
STK19	6p-Del	0.34	1
TTN	Del_16q12.1	0.34	1
USP9X	9p-Del	0.34	1
MYO3B	10p-Del	0.341	1
PTPN22	1q-Amp	0.341	1
TRERF1	1q-Amp	0.341	1
TRERF1	Del_3q13.31	0.341	1
TRERF1	Del_19p13.3	0.341	1
ANO4	16q-Del	0.342	1
BRAF	GNAQ	0.342	1
BRAF	KRAS	0.342	1
C10orf54	Del_1p36.31	0.342	1
C10orf54	Del_4q34.3	0.342	1
C15orf23	Del_11q23.3	0.342	1
CDK4	FLT1	0.342	1
CDK4	KEL	0.342	1
CDK4	Del_1p36.31	0.342	1
COL3A1	Del_16q12.1	0.342	1
DMC1	Del_9p21.3	0.342	1
KEL	Amp_7q34	0.342	1
NUDT11	Del_1p36.31	0.342	1
RELN	Amp_4q12	0.342	1
RPTN	11q-Del	0.342	1
S100A8	Del_4q34.3	0.342	1
SLC38A4	Del_8p23.3	0.342	1
ALPK2	KRAS	0.343	1
BRAF	DCLK3	0.343	1
CDK4	6q-Del	0.343	1
EPHA6	6q-Del	0.343	1
FAM58A	Amp_22q13.2	0.343	1
GNAQ	Amp_20q13.33	0.343	1
LGR6	Del_10q23.31	0.343	1
OXA1L	6q-Del	0.343	1
POTEG	Del_10q21.1	0.343	1
PTEN	TP63	0.343	1
PTEN	Del_16q24.3	0.343	1
S100A8	6q-Del	0.343	1
SLC27A5	Del_10q21.1	0.343	1
THSD7B	Amp_3p13	0.343	1
USH2A	20p-Amp	0.343	1
USH2A	14q-Del	0.343	1
CBL	CNTN5	0.344	1
CBL	Del_1p22.1	0.344	1
CBL	Del_4p16.3	0.344	1
MAN1A1	Amp_6p24.3	0.344	1
MPP7	RB1	0.344	1
NGF	Del_1p22.1	0.344	1
RB1	Del_1p22.1	0.344	1
RQCD1	Del_1p22.1	0.344	1
XIRP2	22q-Amp	0.344	1
APC	11p-Del	0.345	1
KCND2	9p-Del	0.345	1
MAP2K1	7q-Amp	0.345	1
PTPN22	11p-Del	0.345	1
TP53	8p-Amp	0.345	1
CDKN2A	Amp_4q12	0.346	1
FLT1	8p-Amp	0.346	1
GUCY2F	Amp_1q44	0.346	1
PARM1	Amp_1q44	0.346	1
TPTE	Amp_1q21.3	0.346	1
11q-Del	Amp_22q13.2	0.346	1
Amp_3p13	Amp_7p22.1	0.346	1
Amp_7q34	Del_12q23.3	0.346	1
ACSBG1	Amp_20q13.33	0.347	1
CCNA1	Del_3q13.31	0.347	1
CDC42BPA	Del_3q13.31	0.347	1
CDC42BPA	Del_19p13.3	0.347	1
CNTN5	Del_Xp21.1	0.347	1
EZH2	Del_19p13.3	0.347	1
FAM58A	Del_11q23.3	0.347	1
FRMPD4	Del_10q26.3	0.347	1
IGF1R	Amp_20q13.33	0.347	1
KRAS	Del_11q23.3	0.347	1
KRT73	Del_3q13.31	0.347	1
RIPK4	Del_3q13.31	0.347	1
RIPK4	Del_19p13.3	0.347	1
COL3A1	6p-Del	0.348	1
RPTN	Del_5q12.1	0.348	1
THSD7B	Del_16q23.1	0.348	1
ANO4	18p-Del	0.349	1
ANO4	Amp_22q13.2	0.349	1
APC	GML	0.349	1
APCS	Del_6q26	0.349	1
DMC1	Del_5p15.31	0.349	1
EPHA7	Amp_20q13.33	0.349	1
EPHA7	Amp_22q13.2	0.349	1
GML	8p-Amp	0.349	1
MAP2K1	Amp_12q14.1	0.349	1
1q-Amp	Del_4q34.3	0.349	1
Amp_12q14.1	Amp_15q26.2	0.349	1
CDC42BPA	9q-Del	0.35	1
EMG1	Amp_5p15.33	0.35	1
GLI1	Amp_1q21.3	0.35	1
RIPK4	9q-Del	0.35	1
USH2A	8q-Amp	0.35	1
USH2A	Del_16q24.3	0.35	1
USP9X	Del_1p36.31	0.35	1
16q-Del	Amp_1q44	0.35	1
ACSBG1	Amp_13q31.3	0.351	1
C15orf23	Del_9p23	0.351	1
CYP3A5	USP17L2	0.351	1
EPHA6	9p-Del	0.351	1
IGF1R	Amp_13q31.3	0.351	1
OXA1L	Amp_8q24.21	0.351	1
PARM1	Del_9p23	0.351	1
S100A8	Amp_8q24.21	0.351	1
STK19	9p-Del	0.351	1
ZNF780B	1q-Amp	0.351	1
C15orf23	Amp_4q12	0.352	1
C15orf23	Amp_12q15	0.352	1
GUCY2F	Amp_4q12	0.352	1
KCND2	20q-Amp	0.352	1
MAN1A1	13q-Amp	0.352	1
NUP214	13q-Amp	0.352	1
OR4S2	Del_10q23.31	0.352	1
PARM1	ZFX	0.352	1
USP9X	Del_10q23.31	0.352	1
13q-Amp	Amp_4q12	0.352	1
13q-Amp	Amp_12q15	0.352	1
BRAF	THSD7B	0.353	1
MAP2K1	Del_8p23.3	0.353	1
MAP2K1	Del_15q21.1	0.353	1
OXA1L	5q-Del	0.353	1
PTPN11	5q-Del	0.353	1
S100A8	5q-Del	0.353	1
SLC9A11	Amp_11q13.3	0.353	1
USP9X	Amp_7p22.1	0.353	1
PDGFRA	Del_10q26.3	0.354	1
22q-Amp	14q-Del	0.354	1
BRAF	XIRP2	0.355	1
BTK	Amp_1q44	0.355	1
DCLK3	Del_5q31.3	0.355	1
DMC1	Amp_6p24.3	0.355	1
FGFR2	Del_5q31.3	0.355	1
GML	Amp_6p24.3	0.355	1
OR6C74	10q-Del	0.355	1
PARM1	Amp_17q25.3	0.355	1
PARM1	Del_1p22.1	0.355	1
SLC9A11	Del_16q12.1	0.355	1
TPTE	Del_3q13.31	0.355	1
ZFX	Amp_1q44	0.355	1
13q-Amp	Amp_17q25.3	0.355	1
13q-Amp	Del_4p16.3	0.355	1
ANO4	DDX3X	0.356	1
ANO4	Amp_6q12	0.356	1
CBL	Del_9p21.3	0.356	1
CCNA1	8q-Amp	0.356	1
CDC42BPA	Del_16q24.3	0.356	1
KIT	Del_16q24.3	0.356	1
KRT73	8q-Amp	0.356	1
KRTAP5-10	Del_13q34	0.356	1
NGF	Del_9p21.3	0.356	1
RIPK4	8q-Amp	0.356	1
RIPK4	Del_16q24.3	0.356	1
RQCD1	Del_9p21.3	0.356	1
SLC38A4	Del_13q34	0.356	1
ZNF780B	Del_12q23.3	0.356	1
CNTN5	Amp_1q44	0.357	1
HSD11B1	Del_16q23.1	0.357	1
KYNU	Amp_1q21.3	0.357	1
MAP2K1	9q-Del	0.357	1
MYO16	Amp_8q24.21	0.357	1
TRERF1	Del_6q26	0.357	1
TTN	Del_10p15.3	0.357	1
6p-Amp	Del_13q34	0.357	1
7q-Amp	Del_5q12.1	0.357	1
BRAF	9p-Del	0.358	1
CDK4	Del_6q21	0.358	1
NUDT11	Del_6q21	0.358	1
S100A8	Del_6q21	0.358	1
TRERF1	Amp_6p24.3	0.358	1
Amp_15q26.2	Del_5q31.3	0.358	1
APC	Del_9p23	0.359	1
DDX3X	HSD11B1	0.359	1
DSG3	Del_1p22.1	0.359	1
LGR6	Del_10q21.1	0.359	1
PTPN22	Del_9p23	0.359	1
STK19	Amp_6q12	0.359	1
11p-Del	Amp_17q25.3	0.359	1
ANO4	20q-Amp	0.36	1
BTK	Amp_5p15.33	0.36	1
FGFR2	16q-Del	0.36	1
IDH1	20q-Amp	0.36	1
IDH1	Amp_5p15.33	0.36	1
MAN1A1	20q-Amp	0.36	1
MLL	Amp_4q12	0.36	1
MLL	Amp_12q15	0.36	1
NUP214	17p-Del	0.36	1
OR4S2	Del_10p15.3	0.36	1
TTN	Amp_1p12	0.36	1
ZFX	20q-Amp	0.36	1
ZFX	17p-Del	0.36	1
ZFX	Amp_5p15.33	0.36	1
17p-Del	Amp_4q12	0.36	1
17p-Del	Amp_12q15	0.36	1
Amp_8q24.21	Del_5q12.1	0.36	1
KRTAP5-10	11q-Del	0.361	1
LGR6	Amp_1q21.3	0.361	1
22q-Amp	10p-Del	0.361	1
PARM1	7p-Amp	0.362	1
TP53	13q-Amp	0.362	1
ALPK2	8p-Amp	0.363	1
APC	Amp_22q13.2	0.363	1
CTNNA3	Amp_6q12	0.363	1
NAP1L2	Del_19p13.3	0.363	1
PDGFRA	Amp_22q13.2	0.363	1
PTEN	TTN	0.363	1
PTEN	Del_3q13.31	0.363	1
RAC1	Amp_3p13	0.363	1
22q-Amp	Del_3q13.31	0.363	1
22q-Amp	Del_19p13.3	0.363	1
ALPK2	Del_15q13.3	0.364	1
C10orf28	Amp_6p24.3	0.364	1
C10orf54	16q-Del	0.364	1
CAMTA1	GML	0.364	1
CDK4	16q-Del	0.364	1
DMC1	NAP1L2	0.364	1
DMC1	PTEN	0.364	1
EPHA7	Del_9p23	0.364	1
GML	PTEN	0.364	1
NF1	Del_19p13.3	0.364	1
OXA1L	16q-Del	0.364	1
S100A8	16q-Del	0.364	1
MYO16	Del_5q12.1	0.365	1
PDGFRA	5q-Del	0.366	1
PTPN22	5q-Del	0.366	1
SLC9A11	Del_10p15.3	0.366	1
8p-Amp	5q-Del	0.366	1
BTK	1q-Amp	0.367	1
CDC42BPA	10q-Del	0.367	1
IDH1	1q-Amp	0.367	1
KIT	10q-Del	0.367	1
MYO3B	Del_14q23.3	0.367	1
NUP214	1q-Amp	0.367	1
ACSBG1	Amp_11q13.3	0.368	1
APCS	Amp_11q13.3	0.368	1
C10orf54	Amp_7p22.1	0.368	1
EPHA7	Amp_12q14.1	0.368	1
IGF1R	6p-Del	0.368	1
RPTN	Amp_7p22.1	0.368	1
S100A8	Amp_7p22.1	0.368	1
SELP	Amp_12q14.1	0.368	1
THSD7B	Del_1p36.31	0.368	1
Amp_3p13	Del_6q21	0.368	1
ALPK2	Amp_7q34	0.369	1
ATP5F1	6p-Amp	0.369	1
C7orf58	CTNNB1	0.369	1
COL3A1	Del_1p36.31	0.369	1
CTNNA3	RB1	0.369	1
CTNNB1	Del_5q12.1	0.369	1
FAM58A	6p-Amp	0.369	1
FGFR2	Amp_13q31.3	0.369	1
KRAS	SLC9A11	0.369	1
KYNU	14q-Del	0.369	1
MPP7	Del_15q21.1	0.369	1
NGF	Amp_3p13	0.369	1
POTEG	Amp_13q31.3	0.369	1
RB1	Amp_3p13	0.369	1
USP17L2	18p-Del	0.369	1
USP17L2	Del_2q37.3	0.369	1
Amp_15q26.2	Del_5q12.1	0.369	1
C10orf28	NF1	0.37	1
DCLK3	SLC27A5	0.37	1
EPHA4	Del_16q23.1	0.37	1
FGFR2	SLC27A5	0.37	1
KRTAP5-10	Del_2q37.3	0.37	1
MSTN	Del_2q37.3	0.37	1
OR4S2	Amp_15q26.2	0.37	1
SLC27A5	20p-Amp	0.37	1
XIRP2	Del_11q23.3	0.37	1
ZNF780B	Del_2q37.3	0.37	1
BRAF	Del_16q23.1	0.371	1
GML	Del_10q23.31	0.371	1
GUCY2F	Del_6q21	0.371	1
RIPK4	Amp_8q24.21	0.371	1
TP63	Amp_12q14.1	0.371	1
Amp_12q14.1	Del_16q24.3	0.371	1
C10orf28	Del_9p21.3	0.372	1
EPHA6	20q-Amp	0.372	1
EPHA6	17p-Del	0.372	1
XIRP2	Amp_1q21.3	0.372	1
BTK	Amp_12q14.1	0.373	1
BTK	Del_16p13.3	0.373	1
IDH1	Amp_12q14.1	0.373	1
MAN1A1	Amp_12q14.1	0.373	1
MAN1A1	Del_16p13.3	0.373	1
NUDT11	9p-Del	0.373	1
NUP214	Del_16p13.3	0.373	1
OR6C74	7p-Amp	0.373	1
OXA1L	9p-Del	0.373	1
PTPN11	9p-Del	0.373	1
RELN	Amp_1p12	0.373	1
ZFX	Del_16p13.3	0.373	1
ACSBG1	Del_10q21.1	0.374	1
BTK	10q-Del	0.374	1
CAMTA1	Del_4q34.3	0.374	1
CNTN5	18p-Del	0.374	1
CPA3	Del_9p21.3	0.374	1
MAN1A1	10q-Del	0.374	1
PDGFRA	7q-Amp	0.374	1
PTPN22	7q-Amp	0.374	1
SYK	Del_10q21.1	0.374	1
TTN	Del_16q24.3	0.374	1
6q-Del	Amp_6q12	0.374	1
9p-Del	Amp_22q13.2	0.374	1
BRAF	MSTN	0.375	1
BRAF	SLC27A5	0.375	1
BTK	Del_15q13.3	0.375	1
EPHA7	7p-Amp	0.375	1
EPHA7	Amp_6p24.3	0.375	1
FLT1	Del_6q26	0.375	1
IDH1	Del_15q13.3	0.375	1
KCND2	Del_9p21.3	0.375	1
KEL	Del_6q26	0.375	1
LGR6	1q-Amp	0.375	1
MAN1A1	Amp_1p12	0.375	1
RPTN	Del_1p36.31	0.375	1
SLC38A4	7p-Amp	0.375	1
ZFX	Amp_1p12	0.375	1
ARID2	Del_10q26.3	0.376	1
C10orf54	MYO16	0.376	1
C10orf54	SELP	0.376	1
CDK4	MYO16	0.376	1
CDK4	SLC38A4	0.376	1
EPHA7	NUDT11	0.376	1
NUDT11	SELP	0.376	1
ALPK2	13q-Amp	0.377	1
C15orf23	Amp_20q13.33	0.377	1
GUCY2F	Amp_22q13.2	0.377	1
PARM1	Amp_20q13.33	0.377	1
C7orf58	Del_5q31.3	0.378	1
CCK	Del_16q23.1	0.378	1
CDK4	TTN	0.378	1
EPHA4	Del_5q31.3	0.378	1
FAM58A	Del_16q23.1	0.378	1
NUDT11	TTN	0.378	1
PTEN	11p-Del	0.378	1
Amp_7p22.1	Del_16q24.3	0.378	1
C15orf23	HSD11B1	0.379	1
C7orf58	Amp_1q44	0.379	1
GUCY2F	HSD11B1	0.379	1
KRTAP5-10	NRAS	0.379	1
MSTN	NRAS	0.379	1
USH2A	11q-Del	0.379	1
6q-Del	Amp_5p15.33	0.379	1
Amp_1q44	Del_5q12.1	0.379	1
ALPK2	Del_10p15.3	0.38	1
CCNA1	11p-Del	0.38	1
CDC42BPA	11p-Del	0.38	1
COL3A1	Amp_1q44	0.38	1
CTNNA3	Amp_5p15.33	0.38	1
DMC1	Del_3q13.31	0.38	1
GLI1	11p-Del	0.38	1
KIT	TP53	0.38	1
MLL	Amp_3p13	0.38	1
RELN	Del_Xp21.1	0.38	1
ZFX	11q-Del	0.38	1
Amp_20q13.33	Del_4p16.3	0.38	1
ARID2	C10orf28	0.381	1
ARID2	EMG1	0.381	1
C10orf28	14q-Del	0.381	1
C7orf58	EMG1	0.381	1
CCNA1	Amp_13q31.3	0.381	1
CDC42BPA	Amp_13q31.3	0.381	1
KRT73	Amp_13q31.3	0.381	1
PTPN11	Del_10q23.31	0.381	1
ANO4	8p-Amp	0.382	1
ANO4	Del_5p15.31	0.382	1
CTNNA3	Del_16q24.3	0.382	1
EPHA7	18p-Del	0.382	1
HSD11B1	Del_10q26.3	0.382	1
KRAS	THSD7B	0.382	1
KRTAP5-10	Del_5q31.3	0.382	1
MYO3B	RQCD1	0.382	1
NRAS	Del_19p13.3	0.382	1
1q-Amp	Del_9p21.3	0.382	1
Amp_3p13	Del_16q24.3	0.382	1
FLT1	Del_16q24.3	0.383	1
1q-Amp	5q-Del	0.383	1
ARID2	Del_19p13.3	0.384	1
DCLK3	Del_6q21	0.384	1
DSG3	8q-Amp	0.384	1
BRAF	RIPK4	0.385	1
FLT1	Amp_15q26.2	0.385	1
KEL	Amp_15q26.2	0.385	1
KRTAP5-10	8p-Amp	0.385	1
KYNU	Del_1p36.31	0.385	1
LGR6	Del_10p15.3	0.385	1
MAP2K1	Del_1p36.31	0.385	1
MAP2K1	Del_4q34.3	0.385	1
SLC27A5	8p-Amp	0.385	1
SLC9A11	16q-Del	0.385	1
ZNF780B	Del_5p15.31	0.385	1
ACSBG1	6p-Amp	0.386	1
MPP7	Amp_12q14.1	0.386	1
SYK	6p-Amp	0.386	1
Amp_17q25.3	Del_16p13.3	0.386	1
ACSBG1	DDX3X	0.387	1
ACSBG1	Amp_6q12	0.387	1
APCS	RAC1	0.387	1
CPA3	CYP3A5	0.387	1
CYP3A5	PPP6C	0.387	1
CYP3A5	Amp_6q12	0.387	1
RELN	Del_3q13.31	0.387	1
THSD7B	Amp_15q26.2	0.387	1
ATP5F1	Del_14q23.3	0.388	1
ATP5F1	Del_16q12.1	0.388	1
C10orf54	Del_4p16.3	0.388	1
CCK	Del_14q23.3	0.388	1
CCK	Del_16q12.1	0.388	1
CDK4	MPP7	0.388	1
CDK4	Amp_17q25.3	0.388	1
CDK4	Del_1p22.1	0.388	1
CPA3	Amp_8q24.21	0.388	1
DCLK3	6p-Amp	0.388	1
FAM58A	Del_14q23.3	0.388	1
FAM58A	Del_16q12.1	0.388	1
FGFR2	6p-Amp	0.388	1
GNAQ	Del_14q23.3	0.388	1
KRAS	Del_14q23.3	0.388	1
OXA1L	Del_1p22.1	0.388	1
PPP6C	Amp_8q24.21	0.388	1
PTPN11	Del_1p22.1	0.388	1
PTPN11	Del_4p16.3	0.388	1
PTPN22	16q-Del	0.388	1
S100A8	Del_1p22.1	0.388	1
SLC9A11	18p-Del	0.388	1
Amp_11q13.3	Del_14q23.3	0.388	1
ATP5F1	Del_10q21.1	0.389	1
CCK	Del_10q21.1	0.389	1
CPA3	6p-Amp	0.389	1
FAM58A	Del_10q21.1	0.389	1
KRAS	Del_10q21.1	0.389	1
PPP6C	SLC9A11	0.389	1
RELN	Amp_7p22.1	0.389	1
COL3A1	Amp_6q12	0.39	1
DDX3X	11q-Del	0.39	1
DSG3	Del_10q26.3	0.39	1
GML	Del_10q26.3	0.39	1
IDH1	NF1	0.39	1
KEL	7q-Amp	0.39	1
NUP214	Del_8p23.3	0.39	1
RELN	13q-Amp	0.39	1
RPTN	10p-Del	0.39	1
THSD7B	Del_16q12.1	0.39	1
Amp_4q12	Del_8p23.3	0.39	1
ALPK2	9q-Del	0.391	1
APC	Amp_13q31.3	0.391	1
C10orf28	Del_1p36.31	0.391	1
C10orf28	Del_4q34.3	0.391	1
EMG1	KEL	0.391	1
PTPN22	Amp_13q31.3	0.391	1
TRERF1	Amp_13q31.3	0.391	1
ALPK2	Del_15q21.1	0.392	1
ARID2	Del_4p16.3	0.392	1
C7orf58	Amp_17q25.3	0.392	1
CBL	RELN	0.392	1
CNTN5	20q-Amp	0.392	1
KRT73	Amp_7p22.1	0.392	1
NF1	Amp_22q13.2	0.392	1
THSD7B	7q-Amp	0.392	1
14q-Del	Amp_17q25.3	0.392	1
CCNA1	Amp_22q13.2	0.393	1
CDC42BPA	Amp_22q13.2	0.393	1
CTNNB1	KYNU	0.393	1
IDH1	7q-Amp	0.393	1
KIT	Amp_22q13.2	0.393	1
KRT73	Amp_20q13.33	0.393	1
KYNU	Amp_15q26.2	0.393	1
NUP214	7q-Amp	0.393	1
RIPK4	Amp_22q13.2	0.393	1
ALPK2	Del_5q31.3	0.394	1
BRAF	6q-Del	0.394	1
MLL	Del_10p15.3	0.394	1
PDGFRA	Del_10q21.1	0.394	1
PTPN22	Del_10q21.1	0.394	1
TRERF1	Del_10q21.1	0.394	1
1q-Amp	Del_Xp21.1	0.394	1
Amp_5p15.33	Del_10p15.3	0.394	1
HRAS	Amp_7q34	0.395	1
USP17L2	Del_10q23.31	0.395	1
C15orf23	9p-Del	0.396	1
C7orf58	20q-Amp	0.396	1
C7orf58	Amp_5p15.33	0.396	1
CBL	Del_12q23.3	0.396	1
DCLK3	6p-Del	0.396	1
EPHA4	20p-Amp	0.396	1
EPHA4	18p-Del	0.396	1
FGFR2	Amp_11q13.3	0.396	1
GUCY2F	9p-Del	0.396	1
IDH1	Del_11q23.3	0.396	1
MLL	14q-Del	0.396	1
NBPF1	Amp_11q13.3	0.396	1
RB1	Del_13q34	0.396	1
SYK	Del_10p15.3	0.396	1
ZFX	Del_11q23.3	0.396	1
20q-Amp	14q-Del	0.396	1
CDKN2A	KRAS	0.397	1
NAP1L2	Amp_22q13.2	0.397	1
PTPN11	Del_10q26.3	0.397	1
CCNA1	Amp_11q13.3	0.398	1
CDC42BPA	6p-Del	0.398	1
CDC42BPA	Amp_11q13.3	0.398	1
CTNNB1	USH2A	0.398	1
EPHA4	EZH2	0.398	1
EZH2	6p-Del	0.398	1
EZH2	Amp_11q13.3	0.398	1
KRT73	6p-Del	0.398	1
KRT73	Amp_11q13.3	0.398	1
KRTAP5-10	10p-Del	0.398	1
MPP7	Amp_8q24.21	0.398	1
RIPK4	Amp_11q13.3	0.398	1
SLC27A5	10p-Del	0.398	1
USH2A	Del_15q13.3	0.398	1
Amp_8q24.21	Del_1p22.1	0.398	1
GUCY2F	Amp_7q34	0.399	1
HSD11B1	Amp_12q14.1	0.399	1
HSD11B1	Del_16p13.3	0.399	1
STK19	Amp_12q14.1	0.399	1
XIRP2	Del_3q13.31	0.399	1
9p-Del	Amp_3p13	0.399	1
Amp_8q24.21	Del_1p36.31	0.399	1
BTK	Del_6q26	0.4	1
CDK4	KCND2	0.4	1
COL3A1	Del_Xp21.1	0.4	1
FRMPD4	Amp_3p13	0.4	1
HRAS	Amp_1q21.3	0.4	1
KCND2	NUDT11	0.4	1
KRTAP5-10	22q-Amp	0.4	1
MSTN	PTEN	0.4	1
MYO3B	Amp_3p13	0.4	1
NAP1L2	SLC27A5	0.4	1
PTEN	ZNF780B	0.4	1
STK19	20q-Amp	0.4	1
11q-Del	Del_Xp21.1	0.4	1
ANO4	Del_4p16.3	0.401	1
DSG3	Del_16p13.3	0.401	1
MAP2K1	5q-Del	0.401	1
SLC38A4	USP9X	0.401	1
TTN	17p-Del	0.401	1
USH2A	Amp_1q44	0.401	1
CTNNA3	Amp_1p12	0.402	1
ZFX	Amp_7q34	0.402	1
ATP5F1	Del_10p15.3	0.403	1
CCK	Del_10p15.3	0.403	1
DDX3X	Del_12q23.3	0.403	1
GNAQ	Del_10p15.3	0.403	1
KCND2	Del_5q31.3	0.403	1
LGR6	Del_13q34	0.403	1
PPP6C	Del_13q34	0.403	1
RAC1	Del_12q23.3	0.403	1
RAC1	Del_13q34	0.403	1
RPTN	5q-Del	0.403	1
SLC9A11	Amp_20q13.33	0.403	1
USH2A	Del_11q23.3	0.403	1
Amp_22q13.2	Del_9p21.3	0.403	1
BRAF	Del_16p13.3	0.404	1
CDKN2A	Amp_7p22.1	0.404	1
FLT1	Del_3q13.31	0.404	1
KCND2	9q-Del	0.404	1
KCND2	Amp_1q21.3	0.404	1
KEL	Del_3q13.31	0.404	1
THSD7B	Amp_17q25.3	0.404	1
Del_1p36.31	Del_3q13.31	0.404	1
COL3A1	10p-Del	0.405	1
DDX3X	7q-Amp	0.405	1
EMG1	Amp_7q34	0.405	1
FGFR2	Del_1p22.1	0.405	1
FGFR2	Del_4p16.3	0.405	1
GML	Amp_7q34	0.405	1
LGR6	7q-Amp	0.405	1
NBPF1	NRAS	0.405	1
NF1	Del_6q26	0.405	1
POTEG	Amp_17q25.3	0.405	1
RAC1	7q-Amp	0.405	1
TP53	Del_16q23.1	0.405	1
Amp_3p13	Del_9p23	0.405	1
ACSBG1	GUCY2F	0.406	1
ACSBG1	13q-Amp	0.406	1
APCS	C15orf23	0.406	1
C15orf23	IGF1R	0.406	1
CAMTA1	Amp_6p24.3	0.406	1
CPA3	Del_16q23.1	0.406	1
DMC1	TP63	0.406	1
DMC1	8q-Amp	0.406	1
GML	8q-Amp	0.406	1
IDH1	14q-Del	0.406	1
IDH1	Del_5q12.1	0.406	1
IGF1R	13q-Amp	0.406	1
MAN1A1	14q-Del	0.406	1
MAN1A1	Del_5q12.1	0.406	1
MAN1A1	Del_5q31.3	0.406	1
SLC9A11	Del_10q23.31	0.406	1
ZFX	Del_5q31.3	0.406	1
14q-Del	Amp_4q12	0.406	1
Amp_6q12	Del_16q23.1	0.406	1
ATP5F1	Amp_5p15.33	0.407	1
CCK	MLL	0.407	1
CCK	Amp_5p15.33	0.407	1
CDKN2A	Del_16q23.1	0.407	1
COL3A1	1q-Amp	0.407	1
FAM58A	20q-Amp	0.407	1
FAM58A	Amp_5p15.33	0.407	1
FRMPD4	Amp_1q44	0.407	1
GNAQ	20q-Amp	0.407	1
FGFR2	Del_16q23.1	0.408	1
MYO3B	Del_10q21.1	0.408	1
NBPF1	Del_16q23.1	0.408	1
SLC38A4	Del_10p15.3	0.408	1
XIRP2	Del_15q13.3	0.408	1
APCS	Del_6q21	0.409	1
BRAF	PPP6C	0.409	1
BRAF	RAC1	0.409	1
EPHA4	Del_11q23.3	0.409	1
FRMPD4	17p-Del	0.409	1
RELN	Amp_1q21.3	0.409	1
CBL	FGFR2	0.41	1
CBL	POTEG	0.41	1
CBL	20p-Amp	0.41	1
CBL	18p-Del	0.41	1
CBL	Del_2q37.3	0.41	1
EPHA7	8p-Amp	0.41	1
EPHA7	Del_5p15.31	0.41	1
FGFR2	RB1	0.41	1
FGFR2	RQCD1	0.41	1
MYO16	8p-Amp	0.41	1
NGF	18p-Del	0.41	1
OR6C74	18p-Del	0.41	1
POTEG	RB1	0.41	1
RQCD1	18p-Del	0.41	1
RQCD1	Del_2q37.3	0.41	1
USH2A	Del_16q12.1	0.41	1
Del_9p23	Del_Xp21.1	0.41	1
C15orf23	9q-Del	0.412	1
GUCY2F	Amp_1q21.3	0.412	1
KEL	Del_9p21.3	0.412	1
NF1	9p-Del	0.412	1
NRAS	RAC1	0.412	1
OR6C74	1q-Amp	0.412	1
PARM1	9q-Del	0.412	1
13q-Amp	9q-Del	0.412	1
BRAF	USP17L2	0.413	1
C10orf28	9q-Del	0.413	1
CDK4	CTNNA3	0.413	1
CDK4	Amp_3p13	0.413	1
CDKN2A	Del_16q24.3	0.413	1
CTNNB1	EPHA6	0.413	1
EPHA6	Amp_15q26.2	0.413	1
MYO16	5q-Del	0.413	1
OXA1L	Amp_3p13	0.413	1
PTPN11	Amp_3p13	0.413	1
S100A8	Amp_3p13	0.413	1
SELP	5q-Del	0.413	1
SLC38A4	5q-Del	0.413	1
ACSBG1	Del_14q23.3	0.414	1
C10orf28	16q-Del	0.414	1
DSG3	Del_19p13.3	0.414	1
NAP1L2	Amp_13q31.3	0.414	1
SLC9A11	1q-Amp	0.414	1
USP17L2	22q-Amp	0.414	1
22q-Amp	Amp_13q31.3	0.414	1
Amp_1q21.3	Amp_12q15	0.414	1
FRMPD4	Del_16q24.3	0.415	1
HSD11B1	Del_15q13.3	0.415	1
RB1	THSD7B	0.415	1
SLC38A4	6p-Amp	0.415	1
STK19	Amp_1p12	0.415	1
TP63	5q-Del	0.415	1
8q-Amp	5q-Del	0.415	1
ANO4	PTEN	0.416	1
ANO4	22q-Amp	0.416	1
EPHA6	Amp_7p22.1	0.416	1
FLT1	Del_1p22.1	0.416	1
KEL	Del_1p22.1	0.416	1
KRTAP5-10	Del_3q13.31	0.416	1
MPP7	Del_1p36.31	0.416	1
MPP7	Del_4q34.3	0.416	1
MSTN	Del_3q13.31	0.416	1
NAP1L2	16q-Del	0.416	1
SLC27A5	Del_19p13.3	0.416	1
22q-Amp	16q-Del	0.416	1
ALPK2	Amp_12q14.1	0.417	1
ATP5F1	Del_15q13.3	0.417	1
CCK	Del_15q13.3	0.417	1
CCNA1	Amp_6q12	0.417	1
CDC42BPA	Amp_6q12	0.417	1
CYP3A4	Amp_7p22.1	0.417	1
DDX3X	KIT	0.417	1
FAM58A	Amp_1p12	0.417	1
GUCY2F	Del_10q21.1	0.417	1
HSD11B1	Amp_1q44	0.417	1
KRT73	Amp_6q12	0.417	1
PARM1	Del_10q21.1	0.417	1
PPP6C	Amp_7p22.1	0.417	1
RIPK4	Amp_6q12	0.417	1
Amp_22q13.2	Del_16p13.3	0.417	1
APC	Amp_11q13.3	0.418	1
ATP5F1	NRAS	0.418	1
CDKN2A	Del_12q23.3	0.418	1
CDKN2A	Del_13q34	0.418	1
CTNNB1	ZFX	0.418	1
CTNNB1	Amp_4q12	0.418	1
EPHA4	Del_5p15.31	0.418	1
GNAQ	NRAS	0.418	1
KYNU	16q-Del	0.418	1
MAN1A1	MAP2K1	0.418	1
MAN1A1	Amp_15q26.2	0.418	1
NUP214	Amp_15q26.2	0.418	1
PDGFRA	6p-Del	0.418	1
TTN	6p-Amp	0.418	1
ZFX	Amp_15q26.2	0.418	1
8p-Amp	6p-Del	0.418	1
Amp_12q15	Amp_15q26.2	0.418	1
BRAF	TRERF1	0.419	1
KCND2	Del_5q12.1	0.419	1
OR4S2	Amp_17q25.3	0.419	1
OR4S2	Del_1p22.1	0.419	1
USP9X	Amp_17q25.3	0.419	1
CAMTA1	Del_9p21.3	0.42	1
PARM1	1q-Amp	0.42	1
22q-Amp	Del_9p21.3	0.42	1
ARID2	Amp_1p12	0.421	1
ARID2	Del_15q13.3	0.421	1
BRAF	Del_13q34	0.421	1
C10orf28	6q-Del	0.421	1
C7orf58	Amp_1p12	0.421	1
KIT	TTN	0.421	1
NF1	Del_15q21.1	0.421	1
RAC1	Del_5q31.3	0.421	1
RELN	Del_13q34	0.421	1
USH2A	Amp_17q25.3	0.421	1
Amp_3p13	Del_11q23.3	0.421	1
ARID2	Amp_22q13.2	0.422	1
CTNNB1	Del_10p15.3	0.422	1
FLT1	IDH1	0.422	1
IDH1	Del_1p36.31	0.422	1
IDH1	Del_4q34.3	0.422	1
MAP2K1	Del_10p15.3	0.422	1
NUP214	Del_1p36.31	0.422	1
USP17L2	Del_10q26.3	0.422	1
11p-Del	Amp_3p13	0.422	1
14q-Del	Amp_20q13.33	0.422	1
Amp_4q12	Del_1p36.31	0.422	1
Amp_22q13.2	Del_5q12.1	0.422	1
COL3A1	RQCD1	0.423	1
HRAS	Amp_7p22.1	0.423	1
KEL	Amp_5p15.33	0.423	1
NGF	11q-Del	0.423	1
8q-Amp	9q-Del	0.423	1
ANO4	Del_5q31.3	0.424	1
APC	NGF	0.424	1
CBL	PTPN22	0.424	1
CBL	8p-Amp	0.424	1
CPA3	18p-Del	0.424	1
CPA3	Del_16q12.1	0.424	1
CYP3A4	20p-Amp	0.424	1
CYP3A4	18p-Del	0.424	1
CYP3A4	Del_14q23.3	0.424	1
DCLK3	6q-Del	0.424	1
DDX3X	POTEG	0.424	1
DDX3X	18p-Del	0.424	1
EPHA4	Amp_5p15.33	0.424	1
FGFR2	Amp_6q12	0.424	1
LGR6	20p-Amp	0.424	1
LGR6	18p-Del	0.424	1
LGR6	Del_2q37.3	0.424	1
LGR6	Del_16q12.1	0.424	1
MLL	6p-Del	0.424	1
NBPF1	Amp_6q12	0.424	1
NGF	8p-Amp	0.424	1
OR6C74	Del_10q21.1	0.424	1
PDGFRA	RQCD1	0.424	1
PTPN22	RB1	0.424	1
RAC1	18p-Del	0.424	1
RAC1	Del_2q37.3	0.424	1
RB1	Del_5p15.31	0.424	1
RPTN	Amp_6q12	0.424	1
RQCD1	TRERF1	0.424	1
RQCD1	Del_5p15.31	0.424	1
17p-Del	Amp_11q13.3	0.424	1
18p-Del	Amp_6q12	0.424	1
CTNNA3	Del_8p23.3	0.425	1
CTNNA3	Del_12q23.3	0.425	1
EMG1	MYO16	0.425	1
PDGFRA	Del_10p15.3	0.425	1
PTPN22	Del_10p15.3	0.425	1
TTN	14q-Del	0.425	1
TTN	Del_5q12.1	0.425	1
5q-Del	Del_3q13.31	0.425	1
5q-Del	Del_19p13.3	0.425	1
Amp_3p13	Del_12q23.3	0.425	1
Amp_3p13	Del_13q34	0.425	1
BRAF	MPP7	0.426	1
CDK4	MYO3B	0.426	1
DMC1	6q-Del	0.426	1
FRMPD4	NUDT11	0.426	1
MYO3B	NUDT11	0.426	1
TPTE	18p-Del	0.426	1
ACSBG1	Amp_12q14.1	0.427	1
ACSBG1	Del_16p13.3	0.427	1
ANO4	Amp_1q21.3	0.427	1
APCS	Amp_12q14.1	0.427	1
ATP5F1	Del_15q21.1	0.427	1
C15orf23	6p-Amp	0.427	1
CCK	NF1	0.427	1
CCK	Del_15q21.1	0.427	1
FAM58A	Del_8p23.3	0.427	1
FAM58A	Del_15q21.1	0.427	1
IDH1	6q-Del	0.427	1
IGF1R	Del_16p13.3	0.427	1
KRAS	Del_8p23.3	0.427	1
PARM1	6p-Amp	0.427	1
SLC9A11	13q-Amp	0.427	1
ZNF780B	Amp_6p24.3	0.427	1
KCND2	20p-Amp	0.428	1
NAP1L2	Del_9p23	0.428	1
COL3A1	Del_10p15.3	0.429	1
DCLK3	Del_14q23.3	0.429	1
NBPF1	Del_14q23.3	0.429	1
RPTN	20p-Amp	0.429	1
RPTN	18p-Del	0.429	1
RPTN	Del_2q37.3	0.429	1
RPTN	Del_11q23.3	0.429	1
20p-Amp	Del_14q23.3	0.429	1
DSG3	Del_10q21.1	0.43	1
HSD11B1	Del_15q21.1	0.43	1
IGF1R	9p-Del	0.43	1
SYK	9p-Del	0.43	1
DMC1	TP53	0.431	1
DMC1	6p-Del	0.431	1
DMC1	Amp_11q13.3	0.431	1
DSG3	Del_11q23.3	0.431	1
GML	TP53	0.431	1
MYO3B	Amp_1p12	0.431	1
STK19	11q-Del	0.431	1
22q-Amp	Del_5q31.3	0.431	1
C15orf23	Del_12q23.3	0.432	1
CCNA1	6p-Amp	0.432	1
EZH2	6p-Amp	0.432	1
KRT73	6p-Amp	0.432	1
MPP7	8p-Amp	0.432	1
PDGFRA	Amp_17q25.3	0.432	1
PTPN22	Amp_17q25.3	0.432	1
PTPN22	Del_1p22.1	0.432	1
TRERF1	Amp_17q25.3	0.432	1
TRERF1	Del_1p22.1	0.432	1
8p-Amp	Del_1p22.1	0.432	1
8p-Amp	Del_4p16.3	0.432	1
Amp_1q21.3	Del_16q12.1	0.432	1
Amp_22q13.2	Del_19p13.3	0.432	1
ANO4	Del_16p13.3	0.433	1
ATP5F1	10p-Del	0.433	1
CBL	7q-Amp	0.433	1
CCK	10p-Del	0.433	1
GNAQ	10p-Del	0.433	1
USH2A	5q-Del	0.433	1
DSG3	Del_14q23.3	0.434	1
RPTN	11p-Del	0.434	1
SLC9A11	10q-Del	0.434	1
TP53	Del_16q12.1	0.434	1
USP17L2	Del_10q21.1	0.434	1
GUCY2F	11q-Del	0.435	1
C15orf23	KIT	0.436	1
CCNA1	13q-Amp	0.436	1
CDC42BPA	13q-Amp	0.436	1
CTNNB1	MYO16	0.436	1
EPHA7	Amp_15q26.2	0.436	1
KRT73	13q-Amp	0.436	1
MAP2K1	SLC38A4	0.436	1
MYO16	Amp_15q26.2	0.436	1
BRAF	DSG3	0.437	1
C10orf28	Del_1p22.1	0.437	1
EMG1	Amp_17q25.3	0.437	1
MPP7	Amp_1q44	0.437	1
MSTN	Amp_1q44	0.437	1
POTEG	10p-Del	0.437	1
PTPN22	Amp_7q34	0.437	1
SLC9A11	Amp_1p12	0.437	1
TRERF1	Amp_7q34	0.437	1
Amp_1q21.3	Del_8p23.3	0.437	1
Amp_1q44	Del_1p22.1	0.437	1
ATP5F1	14q-Del	0.438	1
ATP5F1	Del_5q12.1	0.438	1
C7orf58	KRAS	0.438	1
CCK	14q-Del	0.438	1
DSG3	11p-Del	0.438	1
FAM58A	14q-Del	0.438	1
GNAQ	14q-Del	0.438	1
IDH1	5q-Del	0.438	1
KRAS	14q-Del	0.438	1
KRAS	Del_5q12.1	0.438	1
MAN1A1	5q-Del	0.438	1
NUP214	5q-Del	0.438	1
SLC9A11	11q-Del	0.438	1
ZFX	5q-Del	0.438	1
BTK	Amp_8q24.21	0.439	1
C10orf54	Del_12q23.3	0.439	1
CAMTA1	CBL	0.439	1
CBL	PTEN	0.439	1
CBL	22q-Amp	0.439	1
CDK4	Del_13q34	0.439	1
EPHA7	PTEN	0.439	1
EPHA7	22q-Amp	0.439	1
IGF1R	10p-Del	0.439	1
LGR6	10p-Del	0.439	1
NAP1L2	RQCD1	0.439	1
PTEN	SELP	0.439	1
PTPN11	Del_12q23.3	0.439	1
PTPN11	Del_13q34	0.439	1
RB1	22q-Amp	0.439	1
RELN	Del_10p15.3	0.439	1
S100A8	Del_12q23.3	0.439	1
SYK	10p-Del	0.439	1
TTN	11q-Del	0.439	1
ZFX	Amp_8q24.21	0.439	1
10p-Del	Amp_6q12	0.439	1
ANO4	8q-Amp	0.44	1
ANO4	Del_16q24.3	0.44	1
CAMTA1	Amp_11q13.3	0.44	1
EPHA6	1q-Amp	0.44	1
NAP1L2	6p-Del	0.44	1
NAP1L2	Amp_11q13.3	0.44	1
PARM1	Amp_8q24.21	0.44	1
5q-Del	Amp_17q25.3	0.44	1
6p-Del	Amp_1q44	0.44	1
APC	Del_16q23.1	0.441	1
APCS	Del_10q23.31	0.441	1
CYP3A5	Del_10q23.31	0.441	1
FGFR2	Amp_8q24.21	0.441	1
MYO3B	Del_10p15.3	0.441	1
8p-Amp	Del_16q23.1	0.441	1
ACSBG1	20q-Amp	0.442	1
ACSBG1	Amp_5p15.33	0.442	1
APCS	17p-Del	0.442	1
BTK	Amp_4q12	0.442	1
BTK	Amp_12q15	0.442	1
C10orf54	TPTE	0.442	1
CDKN2A	Amp_6q12	0.442	1
CYP3A5	20q-Amp	0.442	1
CYP3A5	Amp_5p15.33	0.442	1
IDH1	MAN1A1	0.442	1
IDH1	NUP214	0.442	1
IGF1R	17p-Del	0.442	1
MAN1A1	ZFX	0.442	1
MAN1A1	Amp_4q12	0.442	1
MAN1A1	Amp_12q15	0.442	1
OR6C74	Del_10p15.3	0.442	1
S100A8	7p-Amp	0.442	1
SYK	20q-Amp	0.442	1
SYK	Amp_5p15.33	0.442	1
ZFX	Amp_4q12	0.442	1
ZFX	Amp_12q15	0.442	1
CTNNB1	HSD11B1	0.443	1
EPHA6	6p-Del	0.443	1
FRMPD4	Amp_12q14.1	0.443	1
FRMPD4	Del_16p13.3	0.443	1
MLL	8q-Amp	0.443	1
OR4S2	11p-Del	0.443	1
PTPN22	10q-Del	0.443	1
STK19	Amp_15q26.2	0.443	1
THSD7B	Del_12q23.3	0.443	1
TP63	Amp_5p15.33	0.443	1
TPTE	Amp_7q34	0.443	1
TRERF1	10q-Del	0.443	1
USP9X	11p-Del	0.443	1
CTNNA3	Amp_22q13.2	0.444	1
EPHA6	Del_Xp21.1	0.444	1
GUCY2F	Del_16q23.1	0.444	1
NGF	Del_5q31.3	0.444	1
OR6C74	Del_5q31.3	0.444	1
RB1	Del_5q31.3	0.444	1
TP63	Del_6q21	0.444	1
SLC9A11	Amp_17q25.3	0.445	1
TRERF1	Del_6q21	0.445	1
USP9X	Del_6q26	0.445	1
6p-Amp	Del_4p16.3	0.445	1
Amp_7q34	Amp_13q31.3	0.445	1
APC	CPA3	0.446	1
APC	DDX3X	0.446	1
BRAF	Amp_8q24.21	0.446	1
CDC42BPA	Del_16q23.1	0.446	1
CPA3	8p-Amp	0.446	1
CPA3	Del_5p15.31	0.446	1
CYP3A4	PDGFRA	0.446	1
DDX3X	Del_5p15.31	0.446	1
HSD11B1	14q-Del	0.446	1
KRT73	Del_16q23.1	0.446	1
LGR6	Del_5p15.31	0.446	1
PTPN22	Amp_6q12	0.446	1
RIPK4	Del_16q23.1	0.446	1
THSD7B	Amp_6p24.3	0.446	1
Amp_6q12	Del_5p15.31	0.446	1
ARID2	Del_8p23.3	0.447	1
ARID2	Del_15q21.1	0.447	1
C10orf28	Amp_7p22.1	0.447	1
C7orf58	Del_8p23.3	0.447	1
CDK4	10q-Del	0.447	1
NRAS	Amp_15q26.2	0.447	1
PTPN11	10q-Del	0.447	1
USP9X	10q-Del	0.447	1
ARID2	Amp_13q31.3	0.448	1
ATP5F1	Del_4q34.3	0.448	1
CCK	Del_1p36.31	0.448	1
CCK	Del_4q34.3	0.448	1
CCNA1	Del_9p21.3	0.448	1
CCNA1	Del_10q21.1	0.448	1
CDC42BPA	Del_10q21.1	0.448	1
CTNNA3	Del_5q12.1	0.448	1
EZH2	Del_9p21.3	0.448	1
FAM58A	Del_1p36.31	0.448	1
FLT1	KRAS	0.448	1
GML	10q-Del	0.448	1
KIT	USH2A	0.448	1
KIT	Del_10q21.1	0.448	1
KRT73	Del_9p21.3	0.448	1
MSTN	Amp_13q31.3	0.448	1
PTEN	USH2A	0.448	1
RIPK4	Del_9p21.3	0.448	1
SLC27A5	USP17L2	0.448	1
TP53	Amp_7p22.1	0.448	1
ZNF780B	Amp_13q31.3	0.448	1
14q-Del	Amp_3p13	0.448	1
Amp_1q21.3	Amp_3p13	0.448	1
CPA3	GML	0.449	1
DMC1	RAC1	0.449	1
FLT1	Amp_1p12	0.449	1
FLT1	Del_15q13.3	0.449	1
GML	PPP6C	0.449	1
KEL	Amp_1p12	0.449	1
Amp_1p12	Del_1p36.31	0.449	1
Amp_1p12	Del_4q34.3	0.449	1
FRMPD4	Del_13q34	0.45	1
SLC9A11	10p-Del	0.45	1
TP63	Del_13q34	0.45	1
MLL	Del_5q31.3	0.451	1
20q-Amp	Del_5q31.3	0.451	1
ALPK2	Del_1p36.31	0.452	1
ALPK2	Del_4q34.3	0.452	1
BRAF	Del_6q21	0.452	1
CTNNA3	Del_2q37.3	0.452	1
DCLK3	Amp_3p13	0.452	1
FGFR2	Amp_3p13	0.452	1
KEL	Amp_20q13.33	0.452	1
MSTN	9p-Del	0.452	1
RELN	Del_1p22.1	0.452	1
RPTN	Amp_6p24.3	0.452	1
TTN	16q-Del	0.452	1
TTN	Amp_15q26.2	0.452	1
ZNF780B	9p-Del	0.452	1
C10orf54	POTEG	0.453	1
C10orf54	20p-Amp	0.453	1
C10orf54	18p-Del	0.453	1
C10orf54	Del_2q37.3	0.453	1
C15orf23	20p-Amp	0.453	1
C15orf23	18p-Del	0.453	1
CDK4	DCLK3	0.453	1
CDK4	20p-Amp	0.453	1
CDK4	Del_2q37.3	0.453	1
CNTN5	HRAS	0.453	1
DCLK3	NUDT11	0.453	1
EPHA6	Amp_1q21.3	0.453	1
FGFR2	NUDT11	0.453	1
NBPF1	NUDT11	0.453	1
NUDT11	POTEG	0.453	1
NUDT11	20p-Amp	0.453	1
NUDT11	18p-Del	0.453	1
OXA1L	20p-Amp	0.453	1
OXA1L	18p-Del	0.453	1
PARM1	20p-Amp	0.453	1
PARM1	18p-Del	0.453	1
PARM1	Del_2q37.3	0.453	1
POTEG	13q-Amp	0.453	1
PTPN11	20p-Amp	0.453	1
PTPN11	18p-Del	0.453	1
APC	Amp_1q21.3	0.454	1
CBL	Del_19p13.3	0.454	1
CTNNB1	Amp_17q25.3	0.454	1
CTNNB1	Del_1p22.1	0.454	1
CTNNB1	Del_4p16.3	0.454	1
KYNU	Del_4p16.3	0.454	1
MAP2K1	MPP7	0.454	1
MAP2K1	Del_1p22.1	0.454	1
NGF	Del_3q13.31	0.454	1
NGF	Del_19p13.3	0.454	1
OR6C74	Del_3q13.31	0.454	1
PDGFRA	9q-Del	0.454	1
RB1	Del_3q13.31	0.454	1
RQCD1	Del_3q13.31	0.454	1
USP17L2	8q-Amp	0.454	1
BTK	16q-Del	0.455	1
CAMTA1	6p-Amp	0.455	1
CNTN5	Amp_20q13.33	0.455	1
CNTN5	Amp_22q13.2	0.455	1
NAP1L2	6p-Amp	0.455	1
NUP214	16q-Del	0.455	1
ZFX	16q-Del	0.455	1
7q-Amp	Del_3q13.31	0.455	1
ANO4	GML	0.456	1
CCNA1	Amp_12q14.1	0.456	1
CDC42BPA	Amp_12q14.1	0.456	1
CDC42BPA	Del_16p13.3	0.456	1
CDKN2A	16q-Del	0.456	1
EZH2	Amp_12q14.1	0.456	1
EZH2	Del_16p13.3	0.456	1
KRT73	Amp_12q14.1	0.456	1
NRAS	PTPN22	0.456	1
RIPK4	Amp_12q14.1	0.456	1
RIPK4	Del_16p13.3	0.456	1
USH2A	Del_5q31.3	0.456	1
ACSBG1	Amp_1p12	0.457	1
ATP5F1	Amp_6p24.3	0.457	1
FAM58A	Amp_6p24.3	0.457	1
IGF1R	Amp_1p12	0.457	1
SYK	Del_15q13.3	0.457	1
THSD7B	Del_16q24.3	0.457	1
TTN	10p-Del	0.457	1
ANO4	Amp_1q44	0.458	1
ARID2	Amp_7q34	0.458	1
DMC1	XIRP2	0.458	1
DMC1	Amp_7p22.1	0.458	1
KYNU	8q-Amp	0.458	1
MAP2K1	Del_16q24.3	0.458	1
XIRP2	8p-Amp	0.458	1
ATP5F1	5q-Del	0.459	1
FAM58A	5q-Del	0.459	1
Amp_20q13.33	Del_14q23.3	0.459	1
CPA3	20q-Amp	0.46	1
DDX3X	17p-Del	0.46	1
EZH2	Del_14q23.3	0.46	1
KIT	Del_14q23.3	0.46	1
KRT73	Del_14q23.3	0.46	1
KRT73	Del_16q12.1	0.46	1
MLL	Del_14q23.3	0.46	1
PPP6C	17p-Del	0.46	1
PPP6C	Amp_5p15.33	0.46	1
RAC1	Amp_5p15.33	0.46	1
USP9X	Amp_1q44	0.46	1
10p-Del	Amp_3p13	0.46	1
ACSBG1	Del_9p23	0.461	1
C15orf23	Del_14q23.3	0.461	1
C7orf58	Del_6q26	0.461	1
CAMTA1	Del_4p16.3	0.461	1
CDK4	RELN	0.461	1
EPHA6	Amp_4q12	0.461	1
IGF1R	Del_9p23	0.461	1
KRTAP5-10	Del_10q23.31	0.461	1
KRTAP5-10	Del_16q24.3	0.461	1
MSTN	Del_16q24.3	0.461	1
NAP1L2	Del_1p22.1	0.461	1
NAP1L2	Del_4p16.3	0.461	1
NUDT11	RELN	0.461	1
PARM1	Del_14q23.3	0.461	1
ZNF780B	8q-Amp	0.461	1
22q-Amp	Amp_17q25.3	0.461	1
22q-Amp	Del_1p22.1	0.461	1
Amp_22q13.2	Del_6q21	0.461	1
APC	Del_16q12.1	0.462	1
C10orf28	Amp_3p13	0.462	1
CYP3A5	Del_10q26.3	0.462	1
EMG1	Amp_3p13	0.462	1
HSD11B1	Del_1p36.31	0.462	1
RPTN	8p-Amp	0.462	1
8p-Amp	Del_16q12.1	0.462	1
Del_13q34	Del_15q13.3	0.462	1
THSD7B	16q-Del	0.463	1
USH2A	Amp_1q21.3	0.463	1
ATP5F1	Amp_1q44	0.464	1
BTK	Amp_7p22.1	0.464	1
EPHA4	Del_19p13.3	0.464	1
RELN	Amp_8q24.21	0.464	1
USH2A	1q-Amp	0.464	1
ZFX	Amp_7p22.1	0.464	1
Amp_22q13.2	Del_6q26	0.464	1
CCK	Del_9p23	0.465	1
CNTN5	Del_8p23.3	0.465	1
DSG3	Amp_22q13.2	0.465	1
EMG1	Del_6q21	0.465	1
HSD11B1	Amp_7q34	0.465	1
STK19	Amp_7q34	0.465	1
USH2A	Del_9p23	0.465	1
16q-Del	Amp_17q25.3	0.465	1
5q-Del	Amp_1q44	0.465	1
BTK	Del_10q21.1	0.466	1
C15orf23	Del_5q31.3	0.466	1
CTNNA3	6q-Del	0.466	1
GUCY2F	Del_5q31.3	0.466	1
KRTAP5-10	Amp_11q13.3	0.466	1
MSTN	Amp_11q13.3	0.466	1
SLC27A5	Amp_11q13.3	0.466	1
SLC9A11	Amp_12q14.1	0.466	1
SLC9A11	Del_16p13.3	0.466	1
USH2A	Amp_4q12	0.466	1
ZNF780B	6p-Del	0.466	1
Amp_12q15	Del_10q21.1	0.466	1
APC	CDK4	0.467	1
BTK	Del_6q21	0.467	1
C10orf54	PTPN22	0.467	1
C10orf54	8p-Amp	0.467	1
CDK4	PTPN22	0.467	1
CDK4	TRERF1	0.467	1
HSD11B1	IDH1	0.467	1
HSD11B1	Amp_4q12	0.467	1
HSD11B1	Amp_12q15	0.467	1
NUDT11	TRERF1	0.467	1
NUDT11	8p-Amp	0.467	1
OXA1L	Del_5p15.31	0.467	1
PTPN11	PTPN22	0.467	1
PTPN11	Del_5p15.31	0.467	1
S100A8	8p-Amp	0.467	1
S100A8	Del_5p15.31	0.467	1
SELP	Amp_7q34	0.467	1
SLC38A4	Amp_7q34	0.467	1
TP63	Del_Xp21.1	0.467	1
8q-Amp	Del_Xp21.1	0.467	1
9p-Del	Amp_12q14.1	0.467	1
ALPK2	10p-Del	0.468	1
C15orf23	GML	0.468	1
CPA3	22q-Amp	0.468	1
DDX3X	NAP1L2	0.468	1
DMC1	GUCY2F	0.468	1
DMC1	PARM1	0.468	1
EPHA7	Del_3q13.31	0.468	1
KEL	Amp_13q31.3	0.468	1
LGR6	PTEN	0.468	1
LGR6	22q-Amp	0.468	1
PPP6C	PTEN	0.468	1
PTEN	RAC1	0.468	1
SELP	Del_3q13.31	0.468	1
SELP	Del_19p13.3	0.468	1
USP17L2	Del_4q34.3	0.468	1
GLI1	Del_10p15.3	0.469	1
KRT73	Del_10p15.3	0.469	1
PARM1	Amp_7p22.1	0.469	1
TPTE	Del_5p15.31	0.469	1
ACSBG1	CTNNB1	0.47	1
ACSBG1	Amp_15q26.2	0.47	1
APCS	MAP2K1	0.47	1
ATP5F1	16q-Del	0.47	1
CCK	16q-Del	0.47	1
CTNNB1	CYP3A5	0.47	1
FAM58A	16q-Del	0.47	1
IGF1R	Amp_15q26.2	0.47	1
MAP2K1	SYK	0.47	1
TPTE	Del_9p21.3	0.47	1
NBPF1	Amp_5p15.33	0.471	1
OR4S2	Del_11q23.3	0.471	1
POTEG	20q-Amp	0.471	1
POTEG	Amp_5p15.33	0.471	1
TRERF1	6q-Del	0.471	1
17p-Del	Del_2q37.3	0.471	1
ACSBG1	Del_8p23.3	0.472	1
ALPK2	Del_10q21.1	0.472	1
APCS	Del_15q21.1	0.472	1
CTNNB1	10p-Del	0.472	1
HRAS	7p-Amp	0.472	1
IGF1R	Del_8p23.3	0.472	1
KCND2	MAP2K1	0.472	1
KYNU	10p-Del	0.472	1
SYK	Del_15q21.1	0.472	1
USH2A	Amp_20q13.33	0.472	1
CYP3A5	Amp_6p24.3	0.473	1
EPHA7	Amp_4q12	0.473	1
IDH1	SELP	0.473	1
LGR6	Del_11q23.3	0.473	1
PPP6C	Del_11q23.3	0.473	1
SELP	Amp_4q12	0.473	1
SLC38A4	Amp_12q15	0.473	1
TP53	Amp_7q34	0.473	1
APC	Del_11q23.3	0.474	1
C10orf28	FRMPD4	0.474	1
EMG1	FRMPD4	0.474	1
EMG1	MYO3B	0.474	1
RELN	Amp_13q31.3	0.474	1
APC	13q-Amp	0.475	1
CAMTA1	Del_16q23.1	0.475	1
CDKN2A	Del_11q23.3	0.475	1
GUCY2F	Del_9p21.3	0.475	1
MYO3B	NRAS	0.475	1
PARM1	Del_5p15.31	0.475	1
PTPN22	13q-Amp	0.475	1
RELN	Del_11q23.3	0.475	1
TRERF1	13q-Amp	0.475	1
MYO3B	Amp_7q34	0.476	1
RPTN	Amp_8q24.21	0.476	1
USP17L2	6q-Del	0.476	1
COL3A1	Del_13q34	0.477	1
FRMPD4	Amp_22q13.2	0.477	1
HSD11B1	9q-Del	0.477	1
MYO3B	Del_5q12.1	0.477	1
HSD11B1	5q-Del	0.478	1
KRTAP5-10	Amp_7q34	0.478	1
MSTN	Amp_7q34	0.478	1
SLC27A5	Amp_7q34	0.478	1
SLC9A11	Del_6q21	0.478	1
CYP3A4	Amp_1p12	0.479	1
CYP3A4	Del_15q13.3	0.479	1
LGR6	Amp_1p12	0.479	1
PPP6C	Del_15q13.3	0.479	1
THSD7B	20q-Amp	0.479	1
Amp_1p12	Amp_6q12	0.479	1
APC	Amp_3p13	0.48	1
C10orf28	9p-Del	0.48	1
COL3A1	NRAS	0.48	1
CTNNA3	Del_5p15.31	0.48	1
MYO16	8q-Amp	0.48	1
OR6C74	10p-Del	0.48	1
PDGFRA	Amp_3p13	0.48	1
SELP	8q-Amp	0.48	1
SLC27A5	Del_10q26.3	0.48	1
ZNF780B	Del_10q26.3	0.48	1
DDX3X	Amp_6p24.3	0.481	1
EPHA7	KRAS	0.481	1
FAM58A	SELP	0.481	1
GNAQ	SELP	0.481	1
KRAS	SELP	0.481	1
NUDT11	1q-Amp	0.481	1
PPP6C	Amp_6p24.3	0.481	1
PTPN11	1q-Amp	0.481	1
RAC1	Amp_6p24.3	0.481	1
USH2A	Amp_12q14.1	0.481	1
C10orf54	CAMTA1	0.482	1
C10orf54	22q-Amp	0.482	1
C7orf58	6p-Del	0.482	1
C7orf58	Amp_11q13.3	0.482	1
CAMTA1	NUDT11	0.482	1
CDK4	NAP1L2	0.482	1
COL3A1	Amp_6p24.3	0.482	1
FLT1	Del_6q21	0.482	1
GML	6p-Amp	0.482	1
KEL	Del_6q21	0.482	1
NAP1L2	NUDT11	0.482	1
NGF	Del_6q26	0.482	1
NUDT11	PTEN	0.482	1
OR6C74	Del_6q26	0.482	1
OXA1L	22q-Amp	0.482	1
PTEN	PTPN11	0.482	1
PTEN	S100A8	0.482	1
PTPN11	22q-Amp	0.482	1
RQCD1	Del_6q26	0.482	1
Amp_7p22.1	Del_16q23.1	0.482	1
ARID2	Del_10q23.31	0.483	1
CDKN2A	TRERF1	0.483	1
DSG3	Del_Xp21.1	0.483	1
KCND2	Amp_1q44	0.483	1
TP53	Del_Xp21.1	0.483	1
TTN	Del_14q23.3	0.483	1
ALPK2	5q-Del	0.484	1
CDC42BPA	7p-Amp	0.484	1
CPA3	SLC27A5	0.484	1
CYP3A4	SLC27A5	0.484	1
DCLK3	Amp_12q14.1	0.484	1
DCLK3	Del_16p13.3	0.484	1
DDX3X	SLC27A5	0.484	1
KRT73	7p-Amp	0.484	1
NBPF1	Amp_12q14.1	0.484	1
NBPF1	Del_16p13.3	0.484	1
POTEG	Amp_12q14.1	0.484	1
RAC1	SLC27A5	0.484	1
RAC1	ZNF780B	0.484	1
RIPK4	7p-Amp	0.484	1
SLC27A5	Amp_6q12	0.484	1
20p-Amp	Del_16p13.3	0.484	1
18p-Del	Amp_12q14.1	0.484	1
Amp_3p13	Amp_8q24.21	0.484	1
APCS	Amp_1q44	0.485	1
IGF1R	Amp_1q44	0.485	1
NF1	Del_12q23.3	0.485	1
NF1	Del_13q34	0.485	1
ANO4	Del_16q12.1	0.486	1
APCS	COL3A1	0.486	1
APCS	11q-Del	0.486	1
GUCY2F	Del_6q26	0.486	1
KRTAP5-10	11p-Del	0.486	1
MSTN	11p-Del	0.486	1
SLC27A5	11p-Del	0.486	1
1q-Amp	14q-Del	0.486	1
1q-Amp	Del_5q12.1	0.486	1
ARID2	10q-Del	0.487	1
C10orf28	Del_12q23.3	0.487	1
CBL	Amp_13q31.3	0.487	1
EMG1	Del_12q23.3	0.487	1
EMG1	Del_13q34	0.487	1
FGFR2	8q-Amp	0.487	1
FGFR2	Del_16q24.3	0.487	1
POTEG	Del_16q24.3	0.487	1
PTEN	Amp_7q34	0.487	1
RB1	USP17L2	0.487	1
RQCD1	Amp_13q31.3	0.487	1
TP63	18p-Del	0.487	1
TPTE	Del_10p15.3	0.487	1
ACSBG1	14q-Del	0.488	1
ACSBG1	Del_5q12.1	0.488	1
APCS	Del_5q12.1	0.488	1
ARID2	SYK	0.488	1
C10orf28	Del_10q23.31	0.488	1
CCNA1	MLL	0.488	1
CCNA1	20q-Amp	0.488	1
CCNA1	17p-Del	0.488	1
CDC42BPA	20q-Amp	0.488	1
CDC42BPA	Amp_5p15.33	0.488	1
DMC1	Amp_12q14.1	0.488	1
DMC1	Del_16p13.3	0.488	1
EMG1	Del_10q23.31	0.488	1
GML	Amp_12q14.1	0.488	1
GML	Del_16p13.3	0.488	1
KIT	MLL	0.488	1
KIT	17p-Del	0.488	1
KRT73	20q-Amp	0.488	1
KRT73	Amp_5p15.33	0.488	1
MSTN	9q-Del	0.488	1
SLC27A5	Amp_1q21.3	0.488	1
SLC9A11	Del_9p21.3	0.488	1
TP53	Amp_15q26.2	0.488	1
TRERF1	Amp_8q24.21	0.488	1
ZNF780B	9q-Del	0.488	1
CDKN2A	Amp_22q13.2	0.489	1
PDGFRA	10p-Del	0.489	1
STK19	6q-Del	0.489	1
ZFX	Del_9p23	0.489	1
Amp_4q12	Del_9p23	0.489	1
ARID2	Del_10q21.1	0.49	1
BTK	9p-Del	0.49	1
BTK	Amp_17q25.3	0.49	1
BTK	Del_4p16.3	0.49	1
IDH1	Amp_17q25.3	0.49	1
MAN1A1	9p-Del	0.49	1
MAN1A1	Del_10p15.3	0.49	1
MPP7	Amp_4q12	0.49	1
NUP214	Del_4p16.3	0.49	1
PTPN22	Del_10q23.31	0.49	1
SLC9A11	Del_3q13.31	0.49	1
SLC9A11	Del_6q26	0.49	1
SLC9A11	Del_19p13.3	0.49	1
TP53	Amp_13q31.3	0.49	1
USP17L2	11p-Del	0.49	1
ZFX	Del_4p16.3	0.49	1
C10orf54	11q-Del	0.491	1
CCNA1	NRAS	0.491	1
COL3A1	Del_6q26	0.491	1
CTNNA3	KYNU	0.491	1
CTNNA3	MAP2K1	0.491	1
EPHA7	Amp_17q25.3	0.491	1
KCND2	Del_9p23	0.491	1
MAP2K1	Amp_3p13	0.491	1
NRAS	RIPK4	0.491	1
NUDT11	11q-Del	0.491	1
OXA1L	11q-Del	0.491	1
SLC38A4	Del_4p16.3	0.491	1
Amp_17q25.3	Del_3q13.31	0.491	1
Amp_17q25.3	Del_19p13.3	0.491	1
CNTN5	EMG1	0.492	1
CPA3	Del_3q13.31	0.492	1
CYP3A4	Del_3q13.31	0.492	1
DDX3X	Del_19p13.3	0.492	1
HSD11B1	STK19	0.492	1
MPP7	1q-Amp	0.492	1
NRAS	USP17L2	0.492	1
PPP6C	Del_19p13.3	0.492	1
RELN	11q-Del	0.492	1
TP53	16q-Del	0.492	1
XIRP2	7q-Amp	0.492	1
Amp_6q12	Del_19p13.3	0.492	1
ATP5F1	Del_1p22.1	0.493	1
ATP5F1	Del_4p16.3	0.493	1
CCK	Amp_17q25.3	0.493	1
CCK	Del_1p22.1	0.493	1
CCK	Del_4p16.3	0.493	1
FAM58A	Del_1p22.1	0.493	1
FAM58A	Del_4p16.3	0.493	1
FGFR2	Amp_1p12	0.493	1
GNAQ	Amp_17q25.3	0.493	1
GNAQ	Del_1p22.1	0.493	1
KCND2	16q-Del	0.493	1
KRAS	MPP7	0.493	1
KRAS	Del_1p22.1	0.493	1
MLL	11p-Del	0.493	1
TP53	Amp_5p15.33	0.493	1
ACSBG1	Amp_4q12	0.494	1
ACSBG1	Amp_12q15	0.494	1
APCS	Amp_4q12	0.494	1
APCS	Amp_12q15	0.494	1
CYP3A5	IDH1	0.494	1
EPHA4	Del_16q24.3	0.494	1
FRMPD4	9q-Del	0.494	1
IDH1	SYK	0.494	1
MYO3B	Amp_1q21.3	0.494	1
TPTE	Del_15q13.3	0.494	1
HSD11B1	16q-Del	0.495	1
TP53	7p-Amp	0.495	1
TP53	7q-Amp	0.495	1
TTN	Del_19p13.3	0.495	1
CAMTA1	Del_14q23.3	0.496	1
CCK	Amp_7q34	0.496	1
CPA3	Amp_1q44	0.496	1
EPHA7	7q-Amp	0.496	1
LGR6	Amp_1q44	0.496	1
MYO16	7q-Amp	0.496	1
OR4S2	Del_13q34	0.496	1
PTEN	RPTN	0.496	1
SLC38A4	7q-Amp	0.496	1
C10orf54	Del_19p13.3	0.497	1
C15orf23	CAMTA1	0.497	1
C15orf23	PTEN	0.497	1
C15orf23	20q-Amp	0.497	1
CDKN2A	Del_6q21	0.497	1
GUCY2F	PTEN	0.497	1
GUCY2F	17p-Del	0.497	1
KRT73	Del_6q21	0.497	1
NAP1L2	13q-Amp	0.497	1
NUDT11	Del_19p13.3	0.497	1
OXA1L	Del_3q13.31	0.497	1
OXA1L	Del_19p13.3	0.497	1
PTPN11	Del_3q13.31	0.497	1
PTPN11	Del_19p13.3	0.497	1
S100A8	Del_3q13.31	0.497	1
S100A8	Del_19p13.3	0.497	1
TTN	Del_5q31.3	0.497	1
13q-Amp	22q-Amp	0.497	1
7q-Amp	Del_12q23.3	0.497	1
CYP3A4	Del_15q21.1	0.498	1
DDX3X	Del_15q21.1	0.498	1
HRAS	1q-Amp	0.498	1
LGR6	Del_8p23.3	0.498	1
PPP6C	Del_8p23.3	0.498	1
PPP6C	Del_15q21.1	0.498	1
RAC1	Del_15q21.1	0.498	1
ACSBG1	7q-Amp	0.499	1
ANO4	Del_Xp21.1	0.499	1
C15orf23	10p-Del	0.499	1
C7orf58	6q-Del	0.499	1
CCNA1	Amp_15q26.2	0.499	1
CDC42BPA	MAP2K1	0.499	1
CDC42BPA	Amp_15q26.2	0.499	1
EZH2	KYNU	0.499	1
KRT73	MAP2K1	0.499	1
PARM1	10p-Del	0.499	1
POTEG	1q-Amp	0.499	1
SLC9A11	Del_16q24.3	0.499	1
USH2A	20q-Amp	0.499	1
Amp_5p15.33	Del_10q21.1	0.499	1
APCS	BRAF	0.5	1
ARID2	BRAF	0.5	1
BRAF	C10orf28	0.5	1
BRAF	C15orf23	0.5	1
BRAF	GUCY2F	0.5	1
BRAF	HRAS	0.5	1
BRAF	KCND2	0.5	1
BRAF	NGF	0.5	1
BRAF	NUP214	0.5	1
BRAF	SELP	0.5	1
BRAF	SLC38A4	0.5	1
BRAF	USP9X	0.5	1
BRAF	Amp_22q13.2	0.5	1
KCND2	Del_16q23.1	0.5	1
MLL	Del_9p23	0.5	1
USH2A	6q-Del	0.5	1
Amp_5p15.33	Del_9p23	0.5	1
ALPK2	11q-Del	0.501	1
ARID2	Del_1p36.31	0.501	1
ARID2	Del_4q34.3	0.501	1
BTK	Del_10q23.31	0.501	1
C10orf28	18p-Del	0.501	1
C10orf28	Del_2q37.3	0.501	1
C7orf58	Del_1p36.31	0.501	1
EMG1	NBPF1	0.501	1
EMG1	18p-Del	0.501	1
EMG1	Del_2q37.3	0.501	1
FLT1	Del_5q12.1	0.501	1
KEL	Del_5q12.1	0.501	1
NUDT11	7q-Amp	0.501	1
RPTN	Del_16p13.3	0.501	1
S100A8	7q-Amp	0.501	1
C15orf23	KRTAP5-10	0.502	1
C15orf23	SLC27A5	0.502	1
EPHA4	Del_1p36.31	0.502	1
EPHA4	Del_4q34.3	0.502	1
EPHA7	Del_6q21	0.502	1
FGFR2	Del_12q23.3	0.502	1
KEL	6p-Del	0.502	1
MSTN	13q-Amp	0.502	1
NBPF1	Del_12q23.3	0.502	1
NBPF1	Del_13q34	0.502	1
POTEG	Del_12q23.3	0.502	1
SELP	Del_6q21	0.502	1
XIRP2	9p-Del	0.502	1
ZNF780B	13q-Amp	0.502	1
5q-Del	Del_8p23.3	0.502	1
C10orf54	Del_9p21.3	0.503	1
CAMTA1	9q-Del	0.503	1
CCNA1	Amp_1p12	0.503	1
CDC42BPA	Amp_1p12	0.503	1
CDC42BPA	Del_15q13.3	0.503	1
CDK4	Del_9p21.3	0.503	1
COL3A1	Del_10q21.1	0.503	1
EPHA4	RB1	0.503	1
EPHA4	RQCD1	0.503	1
KRT73	Amp_1p12	0.503	1
KRT73	Del_15q13.3	0.503	1
NGF	6p-Del	0.503	1
OR6C74	6p-Del	0.503	1
OXA1L	Del_9p21.3	0.503	1
RB1	Amp_11q13.3	0.503	1
RPTN	Del_9p21.3	0.503	1
RQCD1	6p-Del	0.503	1
RQCD1	Amp_11q13.3	0.503	1
ACSBG1	Del_1p36.31	0.504	1
ALPK2	Amp_15q26.2	0.504	1
APC	Amp_5p15.33	0.504	1
ATP5F1	9q-Del	0.504	1
ATP5F1	Amp_1q21.3	0.504	1
CCK	KCND2	0.504	1
CCK	9q-Del	0.504	1
COL3A1	Del_14q23.3	0.504	1
CTNNB1	Amp_22q13.2	0.504	1
FAM58A	9q-Del	0.504	1
GNAQ	Amp_1q21.3	0.504	1
HRAS	11q-Del	0.504	1
IGF1R	Del_4q34.3	0.504	1
KCND2	KRAS	0.504	1
KRAS	9q-Del	0.504	1
KYNU	Amp_22q13.2	0.504	1
MLL	Del_5p15.31	0.504	1
PDGFRA	Amp_5p15.33	0.504	1
SLC9A11	Amp_1q21.3	0.504	1
SYK	Del_1p36.31	0.504	1
BTK	8q-Amp	0.505	1
BTK	Del_16q24.3	0.505	1
CDK4	Del_9p23	0.505	1
EPHA6	22q-Amp	0.505	1
EPHA7	6q-Del	0.505	1
NUDT11	Del_9p23	0.505	1
NUP214	Del_16q24.3	0.505	1
OXA1L	Del_9p23	0.505	1
SELP	6q-Del	0.505	1
TP63	Amp_4q12	0.505	1
TP63	Amp_12q15	0.505	1
ZFX	Del_16q24.3	0.505	1
8q-Amp	Amp_12q15	0.505	1
Amp_12q15	Del_16q24.3	0.505	1
APC	Del_16p13.3	0.506	1
MYO3B	Del_10q26.3	0.506	1
PDGFRA	Del_16p13.3	0.506	1
XIRP2	Del_5q12.1	0.506	1
8p-Amp	Amp_12q14.1	0.506	1
8p-Amp	Del_16p13.3	0.506	1
Del_8p23.3	Del_16q24.3	0.506	1
CNTN5	Del_9p21.3	0.507	1
EPHA7	Del_9p21.3	0.507	1
NUDT11	THSD7B	0.507	1
ALPK2	Amp_13q31.3	0.508	1
ARID2	Del_13q34	0.508	1
C7orf58	11q-Del	0.508	1
COL3A1	14q-Del	0.508	1
CTNNA3	22q-Amp	0.508	1
DMC1	OR4S2	0.508	1
GML	USP9X	0.508	1
IDH1	KCND2	0.508	1
KCND2	Amp_12q15	0.508	1
NAP1L2	Amp_3p13	0.508	1
PTEN	Amp_3p13	0.508	1
RB1	Amp_6p24.3	0.508	1
GML	Del_14q23.3	0.509	1
GML	Del_16q12.1	0.509	1
SLC27A5	Amp_8q24.21	0.509	1
EPHA7	Amp_5p15.33	0.51	1
MAP2K1	MYO3B	0.51	1
NAP1L2	NRAS	0.51	1
SELP	20q-Amp	0.51	1
USP17L2	16q-Del	0.51	1
HRAS	7q-Amp	0.511	1
SLC9A11	Del_16q23.1	0.511	1
ACSBG1	Del_5q31.3	0.512	1
ALPK2	Del_12q23.3	0.512	1
ALPK2	Del_13q34	0.512	1
APCS	Del_5q31.3	0.512	1
ATP5F1	6q-Del	0.512	1
CCK	6q-Del	0.512	1
MYO3B	6q-Del	0.512	1
NAP1L2	7p-Amp	0.512	1
NUDT11	Del_5q31.3	0.512	1
PTPN11	Del_5q31.3	0.512	1
TTN	Del_12q23.3	0.512	1
7p-Amp	16q-Del	0.512	1
7p-Amp	Del_16q23.1	0.512	1
COL3A1	Del_4p16.3	0.513	1
GLI1	10p-Del	0.513	1
KIT	10p-Del	0.513	1
KRT73	10p-Del	0.513	1
USP17L2	Amp_11q13.3	0.513	1
USP9X	Amp_7q34	0.513	1
Amp_12q14.1	Del_5q31.3	0.513	1
APC	EMG1	0.514	1
CNTN5	DMC1	0.514	1
EMG1	PTPN22	0.514	1
EMG1	TRERF1	0.514	1
EMG1	Del_5p15.31	0.514	1
NRAS	ZFX	0.514	1
NRAS	Amp_12q15	0.514	1
TP63	Del_1p22.1	0.514	1
USH2A	Del_2q37.3	0.514	1
9q-Del	Amp_11q13.3	0.514	1
Amp_17q25.3	Del_16q24.3	0.514	1
CDKN2A	Amp_1p12	0.515	1
CDKN2A	Del_4p16.3	0.515	1
CDKN2A	Del_15q13.3	0.515	1
OR4S2	Del_9p23	0.515	1
ATP5F1	Amp_3p13	0.516	1
C15orf23	Amp_1p12	0.516	1
CDK4	Del_10q21.1	0.516	1
CTNNA3	KRAS	0.516	1
DCLK3	Del_15q21.1	0.516	1
FAM58A	Amp_3p13	0.516	1
GUCY2F	Del_15q13.3	0.516	1
NUDT11	Del_10q21.1	0.516	1
PARM1	Amp_1p12	0.516	1
PTPN11	Del_10q21.1	0.516	1
USP9X	18p-Del	0.516	1
6p-Amp	Del_Xp21.1	0.516	1
C7orf58	Amp_6q12	0.517	1
CCNA1	Del_8p23.3	0.517	1
CDC42BPA	Del_15q21.1	0.517	1
CYP3A4	14q-Del	0.517	1
DDX3X	Del_5q12.1	0.517	1
EZH2	9p-Del	0.517	1
EZH2	Del_8p23.3	0.517	1
GLI1	9p-Del	0.517	1
GLI1	Del_8p23.3	0.517	1
HRAS	Del_5q31.3	0.517	1
KIT	Del_8p23.3	0.517	1
KRT73	Del_15q21.1	0.517	1
MYO16	Del_5q31.3	0.517	1
PPP6C	Del_5q12.1	0.517	1
RIPK4	9p-Del	0.517	1
Amp_22q13.2	Del_10p15.3	0.517	1
APCS	STK19	0.518	1
COL3A1	20p-Amp	0.518	1
COL3A1	Del_2q37.3	0.518	1
CYP3A5	HSD11B1	0.518	1
DCLK3	11q-Del	0.518	1
USP9X	Del_6q21	0.518	1
9q-Del	Amp_8q24.21	0.518	1
Amp_17q25.3	Del_1p22.1	0.518	1
ANO4	CTNNB1	0.519	1
APCS	5q-Del	0.519	1
C10orf28	TPTE	0.519	1
20q-Amp	Del_9p21.3	0.519	1
Amp_5p15.33	Del_9p21.3	0.519	1
ARID2	Del_16q23.1	0.52	1
C15orf23	Del_3q13.31	0.52	1
C15orf23	Del_19p13.3	0.52	1
CAMTA1	6q-Del	0.52	1
FLT1	9q-Del	0.52	1
GUCY2F	Del_3q13.31	0.52	1
XIRP2	6q-Del	0.52	1
13q-Amp	Del_19p13.3	0.52	1
Amp_1q21.3	Del_1p36.31	0.52	1
Amp_1q21.3	Del_4q34.3	0.52	1
ANO4	Amp_20q13.33	0.521	1
ANO4	Del_11q23.3	0.521	1
CBL	CPA3	0.521	1
CBL	DDX3X	0.521	1
CBL	LGR6	0.521	1
CBL	TP63	0.521	1
CBL	8q-Amp	0.521	1
DDX3X	NGF	0.521	1
DDX3X	RB1	0.521	1
DDX3X	RQCD1	0.521	1
FAM58A	Amp_8q24.21	0.521	1
KRAS	Amp_8q24.21	0.521	1
KRTAP5-10	Amp_12q14.1	0.521	1
MSTN	Amp_12q14.1	0.521	1
MSTN	Del_16p13.3	0.521	1
NF1	Amp_7p22.1	0.521	1
NGF	PPP6C	0.521	1
NGF	8q-Amp	0.521	1
NGF	Del_16q24.3	0.521	1
OR6C74	RAC1	0.521	1
OR6C74	Del_16q24.3	0.521	1
PTPN22	Del_6q26	0.521	1
PTPN22	Del_10q26.3	0.521	1
RAC1	RB1	0.521	1
RELN	Amp_11q13.3	0.521	1
RQCD1	Amp_6q12	0.521	1
SLC27A5	Amp_12q14.1	0.521	1
XIRP2	Amp_13q31.3	0.521	1
ZNF780B	Amp_12q14.1	0.521	1
ZNF780B	Del_16p13.3	0.521	1
8p-Amp	Del_6q26	0.521	1
16q-Del	Amp_7p22.1	0.521	1
APC	Amp_7p22.1	0.522	1
BTK	CCNA1	0.522	1
BTK	CDC42BPA	0.522	1
BTK	EZH2	0.522	1
BTK	GLI1	0.522	1
BTK	KIT	0.522	1
CCNA1	Amp_4q12	0.522	1
CDC42BPA	Amp_4q12	0.522	1
EZH2	IDH1	0.522	1
EZH2	Amp_4q12	0.522	1
GLI1	ZFX	0.522	1
IDH1	KRT73	0.522	1
IDH1	RIPK4	0.522	1
KIT	ZFX	0.522	1
KIT	Amp_12q15	0.522	1
KRT73	Amp_4q12	0.522	1
KRT73	Amp_12q15	0.522	1
1q-Amp	9p-Del	0.522	1
8p-Amp	Del_9p23	0.522	1
Amp_4q12	Del_9p21.3	0.522	1
CTNNB1	Amp_1q44	0.523	1
NRAS	Del_8p23.3	0.523	1
9p-Del	Del_Xp21.1	0.523	1
APC	Del_16q24.3	0.524	1
COL3A1	Amp_13q31.3	0.524	1
PTPN22	8q-Amp	0.524	1
TRERF1	8q-Amp	0.524	1
Amp_11q13.3	Del_6q26	0.524	1
MYO16	11p-Del	0.525	1
PTPN22	Del_15q13.3	0.526	1
SLC9A11	6q-Del	0.526	1
ACSBG1	10q-Del	0.527	1
BTK	CTNNA3	0.527	1
BTK	Amp_3p13	0.527	1
CAMTA1	Amp_12q14.1	0.527	1
CTNNA3	Amp_4q12	0.527	1
CYP3A5	10q-Del	0.527	1
DSG3	20p-Amp	0.527	1
DSG3	Del_2q37.3	0.527	1
NUP214	Amp_3p13	0.527	1
22q-Amp	Del_16p13.3	0.527	1
11p-Del	Del_2q37.3	0.527	1
ARID2	5q-Del	0.528	1
C10orf28	PTEN	0.528	1
C10orf54	USP17L2	0.528	1
CCK	FRMPD4	0.528	1
CCNA1	Del_10q23.31	0.528	1
CDC42BPA	Del_10q23.31	0.528	1
CDK4	USP17L2	0.528	1
CDK4	Amp_13q31.3	0.528	1
DCLK3	18p-Del	0.528	1
EMG1	PTEN	0.528	1
EMG1	22q-Amp	0.528	1
EZH2	Del_10q23.31	0.528	1
FGFR2	18p-Del	0.528	1
FLT1	Del_1p36.31	0.528	1
GNAQ	MYO3B	0.528	1
KIT	Del_10q23.31	0.528	1
KRT73	Del_10q23.31	0.528	1
POTEG	20p-Amp	0.528	1
POTEG	18p-Del	0.528	1
S100A8	Amp_13q31.3	0.528	1
1q-Amp	Del_9p23	0.528	1
20p-Amp	Del_2q37.3	0.528	1
ALPK2	7p-Amp	0.529	1
APC	Del_13q34	0.529	1
MAP2K1	Del_12q23.3	0.529	1
MPP7	STK19	0.529	1
PTPN22	Del_12q23.3	0.529	1
PTPN22	Del_13q34	0.529	1
RELN	Amp_1q44	0.529	1
STK19	Amp_17q25.3	0.529	1
STK19	Del_1p22.1	0.529	1
TPTE	Amp_20q13.33	0.529	1
TRERF1	Del_13q34	0.529	1
Amp_15q26.2	Del_12q23.3	0.529	1
CNTN5	Amp_4q12	0.53	1
CTNNB1	GML	0.53	1
EPHA6	GUCY2F	0.53	1
GML	MAP2K1	0.53	1
MPP7	Amp_1q21.3	0.53	1
MSTN	Amp_7p22.1	0.53	1
PPP6C	Del_10q23.31	0.53	1
Amp_1q21.3	Del_4p16.3	0.53	1
APCS	Amp_7q34	0.531	1
CNTN5	Del_4p16.3	0.531	1
CNTN5	Del_10q26.3	0.531	1
EPHA7	Amp_13q31.3	0.531	1
KCND2	1q-Amp	0.531	1
SELP	Del_10q21.1	0.531	1
SLC38A4	Amp_13q31.3	0.531	1
XIRP2	1q-Amp	0.531	1
EZH2	14q-Del	0.532	1
FRMPD4	22q-Amp	0.532	1
KIT	14q-Del	0.532	1
KRT73	14q-Del	0.532	1
RIPK4	Del_5q12.1	0.532	1
GML	Del_6q26	0.533	1
OR4S2	11q-Del	0.533	1
RPTN	Del_Xp21.1	0.533	1
USP9X	11q-Del	0.533	1
7q-Amp	Amp_17q25.3	0.533	1
CDK4	Del_10p15.3	0.534	1
EPHA7	Del_15q13.3	0.534	1
GUCY2F	Del_8p23.3	0.534	1
GUCY2F	Del_15q21.1	0.534	1
NGF	Del_6q21	0.535	1
OR6C74	Del_6q21	0.535	1
TP53	Amp_12q15	0.535	1
CAMTA1	Amp_8q24.21	0.536	1
CPA3	8q-Amp	0.536	1
MLL	Del_16p13.3	0.536	1
SLC27A5	6p-Amp	0.536	1
TTN	Amp_20q13.33	0.536	1
ZNF780B	6p-Amp	0.536	1
ZNF780B	Del_9p23	0.536	1
17p-Del	Del_16p13.3	0.536	1
ALPK2	Amp_6p24.3	0.537	1
ATP5F1	Amp_7p22.1	0.537	1
CCK	Amp_7p22.1	0.537	1
CPA3	Del_1p36.31	0.537	1
CPA3	Del_4q34.3	0.537	1
CTNNA3	Del_3q13.31	0.537	1
CTNNA3	Del_19p13.3	0.537	1
CYP3A4	7p-Amp	0.537	1
CYP3A4	Del_1p36.31	0.537	1
CYP3A4	Del_4q34.3	0.537	1
DCLK3	7q-Amp	0.537	1
DDX3X	KEL	0.537	1
DMC1	17p-Del	0.537	1
DMC1	Amp_5p15.33	0.537	1
FAM58A	Amp_7p22.1	0.537	1
FLT1	Amp_6q12	0.537	1
GML	20q-Amp	0.537	1
GML	17p-Del	0.537	1
KRAS	Amp_7p22.1	0.537	1
KRTAP5-10	10q-Del	0.537	1
LGR6	7p-Amp	0.537	1
MLL	PTEN	0.537	1
MLL	22q-Amp	0.537	1
NBPF1	7q-Amp	0.537	1
OR4S2	8p-Amp	0.537	1
RAC1	7p-Amp	0.537	1
RAC1	Del_4q34.3	0.537	1
SLC38A4	Amp_6p24.3	0.537	1
TPTE	Amp_6q12	0.537	1
Amp_6q12	Del_4q34.3	0.537	1
Amp_7q34	Del_3q13.31	0.537	1
APC	Amp_6p24.3	0.538	1
ARID2	Del_2q37.3	0.538	1
ARID2	Del_16q24.3	0.538	1
C7orf58	20p-Amp	0.538	1
C7orf58	8q-Amp	0.538	1
C7orf58	18p-Del	0.538	1
DCLK3	Del_5q12.1	0.538	1
FGFR2	Del_5q12.1	0.538	1
GUCY2F	Del_9p23	0.538	1
TP63	14q-Del	0.538	1
20p-Amp	14q-Del	0.538	1
20p-Amp	Del_5q12.1	0.538	1
14q-Del	Del_2q37.3	0.538	1
Amp_6p24.3	Del_5p15.31	0.538	1
Del_2q37.3	Del_5q12.1	0.538	1
BTK	10p-Del	0.539	1
C15orf23	OR6C74	0.539	1
C15orf23	RQCD1	0.539	1
CBL	13q-Amp	0.539	1
GUCY2F	RB1	0.539	1
MAN1A1	10p-Del	0.539	1
MLL	Amp_17q25.3	0.539	1
MPP7	20q-Amp	0.539	1
NAP1L2	9p-Del	0.539	1
PARM1	RB1	0.539	1
PARM1	Del_11q23.3	0.539	1
RELN	9q-Del	0.539	1
RQCD1	13q-Amp	0.539	1
22q-Amp	9p-Del	0.539	1
CYP3A4	Amp_13q31.3	0.54	1
DDX3X	USP17L2	0.54	1
OR4S2	6q-Del	0.54	1
TTN	Del_1p36.31	0.54	1
USP17L2	Amp_6q12	0.54	1
ATP5F1	Del_12q23.3	0.541	1
CCK	Del_12q23.3	0.541	1
FAM58A	Del_12q23.3	0.541	1
GNAQ	Del_13q34	0.541	1
KRAS	Del_12q23.3	0.541	1
KRAS	Del_13q34	0.541	1
OR4S2	SLC27A5	0.541	1
PDGFRA	1q-Amp	0.541	1
7q-Amp	Amp_13q31.3	0.541	1
CCK	Del_9p21.3	0.542	1
CDKN2A	Del_Xp21.1	0.542	1
CNTN5	Del_1p36.31	0.542	1
MAP2K1	RELN	0.542	1
MLL	Del_15q13.3	0.542	1
OR4S2	Del_14q23.3	0.542	1
USH2A	7q-Amp	0.542	1
USH2A	Amp_7q34	0.542	1
ACSBG1	9q-Del	0.543	1
APCS	Amp_1q21.3	0.543	1
C10orf28	Del_19p13.3	0.543	1
IGF1R	Amp_1q21.3	0.543	1
SELP	10q-Del	0.543	1
16q-Del	Amp_11q13.3	0.543	1
9q-Del	Amp_7q34	0.543	1
ACSBG1	CYP3A5	0.544	1
APCS	CYP3A5	0.544	1
ARID2	Del_9p23	0.544	1
ATP5F1	Del_6q26	0.544	1
C10orf54	EPHA4	0.544	1
C10orf54	6p-Del	0.544	1
C10orf54	Amp_11q13.3	0.544	1
CDK4	EPHA4	0.544	1
CDK4	6p-Del	0.544	1
COL3A1	Del_4q34.3	0.544	1
DSG3	Amp_8q24.21	0.544	1
EPHA4	NUDT11	0.544	1
EPHA4	PTPN11	0.544	1
KEL	11q-Del	0.544	1
OXA1L	6p-Del	0.544	1
OXA1L	Amp_11q13.3	0.544	1
PTPN11	6p-Del	0.544	1
PTPN11	Amp_11q13.3	0.544	1
S100A8	6p-Del	0.544	1
CBL	11p-Del	0.545	1
DSG3	OR6C74	0.545	1
DSG3	RB1	0.545	1
DSG3	RQCD1	0.545	1
EZH2	11q-Del	0.545	1
FRMPD4	Amp_4q12	0.545	1
MYO3B	ZFX	0.545	1
MYO3B	Amp_4q12	0.545	1
MYO3B	Amp_12q15	0.545	1
NGF	11p-Del	0.545	1
OR6C74	11p-Del	0.545	1
RB1	11p-Del	0.545	1
CDC42BPA	Amp_6p24.3	0.546	1
EPHA7	Amp_3p13	0.546	1
KIT	STK19	0.546	1
KIT	Amp_6p24.3	0.546	1
RPTN	14q-Del	0.546	1
TTN	22q-Amp	0.546	1
BRAF	Del_9p21.3	0.547	1
DCLK3	Amp_22q13.2	0.547	1
FGFR2	Amp_22q13.2	0.547	1
NBPF1	Amp_20q13.33	0.547	1
OR4S2	Del_10q21.1	0.547	1
USP9X	7q-Amp	0.547	1
18p-Del	Amp_22q13.2	0.547	1
Amp_20q13.33	Del_2q37.3	0.547	1
APCS	Del_11q23.3	0.548	1
CCNA1	Del_1p36.31	0.548	1
CCNA1	Del_10q26.3	0.548	1
CDC42BPA	Del_4q34.3	0.548	1
COL3A1	10q-Del	0.548	1
CYP3A5	Del_11q23.3	0.548	1
DMC1	TPTE	0.548	1
DMC1	7p-Amp	0.548	1
EPHA4	Amp_22q13.2	0.548	1
EZH2	Del_10q26.3	0.548	1
KCND2	Del_16q24.3	0.548	1
KIT	Del_4q34.3	0.548	1
KRT73	Del_1p36.31	0.548	1
KRT73	Del_10q26.3	0.548	1
KRTAP5-10	Del_16q23.1	0.548	1
MSTN	Del_16q23.1	0.548	1
MYO16	Amp_20q13.33	0.548	1
NF1	PTPN22	0.548	1
NF1	Del_5p15.31	0.548	1
PDGFRA	Del_8p23.3	0.548	1
PDGFRA	Del_15q21.1	0.548	1
PTPN22	Del_15q21.1	0.548	1
SELP	Amp_20q13.33	0.548	1
SELP	Amp_22q13.2	0.548	1
SLC38A4	Amp_22q13.2	0.548	1
TPTE	Del_14q23.3	0.548	1
8p-Amp	Del_8p23.3	0.548	1
ALPK2	Amp_1p12	0.549	1
ANO4	Amp_7q34	0.549	1
CTNNB1	FGFR2	0.549	1
CTNNB1	20p-Amp	0.549	1
CTNNB1	18p-Del	0.549	1
EPHA7	Del_6q26	0.549	1
FGFR2	MAP2K1	0.549	1
GML	Del_10p15.3	0.549	1
MAP2K1	POTEG	0.549	1
POTEG	Amp_15q26.2	0.549	1
SELP	Del_6q26	0.549	1
SLC38A4	Del_6q26	0.549	1
TP53	Del_16q24.3	0.549	1
10q-Del	Amp_3p13	0.549	1
ALPK2	Amp_12q15	0.55	1
APCS	Del_9p21.3	0.55	1
BTK	Amp_22q13.2	0.55	1
FLT1	Del_16q23.1	0.55	1
FRMPD4	16q-Del	0.55	1
MAN1A1	Amp_20q13.33	0.55	1
MLL	Del_Xp21.1	0.55	1
NUP214	Amp_20q13.33	0.55	1
NUP214	Amp_22q13.2	0.55	1
ZFX	Amp_22q13.2	0.55	1
Amp_12q14.1	Del_19p13.3	0.55	1
CDKN2A	Del_3q13.31	0.551	1
KYNU	6p-Amp	0.551	1
MAP2K1	6p-Amp	0.551	1
MYO16	7p-Amp	0.551	1
NRAS	NUDT11	0.551	1
NRAS	S100A8	0.551	1
SLC9A11	Amp_15q26.2	0.551	1
CBL	9p-Del	0.552	1
CYP3A5	SLC38A4	0.552	1
DMC1	ZFX	0.552	1
DMC1	Amp_4q12	0.552	1
DMC1	Amp_12q15	0.552	1
GML	IDH1	0.552	1
GML	MAN1A1	0.552	1
GML	Amp_12q15	0.552	1
IGF1R	SELP	0.552	1
OR6C74	9p-Del	0.552	1
RQCD1	9p-Del	0.552	1
USH2A	Del_14q23.3	0.552	1
9q-Del	Amp_1p12	0.552	1
ARID2	13q-Amp	0.553	1
ARID2	Del_5q31.3	0.553	1
ATP5F1	Del_2q37.3	0.553	1
C15orf23	14q-Del	0.553	1
CCK	DCLK3	0.553	1
CCK	POTEG	0.553	1
CCK	20p-Amp	0.553	1
CCK	18p-Del	0.553	1
CCK	Del_2q37.3	0.553	1
CDK4	EPHA6	0.553	1
DCLK3	KRAS	0.553	1
EPHA4	1q-Amp	0.553	1
EPHA6	NUDT11	0.553	1
FAM58A	POTEG	0.553	1
FAM58A	20p-Amp	0.553	1
FAM58A	18p-Del	0.553	1
FAM58A	Del_2q37.3	0.553	1
FGFR2	GNAQ	0.553	1
FGFR2	KRAS	0.553	1
GNAQ	NBPF1	0.553	1
GNAQ	20p-Amp	0.553	1
GNAQ	18p-Del	0.553	1
GNAQ	Del_2q37.3	0.553	1
GUCY2F	Del_5q12.1	0.553	1
KRAS	POTEG	0.553	1
KRAS	18p-Del	0.553	1
MPP7	Amp_13q31.3	0.553	1
PARM1	14q-Del	0.553	1
USP17L2	Del_1p22.1	0.553	1
1q-Amp	6p-Del	0.553	1
Amp_13q31.3	Amp_17q25.3	0.553	1
Amp_13q31.3	Del_4p16.3	0.553	1
Amp_20q13.33	Del_5q31.3	0.553	1
CYP3A4	Amp_7q34	0.554	1
HSD11B1	Del_16q24.3	0.554	1
OR4S2	Amp_8q24.21	0.554	1
PPP6C	Amp_7q34	0.554	1
Amp_6q12	Amp_7q34	0.554	1
APC	POTEG	0.555	1
APC	20p-Amp	0.555	1
APC	18p-Del	0.555	1
DSG3	Del_15q21.1	0.555	1
FGFR2	Del_5p15.31	0.555	1
FLT1	5q-Del	0.555	1
MLL	Amp_8q24.21	0.555	1
PDGFRA	18p-Del	0.555	1
PTPN22	Del_2q37.3	0.555	1
SYK	6q-Del	0.555	1
TRERF1	18p-Del	0.555	1
TRERF1	Del_2q37.3	0.555	1
20p-Amp	Del_5p15.31	0.555	1
Amp_7q34	Del_5q31.3	0.555	1
BRAF	TPTE	0.556	1
CBL	Amp_20q13.33	0.556	1
CBL	Amp_22q13.2	0.556	1
KCND2	Amp_7q34	0.556	1
LGR6	5q-Del	0.556	1
PPP6C	5q-Del	0.556	1
RB1	Amp_22q13.2	0.556	1
RQCD1	Amp_20q13.33	0.556	1
SELP	Amp_1q44	0.556	1
SLC27A5	Del_11q23.3	0.556	1
TP63	Amp_6p24.3	0.556	1
XIRP2	Del_1p36.31	0.556	1
XIRP2	Del_4q34.3	0.556	1
Del_2q37.3	Del_5q31.3	0.556	1
CAMTA1	Del_12q23.3	0.557	1
CAMTA1	Del_13q34	0.557	1
CBL	Del_16p13.3	0.557	1
CDC42BPA	7q-Amp	0.557	1
CDC42BPA	Amp_1q44	0.557	1
KRT73	7q-Amp	0.557	1
NAP1L2	Del_12q23.3	0.557	1
NGF	Del_16p13.3	0.557	1
RB1	Amp_7q34	0.557	1
RB1	Amp_12q14.1	0.557	1
RIPK4	Amp_1q44	0.557	1
RQCD1	Amp_12q14.1	0.557	1
22q-Amp	Del_13q34	0.557	1
Amp_6q12	Del_9p21.3	0.557	1
ALPK2	6q-Del	0.558	1
OR4S2	22q-Amp	0.558	1
PTEN	USP9X	0.558	1
TP53	Amp_17q25.3	0.558	1
COL3A1	8p-Amp	0.559	1
EPHA7	Del_8p23.3	0.559	1
EPHA7	Del_15q21.1	0.559	1
NAP1L2	Amp_1p12	0.559	1
SELP	Del_8p23.3	0.559	1
TP63	Del_14q23.3	0.559	1
TRERF1	11q-Del	0.559	1
Amp_1p12	Del_Xp21.1	0.559	1
C10orf54	CYP3A4	0.56	1
C10orf54	PPP6C	0.56	1
C10orf54	Amp_6q12	0.56	1
CDK4	CPA3	0.56	1
CDK4	DDX3X	0.56	1
CDK4	PPP6C	0.56	1
CDK4	RAC1	0.56	1
CDK4	Amp_6q12	0.56	1
COL3A1	8q-Amp	0.56	1
CPA3	NUDT11	0.56	1
CPA3	PTPN11	0.56	1
CYP3A4	NUDT11	0.56	1
DDX3X	NUDT11	0.56	1
DDX3X	OXA1L	0.56	1
DDX3X	PTPN11	0.56	1
DDX3X	S100A8	0.56	1
LGR6	NUDT11	0.56	1
LGR6	S100A8	0.56	1
NUDT11	Amp_6q12	0.56	1
PPP6C	PTPN11	0.56	1
PPP6C	S100A8	0.56	1
PTPN11	Amp_6q12	0.56	1
RELN	Del_16q23.1	0.56	1
S100A8	Amp_6q12	0.56	1
CNTN5	Del_10q21.1	0.561	1
DCLK3	Del_1p36.31	0.561	1
FLT1	20p-Amp	0.561	1
FRMPD4	Del_19p13.3	0.561	1
MSTN	Del_16q12.1	0.561	1
MYO3B	Del_19p13.3	0.561	1
NGF	Del_10q23.31	0.561	1
SLC27A5	Del_14q23.3	0.561	1
Amp_7p22.1	Del_5q12.1	0.561	1
Amp_8q24.21	Del_4q34.3	0.561	1
BRAF	Del_16q24.3	0.562	1
CAMTA1	8q-Amp	0.562	1
CTNNB1	MSTN	0.562	1
CTNNB1	ZNF780B	0.562	1
EZH2	Del_9p23	0.562	1
GLI1	Del_9p23	0.562	1
KIT	Del_9p23	0.562	1
KRT73	Del_9p23	0.562	1
KRTAP5-10	Amp_15q26.2	0.562	1
MAP2K1	ZNF780B	0.562	1
MSTN	Amp_15q26.2	0.562	1
MYO3B	Amp_6p24.3	0.562	1
RIPK4	Del_9p23	0.562	1
SLC27A5	Amp_15q26.2	0.562	1
TTN	Amp_1q44	0.562	1
USP9X	Del_5q31.3	0.562	1
ZNF780B	Amp_15q26.2	0.562	1
22q-Amp	Del_16q24.3	0.562	1
9p-Del	Amp_13q31.3	0.562	1
BRAF	TP53	0.563	1
EPHA7	Amp_11q13.3	0.563	1
EZH2	5q-Del	0.563	1
GLI1	5q-Del	0.563	1
MYO16	6p-Del	0.563	1
RIPK4	5q-Del	0.563	1
SELP	Amp_7p22.1	0.563	1
SLC38A4	6p-Del	0.563	1
TRERF1	11p-Del	0.563	1
ANO4	BRAF	0.564	1
CNTN5	20p-Amp	0.564	1
FRMPD4	Del_16q23.1	0.564	1
IDH1	Del_13q34	0.564	1
NUP214	Del_12q23.3	0.564	1
NUP214	Del_13q34	0.564	1
STK19	Amp_3p13	0.564	1
ALPK2	10q-Del	0.565	1
ANO4	Amp_4q12	0.565	1
DDX3X	6p-Del	0.565	1
DDX3X	Amp_11q13.3	0.565	1
DMC1	NF1	0.565	1
GML	Del_15q21.1	0.565	1
LGR6	Amp_11q13.3	0.565	1
PPP6C	6p-Del	0.565	1
RAC1	Amp_11q13.3	0.565	1
USH2A	11p-Del	0.565	1
USH2A	9p-Del	0.565	1
XIRP2	Amp_3p13	0.565	1
10q-Del	Amp_22q13.2	0.565	1
ATP5F1	8p-Amp	0.566	1
ATP5F1	Del_5p15.31	0.566	1
FAM58A	PTPN22	0.566	1
FAM58A	8p-Amp	0.566	1
FAM58A	Del_5p15.31	0.566	1
GNAQ	PDGFRA	0.566	1
GNAQ	Del_5p15.31	0.566	1
HRAS	TP63	0.566	1
HRAS	Del_16q24.3	0.566	1
KRAS	PTPN22	0.566	1
KRAS	Del_5p15.31	0.566	1
OR6C74	9q-Del	0.566	1
OR6C74	Amp_1q21.3	0.566	1
RQCD1	9q-Del	0.566	1
MAP2K1	Del_16q23.1	0.567	1
TTN	Del_9p21.3	0.567	1
ANO4	Del_2q37.3	0.568	1
C7orf58	NRAS	0.568	1
CPA3	Amp_1q21.3	0.568	1
CYP3A4	9q-Del	0.568	1
DDX3X	Amp_1q21.3	0.568	1
NF1	Del_Xp21.1	0.568	1
TPTE	14q-Del	0.568	1
TPTE	Del_5q12.1	0.568	1
7p-Amp	Del_5q12.1	0.568	1
Amp_1q21.3	Amp_6q12	0.568	1
ACSBG1	Del_1p22.1	0.569	1
BRAF	Del_8p23.3	0.569	1
BTK	7p-Amp	0.569	1
CAMTA1	Amp_7p22.1	0.569	1
CYP3A5	MPP7	0.569	1
CYP3A5	Amp_17q25.3	0.569	1
CYP3A5	Del_1p22.1	0.569	1
CYP3A5	Del_4p16.3	0.569	1
EPHA6	Del_16q24.3	0.569	1
IGF1R	Amp_17q25.3	0.569	1
IGF1R	Del_4p16.3	0.569	1
PPP6C	RELN	0.569	1
TPTE	Amp_12q15	0.569	1
USH2A	8p-Amp	0.569	1
7p-Amp	Amp_12q15	0.569	1
APC	ARID2	0.57	1
APCS	CCNA1	0.57	1
APCS	EZH2	0.57	1
APCS	RIPK4	0.57	1
ARID2	8p-Amp	0.57	1
C7orf58	8p-Amp	0.57	1
CCNA1	Del_5q31.3	0.57	1
CNTN5	11p-Del	0.57	1
CTNNB1	TRERF1	0.57	1
CTNNB1	1q-Amp	0.57	1
CYP3A5	EZH2	0.57	1
CYP3A5	KIT	0.57	1
EPHA4	11q-Del	0.57	1
EZH2	SYK	0.57	1
EZH2	Del_5q31.3	0.57	1
GML	NRAS	0.57	1
KRT73	Del_5q31.3	0.57	1
KYNU	8p-Amp	0.57	1
MAP2K1	TRERF1	0.57	1
MAP2K1	8p-Amp	0.57	1
MAP2K1	Del_5p15.31	0.57	1
MLL	Del_8p23.3	0.57	1
MLL	Del_15q21.1	0.57	1
PDGFRA	14q-Del	0.57	1
PDGFRA	Del_5q12.1	0.57	1
PTPN22	Del_5q12.1	0.57	1
TP63	Del_1p36.31	0.57	1
TP63	Del_4q34.3	0.57	1
TRERF1	Amp_15q26.2	0.57	1
8q-Amp	Del_1p36.31	0.57	1
8q-Amp	Del_4q34.3	0.57	1
14q-Del	Del_5p15.31	0.57	1
17p-Del	Del_15q21.1	0.57	1
Amp_5p15.33	Del_8p23.3	0.57	1
Amp_15q26.2	Del_5p15.31	0.57	1
C7orf58	Del_6q21	0.571	1
CYP3A4	DSG3	0.571	1
DMC1	RELN	0.571	1
GML	RELN	0.571	1
NBPF1	Amp_7q34	0.571	1
POTEG	Amp_7q34	0.571	1
TP53	Amp_6q12	0.571	1
11p-Del	Amp_6q12	0.571	1
Amp_5p15.33	Del_3q13.31	0.571	1
ANO4	9q-Del	0.572	1
C15orf23	Del_4q34.3	0.572	1
GUCY2F	Del_1p36.31	0.572	1
KEL	13q-Amp	0.572	1
THSD7B	Del_8p23.3	0.572	1
Del_8p23.3	Del_16p13.3	0.572	1
COL3A1	20q-Amp	0.573	1
MLL	11q-Del	0.573	1
NF1	Amp_7q34	0.573	1
ANO4	Del_15q13.3	0.574	1
COL3A1	7p-Amp	0.574	1
CYP3A5	Del_6q26	0.575	1
DMC1	STK19	0.575	1
FLT1	Del_16q12.1	0.575	1
GML	HSD11B1	0.575	1
GML	STK19	0.575	1
NUP214	Amp_6p24.3	0.575	1
RPTN	Del_4q34.3	0.575	1
7p-Amp	Del_12q23.3	0.575	1
CBL	OR4S2	0.576	1
CBL	USP9X	0.576	1
CNTN5	10q-Del	0.576	1
EMG1	7q-Amp	0.576	1
NGF	USP9X	0.576	1
OR4S2	RB1	0.576	1
OR4S2	20q-Amp	0.576	1
OR4S2	Amp_5p15.33	0.576	1
RELN	Del_10q23.31	0.576	1
KCND2	10p-Del	0.577	1
XIRP2	Del_19p13.3	0.577	1
ARID2	Del_Xp21.1	0.578	1
C10orf54	13q-Amp	0.578	1
C15orf23	CDK4	0.578	1
C15orf23	NUDT11	0.578	1
CDK4	GUCY2F	0.578	1
CDK4	13q-Amp	0.578	1
GUCY2F	NUDT11	0.578	1
GUCY2F	PTPN11	0.578	1
NUDT11	PARM1	0.578	1
PARM1	PTPN11	0.578	1
S100A8	13q-Amp	0.578	1
SLC9A11	Amp_22q13.2	0.578	1
TRERF1	7q-Amp	0.578	1
Amp_1q44	Del_1p36.31	0.578	1
Amp_20q13.33	Del_16q24.3	0.578	1
Amp_22q13.2	Del_16q24.3	0.578	1
ARID2	DMC1	0.579	1
ATP5F1	PTEN	0.579	1
C15orf23	8q-Amp	0.579	1
CAMTA1	FAM58A	0.579	1
CAMTA1	GNAQ	0.579	1
CCK	NAP1L2	0.579	1
CCK	PTEN	0.579	1
CDC42BPA	16q-Del	0.579	1
CNTN5	GNAQ	0.579	1
DCLK3	NRAS	0.579	1
FAM58A	22q-Amp	0.579	1
GML	Del_5q12.1	0.579	1
KIT	16q-Del	0.579	1
KRAS	22q-Amp	0.579	1
KRT73	16q-Del	0.579	1
NGF	Del_10q26.3	0.579	1
RIPK4	16q-Del	0.579	1
Amp_22q13.2	Del_15q21.1	0.579	1
CAMTA1	Del_15q21.1	0.58	1
HRAS	TP53	0.58	1
HRAS	11p-Del	0.58	1
OR4S2	Del_19p13.3	0.58	1
USP9X	Del_3q13.31	0.58	1
22q-Amp	Del_15q21.1	0.58	1
APC	BRAF	0.581	1
APC	Del_5p15.31	0.581	1
BRAF	PTPN22	0.581	1
PDGFRA	8p-Amp	0.581	1
Amp_1q44	Del_5q31.3	0.581	1
Amp_17q25.3	Amp_22q13.2	0.581	1
Amp_17q25.3	Del_10q21.1	0.581	1
CAMTA1	18p-Del	0.582	1
CAMTA1	Del_2q37.3	0.582	1
DCLK3	PTEN	0.582	1
DCLK3	22q-Amp	0.582	1
FGFR2	PTEN	0.582	1
FLT1	16q-Del	0.582	1
GML	Del_9p21.3	0.582	1
NBPF1	PTEN	0.582	1
POTEG	PTEN	0.582	1
POTEG	22q-Amp	0.582	1
22q-Amp	18p-Del	0.582	1
22q-Amp	Del_2q37.3	0.582	1
APC	Amp_20q13.33	0.583	1
BTK	MSTN	0.583	1
BTK	20p-Amp	0.583	1
BTK	Del_2q37.3	0.583	1
CDKN2A	7p-Amp	0.583	1
DDX3X	Del_10p15.3	0.583	1
FGFR2	Amp_4q12	0.583	1
HSD11B1	11p-Del	0.583	1
IDH1	KRTAP5-10	0.583	1
IDH1	MSTN	0.583	1
IDH1	NBPF1	0.583	1
IDH1	ZNF780B	0.583	1
IDH1	20p-Amp	0.583	1
KRTAP5-10	Amp_12q15	0.583	1
MAN1A1	18p-Del	0.583	1
MSTN	ZFX	0.583	1
MSTN	Amp_12q15	0.583	1
NBPF1	Amp_4q12	0.583	1
POTEG	Amp_4q12	0.583	1
PTEN	1q-Amp	0.583	1
STK19	11p-Del	0.583	1
TRERF1	Amp_22q13.2	0.583	1
ZFX	Del_2q37.3	0.583	1
ZNF780B	Amp_4q12	0.583	1
ZNF780B	Amp_12q15	0.583	1
8q-Amp	Amp_3p13	0.583	1
18p-Del	Amp_12q15	0.583	1
Amp_6q12	Del_10p15.3	0.583	1
BRAF	Del_3q13.31	0.584	1
CTNNB1	Del_14q23.3	0.584	1
EPHA7	14q-Del	0.584	1
KYNU	Del_16q12.1	0.584	1
MAP2K1	Del_16q12.1	0.584	1
MYO16	14q-Del	0.584	1
SLC38A4	Del_5q12.1	0.584	1
STK19	Del_10q23.31	0.584	1
XIRP2	Del_Xp21.1	0.584	1
5q-Del	Del_2q37.3	0.584	1
EPHA4	Amp_17q25.3	0.585	1
HSD11B1	NRAS	0.585	1
Amp_8q24.21	Del_3q13.31	0.585	1
Del_3q13.31	Del_12q23.3	0.585	1
CBL	Amp_8q24.21	0.586	1
CDK4	TP63	0.586	1
CDK4	Del_16q24.3	0.586	1
DSG3	14q-Del	0.586	1
DSG3	Del_5q12.1	0.586	1
NGF	Amp_8q24.21	0.586	1
NUDT11	8q-Amp	0.586	1
OXA1L	8q-Amp	0.586	1
PTEN	Del_9p21.3	0.586	1
PTPN11	8q-Amp	0.586	1
PTPN11	Del_16q24.3	0.586	1
C10orf28	6p-Del	0.587	1
C10orf28	Amp_11q13.3	0.587	1
CTNNB1	9q-Del	0.587	1
CTNNB1	Amp_1q21.3	0.587	1
EMG1	6p-Del	0.587	1
EMG1	Amp_11q13.3	0.587	1
FLT1	Del_Xp21.1	0.587	1
FRMPD4	Del_14q23.3	0.587	1
HRAS	Amp_20q13.33	0.587	1
HRAS	Amp_22q13.2	0.587	1
KEL	Del_Xp21.1	0.587	1
7q-Amp	Del_16q24.3	0.587	1
8q-Amp	6q-Del	0.587	1
Amp_8q24.21	Del_16q23.1	0.587	1
Del_1p36.31	Del_Xp21.1	0.587	1
ATP5F1	Del_6q21	0.588	1
CPA3	Amp_22q13.2	0.588	1
IDH1	Amp_1q44	0.588	1
KRTAP5-10	20q-Amp	0.588	1
KRTAP5-10	17p-Del	0.588	1
KRTAP5-10	Amp_5p15.33	0.588	1
MSTN	20q-Amp	0.588	1
POTEG	Amp_1q21.3	0.588	1
SLC27A5	Amp_5p15.33	0.588	1
Amp_1q44	Amp_12q15	0.588	1
EPHA6	6p-Amp	0.589	1
NAP1L2	Del_6q26	0.589	1
PARM1	9p-Del	0.589	1
XIRP2	Amp_6p24.3	0.589	1
13q-Amp	9p-Del	0.589	1
11q-Del	Amp_3p13	0.589	1
ARID2	Del_16p13.3	0.59	1
CAMTA1	MAP2K1	0.59	1
CAMTA1	Amp_15q26.2	0.59	1
CPA3	RAC1	0.59	1
CTNNB1	PTEN	0.59	1
DDX3X	LGR6	0.59	1
DDX3X	RAC1	0.59	1
IGF1R	Amp_7p22.1	0.59	1
KYNU	22q-Amp	0.59	1
LGR6	Amp_6q12	0.59	1
MAP2K1	NAP1L2	0.59	1
MAP2K1	PTEN	0.59	1
PTEN	Amp_15q26.2	0.59	1
Amp_12q14.1	Del_5q12.1	0.59	1
BRAF	CYP3A4	0.591	1
BRAF	DDX3X	0.591	1
BRAF	LGR6	0.591	1
GML	Del_6q21	0.591	1
GUCY2F	5q-Del	0.591	1
NRAS	Del_10p15.3	0.591	1
PARM1	5q-Del	0.591	1
TPTE	Amp_17q25.3	0.591	1
APC	Del_4q34.3	0.592	1
C15orf23	6p-Del	0.592	1
C15orf23	Amp_11q13.3	0.592	1
EPHA4	13q-Amp	0.592	1
GUCY2F	6p-Del	0.592	1
GUCY2F	Amp_11q13.3	0.592	1
NGF	6p-Amp	0.592	1
RQCD1	SLC9A11	0.592	1
TRERF1	Del_1p36.31	0.592	1
13q-Amp	6p-Del	0.592	1
13q-Amp	Amp_11q13.3	0.592	1
8p-Amp	Del_1p36.31	0.592	1
8p-Amp	Del_4q34.3	0.592	1
ATP5F1	Del_3q13.31	0.593	1
ATP5F1	Del_19p13.3	0.593	1
CCK	Del_19p13.3	0.593	1
CNTN5	1q-Amp	0.593	1
FAM58A	Del_3q13.31	0.593	1
FAM58A	Del_19p13.3	0.593	1
GNAQ	Del_3q13.31	0.593	1
KRAS	Del_3q13.31	0.593	1
KRAS	Del_19p13.3	0.593	1
OR4S2	Amp_1p12	0.593	1
RPTN	Del_10p15.3	0.593	1
RPTN	Del_14q23.3	0.593	1
TTN	Amp_6p24.3	0.593	1
USP9X	Amp_1p12	0.593	1
USP9X	Del_15q13.3	0.593	1
9q-Del	Del_15q21.1	0.593	1
CAMTA1	Del_9p23	0.594	1
CCNA1	SLC38A4	0.594	1
DMC1	FLT1	0.594	1
DMC1	KEL	0.594	1
DMC1	Del_1p36.31	0.594	1
EZH2	SELP	0.594	1
GML	Del_1p36.31	0.594	1
10q-Del	Amp_4q12	0.594	1
10q-Del	Amp_12q15	0.594	1
C10orf54	Amp_12q14.1	0.595	1
C10orf54	Del_6q26	0.595	1
C10orf54	Del_16p13.3	0.595	1
CDK4	Amp_12q14.1	0.595	1
CNTN5	Del_16p13.3	0.595	1
EPHA6	Del_12q23.3	0.595	1
EPHA6	Del_13q34	0.595	1
NUDT11	Amp_12q14.1	0.595	1
OXA1L	Del_16p13.3	0.595	1
PTPN11	Amp_12q14.1	0.595	1
PTPN11	Del_16p13.3	0.595	1
S100A8	Amp_12q14.1	0.595	1
S100A8	Del_16p13.3	0.595	1
USP17L2	Del_16p13.3	0.595	1
C10orf54	Amp_6p24.3	0.596	1
CBL	CTNNB1	0.596	1
CBL	KYNU	0.596	1
CBL	MAP2K1	0.596	1
CBL	Amp_15q26.2	0.596	1
CCNA1	KIT	0.596	1
CCNA1	KRT73	0.596	1
CTNNB1	NGF	0.596	1
CTNNB1	OR6C74	0.596	1
CTNNB1	RB1	0.596	1
EZH2	GLI1	0.596	1
EZH2	KIT	0.596	1
EZH2	KRT73	0.596	1
KIT	RIPK4	0.596	1
KRT73	RIPK4	0.596	1
KYNU	RB1	0.596	1
KYNU	RQCD1	0.596	1
MAP2K1	RB1	0.596	1
MAP2K1	RQCD1	0.596	1
PTPN22	Del_5q31.3	0.596	1
RB1	Amp_15q26.2	0.596	1
RELN	Amp_12q15	0.596	1
RQCD1	Amp_15q26.2	0.596	1
S100A8	Amp_6p24.3	0.596	1
SLC9A11	17p-Del	0.596	1
SLC9A11	Amp_4q12	0.596	1
SLC9A11	Amp_12q15	0.596	1
TRERF1	Del_5q31.3	0.596	1
Del_9p21.3	Del_Xp21.1	0.596	1
C7orf58	17p-Del	0.597	1
COL3A1	Del_11q23.3	0.597	1
DSG3	1q-Amp	0.597	1
KCND2	Amp_3p13	0.597	1
LGR6	MYO16	0.597	1
PPP6C	SELP	0.597	1
PPP6C	SLC38A4	0.597	1
RPTN	Del_6q26	0.597	1
20q-Amp	Del_5q12.1	0.597	1
ACSBG1	GML	0.598	1
CPA3	Del_6q26	0.598	1
CYP3A5	DMC1	0.598	1
DMC1	SYK	0.598	1
GML	IGF1R	0.598	1
Amp_6p24.3	Del_14q23.3	0.598	1
MYO3B	Amp_17q25.3	0.599	1
MYO3B	Del_1p22.1	0.599	1
CDKN2A	KEL	0.6	1
CDKN2A	Amp_7q34	0.6	1
HSD11B1	Del_13q34	0.6	1
NAP1L2	11p-Del	0.6	1
STK19	Del_13q34	0.6	1
TRERF1	Del_10p15.3	0.6	1
1q-Amp	Amp_6q12	0.6	1
8q-Amp	Del_3q13.31	0.6	1
Amp_6p24.3	Del_16p13.3	0.6	1
ANO4	Del_9p21.3	0.601	1
BRAF	Amp_15q26.2	0.601	1
EZH2	Amp_7q34	0.601	1
KRTAP5-10	Del_15q13.3	0.601	1
MSTN	Amp_1p12	0.601	1
MSTN	Del_15q13.3	0.601	1
RELN	1q-Amp	0.601	1
SLC27A5	Amp_1p12	0.601	1
SLC27A5	Del_15q13.3	0.601	1
XIRP2	Del_8p23.3	0.601	1
ZNF780B	Del_15q13.3	0.601	1
CAMTA1	14q-Del	0.602	1
CAMTA1	Del_5q12.1	0.602	1
CTNNA3	CYP3A5	0.602	1
EPHA4	6p-Amp	0.602	1
NAP1L2	Del_5q12.1	0.602	1
PTEN	14q-Del	0.602	1
RPTN	Amp_13q31.3	0.602	1
USP17L2	Del_14q23.3	0.602	1
USP17L2	Del_16q12.1	0.602	1
7q-Amp	5q-Del	0.602	1
Amp_11q13.3	Del_5q31.3	0.602	1
ANO4	NRAS	0.603	1
APC	BTK	0.603	1
BTK	8p-Amp	0.603	1
C10orf28	RAC1	0.603	1
C10orf28	Amp_6q12	0.603	1
CPA3	EMG1	0.603	1
CTNNB1	THSD7B	0.603	1
DDX3X	EMG1	0.603	1
EMG1	LGR6	0.603	1
EMG1	PPP6C	0.603	1
EMG1	RAC1	0.603	1
EMG1	Amp_6q12	0.603	1
EPHA7	Del_13q34	0.603	1
IDH1	PDGFRA	0.603	1
IDH1	TRERF1	0.603	1
IDH1	8p-Amp	0.603	1
IDH1	Del_5p15.31	0.603	1
PDGFRA	Amp_4q12	0.603	1
PTPN22	Amp_4q12	0.603	1
PTPN22	Amp_12q15	0.603	1
SELP	Del_13q34	0.603	1
TRERF1	Amp_4q12	0.603	1
8p-Amp	Amp_12q15	0.603	1
5q-Del	Amp_6p24.3	0.603	1
9p-Del	Del_3q13.31	0.603	1
ANO4	Del_8p23.3	0.604	1
CCK	TPTE	0.604	1
FRMPD4	10q-Del	0.604	1
OR6C74	Del_16q23.1	0.604	1
C10orf54	Amp_1q44	0.605	1
DSG3	Del_10q23.31	0.605	1
FGFR2	6q-Del	0.605	1
PTPN11	Amp_1q44	0.605	1
STK19	Del_10q26.3	0.605	1
TP53	Del_10q23.31	0.605	1
APCS	TP63	0.606	1
CBL	Amp_7p22.1	0.606	1
COL3A1	DMC1	0.606	1
CYP3A5	8q-Amp	0.606	1
EPHA6	Del_9p21.3	0.606	1
NAP1L2	Amp_1q44	0.606	1
OR6C74	Amp_7p22.1	0.606	1
RQCD1	Amp_7p22.1	0.606	1
10p-Del	Amp_22q13.2	0.606	1
16q-Del	Amp_1q21.3	0.606	1
ALPK2	Del_16q23.1	0.607	1
APC	22q-Amp	0.607	1
ARID2	9p-Del	0.607	1
BRAF	STK19	0.607	1
C10orf54	11p-Del	0.607	1
CAMTA1	8p-Amp	0.607	1
CDK4	DSG3	0.607	1
NAP1L2	8p-Amp	0.607	1
NUDT11	11p-Del	0.607	1
OXA1L	11p-Del	0.607	1
PTEN	PTPN22	0.607	1
PTPN11	TP53	0.607	1
Amp_5p15.33	Del_10q23.31	0.607	1
Amp_22q13.2	Del_10q21.1	0.607	1
CNTN5	10p-Del	0.608	1
GML	5q-Del	0.608	1
STK19	10p-Del	0.608	1
GNAQ	Del_10q23.31	0.609	1
KEL	Del_16p13.3	0.609	1
MYO3B	1q-Amp	0.609	1
NBPF1	Del_3q13.31	0.609	1
NBPF1	Del_19p13.3	0.609	1
THSD7B	22q-Amp	0.609	1
Del_2q37.3	Del_19p13.3	0.609	1
CCNA1	10q-Del	0.61	1
CDC42BPA	Amp_17q25.3	0.61	1
CYP3A4	NRAS	0.61	1
EZH2	10q-Del	0.61	1
EZH2	Del_1p22.1	0.61	1
EZH2	Del_4p16.3	0.61	1
GLI1	Amp_17q25.3	0.61	1
GML	9p-Del	0.61	1
KIT	Amp_17q25.3	0.61	1
KRT73	10q-Del	0.61	1
KRT73	Amp_17q25.3	0.61	1
KRT73	Del_4p16.3	0.61	1
MYO16	Del_4q34.3	0.61	1
SLC38A4	Del_1p36.31	0.61	1
SLC38A4	Del_4q34.3	0.61	1
THSD7B	Del_9p21.3	0.61	1
13q-Amp	Amp_7q34	0.61	1
BTK	Del_16q23.1	0.611	1
CTNNB1	Del_19p13.3	0.611	1
EPHA6	Del_8p23.3	0.611	1
GUCY2F	16q-Del	0.611	1
KYNU	Del_19p13.3	0.611	1
NBPF1	Del_9p23	0.611	1
NF1	USP9X	0.611	1
NUP214	Del_16q23.1	0.611	1
PTPN22	Del_6q21	0.611	1
USP9X	Del_15q21.1	0.611	1
8p-Amp	Del_6q21	0.611	1
Amp_8q24.21	Del_16q24.3	0.611	1
Amp_12q15	Del_16q23.1	0.611	1
CCNA1	9q-Del	0.612	1
CDC42BPA	Amp_1q21.3	0.612	1
CTNNB1	Del_5q31.3	0.612	1
EZH2	9q-Del	0.612	1
GLI1	9q-Del	0.612	1
IDH1	Del_6q26	0.612	1
KRT73	9q-Del	0.612	1
KRT73	Amp_1q21.3	0.612	1
MAP2K1	Del_5q31.3	0.612	1
NUP214	Del_6q26	0.612	1
RIPK4	Amp_1q21.3	0.612	1
C10orf54	USP9X	0.613	1
C15orf23	11p-Del	0.613	1
C7orf58	Del_1p22.1	0.613	1
CDK4	USP9X	0.613	1
DSG3	GUCY2F	0.613	1
GUCY2F	11p-Del	0.613	1
KRTAP5-10	Del_10q21.1	0.613	1
MPP7	14q-Del	0.613	1
NUDT11	OR4S2	0.613	1
NUDT11	USP9X	0.613	1
S100A8	USP9X	0.613	1
XIRP2	Del_4p16.3	0.613	1
Amp_17q25.3	Del_5q12.1	0.613	1
C7orf58	Amp_7q34	0.614	1
C7orf58	Del_9p21.3	0.614	1
COL3A1	Amp_7q34	0.614	1
CYP3A5	Del_10q21.1	0.614	1
KEL	NRAS	0.614	1
KRTAP5-10	NF1	0.614	1
KRTAP5-10	Del_15q21.1	0.614	1
NF1	SLC27A5	0.614	1
NF1	6q-Del	0.614	1
NRAS	Del_4q34.3	0.614	1
SLC27A5	Del_15q21.1	0.614	1
ZNF780B	Del_15q21.1	0.614	1
Amp_1q44	Amp_12q14.1	0.614	1
Amp_1q44	Del_16p13.3	0.614	1
BRAF	CDC42BPA	0.615	1
EPHA7	Del_Xp21.1	0.615	1
MYO16	Del_Xp21.1	0.615	1
SELP	Del_Xp21.1	0.615	1
SLC38A4	Del_Xp21.1	0.615	1
TRERF1	5q-Del	0.615	1
BTK	NGF	0.616	1
BTK	OR6C74	0.616	1
BTK	RB1	0.616	1
C10orf28	Del_10q21.1	0.616	1
C15orf23	DDX3X	0.616	1
C15orf23	LGR6	0.616	1
C15orf23	PPP6C	0.616	1
C15orf23	Amp_6q12	0.616	1
CBL	IDH1	0.616	1
CBL	ZFX	0.616	1
CBL	Amp_4q12	0.616	1
CBL	Amp_12q15	0.616	1
CBL	Del_14q23.3	0.616	1
CBL	Del_16q12.1	0.616	1
CPA3	13q-Amp	0.616	1
CYP3A4	13q-Amp	0.616	1
CYP3A4	11q-Del	0.616	1
DDX3X	PARM1	0.616	1
EMG1	Del_10q21.1	0.616	1
IDH1	OR6C74	0.616	1
MAN1A1	NGF	0.616	1
NGF	NUP214	0.616	1
NGF	Amp_4q12	0.616	1
NGF	Del_14q23.3	0.616	1
NGF	Del_16q12.1	0.616	1
NUP214	RB1	0.616	1
OR6C74	Del_14q23.3	0.616	1
PARM1	Amp_6q12	0.616	1
PPP6C	11q-Del	0.616	1
RAC1	11q-Del	0.616	1
RB1	RPTN	0.616	1
RB1	ZFX	0.616	1
RB1	Amp_4q12	0.616	1
RB1	Amp_12q15	0.616	1
RQCD1	ZFX	0.616	1
RQCD1	Amp_4q12	0.616	1
11q-Del	Amp_6q12	0.616	1
CTNNB1	17p-Del	0.617	1
HRAS	Del_16q23.1	0.617	1
KCND2	Del_15q21.1	0.617	1
KYNU	17p-Del	0.617	1
KYNU	Amp_5p15.33	0.617	1
MPP7	Amp_6q12	0.617	1
MYO16	6p-Amp	0.617	1
NBPF1	7p-Amp	0.617	1
PPP6C	Amp_17q25.3	0.617	1
PPP6C	Del_4p16.3	0.617	1
TPTE	20p-Amp	0.617	1
TPTE	Del_2q37.3	0.617	1
Amp_4q12	Del_11q23.3	0.617	1
Amp_6q12	Del_4p16.3	0.617	1
ALPK2	NUDT11	0.618	1
C10orf54	Amp_20q13.33	0.618	1
C10orf54	Amp_22q13.2	0.618	1
CDK4	Amp_20q13.33	0.618	1
CDK4	Amp_22q13.2	0.618	1
KCND2	Del_6q21	0.618	1
MYO3B	Del_16q24.3	0.618	1
OXA1L	Amp_20q13.33	0.618	1
RELN	7p-Amp	0.618	1
S100A8	Amp_20q13.33	0.618	1
S100A8	Amp_22q13.2	0.618	1
TPTE	20q-Amp	0.618	1
ALPK2	PTEN	0.619	1
ALPK2	22q-Amp	0.619	1
C10orf28	PARM1	0.619	1
C15orf23	EMG1	0.619	1
COL3A1	Amp_7p22.1	0.619	1
EMG1	GUCY2F	0.619	1
EPHA4	Amp_12q14.1	0.619	1
EPHA6	Del_16q23.1	0.619	1
HSD11B1	NBPF1	0.619	1
HSD11B1	18p-Del	0.619	1
HSD11B1	Del_2q37.3	0.619	1
NAP1L2	7q-Amp	0.619	1
NAP1L2	Amp_20q13.33	0.619	1
PTEN	Amp_20q13.33	0.619	1
STK19	Del_2q37.3	0.619	1
THSD7B	Del_5q12.1	0.619	1
TP63	10p-Del	0.619	1
Amp_11q13.3	Del_16p13.3	0.619	1
APCS	FRMPD4	0.62	1
ATP5F1	Amp_13q31.3	0.62	1
CCK	USP17L2	0.62	1
CDKN2A	Del_16q12.1	0.62	1
CTNNA3	9q-Del	0.62	1
CYP3A5	MYO3B	0.62	1
FAM58A	USP17L2	0.62	1
FAM58A	Amp_13q31.3	0.62	1
GNAQ	Amp_13q31.3	0.62	1
KRAS	USP17L2	0.62	1
RPTN	9p-Del	0.62	1
8q-Amp	17p-Del	0.62	1
OR6C74	Del_9p21.3	0.621	1
THSD7B	Del_Xp21.1	0.621	1
CNTN5	9q-Del	0.622	1
COL3A1	11p-Del	0.622	1
EPHA4	Amp_6p24.3	0.622	1
TTN	Amp_12q15	0.622	1
Amp_5p15.33	Del_16q23.1	0.622	1
BTK	CAMTA1	0.623	1
C7orf58	Del_15q13.3	0.623	1
CAMTA1	Amp_12q15	0.623	1
CCNA1	DMC1	0.623	1
CCNA1	GML	0.623	1
CDC42BPA	DMC1	0.623	1
CDC42BPA	6q-Del	0.623	1
CTNNA3	Amp_3p13	0.623	1
DMC1	EZH2	0.623	1
DMC1	KIT	0.623	1
EPHA6	7p-Amp	0.623	1
EZH2	6q-Del	0.623	1
FLT1	22q-Amp	0.623	1
GML	KRT73	0.623	1
GML	16q-Del	0.623	1
KEL	PTEN	0.623	1
MAN1A1	PTEN	0.623	1
NAP1L2	Amp_4q12	0.623	1
NAP1L2	Del_4q34.3	0.623	1
NUP214	PTEN	0.623	1
OR4S2	10p-Del	0.623	1
RIPK4	6q-Del	0.623	1
ZFX	22q-Amp	0.623	1
1q-Amp	Amp_4q12	0.623	1
1q-Amp	Amp_12q15	0.623	1
22q-Amp	Amp_12q15	0.623	1
22q-Amp	Del_1p36.31	0.623	1
8q-Amp	Amp_12q14.1	0.623	1
Amp_3p13	Del_15q13.3	0.623	1
C10orf28	EPHA6	0.624	1
C15orf23	Amp_1q21.3	0.624	1
GUCY2F	9q-Del	0.624	1
HRAS	Del_14q23.3	0.624	1
22q-Amp	Del_10q21.1	0.624	1
10q-Del	Amp_5p15.33	0.624	1
BRAF	ZNF780B	0.625	1
FLT1	20q-Amp	0.625	1
FLT1	Amp_5p15.33	0.625	1
TP53	Amp_3p13	0.625	1
DDX3X	Amp_7p22.1	0.626	1
RAC1	Amp_7p22.1	0.626	1
1q-Amp	Del_3q13.31	0.626	1
APCS	SLC27A5	0.627	1
BTK	Del_14q23.3	0.627	1
BTK	Del_16q12.1	0.627	1
CTNNA3	6p-Del	0.627	1
CYP3A5	SLC27A5	0.627	1
EPHA6	Amp_13q31.3	0.627	1
IDH1	RPTN	0.627	1
IDH1	Del_14q23.3	0.627	1
IGF1R	SLC27A5	0.627	1
RPTN	ZFX	0.627	1
SLC27A5	SYK	0.627	1
USH2A	Del_12q23.3	0.627	1
ZFX	Del_16q12.1	0.627	1
5q-Del	Del_16p13.3	0.627	1
6p-Del	Amp_3p13	0.627	1
ARID2	OR4S2	0.628	1
KRTAP5-10	Del_5q12.1	0.628	1
MYO3B	11q-Del	0.628	1
OR4S2	14q-Del	0.628	1
SLC27A5	14q-Del	0.628	1
SLC27A5	Del_5q12.1	0.628	1
USP9X	Del_5q12.1	0.628	1
ZNF780B	Del_5q12.1	0.628	1
ANO4	NUDT11	0.629	1
CDKN2A	NGF	0.629	1
CDKN2A	OR6C74	0.629	1
CDKN2A	5q-Del	0.629	1
CNTN5	Del_9p23	0.629	1
GML	Del_5q31.3	0.629	1
RELN	8q-Amp	0.629	1
13q-Amp	Amp_22q13.2	0.629	1
C15orf23	SELP	0.63	1
EPHA7	13q-Amp	0.63	1
EZH2	Del_11q23.3	0.63	1
GLI1	Del_11q23.3	0.63	1
KCND2	7p-Amp	0.63	1
KIT	Del_11q23.3	0.63	1
POTEG	Del_16q23.1	0.63	1
RELN	Amp_17q25.3	0.63	1
SLC38A4	13q-Amp	0.63	1
APC	NRAS	0.631	1
C10orf54	CTNNB1	0.631	1
C10orf54	KYNU	0.631	1
C10orf54	MAP2K1	0.631	1
C10orf54	Amp_15q26.2	0.631	1
CDK4	CTNNB1	0.631	1
CDK4	MAP2K1	0.631	1
CDK4	Amp_15q26.2	0.631	1
CTNNB1	NUDT11	0.631	1
CTNNB1	Del_10q23.31	0.631	1
CYP3A4	7q-Amp	0.631	1
KYNU	NUDT11	0.631	1
KYNU	PTPN11	0.631	1
MAP2K1	OXA1L	0.631	1
MYO16	20p-Amp	0.631	1
MYO3B	20q-Amp	0.631	1
OXA1L	Amp_15q26.2	0.631	1
PTPN11	Amp_15q26.2	0.631	1
S100A8	Amp_15q26.2	0.631	1
ALPK2	11p-Del	0.632	1
EMG1	Del_10p15.3	0.632	1
EPHA6	Del_2q37.3	0.632	1
FRMPD4	Del_10q23.31	0.632	1
KRTAP5-10	Del_10p15.3	0.632	1
NGF	10q-Del	0.632	1
PTEN	22q-Amp	0.632	1
SLC27A5	Del_10p15.3	0.632	1
SLC38A4	1q-Amp	0.632	1
ANO4	Del_5q12.1	0.633	1
APC	Del_3q13.31	0.633	1
APCS	TP53	0.633	1
APCS	11p-Del	0.633	1
C7orf58	Del_19p13.3	0.633	1
CTNNB1	Del_15q13.3	0.633	1
KYNU	Amp_1p12	0.633	1
PDGFRA	Del_19p13.3	0.633	1
PTPN22	Del_19p13.3	0.633	1
Amp_1p12	Amp_15q26.2	0.633	1
Amp_8q24.21	Del_5q31.3	0.633	1
Amp_15q26.2	Del_15q13.3	0.633	1
Del_5p15.31	Del_19p13.3	0.633	1
ATP5F1	6p-Del	0.634	1
ATP5F1	Amp_11q13.3	0.634	1
C7orf58	9q-Del	0.634	1
CCK	EPHA4	0.634	1
CCK	6p-Del	0.634	1
CCK	Amp_11q13.3	0.634	1
COL3A1	Del_6q21	0.634	1
EPHA4	FAM58A	0.634	1
EZH2	Amp_8q24.21	0.634	1
FAM58A	Amp_11q13.3	0.634	1
ACSBG1	Del_10p15.3	0.635	1
APCS	Del_10p15.3	0.635	1
C10orf28	Amp_12q14.1	0.635	1
C10orf28	Del_9p23	0.635	1
C10orf28	Del_16p13.3	0.635	1
CYP3A5	Del_10p15.3	0.635	1
EMG1	Del_16p13.3	0.635	1
IGF1R	Del_10p15.3	0.635	1
MSTN	Del_6q26	0.635	1
SLC27A5	Del_6q26	0.635	1
TPTE	Del_5q31.3	0.635	1
ZNF780B	Del_6q26	0.635	1
Amp_22q13.2	Del_16q12.1	0.635	1
BTK	11q-Del	0.636	1
CAMTA1	Del_5q31.3	0.636	1
COL3A1	IDH1	0.636	1
COL3A1	Amp_12q15	0.636	1
DSG3	Amp_1q21.3	0.636	1
MYO3B	Del_11q23.3	0.636	1
PPP6C	10q-Del	0.636	1
TRERF1	Amp_1q21.3	0.636	1
11q-Del	Amp_12q15	0.636	1
Amp_7q34	Amp_12q15	0.636	1
APC	16q-Del	0.637	1
APCS	Del_12q23.3	0.637	1
APCS	Del_13q34	0.637	1
CBL	HSD11B1	0.637	1
CYP3A5	Del_6q21	0.637	1
CYP3A5	Del_12q23.3	0.637	1
DDX3X	10p-Del	0.637	1
DSG3	Del_3q13.31	0.637	1
EPHA6	Amp_17q25.3	0.637	1
FLT1	Amp_17q25.3	0.637	1
FLT1	Del_4p16.3	0.637	1
HSD11B1	NGF	0.637	1
HSD11B1	RB1	0.637	1
HSD11B1	8p-Amp	0.637	1
HSD11B1	Del_5p15.31	0.637	1
IGF1R	Del_13q34	0.637	1
KCND2	LGR6	0.637	1
PDGFRA	16q-Del	0.637	1
PPP6C	10p-Del	0.637	1
RB1	STK19	0.637	1
RELN	Amp_7q34	0.637	1
STK19	TRERF1	0.637	1
STK19	8p-Amp	0.637	1
TP53	Del_3q13.31	0.637	1
TTN	Amp_1q21.3	0.637	1
7q-Amp	16q-Del	0.637	1
8p-Amp	16q-Del	0.637	1
ATP5F1	1q-Amp	0.638	1
CTNNB1	Amp_7p22.1	0.638	1
DDX3X	Del_9p23	0.638	1
DMC1	SELP	0.638	1
GML	SELP	0.638	1
USH2A	Del_5q12.1	0.638	1
BRAF	CDK4	0.639	1
BRAF	NUDT11	0.639	1
BRAF	PTPN11	0.639	1
BRAF	S100A8	0.639	1
CDKN2A	Amp_6p24.3	0.639	1
EPHA4	Del_16q12.1	0.639	1
MYO16	10p-Del	0.639	1
Amp_11q13.3	Del_16q12.1	0.639	1
Amp_15q26.2	Del_10p15.3	0.639	1
C10orf54	Amp_7q34	0.64	1
CDK4	Amp_7q34	0.64	1
EPHA7	Del_16q23.1	0.64	1
FLT1	Amp_20q13.33	0.64	1
HRAS	MLL	0.64	1
HRAS	20q-Amp	0.64	1
HRAS	17p-Del	0.64	1
HRAS	Amp_5p15.33	0.64	1
MLL	Amp_7q34	0.64	1
OXA1L	Amp_7q34	0.64	1
PTPN11	Amp_7q34	0.64	1
RQCD1	XIRP2	0.64	1
S100A8	Amp_7q34	0.64	1
SELP	Del_16q23.1	0.64	1
USP17L2	Amp_5p15.33	0.64	1
1q-Amp	Del_14q23.3	0.64	1
1q-Amp	Del_16q12.1	0.64	1
Amp_20q13.33	Del_1p36.31	0.64	1
BRAF	5q-Del	0.641	1
CBL	MLL	0.641	1
CBL	17p-Del	0.641	1
COL3A1	Del_15q21.1	0.641	1
FLT1	SLC27A5	0.641	1
HSD11B1	6p-Amp	0.641	1
KRTAP5-10	Del_1p36.31	0.641	1
MLL	NGF	0.641	1
MSTN	Del_4q34.3	0.641	1
NF1	Amp_1q44	0.641	1
OR6C74	17p-Del	0.641	1
OR6C74	Amp_5p15.33	0.641	1
PDGFRA	9p-Del	0.641	1
RB1	20q-Amp	0.641	1
RB1	17p-Del	0.641	1
RB1	Amp_5p15.33	0.641	1
RQCD1	20q-Amp	0.641	1
RQCD1	17p-Del	0.641	1
RQCD1	Amp_5p15.33	0.641	1
STK19	6p-Amp	0.641	1
ZNF780B	Del_1p36.31	0.641	1
Amp_1q44	Del_15q21.1	0.641	1
Amp_13q31.3	Del_12q23.3	0.641	1
Amp_13q31.3	Del_13q34	0.641	1
CCNA1	Amp_3p13	0.642	1
CDC42BPA	Amp_3p13	0.642	1
CDKN2A	IDH1	0.642	1
CDKN2A	Amp_12q15	0.642	1
EZH2	Amp_3p13	0.642	1
HSD11B1	Amp_6p24.3	0.642	1
BTK	Del_3q13.31	0.643	1
BTK	Del_19p13.3	0.643	1
C10orf54	Del_6q21	0.643	1
CPA3	Del_16p13.3	0.643	1
CYP3A4	Del_16p13.3	0.643	1
DDX3X	Amp_12q14.1	0.643	1
DDX3X	Del_16p13.3	0.643	1
IDH1	Del_19p13.3	0.643	1
LGR6	Del_16p13.3	0.643	1
MAN1A1	Del_3q13.31	0.643	1
MAN1A1	Del_19p13.3	0.643	1
NUP214	Del_3q13.31	0.643	1
PDGFRA	6p-Amp	0.643	1
PTPN22	Del_11q23.3	0.643	1
RAC1	Amp_12q14.1	0.643	1
RAC1	Del_16p13.3	0.643	1
SLC9A11	Del_5p15.31	0.643	1
ZFX	Del_3q13.31	0.643	1
6p-Amp	Del_5p15.31	0.643	1
16q-Del	Amp_8q24.21	0.643	1
Amp_12q15	Del_3q13.31	0.643	1
PARM1	Del_10p15.3	0.644	1
CAMTA1	5q-Del	0.645	1
CTNNA3	Del_Xp21.1	0.645	1
OR4S2	Del_4q34.3	0.645	1
22q-Amp	5q-Del	0.645	1
16q-Del	Amp_12q14.1	0.645	1
APCS	Amp_20q13.33	0.646	1
APCS	Amp_22q13.2	0.646	1
CYP3A5	Amp_22q13.2	0.646	1
IGF1R	Amp_22q13.2	0.646	1
SYK	Amp_22q13.2	0.646	1
C15orf23	1q-Amp	0.647	1
CPA3	Del_5q31.3	0.647	1
FAM58A	11q-Del	0.647	1
HRAS	Amp_1p12	0.647	1
HRAS	Del_15q13.3	0.647	1
KRAS	11q-Del	0.647	1
OR4S2	Amp_11q13.3	0.647	1
RPTN	Del_9p23	0.647	1
SLC9A11	Del_4p16.3	0.647	1
SLC9A11	Del_5q31.3	0.647	1
TP53	Del_10q26.3	0.647	1
USP9X	Amp_11q13.3	0.647	1
6p-Amp	Del_1p22.1	0.647	1
CNTN5	USP9X	0.648	1
DSG3	10q-Del	0.648	1
DSG3	5q-Del	0.648	1
MAN1A1	Amp_1q21.3	0.648	1
TP53	10q-Del	0.648	1
ZFX	Amp_1q21.3	0.648	1
9q-Del	Amp_4q12	0.648	1
ATP5F1	DDX3X	0.649	1
ATP5F1	Amp_6q12	0.649	1
C10orf54	Amp_1q21.3	0.649	1
C7orf58	NF1	0.649	1
CBL	Del_11q23.3	0.649	1
CCK	CPA3	0.649	1
CCK	CYP3A4	0.649	1
CCK	RAC1	0.649	1
CCK	Amp_6q12	0.649	1
CNTN5	CYP3A5	0.649	1
CPA3	FAM58A	0.649	1
CPA3	GNAQ	0.649	1
CPA3	KRAS	0.649	1
CTNNB1	Del_8p23.3	0.649	1
CTNNB1	Del_15q21.1	0.649	1
CYP3A4	FAM58A	0.649	1
DDX3X	FAM58A	0.649	1
DDX3X	GNAQ	0.649	1
FAM58A	PPP6C	0.649	1
FRMPD4	Amp_11q13.3	0.649	1
GNAQ	RAC1	0.649	1
KRAS	LGR6	0.649	1
KRAS	PPP6C	0.649	1
NF1	Amp_15q26.2	0.649	1
NF1	Del_5q12.1	0.649	1
PPP6C	XIRP2	0.649	1
PTPN11	Amp_1q21.3	0.649	1
XIRP2	Amp_6q12	0.649	1
7p-Amp	Amp_13q31.3	0.649	1
Del_5q12.1	Del_8p23.3	0.649	1
BTK	C10orf54	0.65	1
BTK	CDK4	0.65	1
BTK	NUDT11	0.65	1
BTK	7q-Amp	0.65	1
C10orf54	IDH1	0.65	1
C10orf54	Amp_4q12	0.65	1
C10orf54	Amp_12q15	0.65	1
C15orf23	Del_1p22.1	0.65	1
C15orf23	Del_4p16.3	0.65	1
CDK4	IDH1	0.65	1
CDK4	MAN1A1	0.65	1
CDK4	ZFX	0.65	1
CDK4	Amp_12q15	0.65	1
CDKN2A	Del_6q26	0.65	1
GUCY2F	Amp_17q25.3	0.65	1
GUCY2F	Del_1p22.1	0.65	1
IDH1	NUDT11	0.65	1
IDH1	OXA1L	0.65	1
IDH1	PTPN11	0.65	1
IDH1	S100A8	0.65	1
KEL	Del_15q13.3	0.65	1
MAN1A1	PTPN11	0.65	1
MAN1A1	S100A8	0.65	1
MPP7	13q-Amp	0.65	1
NUDT11	ZFX	0.65	1
NUDT11	Amp_4q12	0.65	1
NUDT11	Amp_12q15	0.65	1
OXA1L	ZFX	0.65	1
OXA1L	Amp_4q12	0.65	1
PTPN11	Amp_4q12	0.65	1
PTPN11	Amp_12q15	0.65	1
S100A8	Amp_4q12	0.65	1
S100A8	Amp_12q15	0.65	1
13q-Amp	Del_1p22.1	0.65	1
7q-Amp	Amp_4q12	0.65	1
7q-Amp	Amp_12q15	0.65	1
Amp_1p12	Del_16q24.3	0.65	1
Amp_20q13.33	Del_10p15.3	0.65	1
C10orf54	6p-Amp	0.651	1
CCNA1	KRTAP5-10	0.651	1
CDC42BPA	SLC27A5	0.651	1
CDK4	6p-Amp	0.651	1
EZH2	KRTAP5-10	0.651	1
EZH2	MSTN	0.651	1
EZH2	SLC27A5	0.651	1
KCND2	Del_12q23.3	0.651	1
KRT73	SLC27A5	0.651	1
MSTN	RIPK4	0.651	1
NRAS	ZNF780B	0.651	1
OR4S2	10q-Del	0.651	1
POTEG	Del_14q23.3	0.651	1
POTEG	Del_16q12.1	0.651	1
PTPN11	6p-Amp	0.651	1
RIPK4	SLC27A5	0.651	1
TP63	8q-Amp	0.651	1
8q-Amp	Del_16q24.3	0.651	1
Amp_1p12	Del_5q31.3	0.651	1
Del_2q37.3	Del_14q23.3	0.651	1
ALPK2	Del_10q23.31	0.652	1
C10orf28	USP9X	0.652	1
CBL	Del_9p23	0.652	1
CNTN5	22q-Amp	0.652	1
EMG1	USP9X	0.652	1
MYO16	11q-Del	0.652	1
NGF	Del_9p23	0.652	1
NRAS	Del_Xp21.1	0.652	1
OR6C74	Del_9p23	0.652	1
PTPN22	6q-Del	0.652	1
RELN	18p-Del	0.652	1
RQCD1	Del_9p23	0.652	1
C10orf28	Del_16q24.3	0.653	1
DMC1	Del_1p22.1	0.653	1
EMG1	TP63	0.653	1
EMG1	8q-Amp	0.653	1
FRMPD4	Del_15q13.3	0.653	1
GML	Del_4p16.3	0.653	1
NF1	6p-Amp	0.653	1
NGF	Amp_1p12	0.653	1
OR6C74	Amp_1p12	0.653	1
RB1	Amp_1p12	0.653	1
USP17L2	Amp_15q26.2	0.653	1
Amp_13q31.3	Del_9p23	0.653	1
ACSBG1	Del_2q37.3	0.654	1
APCS	20p-Amp	0.654	1
APCS	Del_2q37.3	0.654	1
CTNNB1	Del_10q26.3	0.654	1
CYP3A5	FGFR2	0.654	1
CYP3A5	20p-Amp	0.654	1
CYP3A5	18p-Del	0.654	1
CYP3A5	Del_2q37.3	0.654	1
DSG3	Amp_12q14.1	0.654	1
FGFR2	Amp_17q25.3	0.654	1
FLT1	Del_19p13.3	0.654	1
IGF1R	POTEG	0.654	1
IGF1R	20p-Amp	0.654	1
KEL	Del_19p13.3	0.654	1
MPP7	20p-Amp	0.654	1
NBPF1	Amp_17q25.3	0.654	1
PDGFRA	Del_9p21.3	0.654	1
POTEG	Del_4p16.3	0.654	1
SYK	18p-Del	0.654	1
SYK	Del_2q37.3	0.654	1
20p-Amp	Amp_17q25.3	0.654	1
7q-Amp	Del_16q23.1	0.654	1
Amp_20q13.33	Del_9p21.3	0.654	1
CCK	7q-Amp	0.655	1
EPHA6	Del_9p23	0.655	1
FRMPD4	Del_Xp21.1	0.655	1
HRAS	Del_15q21.1	0.655	1
MYO3B	Del_Xp21.1	0.655	1
NF1	Del_6q21	0.655	1
SLC27A5	5q-Del	0.655	1
Amp_7q34	Del_1p36.31	0.655	1
ACSBG1	NRAS	0.656	1
ALPK2	Del_3q13.31	0.656	1
APCS	NRAS	0.656	1
CCNA1	Amp_7p22.1	0.656	1
HSD11B1	PTEN	0.656	1
KIT	Amp_7p22.1	0.656	1
RIPK4	Amp_7p22.1	0.656	1
ACSBG1	9p-Del	0.657	1
APCS	9p-Del	0.657	1
BRAF	FGFR2	0.657	1
CDKN2A	6p-Del	0.657	1
ACSBG1	CBL	0.658	1
ACSBG1	RB1	0.658	1
ACSBG1	RQCD1	0.658	1
APCS	CBL	0.658	1
APCS	NGF	0.658	1
APCS	RB1	0.658	1
APCS	RQCD1	0.658	1
ATP5F1	BRAF	0.658	1
BRAF	FAM58A	0.658	1
BTK	20q-Amp	0.658	1
BTK	17p-Del	0.658	1
C10orf54	6q-Del	0.658	1
CAMTA1	Del_3q13.31	0.658	1
CAMTA1	Del_19p13.3	0.658	1
CBL	IGF1R	0.658	1
CBL	SYK	0.658	1
CCNA1	Del_16q24.3	0.658	1
CTNNA3	PPP6C	0.658	1
CYP3A4	Amp_3p13	0.658	1
CYP3A5	RB1	0.658	1
CYP3A5	RQCD1	0.658	1
DDX3X	Amp_3p13	0.658	1
DDX3X	Del_16q23.1	0.658	1
EZH2	MYO3B	0.658	1
EZH2	8q-Amp	0.658	1
EZH2	Del_16q24.3	0.658	1
FRMPD4	GLI1	0.658	1
GLI1	Del_16q24.3	0.658	1
IDH1	MLL	0.658	1
IDH1	17p-Del	0.658	1
IGF1R	RB1	0.658	1
KIT	TP63	0.658	1
KRT73	Del_16q24.3	0.658	1
MSTN	1q-Amp	0.658	1
NUP214	20q-Amp	0.658	1
NUP214	Amp_5p15.33	0.658	1
PTEN	Del_19p13.3	0.658	1
RAC1	Del_16q23.1	0.658	1
RB1	SYK	0.658	1
RQCD1	SYK	0.658	1
SLC27A5	1q-Amp	0.658	1
ALPK2	Amp_20q13.33	0.659	1
APC	7p-Amp	0.659	1
CDK4	9p-Del	0.659	1
DCLK3	Amp_6p24.3	0.659	1
MYO16	Del_5p15.31	0.659	1
NBPF1	Amp_6p24.3	0.659	1
SLC38A4	Del_5p15.31	0.659	1
SLC9A11	Del_9p23	0.659	1
7q-Amp	Del_19p13.3	0.659	1
Amp_1q21.3	Amp_7q34	0.659	1
ANO4	1q-Amp	0.66	1
KEL	9p-Del	0.66	1
MAN1A1	6q-Del	0.66	1
C15orf23	Del_9p21.3	0.661	1
MPP7	5q-Del	0.661	1
1q-Amp	Del_10q23.31	0.661	1
20q-Amp	Del_12q23.3	0.661	1
Amp_5p15.33	Del_12q23.3	0.661	1
ANO4	Amp_7p22.1	0.662	1
BRAF	NAP1L2	0.662	1
CDK4	Del_16q23.1	0.662	1
COL3A1	13q-Amp	0.662	1
NF1	7q-Amp	0.662	1
PARM1	11q-Del	0.662	1
PTPN11	Del_16q23.1	0.662	1
RAC1	Del_11q23.3	0.662	1
S100A8	Del_16q23.1	0.662	1
ATP5F1	13q-Amp	0.663	1
BTK	Del_5q31.3	0.663	1
C15orf23	KRAS	0.663	1
CCK	GUCY2F	0.663	1
CCK	PARM1	0.663	1
EPHA7	Del_14q23.3	0.663	1
FAM58A	GUCY2F	0.663	1
FAM58A	13q-Amp	0.663	1
GNAQ	PARM1	0.663	1
GNAQ	13q-Amp	0.663	1
GUCY2F	KRAS	0.663	1
HRAS	14q-Del	0.663	1
HRAS	Del_5q12.1	0.663	1
KRAS	PARM1	0.663	1
MAP2K1	NRAS	0.663	1
MYO16	Del_14q23.3	0.663	1
OR4S2	5q-Del	0.663	1
PDGFRA	Del_16q23.1	0.663	1
USP9X	5q-Del	0.663	1
EPHA7	Del_16p13.3	0.664	1
GNAQ	Del_5q31.3	0.664	1
KCND2	Del_1p36.31	0.664	1
KCND2	Del_10p15.3	0.664	1
MYO16	Amp_12q14.1	0.664	1
MYO16	Del_16p13.3	0.664	1
NBPF1	Amp_13q31.3	0.664	1
SELP	Del_16p13.3	0.664	1
SLC38A4	Amp_12q14.1	0.664	1
TPTE	Del_9p23	0.664	1
7q-Amp	Del_5q31.3	0.664	1
14q-Del	Amp_6p24.3	0.664	1
18p-Del	Amp_13q31.3	0.664	1
COL3A1	6q-Del	0.665	1
GNAQ	10q-Del	0.665	1
Del_13q34	Del_Xp21.1	0.665	1
ARID2	KYNU	0.666	1
CAMTA1	16q-Del	0.666	1
CTNNB1	14q-Del	0.666	1
KCND2	Del_10q23.31	0.666	1
MAP2K1	Del_5q12.1	0.666	1
NF1	RQCD1	0.666	1
RB1	Del_8p23.3	0.666	1
RELN	10p-Del	0.666	1
RQCD1	Del_8p23.3	0.666	1
SLC38A4	6q-Del	0.666	1
ACSBG1	Del_10q23.31	0.667	1
ARID2	Del_11q23.3	0.667	1
CDK4	Del_10q23.31	0.667	1
GML	Del_9p23	0.667	1
GUCY2F	Amp_12q14.1	0.667	1
GUCY2F	Del_16p13.3	0.667	1
NUDT11	Amp_8q24.21	0.667	1
NUDT11	Del_10q23.31	0.667	1
OXA1L	Del_10q23.31	0.667	1
PARM1	Amp_12q14.1	0.667	1
PARM1	Del_16p13.3	0.667	1
PTPN11	Amp_8q24.21	0.667	1
TTN	Amp_7q34	0.667	1
USP9X	Del_16q24.3	0.667	1
CAMTA1	Amp_7q34	0.668	1
EZH2	Del_6q26	0.668	1
GLI1	Del_6q26	0.668	1
KCND2	Del_6q26	0.668	1
KRT73	Del_6q26	0.668	1
PTPN22	Amp_8q24.21	0.668	1
RIPK4	Del_6q26	0.668	1
SLC27A5	11q-Del	0.668	1
1q-Amp	Del_4p16.3	0.668	1
C10orf28	CTNNB1	0.669	1
C10orf28	Amp_15q26.2	0.669	1
CPA3	OR4S2	0.669	1
CTNNB1	EMG1	0.669	1
DDX3X	OR4S2	0.669	1
EMG1	KYNU	0.669	1
EMG1	MAP2K1	0.669	1
EMG1	Amp_15q26.2	0.669	1
EMG1	Del_9p21.3	0.669	1
EPHA4	Del_10q26.3	0.669	1
KRTAP5-10	16q-Del	0.669	1
MSTN	16q-Del	0.669	1
OR4S2	RAC1	0.669	1
RAC1	USP9X	0.669	1
STK19	10q-Del	0.669	1
ZNF780B	16q-Del	0.669	1
Amp_17q25.3	Del_16q23.1	0.669	1
C10orf54	HSD11B1	0.67	1
C10orf54	STK19	0.67	1
CDK4	HSD11B1	0.67	1
EPHA4	Del_12q23.3	0.67	1
EPHA4	Del_13q34	0.67	1
HSD11B1	NUDT11	0.67	1
HSD11B1	Del_14q23.3	0.67	1
HSD11B1	Del_16q12.1	0.67	1
NUDT11	STK19	0.67	1
USH2A	7p-Amp	0.67	1
22q-Amp	10q-Del	0.67	1
Amp_11q13.3	Del_12q23.3	0.67	1
ALPK2	Amp_1q21.3	0.671	1
APCS	PTPN22	0.672	1
CYP3A5	TRERF1	0.672	1
CYP3A5	8p-Amp	0.672	1
CYP3A5	Del_5p15.31	0.672	1
GNAQ	XIRP2	0.672	1
IGF1R	8p-Amp	0.672	1
PARM1	Del_6q26	0.672	1
SYK	Del_5p15.31	0.672	1
Amp_4q12	Amp_8q24.21	0.672	1
Amp_7q34	Amp_17q25.3	0.672	1
CDKN2A	17p-Del	0.673	1
CPA3	Del_6q21	0.673	1
DSG3	EMG1	0.673	1
EMG1	TP53	0.673	1
FRMPD4	10p-Del	0.673	1
MAN1A1	Del_15q13.3	0.673	1
NAP1L2	Del_6q21	0.673	1
NRAS	Del_6q26	0.673	1
NUP214	Amp_1p12	0.673	1
NUP214	Del_15q13.3	0.673	1
ZFX	Del_15q13.3	0.673	1
ANO4	Del_19p13.3	0.674	1
C7orf58	Del_5q12.1	0.674	1
CCNA1	Del_13q34	0.674	1
CDC42BPA	Del_12q23.3	0.674	1
CDC42BPA	Del_13q34	0.674	1
COL3A1	Del_5q12.1	0.674	1
COL3A1	Del_9p21.3	0.674	1
EZH2	Del_12q23.3	0.674	1
EZH2	Del_13q34	0.674	1
GLI1	Del_13q34	0.674	1
KRT73	Del_12q23.3	0.674	1
KRT73	Del_13q34	0.674	1
OXA1L	Del_14q23.3	0.674	1
OXA1L	Del_16q12.1	0.674	1
PTPN11	Del_14q23.3	0.674	1
RIPK4	Del_13q34	0.674	1
RPTN	Del_15q13.3	0.674	1
TPTE	Amp_6p24.3	0.674	1
USP9X	Del_11q23.3	0.674	1
CDKN2A	NRAS	0.675	1
CPA3	Del_14q23.3	0.675	1
CTNNB1	Amp_11q13.3	0.675	1
DCLK3	Del_Xp21.1	0.675	1
DDX3X	Del_16q12.1	0.675	1
DMC1	SLC27A5	0.675	1
FGFR2	Del_Xp21.1	0.675	1
FRMPD4	Del_8p23.3	0.675	1
GML	SLC27A5	0.675	1
GML	ZNF780B	0.675	1
HSD11B1	Del_19p13.3	0.675	1
KEL	Del_15q21.1	0.675	1
MLL	Amp_11q13.3	0.675	1
NBPF1	Amp_1q44	0.675	1
NBPF1	Del_Xp21.1	0.675	1
NF1	Del_1p36.31	0.675	1
NF1	Del_4q34.3	0.675	1
POTEG	Del_Xp21.1	0.675	1
PPP6C	Del_14q23.3	0.675	1
STK19	Del_19p13.3	0.675	1
20q-Amp	6p-Del	0.675	1
18p-Del	Del_Xp21.1	0.675	1
Amp_3p13	Amp_6p24.3	0.675	1
Amp_6q12	Del_16q12.1	0.675	1
Amp_11q13.3	Amp_15q26.2	0.675	1
Del_2q37.3	Del_Xp21.1	0.675	1
GUCY2F	7q-Amp	0.676	1
IDH1	Del_6q21	0.676	1
NUP214	Del_6q21	0.676	1
RELN	6p-Amp	0.676	1
RPTN	Del_10q26.3	0.676	1
13q-Amp	7q-Amp	0.676	1
CYP3A5	10p-Del	0.677	1
KCND2	Del_2q37.3	0.677	1
22q-Amp	6p-Amp	0.677	1
Del_8p23.3	Del_16q23.1	0.677	1
ATP5F1	Amp_12q14.1	0.678	1
ATP5F1	Del_16p13.3	0.678	1
C7orf58	CBL	0.678	1
C7orf58	RB1	0.678	1
C7orf58	RQCD1	0.678	1
CBL	14q-Del	0.678	1
CBL	Del_5q12.1	0.678	1
CCK	Amp_12q14.1	0.678	1
CCK	Del_16p13.3	0.678	1
CYP3A4	FRMPD4	0.678	1
DDX3X	FRMPD4	0.678	1
FAM58A	Amp_12q14.1	0.678	1
FAM58A	Del_16p13.3	0.678	1
GNAQ	Amp_12q14.1	0.678	1
GNAQ	Del_16p13.3	0.678	1
GUCY2F	Amp_7p22.1	0.678	1
KIT	Del_9p21.3	0.678	1
KRAS	Del_16p13.3	0.678	1
NF1	Amp_13q31.3	0.678	1
NGF	14q-Del	0.678	1
OR6C74	14q-Del	0.678	1
OR6C74	Del_5q12.1	0.678	1
RB1	14q-Del	0.678	1
RB1	Del_5q12.1	0.678	1
USP17L2	Del_15q21.1	0.678	1
CCK	Del_11q23.3	0.679	1
EZH2	THSD7B	0.679	1
FRMPD4	Amp_20q13.33	0.679	1
HRAS	5q-Del	0.679	1
KIT	THSD7B	0.679	1
KRTAP5-10	7q-Amp	0.679	1
MSTN	7q-Amp	0.679	1
SLC27A5	7q-Amp	0.679	1
TTN	Amp_6q12	0.679	1
USH2A	18p-Del	0.679	1
ZNF780B	7q-Amp	0.679	1
9q-Del	Amp_12q14.1	0.679	1
Amp_1q21.3	Amp_12q14.1	0.679	1
APCS	Del_9p23	0.68	1
ARID2	6p-Amp	0.68	1
CBL	CCNA1	0.68	1
CBL	CDC42BPA	0.68	1
CBL	RIPK4	0.68	1
CCNA1	OR6C74	0.68	1
CCNA1	RB1	0.68	1
CDC42BPA	NGF	0.68	1
EZH2	NGF	0.68	1
EZH2	OR6C74	0.68	1
EZH2	RB1	0.68	1
GLI1	RB1	0.68	1
GLI1	RQCD1	0.68	1
KIT	NGF	0.68	1
KIT	RQCD1	0.68	1
KRT73	NGF	0.68	1
KRT73	RB1	0.68	1
KRT73	RQCD1	0.68	1
NF1	Del_16q24.3	0.68	1
RB1	RIPK4	0.68	1
SYK	Del_9p23	0.68	1
16q-Del	Amp_5p15.33	0.68	1
Amp_3p13	Del_10q21.1	0.68	1
Amp_12q14.1	Del_10q21.1	0.68	1
APC	Amp_17q25.3	0.681	1
PTPN22	Del_4p16.3	0.681	1
8p-Amp	Amp_17q25.3	0.681	1
CDK4	Del_10q26.3	0.682	1
MPP7	Del_16p13.3	0.682	1
MYO16	SLC27A5	0.682	1
NUDT11	Del_10q26.3	0.682	1
OXA1L	Del_10q26.3	0.682	1
SLC27A5	SLC38A4	0.682	1
14q-Del	Amp_1q44	0.682	1
Amp_1p12	Del_12q23.3	0.682	1
Amp_12q14.1	Del_1p22.1	0.682	1
Amp_15q26.2	Del_1p36.31	0.682	1
CAMTA1	NRAS	0.683	1
CBL	7p-Amp	0.683	1
EMG1	Amp_20q13.33	0.683	1
EZH2	TP53	0.683	1
EZH2	11p-Del	0.683	1
IDH1	USH2A	0.683	1
IDH1	USP17L2	0.683	1
NRAS	SLC9A11	0.683	1
PDGFRA	Del_14q23.3	0.683	1
PTEN	Amp_1q21.3	0.683	1
RB1	7p-Amp	0.683	1
RQCD1	TPTE	0.683	1
RQCD1	7p-Amp	0.683	1
USP17L2	Amp_4q12	0.683	1
USP17L2	Amp_12q15	0.683	1
ZFX	Amp_13q31.3	0.683	1
Amp_4q12	Del_10q21.1	0.683	1
Del_5p15.31	Del_14q23.3	0.683	1
Del_5q31.3	Del_8p23.3	0.683	1
Del_5q31.3	Del_15q21.1	0.683	1
APCS	TPTE	0.684	1
CYP3A5	7p-Amp	0.684	1
IGF1R	TPTE	0.684	1
PTEN	XIRP2	0.684	1
PTPN11	Amp_7p22.1	0.684	1
Amp_1q21.3	Del_16q23.1	0.684	1
CDK4	CDKN2A	0.685	1
CDKN2A	MYO16	0.685	1
CDKN2A	NUDT11	0.685	1
PDGFRA	Del_Xp21.1	0.685	1
PTPN22	Del_Xp21.1	0.685	1
TRERF1	Del_Xp21.1	0.685	1
TTN	Del_13q34	0.685	1
8p-Amp	Del_Xp21.1	0.685	1
APCS	Del_10q26.3	0.686	1
IGF1R	Del_10q26.3	0.686	1
MSTN	Del_6q21	0.686	1
SLC27A5	Del_6q21	0.686	1
USP17L2	Del_5p15.31	0.686	1
ZNF780B	Del_6q21	0.686	1
10p-Del	Amp_15q26.2	0.686	1
APCS	6p-Amp	0.687	1
BTK	C10orf28	0.687	1
BTK	EMG1	0.687	1
C10orf28	NUP214	0.687	1
C10orf28	ZFX	0.687	1
C10orf28	Amp_4q12	0.687	1
C10orf28	Amp_12q15	0.687	1
CNTN5	Del_6q26	0.687	1
CYP3A5	6p-Amp	0.687	1
EMG1	MAN1A1	0.687	1
EMG1	NUP214	0.687	1
EMG1	ZFX	0.687	1
EMG1	Amp_4q12	0.687	1
EMG1	Amp_6p24.3	0.687	1
EMG1	Amp_12q15	0.687	1
HRAS	16q-Del	0.687	1
IGF1R	SLC9A11	0.687	1
MPP7	11q-Del	0.687	1
MYO16	PTEN	0.687	1
PTEN	SLC38A4	0.687	1
SELP	22q-Amp	0.687	1
1q-Amp	Del_2q37.3	0.687	1
BRAF	SLC9A11	0.688	1
DCLK3	Del_16q24.3	0.688	1
GUCY2F	Amp_3p13	0.688	1
MAN1A1	Del_15q21.1	0.688	1
NBPF1	8q-Amp	0.688	1
NF1	7p-Amp	0.688	1
NF1	Amp_12q15	0.688	1
NUP214	Del_15q21.1	0.688	1
RELN	6q-Del	0.688	1
ZFX	Del_8p23.3	0.688	1
ZFX	Del_15q21.1	0.688	1
13q-Amp	Amp_3p13	0.688	1
20p-Amp	Del_16q24.3	0.688	1
8q-Amp	Del_2q37.3	0.688	1
Amp_12q15	Del_8p23.3	0.688	1
APCS	PTEN	0.689	1
BRAF	Del_Xp21.1	0.689	1
COL3A1	HSD11B1	0.689	1
CYP3A5	22q-Amp	0.689	1
EZH2	Del_10q21.1	0.689	1
GLI1	Del_10q21.1	0.689	1
HSD11B1	11q-Del	0.689	1
IGF1R	NAP1L2	0.689	1
KRT73	Del_10q21.1	0.689	1
MSTN	Del_5q31.3	0.689	1
SLC27A5	Del_5q31.3	0.689	1
SYK	22q-Amp	0.689	1
TTN	Amp_17q25.3	0.689	1
TTN	Del_4p16.3	0.689	1
ACSBG1	C10orf54	0.69	1
ACSBG1	PTPN11	0.69	1
APCS	C10orf54	0.69	1
APCS	NUDT11	0.69	1
APCS	PTPN11	0.69	1
C10orf54	CYP3A5	0.69	1
C10orf54	IGF1R	0.69	1
C10orf54	SYK	0.69	1
CBL	FLT1	0.69	1
CBL	Del_4q34.3	0.69	1
CDK4	IGF1R	0.69	1
CDK4	SYK	0.69	1
CYP3A5	NUDT11	0.69	1
CYP3A5	OXA1L	0.69	1
CYP3A5	PTPN11	0.69	1
DDX3X	Amp_1q44	0.69	1
FLT1	RQCD1	0.69	1
IGF1R	NUDT11	0.69	1
IGF1R	PTPN11	0.69	1
IGF1R	S100A8	0.69	1
KEL	OR6C74	0.69	1
KEL	RQCD1	0.69	1
MPP7	9q-Del	0.69	1
NGF	Del_1p36.31	0.69	1
NRAS	Del_13q34	0.69	1
OR4S2	Del_9p21.3	0.69	1
RB1	Del_4q34.3	0.69	1
STK19	Del_11q23.3	0.69	1
Amp_1q44	Amp_6q12	0.69	1
BRAF	Del_14q23.3	0.691	1
CCNA1	FGFR2	0.691	1
CCNA1	18p-Del	0.691	1
CDC42BPA	20p-Amp	0.691	1
DCLK3	KIT	0.691	1
DCLK3	20q-Amp	0.691	1
DCLK3	Amp_5p15.33	0.691	1
EPHA7	Del_5q31.3	0.691	1
FGFR2	RIPK4	0.691	1
FGFR2	17p-Del	0.691	1
GLI1	18p-Del	0.691	1
GLI1	Del_2q37.3	0.691	1
GML	6q-Del	0.691	1
KEL	Amp_3p13	0.691	1
KIT	20p-Amp	0.691	1
KIT	18p-Del	0.691	1
KRT73	20p-Amp	0.691	1
MLL	20p-Amp	0.691	1
MPP7	Del_14q23.3	0.691	1
NBPF1	20q-Amp	0.691	1
NGF	THSD7B	0.691	1
PARM1	Del_5q31.3	0.691	1
POTEG	6p-Del	0.691	1
RIPK4	Del_2q37.3	0.691	1
RQCD1	THSD7B	0.691	1
SELP	Del_5q31.3	0.691	1
TP53	Del_10q21.1	0.691	1
20p-Amp	17p-Del	0.691	1
20p-Amp	Amp_11q13.3	0.691	1
20q-Amp	Del_2q37.3	0.691	1
18p-Del	Amp_5p15.33	0.691	1
18p-Del	Amp_11q13.3	0.691	1
6p-Del	Amp_7q34	0.691	1
6p-Del	Del_2q37.3	0.691	1
Amp_7q34	Amp_11q13.3	0.691	1
Amp_12q14.1	Del_16p13.3	0.691	1
Amp_22q13.2	Del_10q26.3	0.691	1
C15orf23	OR4S2	0.692	1
CDKN2A	LGR6	0.692	1
DSG3	Del_13q34	0.692	1
FLT1	6q-Del	0.692	1
GUCY2F	USP9X	0.692	1
PARM1	USP9X	0.692	1
PDGFRA	RELN	0.692	1
RELN	8p-Amp	0.692	1
TP53	Del_13q34	0.692	1
ANO4	EMG1	0.693	1
TTN	Del_4q34.3	0.693	1
1q-Amp	Amp_12q14.1	0.693	1
1q-Amp	Del_16p13.3	0.693	1
CCK	OR4S2	0.694	1
CCK	USP9X	0.694	1
CDKN2A	11q-Del	0.694	1
DSG3	10p-Del	0.694	1
FAM58A	OR4S2	0.694	1
FAM58A	USP9X	0.694	1
KRAS	OR4S2	0.694	1
TP53	10p-Del	0.694	1
Amp_6p24.3	Del_16q23.1	0.694	1
ALPK2	KIT	0.695	1
BRAF	Del_10p15.3	0.695	1
C10orf28	Amp_1q44	0.695	1
CCNA1	Amp_20q13.33	0.695	1
CDC42BPA	Amp_20q13.33	0.695	1
CNTN5	Del_19p13.3	0.695	1
EPHA7	HRAS	0.695	1
GLI1	Amp_22q13.2	0.695	1
HRAS	MYO16	0.695	1
KRT73	Amp_22q13.2	0.695	1
MAN1A1	Amp_7p22.1	0.695	1
PTEN	Del_16q23.1	0.695	1
5q-Del	Amp_7q34	0.695	1
Amp_7p22.1	Amp_12q15	0.695	1
C10orf54	20q-Amp	0.696	1
C10orf54	Amp_5p15.33	0.696	1
CAMTA1	Del_Xp21.1	0.696	1
CDK4	MLL	0.696	1
CDK4	20q-Amp	0.696	1
CPA3	CTNNB1	0.696	1
CPA3	Amp_15q26.2	0.696	1
CTNNB1	LGR6	0.696	1
CTNNB1	RAC1	0.696	1
DDX3X	KYNU	0.696	1
DSG3	Amp_1p12	0.696	1
DSG3	Del_15q13.3	0.696	1
KYNU	RAC1	0.696	1
KYNU	Amp_6q12	0.696	1
LGR6	MAP2K1	0.696	1
MAP2K1	RAC1	0.696	1
MLL	PTPN11	0.696	1
MLL	S100A8	0.696	1
MPP7	SLC27A5	0.696	1
MSTN	Amp_17q25.3	0.696	1
MSTN	Del_1p22.1	0.696	1
MSTN	Del_4p16.3	0.696	1
NAP1L2	Del_Xp21.1	0.696	1
NUDT11	20q-Amp	0.696	1
OXA1L	20q-Amp	0.696	1
PPP6C	Amp_15q26.2	0.696	1
PTEN	Del_Xp21.1	0.696	1
PTPN11	17p-Del	0.696	1
PTPN11	Amp_5p15.33	0.696	1
S100A8	20q-Amp	0.696	1
S100A8	17p-Del	0.696	1
SLC27A5	Amp_17q25.3	0.696	1
ZNF780B	Amp_17q25.3	0.696	1
22q-Amp	Del_Xp21.1	0.696	1
CNTN5	LGR6	0.697	1
CNTN5	Amp_6q12	0.697	1
FRMPD4	14q-Del	0.697	1
KCND2	Del_10q26.3	0.697	1
KRTAP5-10	Amp_6p24.3	0.697	1
RPTN	7p-Amp	0.697	1
USP17L2	14q-Del	0.697	1
USP17L2	Del_5q12.1	0.697	1
9p-Del	Amp_4q12	0.697	1
9p-Del	Amp_12q15	0.697	1
CNTN5	Del_10q23.31	0.698	1
CPA3	Del_13q34	0.698	1
MYO3B	Del_13q34	0.698	1
8q-Amp	Del_1p22.1	0.698	1
Amp_1q44	Amp_5p15.33	0.698	1
Amp_6q12	Del_12q23.3	0.698	1
CTNNB1	5q-Del	0.699	1
STK19	17p-Del	0.699	1
STK19	Amp_5p15.33	0.699	1
5q-Del	Amp_15q26.2	0.699	1
CAMTA1	9p-Del	0.7	1
CBL	USH2A	0.7	1
KRTAP5-10	SLC27A5	0.7	1
MSTN	SLC27A5	0.7	1
NF1	5q-Del	0.7	1
NGF	Del_10q21.1	0.7	1
RB1	USH2A	0.7	1
SYK	Del_16q23.1	0.7	1
Amp_3p13	Del_2q37.3	0.7	1
BRAF	BTK	0.701	1
BRAF	MAN1A1	0.701	1
BRAF	ZFX	0.701	1
CNTN5	KYNU	0.701	1
CNTN5	Amp_15q26.2	0.701	1
Amp_5p15.33	Del_6q26	0.701	1
Amp_22q13.2	Del_5q31.3	0.701	1
GML	XIRP2	0.702	1
BRAF	Del_1p36.31	0.703	1
BTK	6p-Del	0.703	1
CBL	DMC1	0.703	1
DMC1	RB1	0.703	1
DMC1	RQCD1	0.703	1
EPHA4	IDH1	0.703	1
EPHA4	Amp_4q12	0.703	1
EPHA4	Amp_12q15	0.703	1
GML	NGF	0.703	1
GML	OR6C74	0.703	1
GML	RQCD1	0.703	1
HRAS	MPP7	0.703	1
HRAS	Amp_17q25.3	0.703	1
IDH1	Amp_11q13.3	0.703	1
KCND2	Del_5p15.31	0.703	1
KRTAP5-10	9p-Del	0.703	1
MAN1A1	6p-Del	0.703	1
NBPF1	Del_6q21	0.703	1
NRAS	16q-Del	0.703	1
NUP214	Amp_11q13.3	0.703	1
OR6C74	RELN	0.703	1
OR6C74	5q-Del	0.703	1
RB1	5q-Del	0.703	1
16q-Del	Amp_1p12	0.703	1
6p-Del	Amp_4q12	0.703	1
Del_8p23.3	Del_13q34	0.703	1
ARID2	IDH1	0.704	1
ARID2	ZFX	0.704	1
ARID2	Amp_12q15	0.704	1
BTK	14q-Del	0.704	1
BTK	Del_5q12.1	0.704	1
CNTN5	6p-Amp	0.704	1
COL3A1	18p-Del	0.704	1
EPHA4	Del_10p15.3	0.704	1
NUP214	Del_5q12.1	0.704	1
ZFX	Del_5q12.1	0.704	1
11q-Del	Del_2q37.3	0.704	1
Amp_8q24.21	Del_16p13.3	0.704	1
BTK	Del_10p15.3	0.705	1
C10orf28	STK19	0.705	1
EMG1	HSD11B1	0.705	1
EMG1	STK19	0.705	1
EPHA4	9q-Del	0.705	1
EPHA4	Amp_1q21.3	0.705	1
IDH1	Del_10p15.3	0.705	1
Amp_1q21.3	Amp_11q13.3	0.705	1
PDGFRA	Amp_6p24.3	0.706	1
SLC27A5	Amp_1q44	0.706	1
7q-Amp	Del_4p16.3	0.706	1
APCS	Del_19p13.3	0.707	1
C15orf23	FRMPD4	0.707	1
CCNA1	TRERF1	0.707	1
CDK4	Del_15q13.3	0.707	1
CYP3A5	Del_3q13.31	0.707	1
EZH2	PDGFRA	0.707	1
FLT1	11q-Del	0.707	1
IGF1R	Del_19p13.3	0.707	1
KIT	PDGFRA	0.707	1
KRT73	PTPN22	0.707	1
KRT73	8p-Amp	0.707	1
MYO16	20q-Amp	0.707	1
NUDT11	Amp_1p12	0.707	1
NUDT11	Del_15q13.3	0.707	1
PTPN11	Del_15q13.3	0.707	1
RIPK4	8p-Amp	0.707	1
RIPK4	Del_5p15.31	0.707	1
RPTN	Del_5q31.3	0.707	1
RPTN	Del_6q21	0.707	1
SLC38A4	Amp_5p15.33	0.707	1
SYK	Del_3q13.31	0.707	1
TP63	Amp_1q44	0.707	1
11q-Del	Del_16p13.3	0.707	1
Amp_1q44	Del_16q24.3	0.707	1
Amp_4q12	Del_10q23.31	0.707	1
Amp_12q15	Del_10q23.31	0.707	1
Del_19p13.3	Del_Xp21.1	0.707	1
APCS	Amp_6p24.3	0.708	1
DDX3X	EPHA6	0.708	1
IGF1R	Amp_6p24.3	0.708	1
KIT	Del_10p15.3	0.708	1
Amp_1q21.3	Del_9p21.3	0.708	1
ATP5F1	CTNNB1	0.709	1
ATP5F1	Amp_15q26.2	0.709	1
CAMTA1	Amp_17q25.3	0.709	1
CCK	CTNNB1	0.709	1
CCK	Amp_15q26.2	0.709	1
CTNNB1	FAM58A	0.709	1
CTNNB1	KRAS	0.709	1
CYP3A4	MLL	0.709	1
CYP3A4	17p-Del	0.709	1
DDX3X	Amp_5p15.33	0.709	1
DDX3X	Del_10q23.31	0.709	1
FAM58A	KYNU	0.709	1
FAM58A	MAP2K1	0.709	1
FAM58A	Amp_15q26.2	0.709	1
GNAQ	KYNU	0.709	1
GNAQ	MAP2K1	0.709	1
GNAQ	Amp_15q26.2	0.709	1
HSD11B1	Amp_1q21.3	0.709	1
KRAS	KYNU	0.709	1
KRAS	MAP2K1	0.709	1
KRAS	Amp_15q26.2	0.709	1
LGR6	17p-Del	0.709	1
MLL	RAC1	0.709	1
MYO16	Amp_17q25.3	0.709	1
NAP1L2	Amp_17q25.3	0.709	1
PTEN	Del_1p22.1	0.709	1
PTEN	Del_4p16.3	0.709	1
RAC1	20q-Amp	0.709	1
TP63	Del_5q12.1	0.709	1
TPTE	10p-Del	0.709	1
Amp_5p15.33	Amp_6q12	0.709	1
ARID2	Amp_7p22.1	0.71	1
C10orf54	CCNA1	0.71	1
C10orf54	GLI1	0.71	1
C10orf54	RIPK4	0.71	1
CCNA1	CDK4	0.71	1
CCNA1	OXA1L	0.71	1
CDC42BPA	CDK4	0.71	1
CDC42BPA	NUDT11	0.71	1
CDC42BPA	PTPN11	0.71	1
CDC42BPA	S100A8	0.71	1
CDK4	EZH2	0.71	1
CDK4	GLI1	0.71	1
CDK4	KIT	0.71	1
CDK4	KRT73	0.71	1
CDK4	RIPK4	0.71	1
CTNNB1	TP63	0.71	1
EZH2	NUDT11	0.71	1
GLI1	PTPN11	0.71	1
GML	TP63	0.71	1
GML	Del_16q24.3	0.71	1
KCND2	SLC27A5	0.71	1
KIT	NUDT11	0.71	1
KIT	PTPN11	0.71	1
KRT73	S100A8	0.71	1
KYNU	Del_16q24.3	0.71	1
NUDT11	RIPK4	0.71	1
OXA1L	RIPK4	0.71	1
THSD7B	Amp_20q13.33	0.71	1
TP63	Amp_15q26.2	0.71	1
Amp_20q13.33	Del_12q23.3	0.71	1
Amp_22q13.2	Del_13q34	0.71	1
DCLK3	Del_15q13.3	0.711	1
DMC1	Del_11q23.3	0.711	1
EPHA4	Del_8p23.3	0.711	1
GUCY2F	Del_16q12.1	0.711	1
NBPF1	Amp_1p12	0.711	1
OR4S2	Amp_20q13.33	0.711	1
RPTN	13q-Amp	0.711	1
SLC27A5	Del_10q23.31	0.711	1
TTN	Del_9p23	0.711	1
XIRP2	13q-Amp	0.711	1
6p-Del	Del_8p23.3	0.711	1
6p-Del	Del_15q21.1	0.711	1
Amp_3p13	Del_10p15.3	0.711	1
C10orf28	SLC9A11	0.712	1
C10orf28	6p-Amp	0.712	1
DMC1	Del_12q23.3	0.712	1
EMG1	SLC9A11	0.712	1
EMG1	6p-Amp	0.712	1
EMG1	Del_6q26	0.712	1
GML	Del_12q23.3	0.712	1
PDGFRA	Amp_11q13.3	0.712	1
PTPN22	6p-Del	0.712	1
SLC9A11	11p-Del	0.712	1
STK19	Amp_13q31.3	0.712	1
TRERF1	Amp_11q13.3	0.712	1
Amp_7p22.1	Amp_13q31.3	0.712	1
Amp_7q34	Del_Xp21.1	0.712	1
Amp_11q13.3	Del_5p15.31	0.712	1
APCS	Del_14q23.3	0.713	1
BRAF	Del_4p16.3	0.713	1
CDKN2A	MPP7	0.713	1
CDKN2A	Del_1p22.1	0.713	1
FLT1	Del_11q23.3	0.713	1
GNAQ	THSD7B	0.713	1
HSD11B1	Amp_1p12	0.713	1
HSD11B1	Del_5q31.3	0.713	1
IGF1R	Del_14q23.3	0.713	1
IGF1R	Del_16q12.1	0.713	1
SELP	Del_10p15.3	0.713	1
STK19	Del_5q31.3	0.713	1
STK19	Del_15q13.3	0.713	1
SYK	Del_14q23.3	0.713	1
THSD7B	Del_9p23	0.713	1
ACSBG1	BRAF	0.714	1
ANO4	17p-Del	0.714	1
CAMTA1	Del_16q12.1	0.714	1
PTEN	Del_14q23.3	0.714	1
USH2A	Amp_7p22.1	0.714	1
22q-Amp	Del_14q23.3	0.714	1
EPHA6	IDH1	0.715	1
EPHA6	9q-Del	0.715	1
EPHA6	Amp_12q15	0.715	1
MAP2K1	16q-Del	0.715	1
MLL	NRAS	0.715	1
NRAS	10p-Del	0.715	1
OR6C74	16q-Del	0.715	1
USP9X	Amp_12q14.1	0.715	1
USP9X	Del_4p16.3	0.715	1
13q-Amp	Del_9p23	0.715	1
8q-Amp	6p-Del	0.715	1
MLL	9p-Del	0.716	1
NBPF1	Del_9p21.3	0.716	1
20p-Amp	Del_9p21.3	0.716	1
6p-Amp	Del_16p13.3	0.716	1
C15orf23	MAP2K1	0.718	1
CTNNB1	PARM1	0.718	1
CYP3A5	Amp_1q44	0.718	1
EPHA4	6q-Del	0.718	1
FRMPD4	Del_1p36.31	0.718	1
FRMPD4	Del_4q34.3	0.718	1
GUCY2F	KYNU	0.718	1
GUCY2F	Amp_15q26.2	0.718	1
MYO16	Amp_7p22.1	0.718	1
NUDT11	Del_8p23.3	0.718	1
NUDT11	Del_15q21.1	0.718	1
OXA1L	Del_8p23.3	0.718	1
PARM1	Amp_15q26.2	0.718	1
PTPN11	Del_8p23.3	0.718	1
PTPN11	Del_15q21.1	0.718	1
6q-Del	Amp_11q13.3	0.718	1
Amp_22q13.2	Del_15q13.3	0.718	1
CPA3	20p-Amp	0.719	1
CPA3	Del_2q37.3	0.719	1
CTNNB1	10q-Del	0.719	1
DDX3X	FGFR2	0.719	1
DDX3X	Del_2q37.3	0.719	1
FGFR2	PPP6C	0.719	1
KEL	Amp_4q12	0.719	1
KEL	Amp_12q15	0.719	1
NBPF1	PPP6C	0.719	1
NUP214	Del_4q34.3	0.719	1
POTEG	PPP6C	0.719	1
POTEG	Amp_6q12	0.719	1
RAC1	20p-Amp	0.719	1
RELN	Amp_20q13.33	0.719	1
RPTN	8q-Amp	0.719	1
RPTN	Del_16q24.3	0.719	1
ZFX	Del_1p36.31	0.719	1
ZFX	Del_4q34.3	0.719	1
20p-Amp	Amp_6q12	0.719	1
Amp_3p13	Del_16p13.3	0.719	1
Amp_4q12	Del_4q34.3	0.719	1
Amp_6q12	Del_2q37.3	0.719	1
CCK	USH2A	0.72	1
CTNNA3	HRAS	0.72	1
GNAQ	Del_10q21.1	0.72	1
HRAS	Amp_3p13	0.72	1
KYNU	Amp_6p24.3	0.72	1
MAP2K1	Amp_6p24.3	0.72	1
POTEG	7q-Amp	0.72	1
APC	MLL	0.721	1
APC	17p-Del	0.721	1
ARID2	7p-Amp	0.721	1
KYNU	Del_6q26	0.721	1
PDGFRA	20q-Amp	0.721	1
PDGFRA	Del_16q24.3	0.721	1
PTPN22	20q-Amp	0.721	1
PTPN22	17p-Del	0.721	1
PTPN22	Del_16q24.3	0.721	1
20q-Amp	Del_5p15.31	0.721	1
Amp_1q44	Del_5p15.31	0.721	1
CDC42BPA	Del_6q21	0.722	1
EZH2	Del_6q21	0.722	1
GLI1	Del_6q21	0.722	1
RIPK4	Del_6q21	0.722	1
TTN	Del_Xp21.1	0.722	1
20q-Amp	Del_15q13.3	0.722	1
17p-Del	Del_15q13.3	0.722	1
Amp_1q44	Del_4q34.3	0.722	1
ACSBG1	EMG1	0.723	1
APCS	C10orf28	0.723	1
ATP5F1	Del_16q24.3	0.723	1
BTK	CPA3	0.723	1
BTK	CYP3A4	0.723	1
BTK	DDX3X	0.723	1
BTK	PPP6C	0.723	1
C10orf28	IGF1R	0.723	1
CAMTA1	EZH2	0.723	1
CAMTA1	KIT	0.723	1
CCNA1	22q-Amp	0.723	1
CNTN5	Del_10p15.3	0.723	1
CPA3	ZFX	0.723	1
CPA3	Amp_12q15	0.723	1
CYP3A4	ZFX	0.723	1
CYP3A4	Amp_4q12	0.723	1
CYP3A4	Amp_12q15	0.723	1
DDX3X	Amp_4q12	0.723	1
DDX3X	Amp_12q15	0.723	1
EMG1	IGF1R	0.723	1
EMG1	SYK	0.723	1
EZH2	PTEN	0.723	1
FLT1	Del_4q34.3	0.723	1
FRMPD4	20p-Amp	0.723	1
GLI1	22q-Amp	0.723	1
GNAQ	Del_16q24.3	0.723	1
GUCY2F	Del_11q23.3	0.723	1
IDH1	PPP6C	0.723	1
IDH1	Amp_6q12	0.723	1
KEL	Del_1p36.31	0.723	1
KIT	22q-Amp	0.723	1
KRAS	8q-Amp	0.723	1
KRAS	Del_16q24.3	0.723	1
KRT73	PTEN	0.723	1
MYO3B	18p-Del	0.723	1
MYO3B	Del_2q37.3	0.723	1
NAP1L2	RIPK4	0.723	1
NUP214	RAC1	0.723	1
PPP6C	ZFX	0.723	1
RAC1	ZFX	0.723	1
RAC1	Amp_12q15	0.723	1
RIPK4	22q-Amp	0.723	1
Amp_8q24.21	Amp_17q25.3	0.723	1
APC	1q-Amp	0.724	1
ARID2	Del_12q23.3	0.724	1
C7orf58	5q-Del	0.724	1
DCLK3	11p-Del	0.724	1
POTEG	TP53	0.724	1
TP53	18p-Del	0.724	1
11q-Del	Amp_5p15.33	0.724	1
14q-Del	Del_13q34	0.724	1
ATP5F1	IDH1	0.725	1
ATP5F1	Amp_4q12	0.725	1
ATP5F1	Amp_12q15	0.725	1
BRAF	Del_6q26	0.725	1
BTK	CCK	0.725	1
BTK	FAM58A	0.725	1
BTK	GNAQ	0.725	1
C10orf28	Amp_7q34	0.725	1
CCK	IDH1	0.725	1
CCK	Amp_12q15	0.725	1
FAM58A	IDH1	0.725	1
FAM58A	ZFX	0.725	1
FAM58A	Amp_4q12	0.725	1
FAM58A	Amp_12q15	0.725	1
GNAQ	IDH1	0.725	1
GNAQ	Amp_4q12	0.725	1
KRAS	NUP214	0.725	1
KRAS	ZFX	0.725	1
PTPN22	Amp_3p13	0.725	1
8p-Amp	Amp_3p13	0.725	1
BTK	NRAS	0.726	1
C7orf58	Del_16q12.1	0.726	1
CBL	KRTAP5-10	0.726	1
CBL	SLC27A5	0.726	1
CPA3	Del_15q13.3	0.726	1
DDX3X	Amp_1p12	0.726	1
DDX3X	Del_15q13.3	0.726	1
KRTAP5-10	NGF	0.726	1
KRTAP5-10	RB1	0.726	1
KRTAP5-10	RQCD1	0.726	1
MAN1A1	NRAS	0.726	1
MSTN	RQCD1	0.726	1
NF1	16q-Del	0.726	1
NGF	SLC27A5	0.726	1
NGF	ZNF780B	0.726	1
NRAS	RELN	0.726	1
OR6C74	SLC27A5	0.726	1
RAC1	Amp_1p12	0.726	1
RAC1	Del_15q13.3	0.726	1
RB1	SLC27A5	0.726	1
RB1	ZNF780B	0.726	1
RQCD1	SLC27A5	0.726	1
RQCD1	ZNF780B	0.726	1
USH2A	Del_8p23.3	0.726	1
USP17L2	Amp_22q13.2	0.726	1
Amp_6q12	Del_15q13.3	0.726	1
Amp_13q31.3	Amp_22q13.2	0.726	1
APCS	CDKN2A	0.727	1
C10orf54	CNTN5	0.727	1
CBL	EPHA7	0.727	1
CDK4	CNTN5	0.727	1
CDKN2A	CYP3A5	0.727	1
CDKN2A	GUCY2F	0.727	1
CDKN2A	IGF1R	0.727	1
CDKN2A	PARM1	0.727	1
CNTN5	NUDT11	0.727	1
CNTN5	Del_6q21	0.727	1
DMC1	NBPF1	0.727	1
EPHA7	RB1	0.727	1
EPHA7	RQCD1	0.727	1
FGFR2	GML	0.727	1
FRMPD4	Del_10q21.1	0.727	1
GML	20p-Amp	0.727	1
GML	18p-Del	0.727	1
GUCY2F	Del_13q34	0.727	1
HSD11B1	NF1	0.727	1
KRTAP5-10	Del_10q26.3	0.727	1
NUDT11	10q-Del	0.727	1
OXA1L	10q-Del	0.727	1
PARM1	Del_12q23.3	0.727	1
RELN	Del_8p23.3	0.727	1
RELN	Del_15q21.1	0.727	1
STK19	Del_8p23.3	0.727	1
STK19	Del_15q21.1	0.727	1
13q-Amp	Del_12q23.3	0.727	1
Amp_12q15	Del_10q26.3	0.727	1
ARID2	EPHA4	0.728	1
FRMPD4	HRAS	0.728	1
MYO16	Amp_22q13.2	0.728	1
USP17L2	Del_Xp21.1	0.728	1
Amp_1q21.3	Del_19p13.3	0.728	1
Amp_7p22.1	Del_16p13.3	0.728	1
Amp_13q31.3	Del_Xp21.1	0.728	1
ALPK2	Del_11q23.3	0.729	1
ANO4	Del_13q34	0.729	1
ARID2	C10orf54	0.729	1
ARID2	CDK4	0.729	1
ARID2	NUDT11	0.729	1
ARID2	OXA1L	0.729	1
ARID2	PTPN11	0.729	1
C10orf54	C7orf58	0.729	1
C7orf58	PTPN11	0.729	1
IGF1R	1q-Amp	0.729	1
KCND2	PTEN	0.729	1
KEL	Del_16q23.1	0.729	1
NRAS	Amp_11q13.3	0.729	1
NUDT11	Del_5q12.1	0.729	1
OXA1L	14q-Del	0.729	1
PTPN11	14q-Del	0.729	1
SELP	Amp_1p12	0.729	1
SYK	1q-Amp	0.729	1
Amp_20q13.33	Del_10q21.1	0.729	1
Amp_22q13.2	Del_11q23.3	0.729	1
OR4S2	THSD7B	0.73	1
USP17L2	Del_19p13.3	0.73	1
Amp_13q31.3	Del_3q13.31	0.73	1
Amp_13q31.3	Del_19p13.3	0.73	1
C10orf54	DMC1	0.731	1
C10orf54	GML	0.731	1
C15orf23	Amp_6p24.3	0.731	1
CDK4	DMC1	0.731	1
CDK4	GML	0.731	1
CTNNB1	SELP	0.731	1
CTNNB1	SLC38A4	0.731	1
DCLK3	Del_8p23.3	0.731	1
DMC1	OXA1L	0.731	1
DMC1	PTPN11	0.731	1
DMC1	S100A8	0.731	1
EPHA7	KYNU	0.731	1
GML	NUDT11	0.731	1
GML	OXA1L	0.731	1
GML	PTPN11	0.731	1
GML	S100A8	0.731	1
OR4S2	9p-Del	0.731	1
PARM1	Amp_6p24.3	0.731	1
POTEG	Del_15q21.1	0.731	1
RB1	11q-Del	0.731	1
RELN	Del_10q26.3	0.731	1
RQCD1	11q-Del	0.731	1
STK19	Amp_11q13.3	0.731	1
20p-Amp	Del_8p23.3	0.731	1
6p-Del	Amp_8q24.21	0.731	1
Amp_12q14.1	Del_16q23.1	0.731	1
CDC42BPA	6p-Amp	0.732	1
CDKN2A	PTEN	0.732	1
DDX3X	Del_10q26.3	0.732	1
DMC1	DSG3	0.732	1
EMG1	RPTN	0.732	1
EMG1	Del_14q23.3	0.732	1
EZH2	SLC9A11	0.732	1
GLI1	6p-Amp	0.732	1
GML	11p-Del	0.732	1
MPP7	Del_1p22.1	0.732	1
NRAS	OR6C74	0.732	1
NRAS	RQCD1	0.732	1
NRAS	Del_3q13.31	0.732	1
OR4S2	9q-Del	0.732	1
USP9X	9q-Del	0.732	1
Amp_6p24.3	Del_4p16.3	0.732	1
Amp_17q25.3	Del_4p16.3	0.732	1
C10orf28	Amp_1q21.3	0.733	1
EMG1	Amp_1q21.3	0.733	1
EPHA4	PTEN	0.733	1
EPHA4	22q-Amp	0.733	1
KRAS	Del_10p15.3	0.733	1
MPP7	17p-Del	0.733	1
RPTN	Del_16q23.1	0.733	1
20q-Amp	Amp_17q25.3	0.733	1
22q-Amp	Amp_11q13.3	0.733	1
17p-Del	Del_1p22.1	0.733	1
Amp_5p15.33	Del_1p22.1	0.733	1
CDK4	XIRP2	0.734	1
CNTN5	Amp_1p12	0.734	1
KEL	Del_9p23	0.734	1
16q-Del	Amp_7q34	0.734	1
Amp_1q21.3	Del_15q21.1	0.734	1
PPP6C	Del_10q21.1	0.735	1
Amp_1q44	Del_15q13.3	0.735	1
Amp_7q34	Del_2q37.3	0.735	1
CBL	Del_6q26	0.736	1
CDKN2A	Del_5q31.3	0.736	1
EPHA6	16q-Del	0.736	1
FGFR2	NRAS	0.736	1
MYO3B	6p-Amp	0.736	1
RB1	Del_6q26	0.736	1
CTNNB1	TP53	0.737	1
CTNNB1	7p-Amp	0.737	1
DDX3X	TPTE	0.737	1
DDX3X	7p-Amp	0.737	1
DSG3	Amp_17q25.3	0.737	1
FRMPD4	KRTAP5-10	0.737	1
FRMPD4	SLC27A5	0.737	1
HRAS	Del_12q23.3	0.737	1
HRAS	Del_13q34	0.737	1
KEL	Del_16q24.3	0.737	1
MYO3B	Amp_12q14.1	0.737	1
MYO3B	Del_16p13.3	0.737	1
NBPF1	Del_5q31.3	0.737	1
RELN	Del_14q23.3	0.737	1
1q-Amp	Del_5q31.3	0.737	1
11p-Del	Amp_15q26.2	0.737	1
17p-Del	Amp_7p22.1	0.737	1
DDX3X	TRERF1	0.738	1
PDGFRA	PPP6C	0.738	1
PPP6C	8p-Amp	0.738	1
RELN	Del_10q21.1	0.738	1
TTN	Amp_7p22.1	0.738	1
CCNA1	9p-Del	0.739	1
CCNA1	Del_19p13.3	0.739	1
CTNNB1	Amp_12q14.1	0.739	1
CTNNB1	Del_16p13.3	0.739	1
EPHA4	Del_Xp21.1	0.739	1
EZH2	Del_3q13.31	0.739	1
GLI1	Del_3q13.31	0.739	1
KCND2	7q-Amp	0.739	1
KIT	Del_3q13.31	0.739	1
KRT73	9p-Del	0.739	1
KRT73	Del_19p13.3	0.739	1
KYNU	Amp_12q14.1	0.739	1
KYNU	Del_16p13.3	0.739	1
MAP2K1	Del_16p13.3	0.739	1
PARM1	Del_6q21	0.739	1
22q-Amp	Del_10q26.3	0.739	1
6p-Del	Del_Xp21.1	0.739	1
Amp_11q13.3	Del_Xp21.1	0.739	1
ANO4	Amp_1p12	0.74	1
APC	Amp_1p12	0.74	1
APCS	20q-Amp	0.74	1
APCS	Amp_5p15.33	0.74	1
C10orf54	FLT1	0.74	1
CBL	MPP7	0.74	1
CTNNA3	NRAS	0.74	1
DSG3	GNAQ	0.74	1
DSG3	KRAS	0.74	1
EZH2	7p-Amp	0.74	1
FLT1	NUDT11	0.74	1
GNAQ	TP53	0.74	1
IGF1R	20q-Amp	0.74	1
IGF1R	Amp_5p15.33	0.74	1
KEL	NUDT11	0.74	1
KIT	7p-Amp	0.74	1
KRAS	TP53	0.74	1
MPP7	NGF	0.74	1
MPP7	RQCD1	0.74	1
NGF	Amp_17q25.3	0.74	1
NUDT11	Del_4q34.3	0.74	1
OR6C74	Amp_17q25.3	0.74	1
OR6C74	Del_1p22.1	0.74	1
OR6C74	Del_4p16.3	0.74	1
OXA1L	Del_1p36.31	0.74	1
OXA1L	Del_4q34.3	0.74	1
PDGFRA	Del_15q13.3	0.74	1
PTPN11	Del_4q34.3	0.74	1
RB1	7q-Amp	0.74	1
RB1	Del_4p16.3	0.74	1
RQCD1	7q-Amp	0.74	1
SYK	11q-Del	0.74	1
TPTE	Del_19p13.3	0.74	1
TRERF1	Amp_1p12	0.74	1
TRERF1	Del_15q13.3	0.74	1
7p-Amp	Del_3q13.31	0.74	1
8p-Amp	Amp_1p12	0.74	1
C10orf28	CDKN2A	0.741	1
CCK	STK19	0.741	1
CDK4	Del_11q23.3	0.741	1
EPHA4	10q-Del	0.741	1
FAM58A	HSD11B1	0.741	1
FAM58A	STK19	0.741	1
GNAQ	HSD11B1	0.741	1
HSD11B1	Del_5q12.1	0.741	1
KRAS	STK19	0.741	1
NAP1L2	Amp_7p22.1	0.741	1
OXA1L	Del_11q23.3	0.741	1
PTPN11	Del_11q23.3	0.741	1
STK19	Del_5q12.1	0.741	1
ZNF780B	Amp_7q34	0.741	1
Amp_22q13.2	Del_2q37.3	0.741	1
APC	DMC1	0.742	1
APCS	Amp_13q31.3	0.742	1
C10orf28	KIT	0.742	1
C10orf28	KRT73	0.742	1
C15orf23	Amp_1q44	0.742	1
CCNA1	EMG1	0.742	1
CDC42BPA	EMG1	0.742	1
CPA3	Del_15q21.1	0.742	1
CYP3A5	Amp_13q31.3	0.742	1
DDX3X	NF1	0.742	1
DMC1	PDGFRA	0.742	1
DMC1	PTPN22	0.742	1
DMC1	8p-Amp	0.742	1
EMG1	EZH2	0.742	1
EMG1	GLI1	0.742	1
EMG1	KIT	0.742	1
EMG1	KRT73	0.742	1
EMG1	RIPK4	0.742	1
GML	PDGFRA	0.742	1
GML	PTPN22	0.742	1
GML	Del_5p15.31	0.742	1
NF1	PPP6C	0.742	1
NF1	Amp_6q12	0.742	1
SYK	Amp_13q31.3	0.742	1
Amp_6q12	Del_15q21.1	0.742	1
BTK	GUCY2F	0.743	1
BTK	PARM1	0.743	1
C15orf23	IDH1	0.743	1
C15orf23	Amp_5p15.33	0.743	1
GUCY2F	IDH1	0.743	1
GUCY2F	MAN1A1	0.743	1
GUCY2F	Amp_5p15.33	0.743	1
IGF1R	10q-Del	0.743	1
USP9X	6q-Del	0.743	1
ZFX	13q-Amp	0.743	1
13q-Amp	17p-Del	0.743	1
13q-Amp	Amp_5p15.33	0.743	1
Amp_12q14.1	Del_6q26	0.743	1
CCNA1	Del_16q23.1	0.744	1
EZH2	Del_16q23.1	0.744	1
GLI1	Del_16q23.1	0.744	1
KEL	Del_12q23.3	0.744	1
KIT	Del_16q23.1	0.744	1
7q-Amp	17p-Del	0.744	1
7q-Amp	Amp_5p15.33	0.744	1
Amp_20q13.33	Del_15q21.1	0.744	1
Del_1p36.31	Del_13q34	0.744	1
C15orf23	FGFR2	0.745	1
C15orf23	NBPF1	0.745	1
C15orf23	POTEG	0.745	1
C15orf23	Del_2q37.3	0.745	1
CDKN2A	8q-Amp	0.745	1
DCLK3	Del_13q34	0.745	1
DSG3	6p-Del	0.745	1
EPHA4	11p-Del	0.745	1
FGFR2	GUCY2F	0.745	1
FGFR2	Del_13q34	0.745	1
FLT1	6p-Del	0.745	1
GUCY2F	Del_2q37.3	0.745	1
HRAS	POTEG	0.745	1
HRAS	20p-Amp	0.745	1
HRAS	18p-Del	0.745	1
HRAS	Del_2q37.3	0.745	1
KCND2	6q-Del	0.745	1
NBPF1	13q-Amp	0.745	1
PTEN	Del_9p23	0.745	1
13q-Amp	18p-Del	0.745	1
Amp_11q13.3	Del_1p36.31	0.745	1
NF1	17p-Del	0.746	1
NRAS	Del_6q21	0.746	1
10p-Del	Amp_4q12	0.746	1
10p-Del	Amp_12q15	0.746	1
5q-Del	Amp_8q24.21	0.746	1
C10orf28	Amp_8q24.21	0.747	1
EMG1	Amp_8q24.21	0.747	1
EPHA6	13q-Amp	0.747	1
KYNU	Del_1p22.1	0.747	1
Amp_15q26.2	Amp_17q25.3	0.747	1
Amp_15q26.2	Del_4p16.3	0.747	1
ARID2	CDKN2A	0.748	1
ARID2	16q-Del	0.748	1
GLI1	Del_10q23.31	0.748	1
7p-Amp	Amp_17q25.3	0.748	1
Amp_1q44	Del_14q23.3	0.748	1
ATP5F1	Amp_20q13.33	0.749	1
ATP5F1	Amp_22q13.2	0.749	1
CCK	Amp_22q13.2	0.749	1
FAM58A	Amp_20q13.33	0.749	1
GNAQ	Amp_22q13.2	0.749	1
NBPF1	Amp_1q21.3	0.749	1
STK19	Del_10q21.1	0.749	1
USP9X	Amp_3p13	0.749	1
1q-Amp	Del_16q23.1	0.749	1
16q-Del	Amp_12q15	0.749	1
ALPK2	CTNNB1	0.75	1
ALPK2	MAP2K1	0.75	1
BRAF	OR6C74	0.75	1
BRAF	RQCD1	0.75	1
CAMTA1	20q-Amp	0.75	1
CAMTA1	17p-Del	0.75	1
CBL	NGF	0.75	1
CBL	OR6C74	0.75	1
CBL	RQCD1	0.75	1
CPA3	STK19	0.75	1
CPA3	Del_Xp21.1	0.75	1
CTNNB1	Amp_20q13.33	0.75	1
DDX3X	STK19	0.75	1
DDX3X	Del_Xp21.1	0.75	1
HSD11B1	Amp_6q12	0.75	1
KRTAP5-10	9q-Del	0.75	1
KRTAP5-10	Del_12q23.3	0.75	1
KYNU	Amp_20q13.33	0.75	1
LGR6	STK19	0.75	1
LGR6	Del_Xp21.1	0.75	1
MAP2K1	Amp_22q13.2	0.75	1
MSTN	Amp_1q21.3	0.75	1
MSTN	Del_12q23.3	0.75	1
MSTN	Del_13q34	0.75	1
MYO16	Del_15q21.1	0.75	1
NAP1L2	Amp_5p15.33	0.75	1
NBPF1	Del_5q12.1	0.75	1
NGF	RQCD1	0.75	1
POTEG	14q-Del	0.75	1
PPP6C	Del_Xp21.1	0.75	1
PTEN	20q-Amp	0.75	1
RAC1	Del_Xp21.1	0.75	1
SLC27A5	Del_12q23.3	0.75	1
SLC27A5	Del_13q34	0.75	1
ZNF780B	Del_13q34	0.75	1
1q-Amp	Amp_11q13.3	0.75	1
Amp_6q12	Del_Xp21.1	0.75	1
APCS	7q-Amp	0.751	1
C10orf28	MLL	0.751	1
C10orf28	20q-Amp	0.751	1
C10orf28	Amp_5p15.33	0.751	1
C10orf54	5q-Del	0.751	1
CPA3	Del_16q24.3	0.751	1
DDX3X	8q-Amp	0.751	1
DDX3X	Del_16q24.3	0.751	1
EMG1	20q-Amp	0.751	1
NUDT11	5q-Del	0.751	1
PPP6C	Del_16q24.3	0.751	1
TP53	11p-Del	0.751	1
1q-Amp	16q-Del	0.751	1
6q-Del	Del_15q21.1	0.751	1
BTK	CNTN5	0.752	1
C10orf54	7p-Amp	0.752	1
CBL	KCND2	0.752	1
CDK4	TPTE	0.752	1
CNTN5	ZFX	0.752	1
CNTN5	Amp_12q15	0.752	1
IDH1	TP63	0.752	1
KCND2	NGF	0.752	1
KCND2	RB1	0.752	1
NRAS	Amp_8q24.21	0.752	1
PTPN11	7p-Amp	0.752	1
ACSBG1	Del_15q13.3	0.753	1
ANO4	Del_6q21	0.753	1
APCS	Amp_1p12	0.753	1
APCS	Del_15q13.3	0.753	1
C10orf54	KRTAP5-10	0.753	1
CDK4	SLC27A5	0.753	1
CDK4	ZNF780B	0.753	1
CYP3A5	Amp_1p12	0.753	1
DDX3X	9q-Del	0.753	1
EPHA4	10p-Del	0.753	1
KRTAP5-10	NUDT11	0.753	1
KRTAP5-10	PTPN11	0.753	1
KRTAP5-10	S100A8	0.753	1
LGR6	9q-Del	0.753	1
MSTN	NUDT11	0.753	1
MSTN	PTPN11	0.753	1
MSTN	S100A8	0.753	1
PPP6C	9q-Del	0.753	1
PPP6C	Amp_1q21.3	0.753	1
S100A8	SLC27A5	0.753	1
SYK	Amp_1p12	0.753	1
TP53	Amp_6p24.3	0.753	1
TPTE	Del_1p36.31	0.753	1
6p-Amp	Amp_7q34	0.753	1
APC	HRAS	0.754	1
CAMTA1	Del_16q24.3	0.754	1
COL3A1	Del_15q13.3	0.754	1
HRAS	PTPN22	0.754	1
HRAS	TRERF1	0.754	1
HRAS	8p-Amp	0.754	1
HRAS	Del_5p15.31	0.754	1
NAP1L2	Del_16q24.3	0.754	1
6p-Del	Del_3q13.31	0.754	1
Amp_12q14.1	Del_13q34	0.754	1
Amp_17q25.3	Del_15q13.3	0.754	1
ANO4	DMC1	0.755	1
APC	7q-Amp	0.755	1
CBL	TTN	0.755	1
COL3A1	Amp_3p13	0.755	1
DSG3	8p-Amp	0.755	1
FLT1	HSD11B1	0.755	1
FRMPD4	Del_10p15.3	0.755	1
HSD11B1	Del_4q34.3	0.755	1
KCND2	Amp_17q25.3	0.755	1
MPP7	Amp_7p22.1	0.755	1
MYO3B	Del_16q23.1	0.755	1
NF1	Amp_6p24.3	0.755	1
NGF	TTN	0.755	1
RB1	TTN	0.755	1
STK19	Del_4q34.3	0.755	1
ALPK2	Del_4p16.3	0.756	1
ANO4	Del_6q26	0.756	1
CCNA1	Del_14q23.3	0.756	1
CDC42BPA	Del_16q12.1	0.756	1
DSG3	11q-Del	0.756	1
EZH2	Del_16q12.1	0.756	1
GLI1	Del_16q12.1	0.756	1
KIT	RPTN	0.756	1
KIT	Del_16q12.1	0.756	1
MPP7	Amp_20q13.33	0.756	1
RIPK4	Del_14q23.3	0.756	1
RIPK4	Del_16q12.1	0.756	1
RPTN	Del_16q12.1	0.756	1
SLC38A4	Amp_3p13	0.756	1
Amp_8q24.21	Del_16q12.1	0.756	1
Amp_17q25.3	Amp_20q13.33	0.756	1
Amp_17q25.3	Del_10p15.3	0.756	1
ANO4	CCK	0.757	1
ANO4	GNAQ	0.757	1
ANO4	KRAS	0.757	1
CAMTA1	DMC1	0.757	1
CNTN5	6q-Del	0.757	1
RPTN	Del_10q23.31	0.757	1
ACSBG1	CCK	0.758	1
ACSBG1	FAM58A	0.758	1
ACSBG1	GNAQ	0.758	1
ACSBG1	KRAS	0.758	1
APCS	CCK	0.758	1
APCS	FAM58A	0.758	1
APCS	GNAQ	0.758	1
APCS	KRAS	0.758	1
ATP5F1	CYP3A5	0.758	1
CAMTA1	PPP6C	0.758	1
CCK	IGF1R	0.758	1
CYP3A4	PTEN	0.758	1
CYP3A4	22q-Amp	0.758	1
CYP3A5	FAM58A	0.758	1
CYP3A5	GNAQ	0.758	1
CYP3A5	Del_9p21.3	0.758	1
FAM58A	IGF1R	0.758	1
FAM58A	SYK	0.758	1
KRAS	SYK	0.758	1
MLL	6p-Amp	0.758	1
NAP1L2	PPP6C	0.758	1
NAP1L2	Amp_6q12	0.758	1
NF1	8p-Amp	0.758	1
PPP6C	Del_10p15.3	0.758	1
PTEN	Amp_6q12	0.758	1
RELN	14q-Del	0.758	1
RELN	Del_16q24.3	0.758	1
SLC27A5	6q-Del	0.758	1
TRERF1	Del_15q21.1	0.758	1
ZNF780B	6q-Del	0.758	1
6p-Amp	17p-Del	0.758	1
Del_5p15.31	Del_8p23.3	0.758	1
ARID2	DDX3X	0.759	1
ARID2	RAC1	0.759	1
BRAF	14q-Del	0.759	1
C7orf58	PPP6C	0.759	1
CPA3	14q-Del	0.759	1
KRAS	10p-Del	0.759	1
PPP6C	14q-Del	0.759	1
RAC1	Del_5q12.1	0.759	1
Amp_12q14.1	Del_9p21.3	0.759	1
ACSBG1	6p-Del	0.76	1
APCS	6p-Del	0.76	1
CTNNB1	RELN	0.76	1
CYP3A5	EPHA4	0.76	1
CYP3A5	6p-Del	0.76	1
KIT	RELN	0.76	1
NBPF1	Del_6q26	0.76	1
SYK	Amp_11q13.3	0.76	1
6p-Del	Amp_20q13.33	0.76	1
Amp_11q13.3	Amp_20q13.33	0.76	1
Amp_11q13.3	Amp_22q13.2	0.76	1
C10orf28	GML	0.761	1
C10orf28	Del_15q13.3	0.761	1
C15orf23	Del_Xp21.1	0.761	1
CDKN2A	Del_10p15.3	0.761	1
CDKN2A	Del_19p13.3	0.761	1
CTNNB1	USP9X	0.761	1
DMC1	EMG1	0.761	1
EMG1	GML	0.761	1
EMG1	Del_15q13.3	0.761	1
GUCY2F	Del_Xp21.1	0.761	1
KRTAP5-10	TP63	0.761	1
KRTAP5-10	8q-Amp	0.761	1
KYNU	OR4S2	0.761	1
MAP2K1	OR4S2	0.761	1
MAP2K1	USP9X	0.761	1
MSTN	8q-Amp	0.761	1
OR4S2	Del_10q26.3	0.761	1
PARM1	Del_Xp21.1	0.761	1
RELN	10q-Del	0.761	1
SLC27A5	Del_16q24.3	0.761	1
SYK	Del_5q31.3	0.761	1
USP9X	Amp_15q26.2	0.761	1
ZNF780B	Del_16q24.3	0.761	1
13q-Amp	Del_Xp21.1	0.761	1
6p-Amp	7q-Amp	0.761	1
ALPK2	1q-Amp	0.762	1
CAMTA1	HRAS	0.762	1
DMC1	USH2A	0.762	1
EPHA4	5q-Del	0.762	1
HRAS	PTEN	0.762	1
HRAS	22q-Amp	0.762	1
KCND2	Amp_15q26.2	0.762	1
PTPN11	16q-Del	0.762	1
Amp_6p24.3	Del_12q23.3	0.762	1
ANO4	MAP2K1	0.763	1
BRAF	RELN	0.763	1
HRAS	THSD7B	0.763	1
NBPF1	6q-Del	0.763	1
NUP214	Amp_12q14.1	0.763	1
PPP6C	Del_6q26	0.763	1
ZFX	Amp_12q14.1	0.763	1
BTK	EPHA7	0.764	1
C15orf23	PTPN22	0.764	1
C15orf23	TRERF1	0.764	1
C15orf23	8p-Amp	0.764	1
CBL	CTNNA3	0.764	1
CBL	Amp_3p13	0.764	1
CTNNA3	OR6C74	0.764	1
CTNNA3	RQCD1	0.764	1
EPHA6	11p-Del	0.764	1
EPHA7	IDH1	0.764	1
EPHA7	Amp_12q15	0.764	1
GLI1	Del_10q26.3	0.764	1
GUCY2F	PDGFRA	0.764	1
GUCY2F	PTPN22	0.764	1
GUCY2F	Del_5p15.31	0.764	1
KRTAP5-10	NBPF1	0.764	1
KRTAP5-10	20p-Amp	0.764	1
KRTAP5-10	18p-Del	0.764	1
MSTN	20p-Amp	0.764	1
MSTN	18p-Del	0.764	1
NBPF1	SLC27A5	0.764	1
NUP214	SELP	0.764	1
PARM1	PTPN22	0.764	1
PARM1	8p-Amp	0.764	1
POTEG	SLC27A5	0.764	1
POTEG	ZNF780B	0.764	1
RIPK4	Del_10q26.3	0.764	1
RQCD1	Amp_3p13	0.764	1
SLC27A5	18p-Del	0.764	1
SLC27A5	Del_2q37.3	0.764	1
SLC9A11	9p-Del	0.764	1
ZNF780B	20p-Amp	0.764	1
ZNF780B	18p-Del	0.764	1
13q-Amp	Del_5p15.31	0.764	1
1q-Amp	Del_15q21.1	0.764	1
6p-Amp	9p-Del	0.764	1
Amp_5p15.33	Del_5q31.3	0.764	1
C10orf54	Del_9p23	0.765	1
CNTN5	Del_16q12.1	0.765	1
CYP3A5	NF1	0.765	1
CYP3A5	Del_8p23.3	0.765	1
CYP3A5	Del_15q21.1	0.765	1
IGF1R	Del_15q21.1	0.765	1
MYO3B	OR4S2	0.765	1
PTEN	Amp_1q44	0.765	1
PTPN11	Del_9p23	0.765	1
SLC9A11	Del_12q23.3	0.765	1
Amp_11q13.3	Del_6q21	0.765	1
APC	Del_12q23.3	0.767	1
CAMTA1	Del_15q13.3	0.767	1
CYP3A5	Amp_1q21.3	0.767	1
HRAS	USH2A	0.767	1
IGF1R	9q-Del	0.767	1
KRTAP5-10	Amp_8q24.21	0.767	1
KRTAP5-10	Del_9p23	0.767	1
MSTN	Amp_8q24.21	0.767	1
NBPF1	20p-Amp	0.767	1
PDGFRA	Del_12q23.3	0.767	1
POTEG	Del_2q37.3	0.767	1
SYK	9q-Del	0.767	1
SYK	Amp_1q21.3	0.767	1
USP9X	Del_16q23.1	0.767	1
ZNF780B	Amp_8q24.21	0.767	1
22q-Amp	Amp_1p12	0.767	1
18p-Del	Del_2q37.3	0.767	1
Amp_7p22.1	Del_12q23.3	0.767	1
C10orf54	RELN	0.768	1
CDKN2A	KRT73	0.768	1
EPHA6	7q-Amp	0.768	1
NF1	Del_15q13.3	0.768	1
STK19	Del_10p15.3	0.768	1
Amp_1q21.3	Del_5q12.1	0.768	1
CNTN5	9p-Del	0.769	1
DCLK3	Del_4q34.3	0.769	1
KCND2	Del_10q21.1	0.769	1
MLL	Del_9p21.3	0.769	1
NBPF1	Del_1p36.31	0.769	1
NBPF1	Del_4q34.3	0.769	1
POTEG	Del_1p36.31	0.769	1
POTEG	Del_4q34.3	0.769	1
SELP	Amp_13q31.3	0.769	1
STK19	13q-Amp	0.769	1
STK19	5q-Del	0.769	1
20p-Amp	Del_1p36.31	0.769	1
17p-Del	Amp_7q34	0.769	1
Amp_5p15.33	Amp_7q34	0.769	1
Amp_5p15.33	Del_5q12.1	0.769	1
Del_2q37.3	Del_4q34.3	0.769	1
ALPK2	Del_5q12.1	0.77	1
C10orf28	Del_8p23.3	0.77	1
C10orf28	Del_15q21.1	0.77	1
CDKN2A	6q-Del	0.77	1
EMG1	Del_15q21.1	0.77	1
FRMPD4	PTEN	0.77	1
20q-Amp	Del_16q24.3	0.77	1
6p-Amp	Del_9p23	0.77	1
14q-Del	Amp_22q13.2	0.77	1
Amp_20q13.33	Del_5q12.1	0.77	1
C7orf58	SLC38A4	0.771	1
CCNA1	Del_9p23	0.771	1
CDKN2A	Del_1p36.31	0.771	1
FRMPD4	1q-Amp	0.771	1
HRAS	Del_3q13.31	0.771	1
HRAS	Del_19p13.3	0.771	1
OR6C74	Amp_6p24.3	0.771	1
PDGFRA	Amp_20q13.33	0.771	1
PTPN22	Amp_22q13.2	0.771	1
SELP	Del_5q12.1	0.771	1
6p-Amp	9q-Del	0.771	1
Amp_20q13.33	Del_5p15.31	0.771	1
Amp_22q13.2	Del_5p15.31	0.771	1
CDK4	SELP	0.772	1
DMC1	Del_19p13.3	0.772	1
DSG3	Amp_1q44	0.772	1
EZH2	USP17L2	0.772	1
GLI1	Amp_13q31.3	0.772	1
GML	Del_3q13.31	0.772	1
KIT	Amp_13q31.3	0.772	1
MYO16	NUDT11	0.772	1
MYO16	PTPN11	0.772	1
NUDT11	SLC38A4	0.772	1
PTPN11	SLC38A4	0.772	1
RIPK4	Amp_13q31.3	0.772	1
20p-Amp	Amp_12q14.1	0.772	1
7q-Amp	Amp_1p12	0.772	1
CCK	6p-Amp	0.773	1
CTNNB1	Amp_7q34	0.773	1
FRMPD4	Del_16q12.1	0.773	1
GNAQ	SLC9A11	0.773	1
NF1	13q-Amp	0.773	1
PARM1	Del_8p23.3	0.773	1
Amp_12q14.1	Del_Xp21.1	0.773	1
ANO4	Amp_17q25.3	0.774	1
ATP5F1	CCNA1	0.774	1
CCK	EZH2	0.774	1
CCK	KRT73	0.774	1
CCK	RIPK4	0.774	1
CCNA1	FAM58A	0.774	1
CCNA1	KRAS	0.774	1
CDC42BPA	KRAS	0.774	1
DDX3X	FLT1	0.774	1
EZH2	FAM58A	0.774	1
EZH2	KRAS	0.774	1
FAM58A	GLI1	0.774	1
FAM58A	RIPK4	0.774	1
FLT1	PPP6C	0.774	1
GNAQ	KIT	0.774	1
GNAQ	KRT73	0.774	1
KRAS	KRT73	0.774	1
KRAS	RIPK4	0.774	1
MPP7	Del_8p23.3	0.774	1
NF1	Del_4p16.3	0.774	1
SLC27A5	10q-Del	0.774	1
TP53	Amp_20q13.33	0.774	1
Amp_6q12	Del_1p36.31	0.774	1
Amp_17q25.3	Del_10q26.3	0.774	1
Amp_17q25.3	Del_15q21.1	0.774	1
APC	Amp_7q34	0.775	1
C10orf54	NGF	0.775	1
C10orf54	OR6C74	0.775	1
C10orf54	RQCD1	0.775	1
CAMTA1	11q-Del	0.775	1
CBL	CDK4	0.775	1
CBL	OXA1L	0.775	1
CBL	PTPN11	0.775	1
CBL	S100A8	0.775	1
CDK4	NGF	0.775	1
CDK4	OR6C74	0.775	1
CDK4	RB1	0.775	1
CDK4	RQCD1	0.775	1
FLT1	11p-Del	0.775	1
NGF	NUDT11	0.775	1
NGF	PTPN11	0.775	1
NUDT11	OR6C74	0.775	1
NUDT11	RB1	0.775	1
NUDT11	RQCD1	0.775	1
OR4S2	Del_5q31.3	0.775	1
OR6C74	PTPN11	0.775	1
OR6C74	S100A8	0.775	1
OXA1L	RB1	0.775	1
OXA1L	RQCD1	0.775	1
PTPN11	RB1	0.775	1
RB1	S100A8	0.775	1
RQCD1	S100A8	0.775	1
ACSBG1	Del_6q26	0.776	1
APC	Del_5q12.1	0.776	1
APCS	6q-Del	0.776	1
C7orf58	Del_5p15.31	0.776	1
CBL	FRMPD4	0.776	1
CBL	MYO3B	0.776	1
CYP3A5	6q-Del	0.776	1
DMC1	SLC9A11	0.776	1
FRMPD4	OR6C74	0.776	1
FRMPD4	RB1	0.776	1
FRMPD4	RQCD1	0.776	1
HRAS	Del_10p15.3	0.776	1
IGF1R	6q-Del	0.776	1
IGF1R	Del_6q26	0.776	1
NBPF1	Amp_8q24.21	0.776	1
POTEG	Amp_8q24.21	0.776	1
RAC1	Amp_8q24.21	0.776	1
SLC38A4	Del_6q21	0.776	1
SYK	Del_6q26	0.776	1
7q-Amp	6p-Del	0.776	1
8p-Amp	14q-Del	0.776	1
Amp_6p24.3	Amp_12q15	0.776	1
ACSBG1	RAC1	0.777	1
APC	KRTAP5-10	0.777	1
APCS	Amp_6q12	0.777	1
BTK	11p-Del	0.777	1
CPA3	Del_19p13.3	0.777	1
CTNNA3	Amp_17q25.3	0.777	1
CTNNA3	Del_4p16.3	0.777	1
CYP3A4	CYP3A5	0.777	1
CYP3A4	Del_19p13.3	0.777	1
CYP3A5	LGR6	0.777	1
DDX3X	Del_3q13.31	0.777	1
DSG3	Amp_12q15	0.777	1
IDH1	TP53	0.777	1
IGF1R	RAC1	0.777	1
KRTAP5-10	Del_5p15.31	0.777	1
LGR6	SYK	0.777	1
MSTN	8p-Amp	0.777	1
MSTN	Del_5p15.31	0.777	1
MYO3B	Del_6q26	0.777	1
PPP6C	SYK	0.777	1
RAC1	Del_19p13.3	0.777	1
SLC27A5	TRERF1	0.777	1
SLC27A5	Del_5p15.31	0.777	1
SYK	Amp_6q12	0.777	1
TP53	Amp_4q12	0.777	1
ZNF780B	8p-Amp	0.777	1
11p-Del	Amp_4q12	0.777	1
11p-Del	Amp_12q15	0.777	1
Amp_3p13	Del_1p22.1	0.777	1
Amp_6q12	Del_3q13.31	0.777	1
ANO4	Del_9p23	0.778	1
APCS	C7orf58	0.778	1
APCS	14q-Del	0.778	1
ARID2	CYP3A5	0.778	1
ARID2	IGF1R	0.778	1
CBL	Amp_1q44	0.778	1
COL3A1	9p-Del	0.778	1
CYP3A5	14q-Del	0.778	1
IGF1R	14q-Del	0.778	1
IGF1R	Del_5q12.1	0.778	1
KCND2	Del_15q13.3	0.778	1
KYNU	Del_6q21	0.778	1
MPP7	ZFX	0.778	1
MPP7	Amp_12q15	0.778	1
NUP214	Amp_17q25.3	0.778	1
RB1	Del_6q21	0.778	1
RPTN	10q-Del	0.778	1
SELP	Del_9p23	0.778	1
SYK	14q-Del	0.778	1
USH2A	9q-Del	0.778	1
ZFX	Del_1p22.1	0.778	1
5q-Del	Amp_7p22.1	0.778	1
Amp_4q12	Del_4p16.3	0.778	1
Amp_12q15	Del_1p22.1	0.778	1
BRAF	KYNU	0.779	1
CCNA1	Amp_5p15.33	0.779	1
CDC42BPA	1q-Amp	0.779	1
CDC42BPA	17p-Del	0.779	1
CYP3A4	11p-Del	0.779	1
DSG3	PPP6C	0.779	1
DSG3	RAC1	0.779	1
EPHA4	16q-Del	0.779	1
EZH2	Amp_5p15.33	0.779	1
GLI1	17p-Del	0.779	1
GLI1	Amp_5p15.33	0.779	1
GUCY2F	7p-Amp	0.779	1
KIT	20q-Amp	0.779	1
KRT73	1q-Amp	0.779	1
NRAS	Amp_6q12	0.779	1
POTEG	7p-Amp	0.779	1
PPP6C	11p-Del	0.779	1
RAC1	11p-Del	0.779	1
RIPK4	1q-Amp	0.779	1
RIPK4	Amp_5p15.33	0.779	1
13q-Amp	7p-Amp	0.779	1
7p-Amp	Del_2q37.3	0.779	1
17p-Del	Del_16q23.1	0.779	1
C10orf28	KRTAP5-10	0.78	1
C10orf28	SLC27A5	0.78	1
C10orf28	ZNF780B	0.78	1
EMG1	KRTAP5-10	0.78	1
EMG1	MSTN	0.78	1
EMG1	SLC27A5	0.78	1
EMG1	ZNF780B	0.78	1
EMG1	14q-Del	0.78	1
EMG1	Del_5q12.1	0.78	1
EZH2	Amp_1q44	0.78	1
KRT73	Amp_1q44	0.78	1
MPP7	RELN	0.78	1
OR4S2	Del_16q12.1	0.78	1
USH2A	Amp_13q31.3	0.78	1
USP9X	Del_16q12.1	0.78	1
BRAF	TP63	0.781	1
CTNNB1	Del_9p23	0.781	1
DSG3	KRTAP5-10	0.781	1
KCND2	10q-Del	0.781	1
NRAS	OR4S2	0.781	1
Amp_7p22.1	Del_3q13.31	0.781	1
ATP5F1	Del_16q23.1	0.782	1
C15orf23	NAP1L2	0.782	1
CAMTA1	GUCY2F	0.782	1
COL3A1	Amp_22q13.2	0.782	1
COL3A1	Del_8p23.3	0.782	1
CTNNB1	MAP2K1	0.782	1
CTNNB1	Amp_15q26.2	0.782	1
EMG1	Del_10q26.3	0.782	1
GNAQ	Del_16q23.1	0.782	1
KRAS	Del_16q23.1	0.782	1
MAP2K1	Amp_15q26.2	0.782	1
OR4S2	Del_12q23.3	0.782	1
PARM1	PTEN	0.782	1
SELP	1q-Amp	0.782	1
TP63	Del_10q26.3	0.782	1
USP9X	Del_12q23.3	0.782	1
USP9X	Del_13q34	0.782	1
ALPK2	Del_16q12.1	0.783	1
C10orf54	USH2A	0.783	1
C10orf54	Del_1p22.1	0.783	1
CDK4	USH2A	0.783	1
COL3A1	Del_9p23	0.783	1
FAM58A	Amp_1q44	0.783	1
GNAQ	Amp_1q44	0.783	1
IDH1	OR4S2	0.783	1
IDH1	TPTE	0.783	1
IDH1	USP9X	0.783	1
KRTAP5-10	Amp_7p22.1	0.783	1
MAN1A1	OR4S2	0.783	1
MPP7	NUDT11	0.783	1
MPP7	PTPN11	0.783	1
NUDT11	Del_4p16.3	0.783	1
OR4S2	Amp_4q12	0.783	1
OR4S2	Amp_12q15	0.783	1
OXA1L	Amp_17q25.3	0.783	1
OXA1L	Del_4p16.3	0.783	1
OXA1L	Del_10q21.1	0.783	1
PTPN11	Amp_17q25.3	0.783	1
S100A8	Del_4p16.3	0.783	1
TPTE	9p-Del	0.783	1
USH2A	Amp_6p24.3	0.783	1
USP9X	ZFX	0.783	1
USP9X	Amp_4q12	0.783	1
Amp_6p24.3	Del_10q21.1	0.783	1
C10orf54	1q-Amp	0.784	1
OR4S2	Del_Xp21.1	0.784	1
OXA1L	1q-Amp	0.784	1
S100A8	1q-Amp	0.784	1
TPTE	5q-Del	0.784	1
USP9X	Del_Xp21.1	0.784	1
20q-Amp	Amp_3p13	0.784	1
CAMTA1	11p-Del	0.785	1
CBL	EPHA6	0.785	1
CYP3A5	Amp_8q24.21	0.785	1
EPHA6	OR6C74	0.785	1
HRAS	NRAS	0.785	1
MAN1A1	Amp_1q44	0.785	1
MYO16	Amp_1q21.3	0.785	1
NRAS	STK19	0.785	1
PTEN	TP53	0.785	1
SELP	6p-Amp	0.785	1
TP63	Del_19p13.3	0.785	1
Amp_1q21.3	Amp_5p15.33	0.785	1
Amp_1q44	Amp_4q12	0.785	1
GML	Del_16q23.1	0.787	1
GUCY2F	Del_16q24.3	0.787	1
PARM1	Del_16q24.3	0.787	1
POTEG	5q-Del	0.787	1
STK19	Del_16p13.3	0.787	1
TTN	9p-Del	0.787	1
USH2A	13q-Amp	0.787	1
USP17L2	Del_4p16.3	0.787	1
20p-Amp	5q-Del	0.787	1
Amp_13q31.3	Del_1p22.1	0.787	1
ALPK2	IDH1	0.788	1
ALPK2	ZFX	0.788	1
CBL	Del_13q34	0.788	1
CCNA1	6p-Del	0.788	1
CPA3	1q-Amp	0.788	1
CTNNB1	6p-Amp	0.788	1
DDX3X	1q-Amp	0.788	1
EPHA6	Amp_20q13.33	0.788	1
FGFR2	8p-Amp	0.788	1
GLI1	6p-Del	0.788	1
GLI1	Amp_11q13.3	0.788	1
KIT	6p-Del	0.788	1
KIT	Amp_11q13.3	0.788	1
MAP2K1	SLC9A11	0.788	1
MSTN	Del_11q23.3	0.788	1
NBPF1	8p-Amp	0.788	1
NGF	Del_13q34	0.788	1
OR6C74	Del_13q34	0.788	1
PARM1	Del_5q12.1	0.788	1
PDGFRA	POTEG	0.788	1
PDGFRA	20p-Amp	0.788	1
RIPK4	6p-Del	0.788	1
RQCD1	Del_12q23.3	0.788	1
TPTE	Del_Xp21.1	0.788	1
XIRP2	9q-Del	0.788	1
13q-Amp	14q-Del	0.788	1
7p-Amp	Del_Xp21.1	0.788	1
8p-Amp	18p-Del	0.788	1
18p-Del	Del_5p15.31	0.788	1
9q-Del	Amp_22q13.2	0.788	1
Amp_12q15	Amp_20q13.33	0.788	1
Del_2q37.3	Del_5p15.31	0.788	1
C10orf28	KEL	0.789	1
CAMTA1	7q-Amp	0.789	1
EMG1	FLT1	0.789	1
EMG1	Del_1p36.31	0.789	1
HRAS	Amp_13q31.3	0.789	1
KYNU	Del_9p21.3	0.789	1
NF1	Del_8p23.3	0.789	1
TRERF1	Del_16p13.3	0.789	1
Amp_1p12	Del_16p13.3	0.789	1
Amp_15q26.2	Del_9p21.3	0.789	1
APCS	Del_1p36.31	0.79	1
APCS	Del_4q34.3	0.79	1
BRAF	NBPF1	0.79	1
CDKN2A	FRMPD4	0.79	1
CPA3	5q-Del	0.79	1
CYP3A4	5q-Del	0.79	1
CYP3A5	KEL	0.79	1
FAM58A	RPTN	0.79	1
FRMPD4	Amp_7q34	0.79	1
GNAQ	Del_16q12.1	0.79	1
KRAS	RPTN	0.79	1
KRAS	Del_16q12.1	0.79	1
PTEN	SLC27A5	0.79	1
SLC27A5	22q-Amp	0.79	1
SYK	Del_4q34.3	0.79	1
Amp_1p12	Del_5q12.1	0.79	1
ATP5F1	DMC1	0.791	1
ATP5F1	GML	0.791	1
CCK	DMC1	0.791	1
CCNA1	Del_15q13.3	0.791	1
DMC1	FAM58A	0.791	1
DMC1	GNAQ	0.791	1
DMC1	KRAS	0.791	1
EPHA7	Del_1p36.31	0.791	1
EZH2	Del_15q13.3	0.791	1
KRTAP5-10	Amp_20q13.33	0.791	1
MLL	Del_1p36.31	0.791	1
MLL	Del_4q34.3	0.791	1
MYO16	Del_1p36.31	0.791	1
POTEG	6p-Amp	0.791	1
RIPK4	Amp_1p12	0.791	1
SELP	Del_1p36.31	0.791	1
SELP	Del_4q34.3	0.791	1
SLC27A5	Amp_20q13.33	0.791	1
SLC27A5	Amp_22q13.2	0.791	1
XIRP2	Amp_12q15	0.791	1
ZNF780B	Amp_20q13.33	0.791	1
ZNF780B	Amp_22q13.2	0.791	1
20q-Amp	Del_1p36.31	0.791	1
6p-Amp	18p-Del	0.791	1
Amp_7p22.1	Del_5q31.3	0.791	1
APC	Del_9p21.3	0.792	1
COL3A1	NUDT11	0.792	1
COL3A1	S100A8	0.792	1
MYO16	THSD7B	0.792	1
PTPN11	11q-Del	0.792	1
TTN	Del_11q23.3	0.792	1
ALPK2	PPP6C	0.793	1
C7orf58	Del_4p16.3	0.793	1
CDKN2A	OR4S2	0.793	1
COL3A1	KYNU	0.793	1
COL3A1	Amp_15q26.2	0.793	1
CPA3	Del_9p23	0.793	1
CTNNB1	11q-Del	0.793	1
CYP3A4	Amp_22q13.2	0.793	1
DDX3X	Amp_22q13.2	0.793	1
FRMPD4	KYNU	0.793	1
FRMPD4	Amp_15q26.2	0.793	1
KYNU	6q-Del	0.793	1
MYO3B	Amp_15q26.2	0.793	1
PPP6C	Amp_22q13.2	0.793	1
RAC1	Amp_20q13.33	0.793	1
RAC1	Amp_22q13.2	0.793	1
TPTE	7p-Amp	0.793	1
11q-Del	Amp_15q26.2	0.793	1
Amp_6q12	Amp_20q13.33	0.793	1
Amp_6q12	Amp_22q13.2	0.793	1
Amp_6q12	Del_9p23	0.793	1
ACSBG1	C15orf23	0.794	1
APCS	GUCY2F	0.794	1
APCS	13q-Amp	0.794	1
C15orf23	CYP3A5	0.794	1
CYP3A5	13q-Amp	0.794	1
GUCY2F	IGF1R	0.794	1
GUCY2F	SYK	0.794	1
HRAS	10p-Del	0.794	1
IGF1R	PARM1	0.794	1
KEL	Del_5p15.31	0.794	1
PDGFRA	Del_1p36.31	0.794	1
PTPN22	Del_1p36.31	0.794	1
PTPN22	Del_4q34.3	0.794	1
RELN	20q-Amp	0.794	1
SYK	13q-Amp	0.794	1
Amp_1p12	Del_3q13.31	0.794	1
Amp_5p15.33	Del_6q21	0.794	1
Amp_22q13.2	Del_4q34.3	0.794	1
Del_6q26	Del_15q21.1	0.794	1
COL3A1	Amp_8q24.21	0.795	1
DDX3X	10q-Del	0.795	1
EPHA4	MYO16	0.795	1
EPHA4	Amp_13q31.3	0.795	1
MYO16	Amp_11q13.3	0.795	1
Amp_11q13.3	Amp_13q31.3	0.795	1
COL3A1	Del_10q23.31	0.796	1
CTNNB1	Del_Xp21.1	0.796	1
EPHA4	Del_10q23.31	0.796	1
KYNU	9p-Del	0.796	1
KYNU	Del_Xp21.1	0.796	1
MAP2K1	Del_Xp21.1	0.796	1
20q-Amp	Del_10p15.3	0.796	1
9p-Del	Amp_15q26.2	0.796	1
Amp_15q26.2	Del_Xp21.1	0.796	1
C10orf54	CDK4	0.797	1
C10orf54	NUDT11	0.797	1
C10orf54	PTPN11	0.797	1
C10orf54	S100A8	0.797	1
CDK4	NUDT11	0.797	1
CDK4	OXA1L	0.797	1
CDK4	PTPN11	0.797	1
CDK4	S100A8	0.797	1
CTNNB1	Del_10q21.1	0.797	1
DMC1	RPTN	0.797	1
EPHA7	11q-Del	0.797	1
HRAS	6p-Del	0.797	1
HRAS	Amp_11q13.3	0.797	1
NUDT11	OXA1L	0.797	1
NUDT11	PTPN11	0.797	1
NUDT11	S100A8	0.797	1
OXA1L	S100A8	0.797	1
USH2A	Amp_15q26.2	0.797	1
Amp_1q21.3	Del_10q26.3	0.797	1
BRAF	RPTN	0.798	1
C10orf28	5q-Del	0.798	1
CDKN2A	FAM58A	0.798	1
CDKN2A	GNAQ	0.798	1
EMG1	5q-Del	0.798	1
EPHA6	18p-Del	0.798	1
EZH2	7q-Amp	0.798	1
MLL	Amp_6p24.3	0.798	1
OR4S2	20p-Amp	0.798	1
PARM1	Amp_1q21.3	0.798	1
RPTN	16q-Del	0.798	1
RPTN	Del_12q23.3	0.798	1
RPTN	Del_13q34	0.798	1
USP9X	Del_2q37.3	0.798	1
Amp_1q44	Amp_11q13.3	0.798	1
Del_13q34	Del_14q23.3	0.798	1
C10orf54	7q-Amp	0.799	1
C7orf58	Amp_8q24.21	0.799	1
CDK4	7q-Amp	0.799	1
FRMPD4	Del_4p16.3	0.799	1
MYO16	6q-Del	0.799	1
PTPN11	7q-Amp	0.799	1
RPTN	Del_10q21.1	0.799	1
7q-Amp	Del_15q21.1	0.799	1
C10orf28	CBL	0.8	1
C10orf28	OR6C74	0.8	1
C10orf28	RB1	0.8	1
CAMTA1	Amp_20q13.33	0.8	1
CAMTA1	Amp_22q13.2	0.8	1
CBL	DCLK3	0.8	1
CBL	EMG1	0.8	1
CBL	NBPF1	0.8	1
CNTN5	STK19	0.8	1
DCLK3	RQCD1	0.8	1
EMG1	NGF	0.8	1
EMG1	OR6C74	0.8	1
EMG1	RB1	0.8	1
EMG1	RQCD1	0.8	1
FGFR2	NGF	0.8	1
FGFR2	OR6C74	0.8	1
GUCY2F	Del_19p13.3	0.8	1
NBPF1	NGF	0.8	1
NBPF1	RB1	0.8	1
NGF	20p-Amp	0.8	1
OR6C74	POTEG	0.8	1
OR6C74	20p-Amp	0.8	1
PARM1	Del_19p13.3	0.8	1
POTEG	RQCD1	0.8	1
PTEN	Amp_22q13.2	0.8	1
RB1	20p-Amp	0.8	1
RB1	18p-Del	0.8	1
RB1	Del_2q37.3	0.8	1
RQCD1	20p-Amp	0.8	1
TP63	6p-Amp	0.8	1
13q-Amp	Del_3q13.31	0.8	1
17p-Del	Del_16q12.1	0.8	1
Amp_5p15.33	Del_16q12.1	0.8	1
Amp_12q15	Del_11q23.3	0.8	1
Del_6q21	Del_16p13.3	0.8	1
ALPK2	7q-Amp	0.801	1
CTNNB1	Del_16q23.1	0.801	1
DMC1	USP17L2	0.801	1
GML	USP17L2	0.801	1
GML	Amp_13q31.3	0.801	1
KYNU	Del_16q23.1	0.801	1
MYO16	Del_12q23.3	0.801	1
MYO3B	7q-Amp	0.801	1
POTEG	Amp_6p24.3	0.801	1
SELP	Del_12q23.3	0.801	1
20q-Amp	6q-Del	0.801	1
Amp_1p12	Del_16q23.1	0.801	1
Amp_6p24.3	Del_2q37.3	0.801	1
CCNA1	NF1	0.802	1
CCNA1	Del_15q21.1	0.802	1
CDC42BPA	Del_8p23.3	0.802	1
CYP3A5	THSD7B	0.802	1
EZH2	Del_15q21.1	0.802	1
GLI1	Del_15q21.1	0.802	1
IGF1R	THSD7B	0.802	1
POTEG	Amp_7p22.1	0.802	1
RIPK4	Del_8p23.3	0.802	1
RIPK4	Del_15q21.1	0.802	1
1q-Amp	Amp_7q34	0.802	1
9p-Del	Del_15q21.1	0.802	1
Amp_1p12	Amp_3p13	0.802	1
APCS	Amp_7p22.1	0.803	1
BRAF	MLL	0.803	1
BTK	MAP2K1	0.803	1
CCNA1	CPA3	0.803	1
CCNA1	RAC1	0.803	1
CDC42BPA	DDX3X	0.803	1
CPA3	EZH2	0.803	1
CTNNB1	MAN1A1	0.803	1
CTNNB1	Amp_12q15	0.803	1
CYP3A5	Amp_7p22.1	0.803	1
DDX3X	KRT73	0.803	1
DDX3X	RIPK4	0.803	1
EPHA6	Amp_6p24.3	0.803	1
EZH2	LGR6	0.803	1
EZH2	Amp_6q12	0.803	1
GLI1	LGR6	0.803	1
GLI1	PPP6C	0.803	1
IDH1	KYNU	0.803	1
IGF1R	5q-Del	0.803	1
KCND2	Amp_13q31.3	0.803	1
KIT	LGR6	0.803	1
KIT	RAC1	0.803	1
KIT	Amp_6q12	0.803	1
KYNU	ZFX	0.803	1
MAP2K1	Amp_12q15	0.803	1
NRAS	TP63	0.803	1
TP63	9q-Del	0.803	1
TP63	Amp_1q21.3	0.803	1
Amp_12q14.1	Del_8p23.3	0.803	1
C10orf54	Amp_3p13	0.804	1
IDH1	RELN	0.804	1
KYNU	Del_10q23.31	0.804	1
MPP7	Amp_7q34	0.804	1
MSTN	Del_19p13.3	0.804	1
NUDT11	Amp_3p13	0.804	1
RELN	ZFX	0.804	1
SLC27A5	Del_3q13.31	0.804	1
ZNF780B	Del_3q13.31	0.804	1
ZNF780B	Del_19p13.3	0.804	1
Del_3q13.31	Del_9p23	0.804	1
CPA3	16q-Del	0.805	1
DCLK3	16q-Del	0.805	1
DDX3X	XIRP2	0.805	1
POTEG	16q-Del	0.805	1
RAC1	16q-Del	0.805	1
TPTE	Amp_7p22.1	0.805	1
ANO4	PPP6C	0.806	1
ATP5F1	20q-Amp	0.806	1
ATP5F1	17p-Del	0.806	1
CAMTA1	Del_16p13.3	0.806	1
CCK	20q-Amp	0.806	1
CCK	17p-Del	0.806	1
CPA3	HRAS	0.806	1
CTNNA3	Amp_12q15	0.806	1
CYP3A4	HRAS	0.806	1
DDX3X	HRAS	0.806	1
FAM58A	MLL	0.806	1
FAM58A	17p-Del	0.806	1
GNAQ	MLL	0.806	1
GNAQ	17p-Del	0.806	1
HRAS	PPP6C	0.806	1
HRAS	RAC1	0.806	1
HSD11B1	OR4S2	0.806	1
KRAS	MLL	0.806	1
KRAS	17p-Del	0.806	1
MLL	OR4S2	0.806	1
PTEN	Amp_12q14.1	0.806	1
C10orf54	Del_5q31.3	0.807	1
CNTN5	PTEN	0.807	1
DCLK3	Del_16q23.1	0.807	1
FAM58A	Amp_7q34	0.807	1
FRMPD4	20q-Amp	0.807	1
NGF	Amp_7q34	0.807	1
OR6C74	Amp_7q34	0.807	1
RQCD1	Amp_7q34	0.807	1
13q-Amp	Del_10p15.3	0.807	1
APC	PTPN22	0.808	1
APC	TRERF1	0.808	1
BTK	Del_Xp21.1	0.808	1
CAMTA1	20p-Amp	0.808	1
CDC42BPA	Del_5q31.3	0.808	1
CDKN2A	DMC1	0.808	1
CTNNB1	Del_13q34	0.808	1
KIT	Del_5q31.3	0.808	1
KYNU	Del_12q23.3	0.808	1
KYNU	Del_13q34	0.808	1
MAN1A1	Del_Xp21.1	0.808	1
MYO16	Del_6q26	0.808	1
NAP1L2	18p-Del	0.808	1
NUP214	Del_Xp21.1	0.808	1
PTEN	Del_2q37.3	0.808	1
PTPN22	TRERF1	0.808	1
PTPN22	8p-Amp	0.808	1
RIPK4	Del_5q31.3	0.808	1
ZFX	Del_Xp21.1	0.808	1
13q-Amp	6q-Del	0.808	1
8p-Amp	Del_5p15.31	0.808	1
6q-Del	Amp_1q21.3	0.808	1
Amp_4q12	Del_Xp21.1	0.808	1
Amp_12q15	Del_Xp21.1	0.808	1
Amp_15q26.2	Del_13q34	0.808	1
ATP5F1	SLC27A5	0.809	1
BRAF	COL3A1	0.809	1
C7orf58	Del_15q21.1	0.809	1
CCK	KRTAP5-10	0.809	1
CCK	SLC27A5	0.809	1
CCK	ZNF780B	0.809	1
CDK4	NRAS	0.809	1
FAM58A	KRTAP5-10	0.809	1
FAM58A	SLC27A5	0.809	1
FAM58A	ZNF780B	0.809	1
GNAQ	KRTAP5-10	0.809	1
GNAQ	MSTN	0.809	1
GNAQ	SLC27A5	0.809	1
HSD11B1	Del_4p16.3	0.809	1
KRAS	KRTAP5-10	0.809	1
KRAS	ZNF780B	0.809	1
MPP7	6p-Amp	0.809	1
PTEN	Del_6q21	0.809	1
Del_5q12.1	Del_15q21.1	0.809	1
EPHA7	5q-Del	0.81	1
GLI1	10q-Del	0.81	1
HRAS	Amp_1q44	0.81	1
IGF1R	Del_10q21.1	0.81	1
PDGFRA	Del_9p23	0.81	1
TPTE	11q-Del	0.81	1
Amp_6p24.3	Del_10q23.31	0.81	1
APC	TPTE	0.811	1
APCS	Del_16p13.3	0.811	1
BRAF	KRT73	0.811	1
CDKN2A	Del_9p21.3	0.811	1
EPHA4	Del_1p22.1	0.811	1
EPHA4	Del_4p16.3	0.811	1
OR6C74	8q-Amp	0.811	1
PPP6C	7q-Amp	0.811	1
RPTN	7q-Amp	0.811	1
RQCD1	Del_16q24.3	0.811	1
SYK	Amp_12q14.1	0.811	1
SYK	Del_16p13.3	0.811	1
TRERF1	7p-Amp	0.811	1
6p-Del	Del_4p16.3	0.811	1
Amp_11q13.3	Del_4p16.3	0.811	1
Del_3q13.31	Del_13q34	0.811	1
APC	CBL	0.812	1
APC	OR6C74	0.812	1
APC	RB1	0.812	1
CBL	TRERF1	0.812	1
CBL	Del_5p15.31	0.812	1
DSG3	PARM1	0.812	1
GUCY2F	TP53	0.812	1
KEL	Del_4p16.3	0.812	1
NGF	TRERF1	0.812	1
NGF	Del_5p15.31	0.812	1
NRAS	USH2A	0.812	1
OR6C74	PTPN22	0.812	1
OR6C74	8p-Amp	0.812	1
OR6C74	Del_5p15.31	0.812	1
PARM1	11p-Del	0.812	1
PDGFRA	RB1	0.812	1
RB1	TRERF1	0.812	1
RB1	8p-Amp	0.812	1
RQCD1	8p-Amp	0.812	1
13q-Amp	11p-Del	0.812	1
Amp_17q25.3	Del_1p36.31	0.812	1
ARID2	KIT	0.813	1
BRAF	Del_4q34.3	0.813	1
C7orf58	CCNA1	0.813	1
C7orf58	EZH2	0.813	1
C7orf58	KIT	0.813	1
C7orf58	RIPK4	0.813	1
CCNA1	14q-Del	0.813	1
CCNA1	Del_5q12.1	0.813	1
CTNNB1	Del_16q12.1	0.813	1
EZH2	Del_5q12.1	0.813	1
FAM58A	Amp_1q21.3	0.813	1
GLI1	Del_5q12.1	0.813	1
KIT	Del_5q12.1	0.813	1
KRT73	Del_5q12.1	0.813	1
MAP2K1	RPTN	0.813	1
OR4S2	Del_5p15.31	0.813	1
POTEG	Amp_1q44	0.813	1
RIPK4	14q-Del	0.813	1
RIPK4	Amp_7q34	0.813	1
RPTN	Amp_15q26.2	0.813	1
SELP	7q-Amp	0.813	1
TPTE	Amp_13q31.3	0.813	1
20q-Amp	5q-Del	0.813	1
Amp_1q44	Del_2q37.3	0.813	1
ATP5F1	Amp_1p12	0.814	1
CBL	Amp_1q21.3	0.814	1
CCK	Amp_1p12	0.814	1
CYP3A4	Del_11q23.3	0.814	1
DSG3	HSD11B1	0.814	1
EPHA6	Del_4q34.3	0.814	1
FAM58A	Del_15q13.3	0.814	1
GNAQ	Amp_1p12	0.814	1
KRAS	Amp_1p12	0.814	1
KYNU	Del_10p15.3	0.814	1
NGF	9q-Del	0.814	1
TP63	Del_12q23.3	0.814	1
7p-Amp	Del_15q21.1	0.814	1
Amp_6q12	Del_11q23.3	0.814	1
ARID2	Del_6q21	0.815	1
C10orf54	FRMPD4	0.815	1
C15orf23	HRAS	0.815	1
CDK4	FRMPD4	0.815	1
CPA3	Amp_13q31.3	0.815	1
DMC1	EPHA4	0.815	1
EPHA6	Del_11q23.3	0.815	1
EPHA7	Del_16q24.3	0.815	1
FRMPD4	PTPN11	0.815	1
GML	6p-Del	0.815	1
GML	Amp_11q13.3	0.815	1
GUCY2F	HRAS	0.815	1
HRAS	PARM1	0.815	1
HRAS	13q-Amp	0.815	1
IGF1R	16q-Del	0.815	1
PPP6C	USP17L2	0.815	1
PPP6C	Amp_13q31.3	0.815	1
SELP	Amp_6p24.3	0.815	1
SELP	Del_16q24.3	0.815	1
SYK	16q-Del	0.815	1
9q-Del	Amp_6p24.3	0.815	1
Amp_1q21.3	Del_15q13.3	0.815	1
Amp_6q12	Amp_13q31.3	0.815	1
Del_10q23.31	Del_13q34	0.815	1
COL3A1	Del_12q23.3	0.816	1
17p-Del	Amp_8q24.21	0.816	1
Amp_11q13.3	Del_16q23.1	0.816	1
Del_5q12.1	Del_16p13.3	0.816	1
C10orf28	MYO16	0.817	1
C10orf28	7p-Amp	0.817	1
C10orf28	10q-Del	0.817	1
C15orf23	5q-Del	0.817	1
EMG1	EPHA7	0.817	1
EMG1	SELP	0.817	1
EMG1	SLC38A4	0.817	1
EMG1	10q-Del	0.817	1
22q-Amp	Del_4q34.3	0.817	1
5q-Del	Amp_20q13.33	0.817	1
GML	MLL	0.818	1
GML	Amp_5p15.33	0.818	1
MYO3B	11p-Del	0.818	1
USH2A	Del_19p13.3	0.818	1
7p-Amp	Amp_12q14.1	0.818	1
7p-Amp	Del_16p13.3	0.818	1
C15orf23	CCNA1	0.819	1
C15orf23	CDC42BPA	0.819	1
C15orf23	RIPK4	0.819	1
CDKN2A	MLL	0.819	1
EZH2	PARM1	0.819	1
GLI1	GUCY2F	0.819	1
GLI1	13q-Amp	0.819	1
GNAQ	6q-Del	0.819	1
KIT	13q-Amp	0.819	1
KRAS	6q-Del	0.819	1
OR4S2	Del_15q13.3	0.819	1
RIPK4	13q-Amp	0.819	1
SLC27A5	SLC9A11	0.819	1
Amp_17q25.3	Del_12q23.3	0.819	1
Del_4p16.3	Del_13q34	0.819	1
ANO4	7p-Amp	0.82	1
C10orf28	C10orf54	0.82	1
C10orf28	CDK4	0.82	1
C10orf28	NUDT11	0.82	1
C10orf28	OXA1L	0.82	1
C10orf28	PTPN11	0.82	1
C10orf28	S100A8	0.82	1
C10orf54	EMG1	0.82	1
CNTN5	Del_11q23.3	0.82	1
CPA3	SLC38A4	0.82	1
DDX3X	EPHA7	0.82	1
DDX3X	SELP	0.82	1
EMG1	NUDT11	0.82	1
EMG1	OXA1L	0.82	1
EMG1	PTPN11	0.82	1
EMG1	S100A8	0.82	1
EPHA6	OR4S2	0.82	1
FRMPD4	ZFX	0.82	1
FRMPD4	Amp_12q15	0.82	1
HSD11B1	Del_Xp21.1	0.82	1
KYNU	Del_10q26.3	0.82	1
LGR6	SELP	0.82	1
MYO16	PPP6C	0.82	1
MYO16	RAC1	0.82	1
MYO16	Amp_6q12	0.82	1
PPP6C	Del_6q21	0.82	1
RELN	Del_15q13.3	0.82	1
STK19	Del_Xp21.1	0.82	1
7q-Amp	Del_Xp21.1	0.82	1
Amp_1p12	Del_16q12.1	0.82	1
Amp_3p13	Amp_13q31.3	0.82	1
ACSBG1	Del_6q21	0.821	1
CBL	6q-Del	0.821	1
CCK	Del_8p23.3	0.821	1
GNAQ	Del_8p23.3	0.821	1
HSD11B1	KCND2	0.821	1
IGF1R	Del_6q21	0.821	1
KRAS	Del_15q21.1	0.821	1
MAN1A1	Amp_7q34	0.821	1
RB1	6q-Del	0.821	1
SYK	Del_6q21	0.821	1
8q-Amp	Del_16q23.1	0.821	1
Amp_4q12	Amp_7q34	0.821	1
BTK	IDH1	0.822	1
BTK	ZFX	0.822	1
CDKN2A	10p-Del	0.822	1
CNTN5	KRTAP5-10	0.822	1
CNTN5	SLC27A5	0.822	1
EPHA7	Del_2q37.3	0.822	1
IDH1	ZFX	0.822	1
IDH1	Amp_4q12	0.822	1
IDH1	Amp_12q15	0.822	1
KRTAP5-10	THSD7B	0.822	1
NBPF1	SLC38A4	0.822	1
NRAS	Del_5q12.1	0.822	1
NUP214	Amp_4q12	0.822	1
SELP	18p-Del	0.822	1
SELP	Del_2q37.3	0.822	1
TTN	1q-Amp	0.822	1
ZFX	6p-Amp	0.822	1
13q-Amp	Del_6q26	0.822	1
6p-Amp	Amp_4q12	0.822	1
Amp_6p24.3	Del_1p36.31	0.822	1
Amp_12q14.1	Del_3q13.31	0.822	1
Del_6q26	Del_Xp21.1	0.822	1
CAMTA1	NGF	0.823	1
CAMTA1	RB1	0.823	1
CTNNB1	DCLK3	0.823	1
CTNNB1	POTEG	0.823	1
CTNNB1	Del_2q37.3	0.823	1
CYP3A4	Del_5q31.3	0.823	1
FAM58A	Del_6q26	0.823	1
GNAQ	Del_6q26	0.823	1
KYNU	20p-Amp	0.823	1
KYNU	Del_2q37.3	0.823	1
MAN1A1	1q-Amp	0.823	1
NAP1L2	NGF	0.823	1
NAP1L2	OR6C74	0.823	1
NAP1L2	RB1	0.823	1
NBPF1	Amp_15q26.2	0.823	1
NGF	22q-Amp	0.823	1
OR6C74	PTEN	0.823	1
OR6C74	22q-Amp	0.823	1
PPP6C	Del_5q31.3	0.823	1
PTEN	RB1	0.823	1
RQCD1	22q-Amp	0.823	1
ZFX	1q-Amp	0.823	1
7p-Amp	8q-Amp	0.823	1
18p-Del	Amp_15q26.2	0.823	1
C7orf58	7q-Amp	0.824	1
CAMTA1	Amp_1q21.3	0.824	1
CCK	Amp_8q24.21	0.824	1
CDKN2A	CTNNB1	0.824	1
CDKN2A	MAP2K1	0.824	1
EZH2	Del_1p36.31	0.824	1
EZH2	Del_4q34.3	0.824	1
GLI1	Del_4q34.3	0.824	1
HSD11B1	Amp_15q26.2	0.824	1
KEL	Del_11q23.3	0.824	1
KIT	Del_1p36.31	0.824	1
KRT73	Del_4q34.3	0.824	1
NAP1L2	Amp_1q21.3	0.824	1
RIPK4	Del_4q34.3	0.824	1
TPTE	Del_11q23.3	0.824	1
TTN	7p-Amp	0.824	1
22q-Amp	9q-Del	0.824	1
ALPK2	HSD11B1	0.825	1
ARID2	Del_3q13.31	0.825	1
BRAF	9q-Del	0.825	1
CCNA1	Del_11q23.3	0.825	1
CDK4	Del_12q23.3	0.825	1
HRAS	Amp_12q14.1	0.825	1
HRAS	Del_16p13.3	0.825	1
NUDT11	Del_12q23.3	0.825	1
NUDT11	Del_13q34	0.825	1
OXA1L	Del_12q23.3	0.825	1
OXA1L	Del_13q34	0.825	1
S100A8	Del_13q34	0.825	1
TP63	11p-Del	0.825	1
11q-Del	Amp_17q25.3	0.825	1
Del_3q13.31	Del_5q12.1	0.825	1
APCS	EPHA7	0.826	1
ATP5F1	CBL	0.826	1
ATP5F1	NGF	0.826	1
ATP5F1	RB1	0.826	1
ATP5F1	RQCD1	0.826	1
C10orf28	MPP7	0.826	1
C10orf28	Amp_17q25.3	0.826	1
C10orf28	Del_4p16.3	0.826	1
CBL	CCK	0.826	1
CBL	GNAQ	0.826	1
CCK	NGF	0.826	1
CCK	OR6C74	0.826	1
CCK	RB1	0.826	1
CCK	RQCD1	0.826	1
CYP3A5	SELP	0.826	1
EMG1	MPP7	0.826	1
EMG1	Del_1p22.1	0.826	1
EPHA4	Del_10q21.1	0.826	1
FAM58A	NGF	0.826	1
FAM58A	OR6C74	0.826	1
FAM58A	RQCD1	0.826	1
GNAQ	NGF	0.826	1
GNAQ	OR6C74	0.826	1
GNAQ	RB1	0.826	1
GUCY2F	NRAS	0.826	1
IGF1R	SLC38A4	0.826	1
KRAS	NGF	0.826	1
KRAS	OR6C74	0.826	1
KRAS	RQCD1	0.826	1
NRAS	PARM1	0.826	1
1q-Amp	17p-Del	0.826	1
1q-Amp	Amp_5p15.33	0.826	1
CBL	DSG3	0.827	1
CBL	TP53	0.827	1
DSG3	NGF	0.827	1
GML	1q-Amp	0.827	1
HRAS	Del_9p21.3	0.827	1
HSD11B1	TPTE	0.827	1
PTPN22	22q-Amp	0.827	1
RB1	TP53	0.827	1
RQCD1	TP53	0.827	1
RQCD1	11p-Del	0.827	1
STK19	Amp_6p24.3	0.827	1
TRERF1	22q-Amp	0.827	1
20p-Amp	Del_6q21	0.827	1
ACSBG1	OR4S2	0.828	1
C10orf28	Del_11q23.3	0.828	1
C7orf58	14q-Del	0.828	1
EMG1	Del_11q23.3	0.828	1
EPHA7	16q-Del	0.828	1
FRMPD4	Amp_8q24.21	0.828	1
OR6C74	Amp_8q24.21	0.828	1
POTEG	Del_19p13.3	0.828	1
SELP	16q-Del	0.828	1
SLC27A5	Del_16q23.1	0.828	1
SYK	USP9X	0.828	1
USP9X	Amp_6p24.3	0.828	1
ZNF780B	Del_16q23.1	0.828	1
Amp_1p12	Amp_6p24.3	0.828	1
Amp_6p24.3	Del_15q13.3	0.828	1
ARID2	CCK	0.829	1
ARID2	KRAS	0.829	1
C7orf58	CCK	0.829	1
C7orf58	FAM58A	0.829	1
C7orf58	GNAQ	0.829	1
CAMTA1	Del_11q23.3	0.829	1
CCNA1	6q-Del	0.829	1
DDX3X	DMC1	0.829	1
DDX3X	GML	0.829	1
DMC1	LGR6	0.829	1
DMC1	Amp_6q12	0.829	1
DSG3	Del_10p15.3	0.829	1
FAM58A	Del_5q12.1	0.829	1
GLI1	6q-Del	0.829	1
GML	RAC1	0.829	1
GNAQ	Del_5q12.1	0.829	1
KIT	6q-Del	0.829	1
KRT73	6q-Del	0.829	1
KRTAP5-10	USH2A	0.829	1
KRTAP5-10	Amp_13q31.3	0.829	1
MSTN	USH2A	0.829	1
NAP1L2	USP9X	0.829	1
OR4S2	PTEN	0.829	1
SLC27A5	USH2A	0.829	1
SLC27A5	Amp_13q31.3	0.829	1
USP9X	22q-Amp	0.829	1
22q-Amp	Del_11q23.3	0.829	1
Del_4q34.3	Del_8p23.3	0.829	1
Del_4q34.3	Del_15q21.1	0.829	1
BTK	9q-Del	0.83	1
C10orf28	RELN	0.83	1
TPTE	6q-Del	0.83	1
17p-Del	Del_12q23.3	0.83	1
17p-Del	Del_13q34	0.83	1
5q-Del	Amp_1p12	0.83	1
5q-Del	Del_1p22.1	0.83	1
CYP3A5	TP63	0.831	1
CYP3A5	Del_16q24.3	0.831	1
DDX3X	6p-Amp	0.831	1
HRAS	9q-Del	0.831	1
IGF1R	TP63	0.831	1
IGF1R	Del_16q24.3	0.831	1
KYNU	NRAS	0.831	1
NBPF1	1q-Amp	0.831	1
OR4S2	Del_8p23.3	0.831	1
OR4S2	Del_15q21.1	0.831	1
RAC1	6p-Amp	0.831	1
SYK	Del_16q24.3	0.831	1
TPTE	7q-Amp	0.831	1
USP9X	Del_8p23.3	0.831	1
5q-Del	Amp_1q21.3	0.831	1
Amp_1q21.3	Del_10q23.31	0.831	1
Amp_7q34	Del_10q21.1	0.831	1
ACSBG1	Del_Xp21.1	0.832	1
BRAF	KRTAP5-10	0.832	1
BRAF	Amp_3p13	0.832	1
COL3A1	Amp_4q12	0.832	1
CYP3A5	Del_Xp21.1	0.832	1
IGF1R	Del_Xp21.1	0.832	1
KCND2	Del_4q34.3	0.832	1
MYO3B	Amp_20q13.33	0.832	1
11q-Del	Amp_4q12	0.832	1
CPA3	6p-Del	0.833	1
CPA3	Amp_11q13.3	0.833	1
EPHA4	Amp_6q12	0.833	1
EPHA7	Del_11q23.3	0.833	1
MAN1A1	Del_13q34	0.833	1
MYO16	Del_11q23.3	0.833	1
16q-Del	17p-Del	0.833	1
6p-Del	Amp_6q12	0.833	1
Amp_4q12	Del_13q34	0.833	1
Amp_12q15	Del_13q34	0.833	1
CCNA1	Del_16p13.3	0.834	1
CPA3	Del_1p22.1	0.834	1
CTNNA3	HSD11B1	0.834	1
DDX3X	Del_1p22.1	0.834	1
GLI1	Amp_12q14.1	0.834	1
GLI1	Del_16p13.3	0.834	1
HRAS	OR4S2	0.834	1
KIT	Amp_12q14.1	0.834	1
KIT	Del_16p13.3	0.834	1
KRT73	Del_16p13.3	0.834	1
LGR6	MPP7	0.834	1
MPP7	PPP6C	0.834	1
POTEG	Del_10p15.3	0.834	1
20p-Amp	Del_10p15.3	0.834	1
ALPK2	CBL	0.835	1
ALPK2	RB1	0.835	1
ANO4	STK19	0.835	1
C10orf28	KCND2	0.835	1
CBL	Del_3q13.31	0.835	1
CCNA1	5q-Del	0.835	1
CDK4	FGFR2	0.835	1
CDK4	NBPF1	0.835	1
CDK4	POTEG	0.835	1
CDK4	18p-Del	0.835	1
CTNNA3	FRMPD4	0.835	1
EMG1	KCND2	0.835	1
FGFR2	PTPN11	0.835	1
FRMPD4	Amp_13q31.3	0.835	1
KIT	5q-Del	0.835	1
MYO3B	Amp_13q31.3	0.835	1
NBPF1	S100A8	0.835	1
NGF	Amp_20q13.33	0.835	1
NGF	Amp_22q13.2	0.835	1
NUDT11	Del_2q37.3	0.835	1
OR6C74	Amp_20q13.33	0.835	1
OR6C74	Del_19p13.3	0.835	1
OXA1L	POTEG	0.835	1
POTEG	PTPN11	0.835	1
RB1	Amp_20q13.33	0.835	1
RB1	Del_19p13.3	0.835	1
RQCD1	Amp_22q13.2	0.835	1
RQCD1	Del_19p13.3	0.835	1
S100A8	20p-Amp	0.835	1
S100A8	18p-Del	0.835	1
TRERF1	Amp_7p22.1	0.835	1
7q-Amp	8q-Amp	0.835	1
Amp_3p13	Del_10q23.31	0.835	1
CCNA1	Amp_8q24.21	0.836	1
CDC42BPA	Amp_8q24.21	0.836	1
CDKN2A	SLC38A4	0.836	1
CTNNB1	20q-Amp	0.836	1
GLI1	Amp_8q24.21	0.836	1
KIT	Amp_8q24.21	0.836	1
KYNU	MLL	0.836	1
KYNU	20q-Amp	0.836	1
6p-Amp	11p-Del	0.836	1
Del_10q26.3	Del_13q34	0.836	1
APC	CTNNB1	0.837	1
APC	MAP2K1	0.837	1
APC	Amp_15q26.2	0.837	1
ATP5F1	Del_1p36.31	0.837	1
C15orf23	Amp_7p22.1	0.837	1
CCK	KEL	0.837	1
CDKN2A	NBPF1	0.837	1
CDKN2A	18p-Del	0.837	1
CTNNB1	PTPN22	0.837	1
FAM58A	FLT1	0.837	1
FAM58A	Del_4q34.3	0.837	1
GNAQ	Del_1p36.31	0.837	1
KEL	KRAS	0.837	1
KRAS	Del_1p36.31	0.837	1
KRTAP5-10	RPTN	0.837	1
KRTAP5-10	Del_16q12.1	0.837	1
KYNU	Del_5p15.31	0.837	1
MAP2K1	PTPN22	0.837	1
MSTN	RPTN	0.837	1
PDGFRA	Amp_15q26.2	0.837	1
PTPN22	Amp_15q26.2	0.837	1
SELP	Del_10q26.3	0.837	1
SLC27A5	Del_16q12.1	0.837	1
TPTE	Del_10q26.3	0.837	1
ZNF780B	Del_14q23.3	0.837	1
ZNF780B	Del_16q12.1	0.837	1
13q-Amp	Amp_7p22.1	0.837	1
6q-Del	Amp_6p24.3	0.837	1
ACSBG1	MPP7	0.838	1
ACSBG1	Del_4p16.3	0.838	1
APCS	Amp_17q25.3	0.838	1
DDX3X	9p-Del	0.838	1
KRTAP5-10	Del_6q26	0.838	1
MPP7	7q-Amp	0.838	1
SYK	Amp_17q25.3	0.838	1
SYK	Del_1p22.1	0.838	1
1q-Amp	6q-Del	0.838	1
11p-Del	Amp_7q34	0.838	1
Amp_13q31.3	Del_9p21.3	0.838	1
CDK4	Amp_6p24.3	0.839	1
HRAS	Amp_8q24.21	0.839	1
NBPF1	Del_4p16.3	0.839	1
OXA1L	Amp_6p24.3	0.839	1
POTEG	Del_1p22.1	0.839	1
PPP6C	Amp_1q44	0.839	1
RAC1	Amp_1q44	0.839	1
SELP	7p-Amp	0.839	1
8q-Amp	18p-Del	0.839	1
18p-Del	Del_4p16.3	0.839	1
Amp_12q15	Del_6q21	0.839	1
Amp_17q25.3	Del_9p21.3	0.839	1
Del_2q37.3	Del_4p16.3	0.839	1
Del_3q13.31	Del_4q34.3	0.839	1
CYP3A5	NRAS	0.84	1
FRMPD4	7p-Amp	0.84	1
MYO3B	7p-Amp	0.84	1
CDKN2A	TPTE	0.841	1
IDH1	STK19	0.841	1
MAN1A1	STK19	0.841	1
NGF	Amp_7p22.1	0.841	1
SLC9A11	22q-Amp	0.841	1
STK19	ZFX	0.841	1
8q-Amp	Del_16q12.1	0.841	1
APC	MYO16	0.842	1
APC	SLC38A4	0.842	1
COL3A1	17p-Del	0.842	1
COL3A1	Amp_5p15.33	0.842	1
EMG1	1q-Amp	0.842	1
IGF1R	Del_10q23.31	0.842	1
KRTAP5-10	6p-Del	0.842	1
MPP7	9p-Del	0.842	1
MSTN	6p-Del	0.842	1
SELP	8p-Amp	0.842	1
SLC27A5	6p-Del	0.842	1
TP53	Del_12q23.3	0.842	1
TP53	Del_16p13.3	0.842	1
ZNF780B	Amp_11q13.3	0.842	1
9p-Del	Amp_17q25.3	0.842	1
ANO4	CBL	0.843	1
ANO4	RB1	0.843	1
ANO4	RQCD1	0.843	1
C15orf23	DMC1	0.843	1
CTNNA3	EMG1	0.843	1
CTNNB1	HRAS	0.843	1
DMC1	7q-Amp	0.843	1
EPHA6	EZH2	0.843	1
GML	PARM1	0.843	1
GML	13q-Amp	0.843	1
GML	7q-Amp	0.843	1
HRAS	KYNU	0.843	1
HRAS	MAP2K1	0.843	1
HRAS	Amp_15q26.2	0.843	1
MYO3B	Del_6q21	0.843	1
NF1	Amp_1q21.3	0.843	1
OR4S2	Del_5q12.1	0.843	1
PPP6C	Del_16q23.1	0.843	1
RPTN	6q-Del	0.843	1
USP17L2	Del_15q13.3	0.843	1
9q-Del	Del_8p23.3	0.843	1
Amp_12q15	Del_16q12.1	0.843	1
ACSBG1	MAP2K1	0.844	1
ALPK2	Del_16q24.3	0.844	1
APCS	CTNNB1	0.844	1
APCS	Amp_15q26.2	0.844	1
ATP5F1	C10orf54	0.844	1
ATP5F1	CDK4	0.844	1
ATP5F1	NUDT11	0.844	1
C10orf54	CCK	0.844	1
C10orf54	GNAQ	0.844	1
C10orf54	KRAS	0.844	1
C15orf23	7q-Amp	0.844	1
CAMTA1	22q-Amp	0.844	1
CCK	CDK4	0.844	1
CCK	NUDT11	0.844	1
CCK	OXA1L	0.844	1
CCK	PTPN11	0.844	1
CCK	S100A8	0.844	1
CCNA1	Del_Xp21.1	0.844	1
CDC42BPA	Del_Xp21.1	0.844	1
CDK4	FAM58A	0.844	1
CDK4	GNAQ	0.844	1
CDK4	KRAS	0.844	1
CNTN5	IGF1R	0.844	1
CTNNB1	IGF1R	0.844	1
CTNNB1	SYK	0.844	1
CYP3A5	MAP2K1	0.844	1
CYP3A5	Amp_15q26.2	0.844	1
EZH2	Del_Xp21.1	0.844	1
FAM58A	NUDT11	0.844	1
FAM58A	PTPN11	0.844	1
FAM58A	S100A8	0.844	1
GLI1	Del_Xp21.1	0.844	1
GNAQ	NUDT11	0.844	1
GNAQ	OXA1L	0.844	1
GNAQ	PTPN11	0.844	1
GNAQ	S100A8	0.844	1
GNAQ	5q-Del	0.844	1
GUCY2F	SELP	0.844	1
IGF1R	MAP2K1	0.844	1
KIT	Del_Xp21.1	0.844	1
KRAS	NUDT11	0.844	1
KRAS	PTPN11	0.844	1
KRAS	S100A8	0.844	1
KRAS	5q-Del	0.844	1
KRT73	Del_Xp21.1	0.844	1
MLL	Amp_7p22.1	0.844	1
MSTN	TPTE	0.844	1
MSTN	7p-Amp	0.844	1
RIPK4	Del_Xp21.1	0.844	1
SELP	13q-Amp	0.844	1
SYK	Amp_15q26.2	0.844	1
APC	NUDT11	0.845	1
APC	S100A8	0.845	1
C10orf54	TRERF1	0.845	1
CCNA1	16q-Del	0.845	1
CDK4	PDGFRA	0.845	1
CDKN2A	SLC27A5	0.845	1
EZH2	16q-Del	0.845	1
GLI1	16q-Del	0.845	1
NUDT11	PDGFRA	0.845	1
NUDT11	PTPN22	0.845	1
NUDT11	Del_5p15.31	0.845	1
OXA1L	PTPN22	0.845	1
OXA1L	8p-Amp	0.845	1
OXA1L	Amp_1q44	0.845	1
PDGFRA	PTPN11	0.845	1
PDGFRA	Del_3q13.31	0.845	1
PTPN11	TRERF1	0.845	1
PTPN11	8p-Amp	0.845	1
S100A8	TRERF1	0.845	1
S100A8	Amp_1q44	0.845	1
SELP	TP53	0.845	1
SELP	11p-Del	0.845	1
TRERF1	Del_14q23.3	0.845	1
TRERF1	Del_16q12.1	0.845	1
XIRP2	Del_2q37.3	0.845	1
8p-Amp	Del_3q13.31	0.845	1
8p-Amp	Del_14q23.3	0.845	1
8p-Amp	Del_19p13.3	0.845	1
Del_6q21	Del_Xp21.1	0.845	1
C7orf58	Del_4q34.3	0.846	1
FRMPD4	HSD11B1	0.846	1
MAN1A1	Amp_8q24.21	0.846	1
10q-Del	Amp_17q25.3	0.846	1
Amp_1p12	Amp_22q13.2	0.846	1
ARID2	GML	0.847	1
BTK	POTEG	0.847	1
BTK	18p-Del	0.847	1
C7orf58	DMC1	0.847	1
CCNA1	Del_6q26	0.847	1
CDC42BPA	Del_6q26	0.847	1
DCLK3	Amp_12q15	0.847	1
FGFR2	ZFX	0.847	1
IDH1	POTEG	0.847	1
KYNU	Del_15q13.3	0.847	1
NBPF1	ZFX	0.847	1
NBPF1	9p-Del	0.847	1
NUP214	POTEG	0.847	1
POTEG	ZFX	0.847	1
PTEN	16q-Del	0.847	1
USH2A	Amp_12q15	0.847	1
20p-Amp	Amp_12q15	0.847	1
5q-Del	Del_15q21.1	0.847	1
Amp_12q15	Del_2q37.3	0.847	1
C10orf28	COL3A1	0.848	1
KCND2	5q-Del	0.848	1
6q-Del	Amp_12q14.1	0.848	1
Amp_7q34	Del_19p13.3	0.848	1
BRAF	10p-Del	0.849	1
CCNA1	OR4S2	0.849	1
CNTN5	NRAS	0.849	1
CNTN5	PPP6C	0.849	1
CNTN5	RAC1	0.849	1
CYP3A5	KCND2	0.849	1
CYP3A5	Del_9p23	0.849	1
EZH2	OR4S2	0.849	1
IGF1R	KCND2	0.849	1
IGF1R	TP53	0.849	1
KCND2	SYK	0.849	1
KIT	USP9X	0.849	1
KRT73	USP9X	0.849	1
SYK	TP53	0.849	1
1q-Amp	Del_15q13.3	0.849	1
DDX3X	PPP6C	0.85	1
EZH2	Amp_7p22.1	0.85	1
GLI1	Amp_7p22.1	0.85	1
IDH1	Del_5q31.3	0.85	1
PPP6C	RAC1	0.85	1
11p-Del	Del_15q21.1	0.85	1
Amp_4q12	Del_5q31.3	0.85	1
Amp_12q15	Del_5q31.3	0.85	1
C15orf23	EPHA4	0.851	1
CAMTA1	CTNNB1	0.851	1
CTNNB1	22q-Amp	0.851	1
EPHA4	GUCY2F	0.851	1
FAM58A	Del_6q21	0.851	1
GNAQ	Del_6q21	0.851	1
MAP2K1	22q-Amp	0.851	1
NAP1L2	Amp_15q26.2	0.851	1
NBPF1	17p-Del	0.851	1
USP17L2	Del_13q34	0.851	1
20p-Amp	Amp_5p15.33	0.851	1
7p-Amp	Del_5q31.3	0.851	1
17p-Del	18p-Del	0.851	1
Amp_20q13.33	Del_10q23.31	0.851	1
Amp_22q13.2	Del_10q23.31	0.851	1
CBL	XIRP2	0.852	1
GNAQ	16q-Del	0.852	1
HRAS	IDH1	0.852	1
HRAS	MAN1A1	0.852	1
HRAS	NUP214	0.852	1
HRAS	Amp_4q12	0.852	1
HRAS	Amp_12q15	0.852	1
KRAS	16q-Del	0.852	1
OR6C74	XIRP2	0.852	1
RB1	XIRP2	0.852	1
SELP	17p-Del	0.852	1
6p-Amp	Amp_3p13	0.852	1
Amp_12q14.1	Amp_22q13.2	0.852	1
Amp_17q25.3	Del_10q23.31	0.852	1
C10orf28	THSD7B	0.853	1
EMG1	THSD7B	0.853	1
EPHA6	MAP2K1	0.853	1
TP53	9q-Del	0.853	1
6p-Amp	Amp_20q13.33	0.853	1
9p-Del	Amp_7q34	0.853	1
Amp_11q13.3	Del_9p23	0.853	1
C10orf28	7q-Amp	0.854	1
CDKN2A	MAN1A1	0.854	1
CDKN2A	ZFX	0.854	1
CPA3	MSTN	0.854	1
DDX3X	KRTAP5-10	0.854	1
DDX3X	ZNF780B	0.854	1
HSD11B1	SLC9A11	0.854	1
KRTAP5-10	PPP6C	0.854	1
KRTAP5-10	RAC1	0.854	1
KRTAP5-10	Amp_6q12	0.854	1
LGR6	SLC27A5	0.854	1
MLL	SLC27A5	0.854	1
MSTN	PPP6C	0.854	1
MSTN	17p-Del	0.854	1
NRAS	Del_14q23.3	0.854	1
PPP6C	SLC27A5	0.854	1
SLC27A5	20q-Amp	0.854	1
SLC27A5	17p-Del	0.854	1
SLC9A11	STK19	0.854	1
ZNF780B	20q-Amp	0.854	1
ZNF780B	Amp_5p15.33	0.854	1
ZNF780B	Amp_6q12	0.854	1
20q-Amp	Amp_11q13.3	0.854	1
Amp_7p22.1	Del_1p36.31	0.854	1
Amp_12q14.1	Amp_13q31.3	0.854	1
Amp_13q31.3	Del_16p13.3	0.854	1
ACSBG1	Del_10q26.3	0.855	1
BRAF	Del_5q12.1	0.855	1
C10orf54	NAP1L2	0.855	1
C10orf54	PTEN	0.855	1
CAMTA1	OXA1L	0.855	1
CCK	TTN	0.855	1
CCNA1	MYO16	0.855	1
CCNA1	SELP	0.855	1
CDK4	PTEN	0.855	1
CDK4	22q-Amp	0.855	1
CPA3	RPTN	0.855	1
DDX3X	RPTN	0.855	1
EZH2	MYO16	0.855	1
EZH2	SLC38A4	0.855	1
KCND2	POTEG	0.855	1
KRAS	TTN	0.855	1
NAP1L2	PTPN11	0.855	1
NUDT11	22q-Amp	0.855	1
OXA1L	PTEN	0.855	1
PPP6C	RPTN	0.855	1
PPP6C	Del_16q12.1	0.855	1
RAC1	RPTN	0.855	1
RAC1	Del_16q12.1	0.855	1
RIPK4	SLC38A4	0.855	1
S100A8	22q-Amp	0.855	1
USP9X	Del_4q34.3	0.855	1
7q-Amp	Del_2q37.3	0.855	1
9p-Del	Amp_1p12	0.855	1
Amp_3p13	Del_10q26.3	0.855	1
C15orf23	MPP7	0.856	1
CDKN2A	Amp_17q25.3	0.856	1
DMC1	Del_Xp21.1	0.856	1
GML	Del_4q34.3	0.856	1
GML	Del_Xp21.1	0.856	1
GUCY2F	Del_4p16.3	0.856	1
MLL	7q-Amp	0.856	1
PARM1	Del_4p16.3	0.856	1
TP63	Del_10p15.3	0.856	1
XIRP2	Amp_17q25.3	0.856	1
20p-Amp	Amp_7q34	0.856	1
Del_10q23.31	Del_Xp21.1	0.856	1
ARID2	Del_16q12.1	0.857	1
BRAF	Del_19p13.3	0.857	1
C10orf54	TP63	0.857	1
C7orf58	Del_14q23.3	0.857	1
CBL	USP17L2	0.857	1
CDK4	8q-Amp	0.857	1
CDKN2A	SLC9A11	0.857	1
DSG3	NRAS	0.857	1
GLI1	Del_9p21.3	0.857	1
MPP7	TRERF1	0.857	1
NGF	USP17L2	0.857	1
NGF	Amp_13q31.3	0.857	1
NUDT11	Del_16q24.3	0.857	1
OR6C74	Amp_13q31.3	0.857	1
PDGFRA	Del_4p16.3	0.857	1
RB1	Del_11q23.3	0.857	1
RELN	ZNF780B	0.857	1
RQCD1	USP17L2	0.857	1
9p-Del	Amp_6p24.3	0.857	1
Amp_17q25.3	Del_5p15.31	0.857	1
ACSBG1	Amp_22q13.2	0.858	1
ALPK2	APCS	0.858	1
ALPK2	IGF1R	0.858	1
CBL	6p-Amp	0.858	1
CYP3A5	Amp_20q13.33	0.858	1
KYNU	Del_15q21.1	0.858	1
RB1	6p-Amp	0.858	1
STK19	Del_12q23.3	0.858	1
SYK	Amp_20q13.33	0.858	1
THSD7B	Amp_6q12	0.858	1
1q-Amp	Del_5p15.31	0.858	1
Amp_8q24.21	Del_12q23.3	0.858	1
Amp_15q26.2	Del_8p23.3	0.858	1
APC	CDKN2A	0.859	1
APC	ZFX	0.859	1
APC	Amp_4q12	0.859	1
APC	Amp_12q15	0.859	1
ATP5F1	SELP	0.859	1
BRAF	OXA1L	0.859	1
BTK	PTPN22	0.859	1
BTK	TRERF1	0.859	1
CCK	MYO16	0.859	1
CCK	SLC38A4	0.859	1
CDKN2A	8p-Amp	0.859	1
EPHA7	FAM58A	0.859	1
EPHA7	GNAQ	0.859	1
FAM58A	MYO16	0.859	1
GNAQ	MYO16	0.859	1
GNAQ	SLC38A4	0.859	1
IDH1	PTPN22	0.859	1
MAN1A1	8p-Amp	0.859	1
NUP214	PDGFRA	0.859	1
PDGFRA	ZFX	0.859	1
PDGFRA	Amp_12q15	0.859	1
PTPN22	ZFX	0.859	1
TRERF1	ZFX	0.859	1
ZFX	Del_5p15.31	0.859	1
8p-Amp	Amp_4q12	0.859	1
Del_4q34.3	Del_16q24.3	0.859	1
Del_8p23.3	Del_12q23.3	0.859	1
ACSBG1	IDH1	0.86	1
ACSBG1	ZFX	0.86	1
APCS	MAN1A1	0.86	1
APCS	ZFX	0.86	1
BTK	IGF1R	0.86	1
BTK	SYK	0.86	1
C10orf28	Del_5q31.3	0.86	1
CTNNA3	IGF1R	0.86	1
CYP3A5	NUP214	0.86	1
CYP3A5	Amp_3p13	0.86	1
CYP3A5	Amp_4q12	0.86	1
CYP3A5	Amp_12q15	0.86	1
IDH1	IGF1R	0.86	1
IGF1R	Amp_4q12	0.86	1
MAP2K1	TTN	0.86	1
NUP214	SYK	0.86	1
SYK	Amp_4q12	0.86	1
20q-Amp	Del_10q21.1	0.86	1
CAMTA1	MYO16	0.861	1
Del_1p36.31	Del_5q31.3	0.861	1
CCK	CNTN5	0.862	1
HRAS	STK19	0.862	1
KRTAP5-10	Amp_1p12	0.862	1
ATP5F1	C10orf28	0.863	1
ATP5F1	EMG1	0.863	1
C10orf28	FAM58A	0.863	1
C10orf28	GNAQ	0.863	1
C10orf28	KRAS	0.863	1
CCK	EMG1	0.863	1
DMC1	Amp_7q34	0.863	1
EMG1	FAM58A	0.863	1
EMG1	GNAQ	0.863	1
EMG1	KRAS	0.863	1
MPP7	SELP	0.863	1
PTEN	RELN	0.863	1
SELP	Del_1p22.1	0.863	1
SELP	Del_4p16.3	0.863	1
SLC9A11	5q-Del	0.863	1
TP63	8p-Amp	0.863	1
7p-Amp	17p-Del	0.863	1
7p-Amp	Amp_5p15.33	0.863	1
14q-Del	5q-Del	0.863	1
Del_10q26.3	Del_Xp21.1	0.863	1
CCNA1	CTNNB1	0.864	1
CCNA1	KYNU	0.864	1
CCNA1	MAP2K1	0.864	1
CDC42BPA	CTNNB1	0.864	1
CTNNB1	GLI1	0.864	1
CTNNB1	KRT73	0.864	1
CTNNB1	RIPK4	0.864	1
CTNNB1	Del_3q13.31	0.864	1
EZH2	MAP2K1	0.864	1
EZH2	USH2A	0.864	1
EZH2	Amp_15q26.2	0.864	1
GLI1	MAP2K1	0.864	1
GLI1	Amp_15q26.2	0.864	1
KIT	KYNU	0.864	1
KIT	MAP2K1	0.864	1
KIT	Amp_15q26.2	0.864	1
KRT73	KYNU	0.864	1
KRT73	Amp_15q26.2	0.864	1
KYNU	RIPK4	0.864	1
MAN1A1	17p-Del	0.864	1
MAP2K1	RIPK4	0.864	1
MLL	NUP214	0.864	1
MPP7	7p-Amp	0.864	1
RIPK4	Amp_15q26.2	0.864	1
TP53	20p-Amp	0.864	1
20p-Amp	11p-Del	0.864	1
20q-Amp	Amp_12q15	0.864	1
7p-Amp	Del_4p16.3	0.864	1
7q-Amp	9q-Del	0.864	1
Amp_20q13.33	Del_8p23.3	0.864	1
CCNA1	Del_1p22.1	0.865	1
CDC42BPA	Del_4p16.3	0.865	1
CDK4	Del_3q13.31	0.865	1
CDK4	Del_19p13.3	0.865	1
DCLK3	Amp_13q31.3	0.865	1
EMG1	Del_9p23	0.865	1
EPHA6	PPP6C	0.865	1
EPHA6	Amp_6q12	0.865	1
EZH2	MPP7	0.865	1
EZH2	Amp_17q25.3	0.865	1
GLI1	Del_1p22.1	0.865	1
GLI1	Del_4p16.3	0.865	1
KIT	Del_1p22.1	0.865	1
KIT	Del_4p16.3	0.865	1
KYNU	10q-Del	0.865	1
MPP7	RIPK4	0.865	1
NBPF1	USP17L2	0.865	1
NUDT11	Del_3q13.31	0.865	1
POTEG	Amp_1p12	0.865	1
POTEG	Del_15q13.3	0.865	1
RIPK4	Amp_17q25.3	0.865	1
20p-Amp	Del_15q13.3	0.865	1
7p-Amp	11p-Del	0.865	1
11p-Del	Amp_13q31.3	0.865	1
18p-Del	Amp_1p12	0.865	1
18p-Del	Del_15q13.3	0.865	1
Amp_1p12	Del_2q37.3	0.865	1
Amp_7p22.1	Del_1p22.1	0.865	1
Amp_7p22.1	Del_4p16.3	0.865	1
Del_6q21	Del_15q21.1	0.865	1
APCS	7p-Amp	0.866	1
ATP5F1	MPP7	0.866	1
C15orf23	MSTN	0.866	1
CCK	MPP7	0.866	1
CDKN2A	CPA3	0.866	1
CDKN2A	CYP3A4	0.866	1
CDKN2A	PPP6C	0.866	1
CYP3A5	TPTE	0.866	1
DDX3X	Del_10q21.1	0.866	1
EPHA4	Amp_1p12	0.866	1
GNAQ	MPP7	0.866	1
GUCY2F	KRTAP5-10	0.866	1
GUCY2F	MSTN	0.866	1
GUCY2F	SLC27A5	0.866	1
KRAS	Del_4p16.3	0.866	1
KRTAP5-10	13q-Amp	0.866	1
MPP7	11p-Del	0.866	1
MPP7	Del_11q23.3	0.866	1
PARM1	SLC27A5	0.866	1
RELN	7q-Amp	0.866	1
RELN	6p-Del	0.866	1
RQCD1	Del_16q23.1	0.866	1
SLC27A5	13q-Amp	0.866	1
20q-Amp	Amp_7q34	0.866	1
5q-Del	Amp_3p13	0.866	1
6p-Del	Del_15q13.3	0.866	1
Amp_1p12	Del_10q23.31	0.866	1
Amp_1q21.3	Del_2q37.3	0.866	1
ANO4	APCS	0.867	1
ANO4	IGF1R	0.867	1
ANO4	Del_12q23.3	0.867	1
C15orf23	CPA3	0.867	1
C15orf23	CYP3A4	0.867	1
DDX3X	GUCY2F	0.867	1
EPHA7	Amp_1p12	0.867	1
GLI1	8q-Amp	0.867	1
GUCY2F	Amp_6q12	0.867	1
KIT	8q-Amp	0.867	1
MYO16	Del_15q13.3	0.867	1
NUDT11	Amp_7q34	0.867	1
PPP6C	13q-Amp	0.867	1
PTEN	Del_16q12.1	0.867	1
13q-Amp	Amp_6q12	0.867	1
16q-Del	Del_3q13.31	0.867	1
ANO4	9p-Del	0.868	1
ARID2	CTNNB1	0.868	1
ARID2	TP53	0.868	1
C10orf28	Del_10p15.3	0.868	1
C7orf58	MAP2K1	0.868	1
C7orf58	USP17L2	0.868	1
C7orf58	Amp_13q31.3	0.868	1
CBL	EPHA4	0.868	1
CBL	Amp_11q13.3	0.868	1
EPHA4	NGF	0.868	1
EPHA4	OR6C74	0.868	1
KRTAP5-10	Del_Xp21.1	0.868	1
MSTN	Del_Xp21.1	0.868	1
MYO3B	Del_12q23.3	0.868	1
NGF	Amp_11q13.3	0.868	1
OR6C74	Amp_11q13.3	0.868	1
PARM1	Del_16q23.1	0.868	1
RB1	6p-Del	0.868	1
SLC27A5	Del_Xp21.1	0.868	1
ZNF780B	Del_Xp21.1	0.868	1
6p-Del	Amp_12q14.1	0.868	1
Del_5p15.31	Del_6q21	0.868	1
C10orf28	DCLK3	0.869	1
C10orf28	POTEG	0.869	1
C10orf28	20p-Amp	0.869	1
C10orf54	9p-Del	0.869	1
CTNNB1	Amp_6p24.3	0.869	1
DCLK3	EMG1	0.869	1
EMG1	FGFR2	0.869	1
EMG1	20p-Amp	0.869	1
GML	9q-Del	0.869	1
HSD11B1	POTEG	0.869	1
KCND2	13q-Amp	0.869	1
POTEG	STK19	0.869	1
ACSBG1	FRMPD4	0.87	1
CDKN2A	9p-Del	0.87	1
CYP3A5	FRMPD4	0.87	1
FRMPD4	IGF1R	0.87	1
IGF1R	MYO3B	0.87	1
KRTAP5-10	Del_6q21	0.87	1
MLL	MPP7	0.87	1
MSTN	Del_8p23.3	0.87	1
NUDT11	TP53	0.87	1
S100A8	TP53	0.87	1
S100A8	11p-Del	0.87	1
SLC27A5	Del_8p23.3	0.87	1
ZNF780B	Del_8p23.3	0.87	1
20p-Amp	Amp_3p13	0.87	1
22q-Amp	Amp_6p24.3	0.87	1
7p-Amp	Del_19p13.3	0.87	1
Amp_5p15.33	Del_4p16.3	0.87	1
BTK	PTEN	0.871	1
CAMTA1	ZFX	0.871	1
CAMTA1	Amp_4q12	0.871	1
CYP3A5	HRAS	0.871	1
GNAQ	Del_10q26.3	0.871	1
HRAS	SYK	0.871	1
IDH1	PTEN	0.871	1
NUP214	22q-Amp	0.871	1
PTEN	ZFX	0.871	1
PTEN	Amp_12q15	0.871	1
20q-Amp	Del_8p23.3	0.871	1
20q-Amp	Del_15q21.1	0.871	1
22q-Amp	Amp_4q12	0.871	1
11p-Del	Del_Xp21.1	0.871	1
Amp_7q34	Del_16q24.3	0.871	1
BRAF	IGF1R	0.872	1
BRAF	SYK	0.872	1
C10orf54	9q-Del	0.872	1
C7orf58	Del_10q26.3	0.872	1
CDK4	Amp_1q21.3	0.872	1
IDH1	Del_9p21.3	0.872	1
KCND2	PDGFRA	0.872	1
MYO16	Del_6q21	0.872	1
NUDT11	9q-Del	0.872	1
OR4S2	Amp_13q31.3	0.872	1
OXA1L	9q-Del	0.872	1
OXA1L	Amp_1q21.3	0.872	1
S100A8	Amp_1q21.3	0.872	1
USP9X	Amp_13q31.3	0.872	1
1q-Amp	Del_10q26.3	0.872	1
Amp_1q21.3	Del_9p23	0.872	1
Amp_4q12	Del_10q26.3	0.872	1
Amp_12q15	Del_9p21.3	0.872	1
C7orf58	Del_13q34	0.873	1
CNTN5	16q-Del	0.873	1
OR6C74	RPTN	0.873	1
OR6C74	Del_16q12.1	0.873	1
RAC1	Amp_7q34	0.873	1
RB1	Del_14q23.3	0.873	1
RPTN	RQCD1	0.873	1
RQCD1	Del_16q12.1	0.873	1
7q-Amp	11p-Del	0.873	1
Amp_1p12	Amp_12q15	0.873	1
Amp_4q12	Del_15q13.3	0.873	1
Del_6q26	Del_16p13.3	0.873	1
ATP5F1	KCND2	0.874	1
FRMPD4	Amp_6q12	0.874	1
GNAQ	KCND2	0.874	1
MYO3B	PPP6C	0.874	1
MYO3B	Amp_6q12	0.874	1
SELP	Del_9p21.3	0.874	1
20q-Amp	6p-Amp	0.874	1
6p-Amp	Amp_5p15.33	0.874	1
7q-Amp	Amp_12q14.1	0.874	1
7q-Amp	Del_16p13.3	0.874	1
GLI1	KCND2	0.875	1
KCND2	KIT	0.875	1
MPP7	PTEN	0.875	1
Amp_7q34	Del_16q23.1	0.875	1
Amp_20q13.33	Del_10q26.3	0.875	1
ALPK2	Del_Xp21.1	0.876	1
CCK	7p-Amp	0.876	1
COL3A1	Amp_20q13.33	0.876	1
CPA3	TPTE	0.876	1
FAM58A	7p-Amp	0.876	1
GNAQ	TPTE	0.876	1
IGF1R	STK19	0.876	1
LGR6	TPTE	0.876	1
MLL	PPP6C	0.876	1
MLL	Amp_6q12	0.876	1
NUDT11	Amp_20q13.33	0.876	1
NUDT11	Amp_22q13.2	0.876	1
OR4S2	16q-Del	0.876	1
OXA1L	Amp_22q13.2	0.876	1
POTEG	6q-Del	0.876	1
USP9X	16q-Del	0.876	1
20p-Amp	6q-Del	0.876	1
20q-Amp	Amp_6q12	0.876	1
7q-Amp	Del_15q13.3	0.876	1
9p-Del	Amp_1q21.3	0.876	1
Amp_22q13.2	Del_Xp21.1	0.876	1
Del_3q13.31	Del_19p13.3	0.876	1
C10orf28	8p-Amp	0.877	1
C10orf28	Del_5p15.31	0.877	1
EMG1	8p-Amp	0.877	1
MLL	9q-Del	0.877	1
MSTN	11q-Del	0.877	1
NF1	Del_2q37.3	0.877	1
NUDT11	6q-Del	0.877	1
TP53	Amp_22q13.2	0.877	1
11p-Del	Amp_20q13.33	0.877	1
17p-Del	Amp_1q21.3	0.877	1
18p-Del	Del_8p23.3	0.877	1
18p-Del	Del_15q21.1	0.877	1
Amp_11q13.3	Del_8p23.3	0.877	1
Amp_11q13.3	Del_15q21.1	0.877	1
Amp_12q14.1	Amp_17q25.3	0.877	1
Amp_12q14.1	Del_4p16.3	0.877	1
ARID2	KRTAP5-10	0.878	1
CAMTA1	CDKN2A	0.878	1
CAMTA1	Amp_1q44	0.878	1
CBL	CYP3A4	0.878	1
CBL	PPP6C	0.878	1
CBL	RAC1	0.878	1
CCNA1	IDH1	0.878	1
CCNA1	MAN1A1	0.878	1
CCNA1	ZFX	0.878	1
CCNA1	Amp_12q15	0.878	1
CDC42BPA	IDH1	0.878	1
CDC42BPA	ZFX	0.878	1
CDC42BPA	Amp_12q15	0.878	1
CDKN2A	NAP1L2	0.878	1
CDKN2A	22q-Amp	0.878	1
CPA3	NGF	0.878	1
CPA3	RB1	0.878	1
CTNNB1	FLT1	0.878	1
CTNNB1	KEL	0.878	1
CTNNB1	Del_1p36.31	0.878	1
CTNNB1	Del_4q34.3	0.878	1
CTNNB1	Del_11q23.3	0.878	1
CYP3A4	NGF	0.878	1
CYP3A4	RB1	0.878	1
EZH2	ZFX	0.878	1
EZH2	Amp_12q15	0.878	1
FLT1	MAP2K1	0.878	1
GLI1	IDH1	0.878	1
GLI1	Amp_12q15	0.878	1
IDH1	KIT	0.878	1
KEL	KYNU	0.878	1
KEL	MAP2K1	0.878	1
KIT	MAN1A1	0.878	1
KIT	NUP214	0.878	1
KRTAP5-10	Del_16p13.3	0.878	1
LGR6	NGF	0.878	1
LGR6	RB1	0.878	1
MAN1A1	RIPK4	0.878	1
MSTN	Del_5q12.1	0.878	1
NGF	RAC1	0.878	1
OR6C74	Amp_6q12	0.878	1
PPP6C	RB1	0.878	1
RIPK4	Amp_4q12	0.878	1
RIPK4	Amp_12q15	0.878	1
SLC27A5	Del_16p13.3	0.878	1
ZNF780B	14q-Del	0.878	1
13q-Amp	Del_14q23.3	0.878	1
8q-Amp	Amp_5p15.33	0.878	1
16q-Del	Amp_6p24.3	0.878	1
5q-Del	Del_1p36.31	0.878	1
Amp_5p15.33	Del_16q24.3	0.878	1
Amp_7p22.1	Del_13q34	0.878	1
Amp_15q26.2	Del_11q23.3	0.878	1
Amp_22q13.2	Del_4p16.3	0.878	1
CDKN2A	Amp_8q24.21	0.879	1
CTNNB1	Del_16q24.3	0.879	1
DMC1	EPHA6	0.879	1
EPHA7	Del_19p13.3	0.879	1
MAP2K1	TP63	0.879	1
PDGFRA	Amp_13q31.3	0.879	1
USP17L2	8p-Amp	0.879	1
USP9X	Amp_20q13.33	0.879	1
USP9X	Amp_22q13.2	0.879	1
7q-Amp	8p-Amp	0.879	1
Amp_13q31.3	Del_5p15.31	0.879	1
APC	HSD11B1	0.88	1
CYP3A5	RELN	0.88	1
DSG3	Del_9p21.3	0.88	1
PDGFRA	STK19	0.88	1
SLC27A5	9p-Del	0.88	1
STK19	Del_5p15.31	0.88	1
Amp_13q31.3	Del_1p36.31	0.88	1
ATP5F1	CCK	0.881	1
ATP5F1	FAM58A	0.881	1
ATP5F1	GNAQ	0.881	1
ATP5F1	KRAS	0.881	1
C15orf23	Amp_3p13	0.881	1
CBL	Del_Xp21.1	0.881	1
CCK	CTNNA3	0.881	1
CCK	FAM58A	0.881	1
CCK	GNAQ	0.881	1
CCK	KRAS	0.881	1
CCK	Amp_3p13	0.881	1
CCNA1	HRAS	0.881	1
CCNA1	Del_6q21	0.881	1
CDKN2A	HSD11B1	0.881	1
CPA3	9q-Del	0.881	1
CTNNA3	FAM58A	0.881	1
CTNNA3	GNAQ	0.881	1
CYP3A4	Del_6q26	0.881	1
CYP3A5	Del_13q34	0.881	1
EZH2	HRAS	0.881	1
FAM58A	GNAQ	0.881	1
GLI1	HRAS	0.881	1
GNAQ	KRAS	0.881	1
GNAQ	Amp_3p13	0.881	1
HRAS	KIT	0.881	1
HRAS	RIPK4	0.881	1
IGF1R	Del_12q23.3	0.881	1
KIT	Del_6q21	0.881	1
KRAS	Amp_3p13	0.881	1
MPP7	NRAS	0.881	1
NGF	Del_Xp21.1	0.881	1
NRAS	8q-Amp	0.881	1
NRAS	Amp_17q25.3	0.881	1
OR6C74	Del_Xp21.1	0.881	1
RB1	Del_Xp21.1	0.881	1
RQCD1	Del_Xp21.1	0.881	1
SYK	Del_13q34	0.881	1
BRAF	Del_5q31.3	0.882	1
C15orf23	PARM1	0.882	1
DSG3	EZH2	0.882	1
DSG3	KIT	0.882	1
EPHA4	Del_2q37.3	0.882	1
MAN1A1	Del_8p23.3	0.882	1
OR6C74	THSD7B	0.882	1
SLC27A5	Amp_6p24.3	0.882	1
20p-Amp	6p-Del	0.882	1
6p-Amp	Amp_12q14.1	0.882	1
18p-Del	6p-Del	0.882	1
Amp_11q13.3	Del_2q37.3	0.882	1
Del_5q31.3	Del_16p13.3	0.882	1
APC	Del_15q13.3	0.883	1
CAMTA1	1q-Amp	0.883	1
CTNNB1	DMC1	0.883	1
CYP3A5	SLC9A11	0.883	1
DMC1	EPHA7	0.883	1
DMC1	KYNU	0.883	1
DMC1	MAP2K1	0.883	1
DMC1	SLC38A4	0.883	1
DMC1	Amp_15q26.2	0.883	1
EMG1	EPHA6	0.883	1
EPHA6	NRAS	0.883	1
EPHA7	GML	0.883	1
GML	KYNU	0.883	1
GML	MYO16	0.883	1
GML	Amp_15q26.2	0.883	1
IGF1R	6p-Amp	0.883	1
NAP1L2	1q-Amp	0.883	1
PPP6C	Del_16p13.3	0.883	1
SELP	Amp_1q21.3	0.883	1
7p-Amp	Del_15q13.3	0.883	1
10q-Del	Del_Xp21.1	0.883	1
Amp_1p12	Del_5p15.31	0.883	1
Amp_1q21.3	Del_5q31.3	0.883	1
Amp_4q12	Del_3q13.31	0.883	1
Amp_12q15	Del_19p13.3	0.883	1
Del_12q23.3	Del_13q34	0.883	1
C10orf54	Amp_13q31.3	0.884	1
C7orf58	Del_10p15.3	0.884	1
CCNA1	CNTN5	0.884	1
CNTN5	KIT	0.884	1
CTNNA3	EZH2	0.884	1
CTNNA3	KIT	0.884	1
GLI1	TTN	0.884	1
GLI1	Amp_3p13	0.884	1
NUDT11	USP17L2	0.884	1
NUDT11	Amp_13q31.3	0.884	1
PTPN11	USP17L2	0.884	1
PTPN11	Amp_13q31.3	0.884	1
RIPK4	Amp_3p13	0.884	1
S100A8	USP17L2	0.884	1
7p-Amp	5q-Del	0.884	1
7p-Amp	9q-Del	0.884	1
8p-Amp	9p-Del	0.884	1
Amp_1q21.3	Del_16q24.3	0.884	1
APC	DSG3	0.885	1
C10orf28	CAMTA1	0.885	1
C10orf28	NAP1L2	0.885	1
C10orf28	22q-Amp	0.885	1
C10orf28	10p-Del	0.885	1
CDKN2A	CNTN5	0.885	1
CDKN2A	Del_9p23	0.885	1
EMG1	NAP1L2	0.885	1
EMG1	10p-Del	0.885	1
FLT1	Del_12q23.3	0.885	1
FLT1	Del_13q34	0.885	1
NRAS	PDGFRA	0.885	1
NRAS	8p-Amp	0.885	1
TP53	Del_5p15.31	0.885	1
USP17L2	Del_5q31.3	0.885	1
8p-Amp	Amp_7q34	0.885	1
10q-Del	Amp_12q14.1	0.885	1
17p-Del	Amp_6p24.3	0.885	1
18p-Del	Amp_8q24.21	0.885	1
Amp_3p13	Del_5p15.31	0.885	1
Amp_5p15.33	Amp_6p24.3	0.885	1
Del_4q34.3	Del_12q23.3	0.885	1
Del_4q34.3	Del_13q34	0.885	1
ARID2	17p-Del	0.886	1
CPA3	Del_12q23.3	0.886	1
DDX3X	Del_13q34	0.886	1
DSG3	Del_1p36.31	0.886	1
DSG3	Del_4q34.3	0.886	1
EPHA6	Del_16q12.1	0.886	1
FAM58A	RELN	0.886	1
GNAQ	RELN	0.886	1
KRTAP5-10	Del_4q34.3	0.886	1
KYNU	TPTE	0.886	1
NF1	Amp_1p12	0.886	1
PPP6C	Del_12q23.3	0.886	1
SLC27A5	Del_1p36.31	0.886	1
SLC27A5	Del_4q34.3	0.886	1
TPTE	Amp_15q26.2	0.886	1
USH2A	Amp_1p12	0.886	1
ZNF780B	Del_4q34.3	0.886	1
7p-Amp	Amp_15q26.2	0.886	1
17p-Del	Del_5q12.1	0.886	1
Amp_1p12	Del_10q21.1	0.886	1
Amp_6p24.3	Del_9p23	0.886	1
Amp_6q12	Del_13q34	0.886	1
Del_3q13.31	Del_14q23.3	0.886	1
Del_3q13.31	Del_16q12.1	0.886	1
ATP5F1	MYO3B	0.887	1
CBL	Amp_5p15.33	0.887	1
CCK	MYO3B	0.887	1
CDKN2A	Del_14q23.3	0.887	1
CPA3	Amp_1p12	0.887	1
EPHA7	USP9X	0.887	1
FAM58A	FRMPD4	0.887	1
FRMPD4	KRAS	0.887	1
KCND2	17p-Del	0.887	1
KRAS	MYO3B	0.887	1
KRT73	NRAS	0.887	1
MLL	RB1	0.887	1
MYO16	OR4S2	0.887	1
NGF	20q-Amp	0.887	1
NGF	Amp_5p15.33	0.887	1
OR4S2	SELP	0.887	1
OR6C74	20q-Amp	0.887	1
RQCD1	USH2A	0.887	1
6q-Del	Amp_20q13.33	0.887	1
CAMTA1	KCND2	0.888	1
CDKN2A	DSG3	0.888	1
EPHA4	Del_5q12.1	0.888	1
NGF	7p-Amp	0.888	1
PDGFRA	Del_11q23.3	0.888	1
RB1	TPTE	0.888	1
RELN	17p-Del	0.888	1
RELN	Del_19p13.3	0.888	1
11p-Del	Amp_11q13.3	0.888	1
Amp_7q34	Del_15q13.3	0.888	1
APC	Del_5q31.3	0.889	1
ARID2	CNTN5	0.889	1
C15orf23	RB1	0.889	1
CBL	PARM1	0.889	1
CPA3	6q-Del	0.889	1
CTNNB1	Amp_13q31.3	0.889	1
HSD11B1	MLL	0.889	1
KYNU	USP17L2	0.889	1
MAP2K1	USP17L2	0.889	1
MAP2K1	Amp_13q31.3	0.889	1
NGF	PARM1	0.889	1
NGF	13q-Amp	0.889	1
OR4S2	TTN	0.889	1
OR6C74	PARM1	0.889	1
OR6C74	13q-Amp	0.889	1
PARM1	RQCD1	0.889	1
PPP6C	6q-Del	0.889	1
SELP	9p-Del	0.889	1
SLC9A11	Del_Xp21.1	0.889	1
Del_11q23.3	Del_Xp21.1	0.889	1
C7orf58	POTEG	0.89	1
DMC1	HRAS	0.89	1
FGFR2	TPTE	0.89	1
GML	HRAS	0.89	1
MLL	NAP1L2	0.89	1
SLC9A11	Del_13q34	0.89	1
22q-Amp	17p-Del	0.89	1
7p-Amp	Del_11q23.3	0.89	1
5q-Del	Del_16q12.1	0.89	1
ACSBG1	NBPF1	0.891	1
ACSBG1	SYK	0.891	1
APCS	FGFR2	0.891	1
APCS	IGF1R	0.891	1
APCS	NBPF1	0.891	1
APCS	SYK	0.891	1
ARID2	Amp_1q44	0.891	1
C7orf58	NUP214	0.891	1
CAMTA1	STK19	0.891	1
CDKN2A	Amp_3p13	0.891	1
CYP3A5	IGF1R	0.891	1
CYP3A5	POTEG	0.891	1
CYP3A5	SYK	0.891	1
CYP3A5	Del_16q23.1	0.891	1
DMC1	MPP7	0.891	1
FGFR2	IGF1R	0.891	1
GML	MPP7	0.891	1
GML	Amp_17q25.3	0.891	1
GML	Del_1p22.1	0.891	1
HSD11B1	NAP1L2	0.891	1
IGF1R	NBPF1	0.891	1
IGF1R	18p-Del	0.891	1
IGF1R	Del_16q23.1	0.891	1
MPP7	Del_19p13.3	0.891	1
NAP1L2	STK19	0.891	1
PTEN	STK19	0.891	1
USP17L2	5q-Del	0.891	1
Amp_4q12	Del_5q12.1	0.891	1
Amp_13q31.3	Del_10q21.1	0.891	1
ANO4	TP53	0.892	1
CCNA1	HSD11B1	0.892	1
CDC42BPA	HSD11B1	0.892	1
COL3A1	PTEN	0.892	1
COL3A1	22q-Amp	0.892	1
DDX3X	TP63	0.892	1
EZH2	HSD11B1	0.892	1
EZH2	STK19	0.892	1
FRMPD4	13q-Amp	0.892	1
GLI1	HSD11B1	0.892	1
GLI1	STK19	0.892	1
GUCY2F	MYO3B	0.892	1
HSD11B1	KRT73	0.892	1
HSD11B1	RIPK4	0.892	1
MYO3B	13q-Amp	0.892	1
NAP1L2	USP17L2	0.892	1
NAP1L2	11q-Del	0.892	1
PTEN	USP17L2	0.892	1
RAC1	Del_16q24.3	0.892	1
1q-Amp	9q-Del	0.892	1
8p-Amp	Del_9p21.3	0.892	1
8q-Amp	Amp_6q12	0.892	1
10q-Del	Amp_6p24.3	0.892	1
BRAF	CCK	0.893	1
C10orf28	Del_3q13.31	0.893	1
CCNA1	FRMPD4	0.893	1
CCNA1	MYO3B	0.893	1
CDK4	Amp_11q13.3	0.893	1
CTNNA3	MYO16	0.893	1
EMG1	Del_3q13.31	0.893	1
EMG1	Del_19p13.3	0.893	1
EPHA4	S100A8	0.893	1
FRMPD4	KIT	0.893	1
FRMPD4	KRT73	0.893	1
KEL	16q-Del	0.893	1
MSTN	5q-Del	0.893	1
NUDT11	6p-Del	0.893	1
NUDT11	Amp_11q13.3	0.893	1
S100A8	Amp_11q13.3	0.893	1
TRERF1	9q-Del	0.893	1
Del_10p15.3	Del_13q34	0.893	1
APC	Del_15q21.1	0.894	1
ARID2	SLC38A4	0.894	1
ATP5F1	Del_13q34	0.894	1
C10orf54	Del_Xp21.1	0.894	1
CBL	Del_15q13.3	0.894	1
CDK4	Del_Xp21.1	0.894	1
COL3A1	HRAS	0.894	1
CYP3A5	1q-Amp	0.894	1
EPHA7	Del_5q12.1	0.894	1
FAM58A	Del_13q34	0.894	1
GNAQ	Del_12q23.3	0.894	1
OR6C74	Del_15q13.3	0.894	1
OXA1L	Del_Xp21.1	0.894	1
PTPN11	Del_Xp21.1	0.894	1
RQCD1	Amp_1p12	0.894	1
RQCD1	Del_15q13.3	0.894	1
S100A8	Del_Xp21.1	0.894	1
6p-Amp	Del_16q24.3	0.894	1
8p-Amp	Del_15q21.1	0.894	1
9p-Del	Amp_11q13.3	0.894	1
Amp_1q44	Del_10q23.31	0.894	1
Amp_3p13	Del_5q31.3	0.894	1
Del_5p15.31	Del_15q21.1	0.894	1
APC	EPHA4	0.895	1
BTK	DMC1	0.895	1
BTK	GML	0.895	1
CCK	1q-Amp	0.895	1
CTNNB1	DSG3	0.895	1
CTNNB1	11p-Del	0.895	1
DMC1	IDH1	0.895	1
DMC1	MAN1A1	0.895	1
DMC1	NUP214	0.895	1
DSG3	Amp_15q26.2	0.895	1
FAM58A	1q-Amp	0.895	1
GML	ZFX	0.895	1
GML	Amp_4q12	0.895	1
GNAQ	1q-Amp	0.895	1
KRTAP5-10	Del_9p21.3	0.895	1
MAP2K1	TP53	0.895	1
MYO3B	16q-Del	0.895	1
OXA1L	6p-Amp	0.895	1
PTPN11	SLC9A11	0.895	1
PTPN22	Amp_11q13.3	0.895	1
PTPN22	Amp_20q13.33	0.895	1
S100A8	6p-Amp	0.895	1
ANO4	EZH2	0.896	1
ANO4	KIT	0.896	1
CYP3A4	Del_8p23.3	0.896	1
DDX3X	Amp_8q24.21	0.896	1
NF1	Amp_17q25.3	0.896	1
NGF	Del_10p15.3	0.896	1
RIPK4	Del_10q23.31	0.896	1
13q-Amp	Amp_12q14.1	0.896	1
13q-Amp	Del_16p13.3	0.896	1
8q-Amp	16q-Del	0.896	1
Amp_6q12	Amp_8q24.21	0.896	1
Amp_6q12	Del_8p23.3	0.896	1
Del_1p22.1	Del_8p23.3	0.896	1
CNTN5	DSG3	0.897	1
CTNNB1	16q-Del	0.897	1
DCLK3	Del_12q23.3	0.897	1
GUCY2F	MLL	0.897	1
MPP7	USP9X	0.897	1
NBPF1	THSD7B	0.897	1
OR4S2	Del_4p16.3	0.897	1
PARM1	17p-Del	0.897	1
RIPK4	10p-Del	0.897	1
TTN	Amp_13q31.3	0.897	1
20p-Amp	Del_13q34	0.897	1
Amp_7q34	Del_1p22.1	0.897	1
APC	FRMPD4	0.898	1
C10orf28	8q-Amp	0.898	1
CCK	XIRP2	0.898	1
CPA3	NBPF1	0.898	1
CYP3A4	USP9X	0.898	1
CYP3A5	Del_14q23.3	0.898	1
CYP3A5	Del_16q12.1	0.898	1
DCLK3	DDX3X	0.898	1
DCLK3	PPP6C	0.898	1
DCLK3	Amp_6q12	0.898	1
EMG1	Del_16q24.3	0.898	1
FAM58A	XIRP2	0.898	1
IGF1R	RPTN	0.898	1
KRAS	XIRP2	0.898	1
LGR6	POTEG	0.898	1
NGF	RELN	0.898	1
POTEG	RAC1	0.898	1
PPP6C	USP9X	0.898	1
RB1	RELN	0.898	1
RPTN	SYK	0.898	1
SELP	Del_10q23.31	0.898	1
TP63	Del_10q21.1	0.898	1
TTN	9q-Del	0.898	1
USP9X	Amp_6q12	0.898	1
XIRP2	Del_12q23.3	0.898	1
7p-Amp	6q-Del	0.898	1
7q-Amp	Del_11q23.3	0.898	1
5q-Del	Del_13q34	0.898	1
6p-Del	Del_1p36.31	0.898	1
9q-Del	Del_15q13.3	0.898	1
Amp_6p24.3	Del_3q13.31	0.898	1
Amp_11q13.3	Del_9p21.3	0.898	1
Amp_12q14.1	Del_11q23.3	0.898	1
Del_11q23.3	Del_16p13.3	0.898	1
Del_14q23.3	Del_Xp21.1	0.898	1
Del_16q12.1	Del_Xp21.1	0.898	1
ATP5F1	11q-Del	0.899	1
CBL	Amp_12q14.1	0.899	1
CCK	COL3A1	0.899	1
COL3A1	KRAS	0.899	1
FRMPD4	Amp_1q21.3	0.899	1
GML	KCND2	0.899	1
NGF	Amp_12q14.1	0.899	1
OR6C74	Amp_12q14.1	0.899	1
OR6C74	Del_16p13.3	0.899	1
RQCD1	Del_16p13.3	0.899	1
10p-Del	Amp_17q25.3	0.899	1
Amp_5p15.33	Amp_8q24.21	0.899	1
Amp_12q14.1	Del_14q23.3	0.899	1
Amp_12q14.1	Del_16q12.1	0.899	1
ACSBG1	APC	0.9	1
APC	CYP3A5	0.9	1
APC	IGF1R	0.9	1
APCS	TRERF1	0.9	1
BTK	Del_4q34.3	0.9	1
CBL	NF1	0.9	1
CBL	Del_8p23.3	0.9	1
CBL	Del_15q21.1	0.9	1
COL3A1	CYP3A5	0.9	1
CYP3A5	PTPN22	0.9	1
CYP3A5	11q-Del	0.9	1
FLT1	ZFX	0.9	1
FLT1	Amp_4q12	0.9	1
FLT1	Amp_12q15	0.9	1
HRAS	MSTN	0.9	1
HRAS	SLC27A5	0.9	1
HRAS	ZNF780B	0.9	1
KEL	6q-Del	0.9	1
KYNU	RELN	0.9	1
MAN1A1	Del_4q34.3	0.9	1
NF1	OR6C74	0.9	1
NGF	Del_8p23.3	0.9	1
NUDT11	Del_16q23.1	0.9	1
OR6C74	Del_8p23.3	0.9	1
OR6C74	Del_15q21.1	0.9	1
PTEN	Del_15q13.3	0.9	1
PTPN22	SYK	0.9	1
RB1	Del_15q21.1	0.9	1
RQCD1	Del_15q21.1	0.9	1
SYK	8p-Amp	0.9	1
TP53	Del_10p15.3	0.9	1
22q-Amp	Amp_3p13	0.9	1
10q-Del	Amp_1q21.3	0.9	1
14q-Del	Amp_1p12	0.9	1
6q-Del	Del_1p36.31	0.9	1
Amp_12q14.1	Del_9p23	0.9	1
Amp_12q15	Del_4q34.3	0.9	1
ATP5F1	NBPF1	0.901	1
ATP5F1	20p-Amp	0.901	1
ATP5F1	18p-Del	0.901	1
ATP5F1	Del_11q23.3	0.901	1
BRAF	CTNNB1	0.901	1
BRAF	MAP2K1	0.901	1
C10orf54	CPA3	0.901	1
C10orf54	LGR6	0.901	1
C10orf54	RAC1	0.901	1
CCK	NBPF1	0.901	1
CCNA1	7p-Amp	0.901	1
CDK4	CYP3A4	0.901	1
CDK4	LGR6	0.901	1
CDKN2A	Amp_20q13.33	0.901	1
CPA3	OXA1L	0.901	1
CTNNB1	KRTAP5-10	0.901	1
CTNNB1	SLC27A5	0.901	1
CYP3A4	OXA1L	0.901	1
CYP3A4	PTPN11	0.901	1
CYP3A4	S100A8	0.901	1
DCLK3	FAM58A	0.901	1
DCLK3	GNAQ	0.901	1
FAM58A	NBPF1	0.901	1
FLT1	MLL	0.901	1
GLI1	7p-Amp	0.901	1
GNAQ	Del_11q23.3	0.901	1
KEL	POTEG	0.901	1
KEL	17p-Del	0.901	1
KRAS	NBPF1	0.901	1
KRAS	Del_2q37.3	0.901	1
KRTAP5-10	MAP2K1	0.901	1
KYNU	SLC27A5	0.901	1
KYNU	Del_9p23	0.901	1
LGR6	PTPN11	0.901	1
MAP2K1	MSTN	0.901	1
MYO16	Amp_6p24.3	0.901	1
NUDT11	PPP6C	0.901	1
NUDT11	RAC1	0.901	1
OXA1L	PPP6C	0.901	1
OXA1L	Amp_6q12	0.901	1
PTEN	7q-Amp	0.901	1
SLC27A5	16q-Del	0.901	1
TPTE	Del_16q24.3	0.901	1
13q-Amp	Del_10q21.1	0.901	1
20p-Amp	Del_4q34.3	0.901	1
20q-Amp	Del_4q34.3	0.901	1
17p-Del	Del_4q34.3	0.901	1
Amp_5p15.33	Del_1p36.31	0.901	1
Amp_15q26.2	Del_9p23	0.901	1
CCNA1	Del_12q23.3	0.902	1
CDKN2A	EPHA6	0.902	1
CYP3A5	Amp_7q34	0.902	1
EMG1	Amp_1q44	0.902	1
GLI1	Del_12q23.3	0.902	1
KIT	Del_12q23.3	0.902	1
KYNU	Amp_7q34	0.902	1
NRAS	USP9X	0.902	1
NRAS	14q-Del	0.902	1
RIPK4	Del_12q23.3	0.902	1
SYK	Del_9p21.3	0.902	1
17p-Del	Amp_3p13	0.902	1
Amp_1p12	Del_9p21.3	0.902	1
Amp_7q34	Amp_15q26.2	0.902	1
ALPK2	KYNU	0.903	1
C15orf23	7p-Amp	0.903	1
C15orf23	Amp_7q34	0.903	1
C15orf23	Del_13q34	0.903	1
CNTN5	17p-Del	0.903	1
FAM58A	7q-Amp	0.903	1
GNAQ	7q-Amp	0.903	1
GUCY2F	Del_12q23.3	0.903	1
TP53	20q-Amp	0.903	1
TP63	Del_10q23.31	0.903	1
TPTE	13q-Amp	0.903	1
20q-Amp	11p-Del	0.903	1
6p-Amp	Del_9p21.3	0.903	1
Amp_15q26.2	Amp_22q13.2	0.903	1
CAMTA1	TP53	0.904	1
DSG3	22q-Amp	0.904	1
NAP1L2	TP53	0.904	1
SLC9A11	USP9X	0.904	1
SLC9A11	Del_11q23.3	0.904	1
TP53	22q-Amp	0.904	1
USP9X	6p-Amp	0.904	1
8q-Amp	Del_19p13.3	0.904	1
Amp_13q31.3	Del_10p15.3	0.904	1
Del_3q13.31	Del_16q24.3	0.904	1
ACSBG1	CDKN2A	0.905	1
ACSBG1	EZH2	0.905	1
ACSBG1	KIT	0.905	1
ANO4	7q-Amp	0.905	1
ANO4	6p-Del	0.905	1
APCS	CDC42BPA	0.905	1
APCS	GLI1	0.905	1
APCS	KRT73	0.905	1
BTK	Amp_6p24.3	0.905	1
BTK	Amp_13q31.3	0.905	1
CCNA1	CYP3A5	0.905	1
CCNA1	IGF1R	0.905	1
CCNA1	SYK	0.905	1
CDC42BPA	CYP3A5	0.905	1
CDKN2A	SYK	0.905	1
CYP3A5	KRT73	0.905	1
CYP3A5	RIPK4	0.905	1
EZH2	IGF1R	0.905	1
IDH1	Amp_13q31.3	0.905	1
IGF1R	KRT73	0.905	1
MAN1A1	8q-Amp	0.905	1
NGF	NRAS	0.905	1
NRAS	RB1	0.905	1
RIPK4	SYK	0.905	1
TP63	ZFX	0.905	1
TRERF1	14q-Del	0.905	1
USP17L2	ZFX	0.905	1
8p-Amp	Del_10q26.3	0.905	1
8q-Amp	Amp_4q12	0.905	1
16q-Del	5q-Del	0.905	1
9q-Del	Amp_17q25.3	0.905	1
Amp_4q12	Amp_6p24.3	0.905	1
ARID2	PPP6C	0.906	1
C10orf28	Del_Xp21.1	0.906	1
C10orf54	RPTN	0.906	1
C7orf58	CYP3A4	0.906	1
CDK4	Del_14q23.3	0.906	1
CDK4	Del_16q12.1	0.906	1
CTNNA3	TPTE	0.906	1
CYP3A5	7q-Amp	0.906	1
EMG1	Del_Xp21.1	0.906	1
EPHA6	POTEG	0.906	1
EPHA7	MAP2K1	0.906	1
FLT1	MYO16	0.906	1
FLT1	SLC38A4	0.906	1
KCND2	NRAS	0.906	1
KYNU	SLC38A4	0.906	1
MAP2K1	SELP	0.906	1
MLL	Del_19p13.3	0.906	1
NUDT11	Del_16q12.1	0.906	1
PTEN	6p-Del	0.906	1
PTPN11	Del_16q12.1	0.906	1
SELP	Amp_15q26.2	0.906	1
SYK	7q-Amp	0.906	1
13q-Amp	Amp_1p12	0.906	1
20q-Amp	Del_3q13.31	0.906	1
Amp_3p13	Del_4p16.3	0.906	1
APC	CCK	0.907	1
APC	GNAQ	0.907	1
APC	KRAS	0.907	1
APCS	9q-Del	0.907	1
ARID2	CBL	0.907	1
ARID2	OR6C74	0.907	1
ARID2	RQCD1	0.907	1
ATP5F1	PTPN22	0.907	1
C7orf58	NGF	0.907	1
CCK	PDGFRA	0.907	1
CCK	TRERF1	0.907	1
CCK	8p-Amp	0.907	1
CCK	Del_5p15.31	0.907	1
CTNNA3	DMC1	0.907	1
CTNNA3	GML	0.907	1
CYP3A5	9q-Del	0.907	1
DMC1	Amp_3p13	0.907	1
EPHA6	Del_1p36.31	0.907	1
FAM58A	PDGFRA	0.907	1
FRMPD4	MYO16	0.907	1
GML	Amp_3p13	0.907	1
GNAQ	PTPN22	0.907	1
GNAQ	TRERF1	0.907	1
KRAS	PDGFRA	0.907	1
KRAS	TRERF1	0.907	1
KRAS	8p-Amp	0.907	1
NBPF1	6p-Amp	0.907	1
NRAS	TPTE	0.907	1
PPP6C	1q-Amp	0.907	1
SLC9A11	Del_2q37.3	0.907	1
20p-Amp	6p-Amp	0.907	1
20q-Amp	Del_Xp21.1	0.907	1
17p-Del	Del_Xp21.1	0.907	1
Amp_5p15.33	Del_Xp21.1	0.907	1
Del_10q21.1	Del_Xp21.1	0.907	1
C10orf28	DSG3	0.908	1
C10orf28	11p-Del	0.908	1
CBL	1q-Amp	0.908	1
CPA3	11p-Del	0.908	1
CYP3A4	TP53	0.908	1
DSG3	Amp_7q34	0.908	1
EPHA7	KRTAP5-10	0.908	1
KRTAP5-10	MYO16	0.908	1
KRTAP5-10	SLC38A4	0.908	1
LGR6	XIRP2	0.908	1
MYO16	ZNF780B	0.908	1
NGF	1q-Amp	0.908	1
RAC1	TP53	0.908	1
SELP	ZNF780B	0.908	1
SLC38A4	ZNF780B	0.908	1
5q-Del	6p-Del	0.908	1
5q-Del	Amp_4q12	0.908	1
5q-Del	Amp_12q15	0.908	1
ACSBG1	22q-Amp	0.909	1
APCS	22q-Amp	0.909	1
C10orf28	USP17L2	0.909	1
C10orf28	Amp_13q31.3	0.909	1
CBL	HRAS	0.909	1
CYP3A4	PTPN22	0.909	1
CYP3A5	NAP1L2	0.909	1
CYP3A5	PTEN	0.909	1
DDX3X	PTPN22	0.909	1
DDX3X	8p-Amp	0.909	1
EMG1	USP17L2	0.909	1
EMG1	Amp_13q31.3	0.909	1
HRAS	NGF	0.909	1
HRAS	OR6C74	0.909	1
HRAS	RB1	0.909	1
HRAS	RQCD1	0.909	1
IGF1R	PTEN	0.909	1
KIT	SLC9A11	0.909	1
KIT	6p-Amp	0.909	1
NAP1L2	SYK	0.909	1
NGF	OR4S2	0.909	1
OR4S2	RQCD1	0.909	1
PPP6C	PTPN22	0.909	1
PTEN	Del_5q31.3	0.909	1
RAC1	TRERF1	0.909	1
7q-Amp	11q-Del	0.909	1
8p-Amp	Amp_6q12	0.909	1
Amp_1q21.3	Del_10q21.1	0.909	1
Amp_7q34	Del_11q23.3	0.909	1
Del_3q13.31	Del_9p21.3	0.909	1
Del_6q26	Del_13q34	0.909	1
ARID2	7q-Amp	0.91	1
C10orf54	GUCY2F	0.91	1
C15orf23	OXA1L	0.91	1
CCNA1	DCLK3	0.91	1
CCNA1	NBPF1	0.91	1
CCNA1	Del_2q37.3	0.91	1
CDC42BPA	POTEG	0.91	1
CDK4	PARM1	0.91	1
CTNNB1	9p-Del	0.91	1
DCLK3	GLI1	0.91	1
EZH2	NBPF1	0.91	1
EZH2	Del_2q37.3	0.91	1
FGFR2	KIT	0.91	1
FGFR2	20p-Amp	0.91	1
GLI1	20p-Amp	0.91	1
GUCY2F	OXA1L	0.91	1
KIT	Del_2q37.3	0.91	1
KRT73	POTEG	0.91	1
KRT73	18p-Del	0.91	1
NBPF1	POTEG	0.91	1
NBPF1	RIPK4	0.91	1
NUDT11	13q-Amp	0.91	1
OR4S2	PARM1	0.91	1
OR4S2	13q-Amp	0.91	1
PDGFRA	Del_13q34	0.91	1
PTEN	Del_15q21.1	0.91	1
PTPN11	13q-Amp	0.91	1
USP9X	13q-Amp	0.91	1
8p-Amp	Del_12q23.3	0.91	1
Del_5p15.31	Del_13q34	0.91	1
C7orf58	9p-Del	0.911	1
CYP3A5	TTN	0.911	1
MYO16	USP17L2	0.911	1
MYO16	Amp_13q31.3	0.911	1
OR4S2	Del_16q23.1	0.911	1
POTEG	Del_6q21	0.911	1
PTPN22	TPTE	0.911	1
SELP	Del_11q23.3	0.911	1
SYK	TTN	0.911	1
XIRP2	ZFX	0.911	1
7p-Amp	8p-Amp	0.911	1
Amp_12q15	Del_6q26	0.911	1
Del_15q13.3	Del_Xp21.1	0.911	1
ACSBG1	MLL	0.912	1
ARID2	HSD11B1	0.912	1
BTK	SLC27A5	0.912	1
C10orf54	CDKN2A	0.912	1
C7orf58	HSD11B1	0.912	1
C7orf58	STK19	0.912	1
CCNA1	RELN	0.912	1
CCNA1	Amp_6p24.3	0.912	1
CDKN2A	OXA1L	0.912	1
CPA3	MAP2K1	0.912	1
CTNNB1	CYP3A4	0.912	1
CTNNB1	PPP6C	0.912	1
CTNNB1	Amp_6q12	0.912	1
CYP3A4	KYNU	0.912	1
CYP3A5	17p-Del	0.912	1
DDX3X	MAP2K1	0.912	1
EZH2	RELN	0.912	1
GLI1	Amp_6p24.3	0.912	1
IGF1R	Del_5q31.3	0.912	1
KRTAP5-10	Amp_4q12	0.912	1
KYNU	LGR6	0.912	1
KYNU	PPP6C	0.912	1
KYNU	Del_10q21.1	0.912	1
MSTN	NUP214	0.912	1
MSTN	Amp_4q12	0.912	1
NBPF1	5q-Del	0.912	1
RAC1	Amp_15q26.2	0.912	1
SLC27A5	ZFX	0.912	1
SLC27A5	Amp_4q12	0.912	1
SLC27A5	Amp_12q15	0.912	1
SYK	17p-Del	0.912	1
ZFX	ZNF780B	0.912	1
Amp_6q12	Amp_15q26.2	0.912	1
ALPK2	C10orf28	0.913	1
ALPK2	EMG1	0.913	1
C10orf28	Amp_20q13.33	0.913	1
C10orf28	Amp_22q13.2	0.913	1
CBL	COL3A1	0.913	1
CBL	KEL	0.913	1
CBL	11q-Del	0.913	1
COL3A1	RB1	0.913	1
DCLK3	13q-Amp	0.913	1
FLT1	OR6C74	0.913	1
GUCY2F	NBPF1	0.913	1
KEL	RB1	0.913	1
NGF	10p-Del	0.913	1
OR6C74	Del_1p36.31	0.913	1
RB1	Del_1p36.31	0.913	1
RQCD1	Del_4q34.3	0.913	1
13q-Amp	Del_16q24.3	0.913	1
6q-Del	Amp_17q25.3	0.913	1
ALPK2	MLL	0.914	1
ATP5F1	NAP1L2	0.914	1
ATP5F1	22q-Amp	0.914	1
CAMTA1	KRAS	0.914	1
CCK	22q-Amp	0.914	1
CDKN2A	7q-Amp	0.914	1
CNTN5	PTPN11	0.914	1
COL3A1	PPP6C	0.914	1
COL3A1	RAC1	0.914	1
CPA3	11q-Del	0.914	1
DMC1	FRMPD4	0.914	1
DMC1	MYO3B	0.914	1
DSG3	Amp_6p24.3	0.914	1
EPHA6	KCND2	0.914	1
FAM58A	PTEN	0.914	1
FRMPD4	GML	0.914	1
GML	MYO3B	0.914	1
GNAQ	NAP1L2	0.914	1
GNAQ	PTEN	0.914	1
GNAQ	22q-Amp	0.914	1
KRAS	NAP1L2	0.914	1
KRAS	PTEN	0.914	1
KRTAP5-10	Del_1p22.1	0.914	1
KRTAP5-10	Del_4p16.3	0.914	1
MAN1A1	7p-Amp	0.914	1
MPP7	Amp_15q26.2	0.914	1
NUDT11	Del_11q23.3	0.914	1
S100A8	Del_11q23.3	0.914	1
ZNF780B	Del_1p22.1	0.914	1
ZNF780B	Del_4p16.3	0.914	1
13q-Amp	Del_8p23.3	0.914	1
7p-Amp	Amp_4q12	0.914	1
Amp_1p12	Del_14q23.3	0.914	1
Amp_3p13	Del_19p13.3	0.914	1
Amp_15q26.2	Del_1p22.1	0.914	1
Del_6q26	Del_15q13.3	0.914	1
FRMPD4	THSD7B	0.915	1
KEL	PPP6C	0.915	1
KEL	RAC1	0.915	1
KEL	Amp_6q12	0.915	1
KRTAP5-10	6q-Del	0.915	1
MSTN	6q-Del	0.915	1
NF1	Del_16q23.1	0.915	1
OR4S2	Amp_3p13	0.915	1
PPP6C	Del_4q34.3	0.915	1
PTEN	9p-Del	0.915	1
1q-Amp	11p-Del	0.915	1
8q-Amp	Del_12q23.3	0.915	1
6p-Del	Amp_12q15	0.915	1
Amp_4q12	Amp_11q13.3	0.915	1
Amp_11q13.3	Amp_12q15	0.915	1
Del_1p36.31	Del_5p15.31	0.915	1
Del_4q34.3	Del_5p15.31	0.915	1
Del_8p23.3	Del_Xp21.1	0.915	1
Del_15q21.1	Del_Xp21.1	0.915	1
ALPK2	DDX3X	0.916	1
BRAF	HSD11B1	0.916	1
C10orf28	EPHA4	0.916	1
C15orf23	RELN	0.916	1
CNTN5	Del_16q23.1	0.916	1
CYP3A4	Del_6q21	0.916	1
EMG1	EPHA4	0.916	1
GML	Amp_22q13.2	0.916	1
NAP1L2	Del_11q23.3	0.916	1
PARM1	6q-Del	0.916	1
20q-Amp	Amp_12q14.1	0.916	1
16q-Del	Amp_4q12	0.916	1
Amp_1p12	Del_19p13.3	0.916	1
Amp_5p15.33	Del_16p13.3	0.916	1
Del_3q13.31	Del_15q13.3	0.916	1
Del_15q13.3	Del_19p13.3	0.916	1
C10orf54	MLL	0.917	1
CCK	THSD7B	0.917	1
CDK4	17p-Del	0.917	1
CDK4	Amp_5p15.33	0.917	1
EPHA6	11q-Del	0.917	1
HRAS	Del_9p23	0.917	1
KIT	Amp_1q44	0.917	1
NUDT11	Amp_5p15.33	0.917	1
OXA1L	17p-Del	0.917	1
Amp_1q44	Del_9p21.3	0.917	1
Del_11q23.3	Del_15q21.1	0.917	1
ANO4	C10orf28	0.918	1
APC	CCNA1	0.918	1
APC	GLI1	0.918	1
C7orf58	7p-Amp	0.918	1
CCNA1	PDGFRA	0.918	1
CDC42BPA	EZH2	0.918	1
CDK4	Del_16p13.3	0.918	1
COL3A1	CTNNB1	0.918	1
CTNNB1	RQCD1	0.918	1
DSG3	6p-Amp	0.918	1
DSG3	9q-Del	0.918	1
EPHA7	Del_16q12.1	0.918	1
EZH2	PTPN22	0.918	1
FRMPD4	Amp_17q25.3	0.918	1
GLI1	RIPK4	0.918	1
GLI1	TRERF1	0.918	1
GLI1	8p-Amp	0.918	1
KIT	KRT73	0.918	1
KIT	TRERF1	0.918	1
KIT	8p-Amp	0.918	1
KIT	Del_5p15.31	0.918	1
KRT73	PDGFRA	0.918	1
KRT73	Del_5p15.31	0.918	1
KYNU	NGF	0.918	1
KYNU	OR6C74	0.918	1
MAP2K1	NGF	0.918	1
NGF	7q-Amp	0.918	1
NGF	Amp_15q26.2	0.918	1
OR6C74	7q-Amp	0.918	1
SLC9A11	TP53	0.918	1
TP53	ZFX	0.918	1
13q-Amp	Del_9p21.3	0.918	1
Del_13q34	Del_16p13.3	0.918	1
APCS	DMC1	0.919	1
ATP5F1	Del_Xp21.1	0.919	1
C10orf54	HRAS	0.919	1
C7orf58	PTEN	0.919	1
C7orf58	10p-Del	0.919	1
C7orf58	Del_Xp21.1	0.919	1
CAMTA1	CYP3A4	0.919	1
CAMTA1	DDX3X	0.919	1
CCK	Del_Xp21.1	0.919	1
CDK4	HRAS	0.919	1
CYP3A5	GML	0.919	1
DDX3X	PTEN	0.919	1
DDX3X	22q-Amp	0.919	1
DMC1	IGF1R	0.919	1
FAM58A	Del_Xp21.1	0.919	1
GML	SYK	0.919	1
GNAQ	Del_Xp21.1	0.919	1
HRAS	NUDT11	0.919	1
HRAS	OXA1L	0.919	1
HRAS	PTPN11	0.919	1
HRAS	S100A8	0.919	1
IGF1R	Del_15q13.3	0.919	1
POTEG	Del_9p21.3	0.919	1
RAC1	22q-Amp	0.919	1
RQCD1	5q-Del	0.919	1
20q-Amp	11q-Del	0.919	1
22q-Amp	Amp_6q12	0.919	1
14q-Del	Del_Xp21.1	0.919	1
6q-Del	Amp_13q31.3	0.919	1
Amp_7q34	Del_10p15.3	0.919	1
Amp_8q24.21	Amp_15q26.2	0.919	1
Del_2q37.3	Del_9p21.3	0.919	1
ATP5F1	USH2A	0.92	1
CCK	Del_3q13.31	0.92	1
CNTN5	Del_13q34	0.92	1
EMG1	9q-Del	0.92	1
GNAQ	USH2A	0.92	1
GNAQ	Del_19p13.3	0.92	1
HSD11B1	Amp_13q31.3	0.92	1
KRAS	USH2A	0.92	1
NRAS	RPTN	0.92	1
NRAS	Del_5q31.3	0.92	1
Amp_1q21.3	Del_13q34	0.92	1
Amp_1q44	Del_10q26.3	0.92	1
CCNA1	Del_16q12.1	0.921	1
FRMPD4	Amp_6p24.3	0.921	1
GML	Del_13q34	0.921	1
KCND2	ZNF780B	0.921	1
MPP7	Del_6q26	0.921	1
MPP7	Del_16q23.1	0.921	1
NBPF1	PTPN22	0.921	1
PDGFRA	Del_2q37.3	0.921	1
POTEG	PTPN22	0.921	1
RELN	16q-Del	0.921	1
RELN	Del_16q12.1	0.921	1
TPTE	Del_6q26	0.921	1
22q-Amp	Del_10q23.31	0.921	1
8q-Amp	Del_14q23.3	0.921	1
Amp_5p15.33	Del_10q26.3	0.921	1
APC	C15orf23	0.922	1
ARID2	C15orf23	0.922	1
C15orf23	C7orf58	0.922	1
C15orf23	CTNNB1	0.922	1
C15orf23	PDGFRA	0.922	1
C15orf23	Del_5p15.31	0.922	1
C15orf23	Del_5q12.1	0.922	1
C7orf58	GUCY2F	0.922	1
C7orf58	13q-Amp	0.922	1
CTNNB1	GUCY2F	0.922	1
CTNNB1	13q-Amp	0.922	1
EZH2	1q-Amp	0.922	1
FLT1	NRAS	0.922	1
GUCY2F	TRERF1	0.922	1
HRAS	8q-Amp	0.922	1
HSD11B1	MSTN	0.922	1
KIT	1q-Amp	0.922	1
KRTAP5-10	STK19	0.922	1
KRTAP5-10	XIRP2	0.922	1
MAP2K1	PARM1	0.922	1
MAP2K1	13q-Amp	0.922	1
MPP7	Amp_6p24.3	0.922	1
MSTN	STK19	0.922	1
OXA1L	Amp_1p12	0.922	1
PDGFRA	13q-Amp	0.922	1
PTEN	Del_12q23.3	0.922	1
PTPN11	Amp_1p12	0.922	1
PTPN22	SLC9A11	0.922	1
PTPN22	6p-Amp	0.922	1
PTPN22	Amp_6p24.3	0.922	1
RQCD1	Del_5q31.3	0.922	1
SLC27A5	STK19	0.922	1
1q-Amp	18p-Del	0.922	1
16q-Del	18p-Del	0.922	1
Amp_6p24.3	Amp_17q25.3	0.922	1
ACSBG1	THSD7B	0.923	1
ARID2	C7orf58	0.923	1
C10orf28	CPA3	0.923	1
C10orf28	CYP3A4	0.923	1
C10orf28	LGR6	0.923	1
C10orf28	PPP6C	0.923	1
C15orf23	NRAS	0.923	1
CCK	EPHA6	0.923	1
CYP3A4	EMG1	0.923	1
EPHA4	Del_6q26	0.923	1
EPHA6	KRAS	0.923	1
IDH1	SLC38A4	0.923	1
MAN1A1	MYO16	0.923	1
MYO16	NUP214	0.923	1
MYO16	ZFX	0.923	1
MYO16	Amp_4q12	0.923	1
MYO3B	USP9X	0.923	1
NAP1L2	6q-Del	0.923	1
PTEN	6q-Del	0.923	1
SELP	ZFX	0.923	1
SYK	THSD7B	0.923	1
XIRP2	17p-Del	0.923	1
7q-Amp	Del_1p22.1	0.923	1
8q-Amp	14q-Del	0.923	1
Amp_3p13	Del_15q21.1	0.923	1
Amp_12q14.1	Del_10q23.31	0.923	1
Del_1p36.31	Del_8p23.3	0.923	1
Del_4q34.3	Del_Xp21.1	0.923	1
C10orf54	TTN	0.924	1
CBL	Amp_6p24.3	0.924	1
CNTN5	HSD11B1	0.924	1
CTNNB1	7q-Amp	0.924	1
EMG1	6q-Del	0.924	1
EPHA7	NRAS	0.924	1
MLL	17p-Del	0.924	1
NGF	Amp_6p24.3	0.924	1
NRAS	SELP	0.924	1
RQCD1	16q-Del	0.924	1
RQCD1	Amp_6p24.3	0.924	1
7q-Amp	Amp_15q26.2	0.924	1
10p-Del	Amp_7q34	0.924	1
Amp_4q12	Amp_22q13.2	0.924	1
Amp_12q15	Amp_22q13.2	0.924	1
ACSBG1	NF1	0.925	1
ANO4	MLL	0.925	1
APCS	Del_8p23.3	0.925	1
BTK	Amp_6q12	0.925	1
CBL	Del_6q21	0.925	1
CNTN5	Del_16q24.3	0.925	1
CPA3	NUP214	0.925	1
CYP3A4	MAN1A1	0.925	1
DDX3X	MAN1A1	0.925	1
IDH1	LGR6	0.925	1
IDH1	RAC1	0.925	1
IGF1R	NF1	0.925	1
MAN1A1	PPP6C	0.925	1
MAN1A1	RAC1	0.925	1
MPP7	Del_16q24.3	0.925	1
NUP214	PPP6C	0.925	1
PPP6C	Amp_4q12	0.925	1
PPP6C	Amp_12q15	0.925	1
PTPN22	RELN	0.925	1
RAC1	Amp_4q12	0.925	1
SYK	Del_8p23.3	0.925	1
THSD7B	TP53	0.925	1
TP63	10q-Del	0.925	1
TP63	Del_4p16.3	0.925	1
TP63	Del_9p23	0.925	1
ZFX	Amp_6q12	0.925	1
6p-Amp	Del_10q23.31	0.925	1
7q-Amp	Del_1p36.31	0.925	1
8q-Amp	Amp_17q25.3	0.925	1
8q-Amp	Del_4p16.3	0.925	1
18p-Del	Del_16q12.1	0.925	1
Amp_4q12	Amp_6q12	0.925	1
ALPK2	16q-Del	0.926	1
C10orf54	OR4S2	0.926	1
CCNA1	PTEN	0.926	1
CDK4	OR4S2	0.926	1
CDK4	7p-Amp	0.926	1
CDKN2A	USP9X	0.926	1
CPA3	9p-Del	0.926	1
GLI1	NAP1L2	0.926	1
MSTN	TP63	0.926	1
NF1	Del_16q12.1	0.926	1
NUDT11	TPTE	0.926	1
OR4S2	OXA1L	0.926	1
OR4S2	PTPN11	0.926	1
OR4S2	S100A8	0.926	1
OXA1L	USP9X	0.926	1
PTEN	RIPK4	0.926	1
PTPN11	USP9X	0.926	1
TPTE	Del_16p13.3	0.926	1
1q-Amp	Del_10q21.1	0.926	1
8q-Amp	Del_6q21	0.926	1
Amp_20q13.33	Del_15q13.3	0.926	1
BTK	CBL	0.927	1
BTK	RQCD1	0.927	1
C15orf23	DSG3	0.927	1
C7orf58	Del_16q23.1	0.927	1
CDC42BPA	CDKN2A	0.927	1
CDK4	NF1	0.927	1
CDKN2A	GLI1	0.927	1
CDKN2A	RIPK4	0.927	1
CTNNA3	KRTAP5-10	0.927	1
CTNNA3	SLC27A5	0.927	1
CYP3A5	USH2A	0.927	1
IDH1	NGF	0.927	1
IDH1	RB1	0.927	1
IDH1	RQCD1	0.927	1
IGF1R	USH2A	0.927	1
MAN1A1	OR6C74	0.927	1
MAN1A1	RB1	0.927	1
MAN1A1	RQCD1	0.927	1
NGF	ZFX	0.927	1
NGF	Amp_12q15	0.927	1
NUP214	OR6C74	0.927	1
NUP214	RQCD1	0.927	1
OR6C74	ZFX	0.927	1
OR6C74	Amp_4q12	0.927	1
OR6C74	Amp_12q15	0.927	1
RIPK4	11q-Del	0.927	1
RQCD1	Amp_12q15	0.927	1
STK19	Del_16q24.3	0.927	1
SYK	Amp_7p22.1	0.927	1
TP63	Amp_7p22.1	0.927	1
6q-Del	Del_13q34	0.927	1
Amp_12q14.1	Del_2q37.3	0.927	1
CDKN2A	SELP	0.928	1
CDKN2A	USP17L2	0.928	1
DMC1	POTEG	0.928	1
DSG3	HRAS	0.928	1
GML	POTEG	0.928	1
NAP1L2	Del_1p36.31	0.928	1
NGF	Amp_1q44	0.928	1
PTEN	Del_4q34.3	0.928	1
6p-Amp	Amp_22q13.2	0.928	1
10p-Del	Amp_13q31.3	0.928	1
Amp_20q13.33	Del_3q13.31	0.928	1
Amp_20q13.33	Del_19p13.3	0.928	1
C10orf28	HRAS	0.929	1
CAMTA1	TPTE	0.929	1
EMG1	HRAS	0.929	1
EPHA7	11p-Del	0.929	1
KYNU	Amp_7p22.1	0.929	1
LGR6	Del_3q13.31	0.929	1
MPP7	Del_13q34	0.929	1
NF1	11p-Del	0.929	1
PTEN	7p-Amp	0.929	1
RIPK4	10q-Del	0.929	1
SLC9A11	Del_1p36.31	0.929	1
TP63	Amp_7q34	0.929	1
TPTE	11p-Del	0.929	1
1q-Amp	7p-Amp	0.929	1
20p-Amp	Del_11q23.3	0.929	1
6p-Amp	7p-Amp	0.929	1
8q-Amp	Amp_7q34	0.929	1
Amp_7q34	Amp_12q14.1	0.929	1
Amp_7q34	Del_16p13.3	0.929	1
BTK	MPP7	0.93	1
C10orf28	C15orf23	0.93	1
C10orf28	13q-Amp	0.93	1
C10orf54	THSD7B	0.93	1
C15orf23	FLT1	0.93	1
CBL	MYO16	0.93	1
CDC42BPA	GML	0.93	1
CTNNB1	Amp_3p13	0.93	1
DMC1	GLI1	0.93	1
DMC1	KRT73	0.93	1
DMC1	RIPK4	0.93	1
EMG1	PARM1	0.93	1
EMG1	13q-Amp	0.93	1
EMG1	9p-Del	0.93	1
EZH2	GML	0.93	1
GLI1	GML	0.93	1
GML	RIPK4	0.93	1
MAN1A1	Amp_17q25.3	0.93	1
MYO16	RB1	0.93	1
MYO16	RQCD1	0.93	1
OR6C74	SELP	0.93	1
OR6C74	SLC38A4	0.93	1
POTEG	TP63	0.93	1
POTEG	8q-Amp	0.93	1
RB1	SLC38A4	0.93	1
TP63	Del_2q37.3	0.93	1
TRERF1	Del_16q23.1	0.93	1
TTN	13q-Amp	0.93	1
13q-Amp	Del_1p36.31	0.93	1
Amp_4q12	Amp_17q25.3	0.93	1
Amp_4q12	Del_1p22.1	0.93	1
Amp_5p15.33	Del_11q23.3	0.93	1
Amp_6p24.3	Amp_22q13.2	0.93	1
Del_2q37.3	Del_16q24.3	0.93	1
ACSBG1	ARID2	0.931	1
ACSBG1	C7orf58	0.931	1
ALPK2	HRAS	0.931	1
BRAF	CCNA1	0.931	1
BRAF	EZH2	0.931	1
C7orf58	CYP3A5	0.931	1
CPA3	Del_10q23.31	0.931	1
CYP3A5	Del_5q12.1	0.931	1
DDX3X	16q-Del	0.931	1
EMG1	Del_16q23.1	0.931	1
FGFR2	MYO16	0.931	1
MLL	7p-Amp	0.931	1
MYO16	Del_2q37.3	0.931	1
PPP6C	16q-Del	0.931	1
PTEN	Del_6q26	0.931	1
TPTE	17p-Del	0.931	1
11q-Del	5q-Del	0.931	1
ACSBG1	MSTN	0.932	1
ACSBG1	SLC27A5	0.932	1
APCS	MSTN	0.932	1
APCS	ZNF780B	0.932	1
C7orf58	S100A8	0.932	1
CCK	NRAS	0.932	1
CCK	Amp_13q31.3	0.932	1
CDC42BPA	MLL	0.932	1
CDK4	14q-Del	0.932	1
CYP3A5	KRTAP5-10	0.932	1
CYP3A5	MSTN	0.932	1
CYP3A5	ZNF780B	0.932	1
EPHA6	USP9X	0.932	1
EZH2	MLL	0.932	1
EZH2	17p-Del	0.932	1
GLI1	MLL	0.932	1
GLI1	20q-Amp	0.932	1
GLI1	7q-Amp	0.932	1
GML	SLC9A11	0.932	1
KRT73	17p-Del	0.932	1
NAP1L2	Del_2q37.3	0.932	1
NBPF1	22q-Amp	0.932	1
OR4S2	17p-Del	0.932	1
PDGFRA	TRERF1	0.932	1
PTEN	20p-Amp	0.932	1
PTEN	18p-Del	0.932	1
RIPK4	7q-Amp	0.932	1
RIPK4	17p-Del	0.932	1
SYK	ZNF780B	0.932	1
TP63	Del_16p13.3	0.932	1
TRERF1	8p-Amp	0.932	1
USP9X	Amp_5p15.33	0.932	1
20p-Amp	22q-Amp	0.932	1
8q-Amp	Del_16p13.3	0.932	1
14q-Del	Del_3q13.31	0.932	1
Amp_3p13	Del_5q12.1	0.932	1
Amp_12q14.1	Del_10q26.3	0.932	1
Del_5q12.1	Del_19p13.3	0.932	1
ALPK2	GUCY2F	0.933	1
ARID2	FLT1	0.933	1
CCNA1	XIRP2	0.933	1
CCNA1	Amp_7q34	0.933	1
CDKN2A	20p-Amp	0.933	1
CYP3A5	EPHA6	0.933	1
FRMPD4	MSTN	0.933	1
FRMPD4	ZNF780B	0.933	1
GLI1	Amp_7q34	0.933	1
KIT	XIRP2	0.933	1
KIT	Del_19p13.3	0.933	1
MYO3B	SLC27A5	0.933	1
PTPN11	Del_9p21.3	0.933	1
TRERF1	16q-Del	0.933	1
13q-Amp	10p-Del	0.933	1
7p-Amp	Del_1p36.31	0.933	1
Amp_6p24.3	Del_9p21.3	0.933	1
Del_4q34.3	Del_5q12.1	0.933	1
Del_13q34	Del_19p13.3	0.933	1
BTK	C15orf23	0.934	1
BTK	13q-Amp	0.934	1
C15orf23	ZFX	0.934	1
CCK	TP63	0.934	1
CCK	8q-Amp	0.934	1
CDK4	KYNU	0.934	1
CTNNB1	S100A8	0.934	1
FAM58A	TP63	0.934	1
FRMPD4	Del_15q21.1	0.934	1
GUCY2F	ZFX	0.934	1
GUCY2F	Amp_12q15	0.934	1
IDH1	13q-Amp	0.934	1
IDH1	9q-Del	0.934	1
KRAS	TP63	0.934	1
KYNU	OXA1L	0.934	1
KYNU	S100A8	0.934	1
MAP2K1	NUDT11	0.934	1
MAP2K1	PTPN11	0.934	1
MAP2K1	S100A8	0.934	1
NUDT11	Amp_15q26.2	0.934	1
NUP214	PARM1	0.934	1
PARM1	Amp_12q15	0.934	1
SYK	USP17L2	0.934	1
13q-Amp	11q-Del	0.934	1
17p-Del	Del_6q21	0.934	1
9q-Del	Amp_12q15	0.934	1
Amp_1q21.3	Amp_4q12	0.934	1
CDKN2A	NF1	0.935	1
DSG3	SLC27A5	0.935	1
DSG3	ZNF780B	0.935	1
EMG1	Del_16q12.1	0.935	1
KRTAP5-10	TP53	0.935	1
NRAS	6p-Amp	0.935	1
NRAS	Amp_20q13.33	0.935	1
PDGFRA	Amp_12q14.1	0.935	1
POTEG	Del_6q26	0.935	1
RB1	Amp_17q25.3	0.935	1
RQCD1	Amp_17q25.3	0.935	1
RQCD1	Del_4p16.3	0.935	1
SLC27A5	TP53	0.935	1
ZNF780B	11p-Del	0.935	1
20p-Amp	Del_6q26	0.935	1
Amp_3p13	Amp_7q34	0.935	1
Del_5p15.31	Del_16p13.3	0.935	1
BRAF	USH2A	0.936	1
C7orf58	Del_9p23	0.936	1
CDK4	Del_4q34.3	0.936	1
CTNNB1	RPTN	0.936	1
EMG1	Amp_12q14.1	0.936	1
FLT1	PTPN11	0.936	1
HSD11B1	OR6C74	0.936	1
HSD11B1	RQCD1	0.936	1
KEL	OXA1L	0.936	1
KEL	S100A8	0.936	1
NGF	STK19	0.936	1
OR6C74	STK19	0.936	1
RELN	Del_16p13.3	0.936	1
RIPK4	Del_11q23.3	0.936	1
RQCD1	STK19	0.936	1
S100A8	Del_1p36.31	0.936	1
THSD7B	Del_11q23.3	0.936	1
USP17L2	17p-Del	0.936	1
1q-Amp	10q-Del	0.936	1
1q-Amp	11q-Del	0.936	1
7p-Amp	6p-Del	0.936	1
11p-Del	Amp_8q24.21	0.936	1
14q-Del	Del_11q23.3	0.936	1
17p-Del	Amp_13q31.3	0.936	1
9q-Del	Del_3q13.31	0.936	1
9q-Del	Del_19p13.3	0.936	1
Amp_1q21.3	Del_3q13.31	0.936	1
Amp_5p15.33	Amp_13q31.3	0.936	1
Del_5q12.1	Del_14q23.3	0.936	1
Del_5q12.1	Del_16q12.1	0.936	1
ACSBG1	Del_4q34.3	0.937	1
APCS	FLT1	0.937	1
C7orf58	Del_16p13.3	0.937	1
CYP3A4	HSD11B1	0.937	1
CYP3A5	FLT1	0.937	1
CYP3A5	Del_4q34.3	0.937	1
DDX3X	SLC9A11	0.937	1
EPHA4	GNAQ	0.937	1
EPHA4	KRAS	0.937	1
EZH2	Amp_1q21.3	0.937	1
FAM58A	6p-Del	0.937	1
FLT1	IGF1R	0.937	1
GNAQ	6p-Del	0.937	1
GNAQ	Amp_11q13.3	0.937	1
HRAS	Del_6q26	0.937	1
IDH1	THSD7B	0.937	1
KEL	SYK	0.937	1
KRAS	6p-Del	0.937	1
KRAS	Amp_11q13.3	0.937	1
KYNU	MYO3B	0.937	1
MLL	SELP	0.937	1
NF1	1q-Amp	0.937	1
RAC1	SLC9A11	0.937	1
SLC38A4	17p-Del	0.937	1
TP63	Amp_13q31.3	0.937	1
1q-Amp	Del_8p23.3	0.937	1
6p-Amp	10q-Del	0.937	1
14q-Del	Amp_12q14.1	0.937	1
14q-Del	Del_16p13.3	0.937	1
6p-Del	Amp_13q31.3	0.937	1
Amp_1p12	Del_13q34	0.937	1
C10orf28	Del_10q26.3	0.938	1
CYP3A5	9p-Del	0.938	1
DSG3	STK19	0.938	1
EPHA6	RB1	0.938	1
EPHA7	PPP6C	0.938	1
EZH2	Amp_1p12	0.938	1
GLI1	Amp_1p12	0.938	1
GLI1	Del_15q13.3	0.938	1
HSD11B1	TP53	0.938	1
KIT	Amp_1p12	0.938	1
MPP7	16q-Del	0.938	1
MPP7	Del_Xp21.1	0.938	1
NUP214	6q-Del	0.938	1
PDGFRA	Del_16q12.1	0.938	1
POTEG	9q-Del	0.938	1
RAC1	SLC38A4	0.938	1
RIPK4	Del_15q13.3	0.938	1
SELP	SLC38A4	0.938	1
6q-Del	Amp_4q12	0.938	1
6q-Del	Amp_12q15	0.938	1
6q-Del	Del_16p13.3	0.938	1
Amp_12q14.1	Del_10p15.3	0.938	1
Amp_13q31.3	Del_10q23.31	0.938	1
Amp_17q25.3	Del_Xp21.1	0.938	1
Amp_22q13.2	Del_8p23.3	0.938	1
Del_1p22.1	Del_Xp21.1	0.938	1
Del_4p16.3	Del_Xp21.1	0.938	1
Del_4q34.3	Del_16q23.1	0.938	1
ALPK2	KRTAP5-10	0.939	1
ALPK2	SLC27A5	0.939	1
ANO4	C15orf23	0.939	1
ANO4	PARM1	0.939	1
ATP5F1	HRAS	0.939	1
CCK	HRAS	0.939	1
EPHA7	HSD11B1	0.939	1
FAM58A	HRAS	0.939	1
GNAQ	HRAS	0.939	1
HRAS	KRAS	0.939	1
HRAS	SLC9A11	0.939	1
HRAS	6p-Amp	0.939	1
HSD11B1	MYO16	0.939	1
MSTN	Amp_22q13.2	0.939	1
NBPF1	OR4S2	0.939	1
OR4S2	18p-Del	0.939	1
OXA1L	Del_10p15.3	0.939	1
POTEG	USP9X	0.939	1
USP9X	20p-Amp	0.939	1
11q-Del	Amp_6p24.3	0.939	1
Amp_7q34	Del_9p23	0.939	1
Del_5p15.31	Del_10p15.3	0.939	1
ARID2	6q-Del	0.94	1
ARID2	Amp_6p24.3	0.94	1
C7orf58	DSG3	0.94	1
COL3A1	ZFX	0.94	1
CPA3	Del_10q26.3	0.94	1
DCLK3	Del_4p16.3	0.94	1
DMC1	GML	0.94	1
KCND2	OR6C74	0.94	1
KCND2	RQCD1	0.94	1
MPP7	POTEG	0.94	1
NRAS	5q-Del	0.94	1
NRAS	6p-Del	0.94	1
PTEN	Amp_7p22.1	0.94	1
TPTE	Del_12q23.3	0.94	1
20p-Amp	Del_1p22.1	0.94	1
7p-Amp	11q-Del	0.94	1
7p-Amp	Amp_22q13.2	0.94	1
17p-Del	Del_6q26	0.94	1
9q-Del	Amp_1q44	0.94	1
Amp_3p13	Del_4q34.3	0.94	1
Del_1p36.31	Del_19p13.3	0.94	1
Del_1p22.1	Del_2q37.3	0.94	1
APC	SELP	0.941	1
ATP5F1	DSG3	0.941	1
ATP5F1	11p-Del	0.941	1
BTK	SLC9A11	0.941	1
BTK	6p-Amp	0.941	1
CCK	TP53	0.941	1
CCNA1	MSTN	0.941	1
CDC42BPA	ZNF780B	0.941	1
CDKN2A	KYNU	0.941	1
DCLK3	17p-Del	0.941	1
EZH2	ZNF780B	0.941	1
FAM58A	TP53	0.941	1
FGFR2	20q-Amp	0.941	1
GLI1	SLC27A5	0.941	1
GML	22q-Amp	0.941	1
IDH1	6p-Amp	0.941	1
IDH1	Del_9p23	0.941	1
KIT	SLC27A5	0.941	1
KIT	ZNF780B	0.941	1
KRT73	KRTAP5-10	0.941	1
MPP7	TP53	0.941	1
MYO16	PDGFRA	0.941	1
MYO16	PTPN22	0.941	1
MYO16	TRERF1	0.941	1
NAP1L2	PDGFRA	0.941	1
POTEG	17p-Del	0.941	1
PTEN	8p-Amp	0.941	1
PTEN	Amp_6p24.3	0.941	1
RIPK4	ZNF780B	0.941	1
TP63	1q-Amp	0.941	1
TP63	9p-Del	0.941	1
TPTE	Del_16q23.1	0.941	1
USH2A	ZFX	0.941	1
1q-Amp	Del_16q24.3	0.941	1
22q-Amp	8p-Amp	0.941	1
7q-Amp	Amp_8q24.21	0.941	1
6q-Del	Del_3q13.31	0.941	1
Amp_12q15	Del_9p23	0.941	1
Del_10q21.1	Del_13q34	0.941	1
APCS	EPHA4	0.942	1
BTK	PTPN11	0.942	1
BTK	S100A8	0.942	1
C10orf54	NUP214	0.942	1
C10orf54	ZFX	0.942	1
CDK4	NUP214	0.942	1
CDK4	Amp_4q12	0.942	1
CTNNB1	OR4S2	0.942	1
CYP3A5	5q-Del	0.942	1
CYP3A5	Amp_11q13.3	0.942	1
IGF1R	Amp_11q13.3	0.942	1
KCND2	Del_Xp21.1	0.942	1
MAN1A1	NUDT11	0.942	1
MSTN	THSD7B	0.942	1
NUDT11	NUP214	0.942	1
NUP214	OXA1L	0.942	1
NUP214	S100A8	0.942	1
OXA1L	Amp_12q15	0.942	1
POTEG	Del_5q31.3	0.942	1
PTPN11	ZFX	0.942	1
SYK	5q-Del	0.942	1
SYK	6p-Del	0.942	1
20p-Amp	Del_3q13.31	0.942	1
20p-Amp	Del_19p13.3	0.942	1
18p-Del	Del_3q13.31	0.942	1
Amp_6p24.3	Del_10q26.3	0.942	1
Del_2q37.3	Del_3q13.31	0.942	1
Del_6q21	Del_13q34	0.942	1
ATP5F1	RAC1	0.943	1
CCK	DDX3X	0.943	1
CCK	LGR6	0.943	1
CCK	PPP6C	0.943	1
CDK4	11q-Del	0.943	1
COL3A1	PTPN11	0.943	1
CPA3	Del_10q21.1	0.943	1
CTNNA3	IDH1	0.943	1
CTNNA3	MAN1A1	0.943	1
CYP3A4	KRAS	0.943	1
DDX3X	KRAS	0.943	1
EMG1	MLL	0.943	1
EMG1	17p-Del	0.943	1
EZH2	NF1	0.943	1
FAM58A	LGR6	0.943	1
FAM58A	RAC1	0.943	1
FAM58A	Amp_6q12	0.943	1
GLI1	NF1	0.943	1
GNAQ	LGR6	0.943	1
GNAQ	PPP6C	0.943	1
GNAQ	Amp_6q12	0.943	1
IDH1	9p-Del	0.943	1
IDH1	Del_16p13.3	0.943	1
KRAS	RAC1	0.943	1
KRAS	Amp_6q12	0.943	1
PARM1	16q-Del	0.943	1
PPP6C	USH2A	0.943	1
PTEN	Del_16p13.3	0.943	1
S100A8	11q-Del	0.943	1
TRERF1	Del_16q24.3	0.943	1
11p-Del	Amp_12q14.1	0.943	1
11q-Del	Amp_7q34	0.943	1
9q-Del	Del_Xp21.1	0.943	1
Amp_4q12	Amp_12q14.1	0.943	1
Amp_4q12	Del_16p13.3	0.943	1
Amp_12q14.1	Del_1p36.31	0.943	1
Amp_12q14.1	Del_4q34.3	0.943	1
Amp_12q15	Del_16p13.3	0.943	1
Del_1p36.31	Del_16p13.3	0.943	1
ACSBG1	NGF	0.944	1
ACSBG1	OR6C74	0.944	1
ALPK2	CCK	0.944	1
ALPK2	GNAQ	0.944	1
APCS	OR6C74	0.944	1
CBL	CYP3A5	0.944	1
CCK	Amp_20q13.33	0.944	1
COL3A1	TRERF1	0.944	1
CTNNB1	Del_12q23.3	0.944	1
CYP3A5	NGF	0.944	1
CYP3A5	OR6C74	0.944	1
DCLK3	MSTN	0.944	1
HRAS	RPTN	0.944	1
HRAS	Del_16q12.1	0.944	1
IGF1R	NGF	0.944	1
IGF1R	RQCD1	0.944	1
KRTAP5-10	POTEG	0.944	1
MAN1A1	7q-Amp	0.944	1
MAP2K1	Del_13q34	0.944	1
NBPF1	ZNF780B	0.944	1
NF1	11q-Del	0.944	1
NGF	Amp_1q21.3	0.944	1
PDGFRA	11q-Del	0.944	1
POTEG	11p-Del	0.944	1
PTPN22	XIRP2	0.944	1
TRERF1	XIRP2	0.944	1
USH2A	Del_4q34.3	0.944	1
Amp_1p12	Del_15q13.3	0.944	1
C10orf54	NRAS	0.945	1
CDKN2A	PTPN22	0.945	1
CDKN2A	14q-Del	0.945	1
CDKN2A	Del_5q12.1	0.945	1
CNTN5	ZNF780B	0.945	1
CPA3	Amp_17q25.3	0.945	1
CTNNA3	NGF	0.945	1
HSD11B1	PARM1	0.945	1
HSD11B1	13q-Amp	0.945	1
MPP7	RAC1	0.945	1
MYO16	Amp_1p12	0.945	1
NUDT11	16q-Del	0.945	1
OR6C74	Amp_3p13	0.945	1
STK19	Del_4p16.3	0.945	1
USH2A	ZNF780B	0.945	1
13q-Amp	Del_6q21	0.945	1
1q-Amp	7q-Amp	0.945	1
7q-Amp	Amp_22q13.2	0.945	1
6q-Del	Del_Xp21.1	0.945	1
Amp_6q12	Amp_17q25.3	0.945	1
ACSBG1	TP63	0.946	1
APC	OR4S2	0.946	1
APC	USP9X	0.946	1
APCS	Del_16q24.3	0.946	1
C10orf28	Amp_1p12	0.946	1
EMG1	Amp_1p12	0.946	1
EPHA4	6p-Del	0.946	1
GML	Amp_1q44	0.946	1
HRAS	Del_6q21	0.946	1
IGF1R	8q-Amp	0.946	1
KEL	Del_16q12.1	0.946	1
KIT	Del_6q26	0.946	1
MPP7	MYO16	0.946	1
OR4S2	PDGFRA	0.946	1
OR4S2	PTPN22	0.946	1
OR6C74	TTN	0.946	1
OXA1L	7q-Amp	0.946	1
PDGFRA	USP9X	0.946	1
PPP6C	TTN	0.946	1
RAC1	USP17L2	0.946	1
RQCD1	TTN	0.946	1
SLC38A4	Amp_17q25.3	0.946	1
SYK	TP63	0.946	1
TRERF1	USP9X	0.946	1
USP9X	8p-Amp	0.946	1
20q-Amp	Del_1p22.1	0.946	1
11q-Del	Amp_13q31.3	0.946	1
17p-Del	Amp_17q25.3	0.946	1
5q-Del	Del_16q24.3	0.946	1
Amp_3p13	Del_Xp21.1	0.946	1
Amp_4q12	Del_16q23.1	0.946	1
Amp_5p15.33	Amp_17q25.3	0.946	1
Amp_7p22.1	Del_15q21.1	0.946	1
Amp_8q24.21	Del_19p13.3	0.946	1
Amp_13q31.3	Del_10q26.3	0.946	1
APCS	CNTN5	0.947	1
CCK	Amp_1q44	0.947	1
CDKN2A	HRAS	0.947	1
CTNNB1	Del_6q26	0.947	1
EZH2	Amp_13q31.3	0.947	1
GML	Del_19p13.3	0.947	1
KIT	USP17L2	0.947	1
KRAS	Amp_1q44	0.947	1
MLL	Amp_15q26.2	0.947	1
OR4S2	TP63	0.947	1
OR4S2	Del_16q24.3	0.947	1
USP9X	8q-Amp	0.947	1
20q-Amp	Amp_15q26.2	0.947	1
10q-Del	Amp_15q26.2	0.947	1
17p-Del	Amp_1q44	0.947	1
5q-Del	Del_16q23.1	0.947	1
Amp_5p15.33	Amp_15q26.2	0.947	1
ACSBG1	CYP3A4	0.948	1
ACSBG1	LGR6	0.948	1
ACSBG1	PPP6C	0.948	1
ALPK2	Amp_17q25.3	0.948	1
APCS	LGR6	0.948	1
APCS	PPP6C	0.948	1
APCS	16q-Del	0.948	1
ARID2	CDC42BPA	0.948	1
ARID2	KRT73	0.948	1
ARID2	RIPK4	0.948	1
ARID2	1q-Amp	0.948	1
ATP5F1	C15orf23	0.948	1
ATP5F1	GUCY2F	0.948	1
C15orf23	CCK	0.948	1
C15orf23	GNAQ	0.948	1
CCK	13q-Amp	0.948	1
CDC42BPA	Del_5q12.1	0.948	1
CPA3	IGF1R	0.948	1
CPA3	SYK	0.948	1
CYP3A4	IGF1R	0.948	1
CYP3A4	Del_16q12.1	0.948	1
CYP3A5	RAC1	0.948	1
CYP3A5	16q-Del	0.948	1
DDX3X	IGF1R	0.948	1
DDX3X	SYK	0.948	1
EPHA4	17p-Del	0.948	1
FAM58A	PARM1	0.948	1
FRMPD4	6p-Amp	0.948	1
IGF1R	LGR6	0.948	1
IGF1R	PPP6C	0.948	1
IGF1R	Amp_6q12	0.948	1
MYO16	1q-Amp	0.948	1
NRAS	TRERF1	0.948	1
TTN	ZFX	0.948	1
10q-Del	Del_13q34	0.948	1
17p-Del	6p-Del	0.948	1
6p-Del	Amp_5p15.33	0.948	1
Amp_3p13	Amp_11q13.3	0.948	1
Amp_4q12	Del_10p15.3	0.948	1
Amp_12q14.1	Amp_20q13.33	0.948	1
Amp_12q15	Del_10p15.3	0.948	1
Amp_22q13.2	Del_14q23.3	0.948	1
Del_2q37.3	Del_15q13.3	0.948	1
APC	Del_4p16.3	0.949	1
C10orf28	KYNU	0.949	1
C10orf28	MAP2K1	0.949	1
C15orf23	MYO16	0.949	1
CAMTA1	NAP1L2	0.949	1
CDK4	EPHA7	0.949	1
CDK4	STK19	0.949	1
CDK4	Del_5q31.3	0.949	1
CTNNA3	TP63	0.949	1
CYP3A4	EPHA6	0.949	1
DSG3	USP17L2	0.949	1
DSG3	Amp_13q31.3	0.949	1
EPHA4	Del_6q21	0.949	1
EPHA6	KYNU	0.949	1
HRAS	9p-Del	0.949	1
HSD11B1	PTPN11	0.949	1
HSD11B1	S100A8	0.949	1
IDH1	MYO3B	0.949	1
MYO16	OXA1L	0.949	1
MYO16	13q-Amp	0.949	1
MYO3B	NUP214	0.949	1
NGF	TP63	0.949	1
OR6C74	TP63	0.949	1
OXA1L	STK19	0.949	1
PARM1	SELP	0.949	1
PTPN11	STK19	0.949	1
RB1	TP63	0.949	1
RB1	8q-Amp	0.949	1
RB1	Del_16q24.3	0.949	1
S100A8	SLC38A4	0.949	1
S100A8	STK19	0.949	1
TPTE	Del_10q21.1	0.949	1
6p-Amp	10p-Del	0.949	1
6p-Amp	Del_10q21.1	0.949	1
Amp_13q31.3	Del_8p23.3	0.949	1
Amp_13q31.3	Del_15q21.1	0.949	1
Del_1p22.1	Del_5p15.31	0.949	1
APC	SLC27A5	0.95	1
APC	ZNF780B	0.95	1
ARID2	USP9X	0.95	1
C15orf23	SLC9A11	0.95	1
C7orf58	OR4S2	0.95	1
CTNNB1	NBPF1	0.95	1
DMC1	KRTAP5-10	0.95	1
DMC1	MSTN	0.95	1
DMC1	ZNF780B	0.95	1
DMC1	20q-Amp	0.95	1
EMG1	NF1	0.95	1
FGFR2	Amp_20q13.33	0.95	1
GML	KRTAP5-10	0.95	1
GML	11q-Del	0.95	1
KEL	TP53	0.95	1
KRTAP5-10	PDGFRA	0.95	1
KYNU	NBPF1	0.95	1
MSTN	PTPN22	0.95	1
MYO3B	OR6C74	0.95	1
MYO3B	RB1	0.95	1
MYO3B	Del_1p36.31	0.95	1
NBPF1	Amp_22q13.2	0.95	1
NRAS	9q-Del	0.95	1
OXA1L	10p-Del	0.95	1
PDGFRA	SLC27A5	0.95	1
RB1	Amp_8q24.21	0.95	1
RQCD1	Amp_8q24.21	0.95	1
TP53	Del_4q34.3	0.95	1
TP63	7p-Amp	0.95	1
20p-Amp	Amp_15q26.2	0.95	1
11p-Del	Del_1p36.31	0.95	1
11p-Del	Del_4q34.3	0.95	1
6p-Del	Del_11q23.3	0.95	1
Amp_6q12	Del_6q26	0.95	1
Del_3q13.31	Del_5p15.31	0.95	1
BTK	OR4S2	0.951	1
BTK	USP9X	0.951	1
C7orf58	16q-Del	0.951	1
CAMTA1	SLC38A4	0.951	1
CNTN5	PDGFRA	0.951	1
CNTN5	SELP	0.951	1
CNTN5	TRERF1	0.951	1
CPA3	KCND2	0.951	1
CTNNB1	XIRP2	0.951	1
CYP3A4	KCND2	0.951	1
HRAS	Del_10q23.31	0.951	1
IDH1	Del_16q12.1	0.951	1
KCND2	PPP6C	0.951	1
KRTAP5-10	SLC9A11	0.951	1
KRTAP5-10	6p-Amp	0.951	1
KYNU	XIRP2	0.951	1
MAP2K1	XIRP2	0.951	1
MLL	PTPN22	0.951	1
MLL	8p-Amp	0.951	1
PDGFRA	17p-Del	0.951	1
RELN	Del_12q23.3	0.951	1
TRERF1	17p-Del	0.951	1
USP9X	Amp_12q15	0.951	1
20q-Amp	Del_10q23.31	0.951	1
7p-Amp	Amp_8q24.21	0.951	1
8p-Amp	Amp_5p15.33	0.951	1
Amp_1p12	Del_6q21	0.951	1
Amp_4q12	Del_16q12.1	0.951	1
Amp_11q13.3	Del_16q24.3	0.951	1
Amp_12q15	Del_14q23.3	0.951	1
ANO4	6q-Del	0.952	1
APCS	MYO16	0.952	1
ARID2	MLL	0.952	1
ARID2	NRAS	0.952	1
C7orf58	Del_12q23.3	0.952	1
CBL	EZH2	0.952	1
CBL	GLI1	0.952	1
CBL	KIT	0.952	1
CBL	KRT73	0.952	1
CCNA1	EPHA6	0.952	1
CCNA1	FLT1	0.952	1
CCNA1	NGF	0.952	1
CCNA1	Del_4q34.3	0.952	1
CYP3A5	EPHA7	0.952	1
EPHA6	KIT	0.952	1
EPHA6	KRT73	0.952	1
EPHA6	RIPK4	0.952	1
EPHA7	IGF1R	0.952	1
EZH2	FLT1	0.952	1
EZH2	KEL	0.952	1
KIT	OR6C74	0.952	1
KIT	RB1	0.952	1
KRT73	THSD7B	0.952	1
MYO16	SYK	0.952	1
NGF	RIPK4	0.952	1
OR4S2	USH2A	0.952	1
RAC1	TPTE	0.952	1
RAC1	Amp_1q21.3	0.952	1
RIPK4	THSD7B	0.952	1
USP17L2	Del_12q23.3	0.952	1
14q-Del	Amp_5p15.33	0.952	1
Amp_7q34	Del_4p16.3	0.952	1
Amp_13q31.3	Del_6q26	0.952	1
Del_1p36.31	Del_11q23.3	0.952	1
Del_5q12.1	Del_13q34	0.952	1
Del_8p23.3	Del_15q13.3	0.952	1
Del_10p15.3	Del_15q13.3	0.952	1
Del_12q23.3	Del_Xp21.1	0.952	1
ARID2	Del_6q26	0.953	1
C10orf28	Del_5q12.1	0.953	1
CAMTA1	OR4S2	0.953	1
CCK	SLC9A11	0.953	1
CDK4	Del_4p16.3	0.953	1
CDKN2A	Del_4q34.3	0.953	1
EPHA4	KIT	0.953	1
EPHA4	KRT73	0.953	1
FAM58A	SLC9A11	0.953	1
GNAQ	6p-Amp	0.953	1
HRAS	Del_10q26.3	0.953	1
HSD11B1	1q-Amp	0.953	1
KRAS	Amp_12q14.1	0.953	1
MPP7	Del_6q21	0.953	1
NUDT11	Amp_17q25.3	0.953	1
OR4S2	RELN	0.953	1
OXA1L	Del_6q26	0.953	1
RPTN	9q-Del	0.953	1
S100A8	Amp_17q25.3	0.953	1
6p-Del	Amp_1p12	0.953	1
6p-Del	Amp_7p22.1	0.953	1
6q-Del	Amp_7q34	0.953	1
9q-Del	Amp_1q21.3	0.953	1
Amp_1p12	Amp_17q25.3	0.953	1
Amp_6p24.3	Del_4q34.3	0.953	1
Amp_7q34	Del_10q23.31	0.953	1
Amp_11q13.3	Del_15q13.3	0.953	1
Del_1p22.1	Del_6q21	0.953	1
Del_3q13.31	Del_16q23.1	0.953	1
Del_4p16.3	Del_6q21	0.953	1
BRAF	CDKN2A	0.954	1
BRAF	22q-Amp	0.954	1
C10orf28	XIRP2	0.954	1
CDKN2A	DDX3X	0.954	1
CDKN2A	RAC1	0.954	1
CNTN5	MLL	0.954	1
CYP3A5	DSG3	0.954	1
CYP3A5	11p-Del	0.954	1
DDX3X	EPHA4	0.954	1
EMG1	XIRP2	0.954	1
EPHA4	PPP6C	0.954	1
EPHA4	RAC1	0.954	1
FRMPD4	Del_12q23.3	0.954	1
GML	Amp_1p12	0.954	1
GML	Del_15q13.3	0.954	1
HRAS	Del_8p23.3	0.954	1
MPP7	Del_4p16.3	0.954	1
MPP7	Del_9p23	0.954	1
NGF	Del_12q23.3	0.954	1
OR6C74	Del_12q23.3	0.954	1
POTEG	Del_8p23.3	0.954	1
RB1	Del_12q23.3	0.954	1
RQCD1	Del_13q34	0.954	1
SELP	11q-Del	0.954	1
USH2A	USP17L2	0.954	1
20p-Amp	Del_15q21.1	0.954	1
10p-Del	Amp_12q14.1	0.954	1
14q-Del	Amp_13q31.3	0.954	1
5q-Del	Del_14q23.3	0.954	1
Amp_6p24.3	Del_16q12.1	0.954	1
Amp_6q12	Amp_11q13.3	0.954	1
Del_2q37.3	Del_8p23.3	0.954	1
ACSBG1	CDK4	0.955	1
ACSBG1	NUDT11	0.955	1
ACSBG1	OXA1L	0.955	1
ACSBG1	PARM1	0.955	1
ACSBG1	S100A8	0.955	1
APCS	CDK4	0.955	1
APCS	OXA1L	0.955	1
APCS	PARM1	0.955	1
APCS	S100A8	0.955	1
BRAF	Del_1p22.1	0.955	1
BTK	Del_13q34	0.955	1
C10orf28	IDH1	0.955	1
C10orf28	MAN1A1	0.955	1
C15orf23	SYK	0.955	1
C15orf23	Amp_17q25.3	0.955	1
CDK4	CYP3A5	0.955	1
CDKN2A	NUP214	0.955	1
CTNNA3	STK19	0.955	1
CYP3A5	GUCY2F	0.955	1
CYP3A5	PARM1	0.955	1
CYP3A5	S100A8	0.955	1
EMG1	IDH1	0.955	1
FRMPD4	11q-Del	0.955	1
GNAQ	Amp_7q34	0.955	1
GUCY2F	MPP7	0.955	1
IDH1	Del_12q23.3	0.955	1
IGF1R	OXA1L	0.955	1
KRTAP5-10	PTEN	0.955	1
KRTAP5-10	7p-Amp	0.955	1
MSTN	22q-Amp	0.955	1
NAP1L2	ZNF780B	0.955	1
NUDT11	SYK	0.955	1
PTEN	8q-Amp	0.955	1
PTPN11	SYK	0.955	1
RIPK4	Del_10q21.1	0.955	1
S100A8	SYK	0.955	1
SLC27A5	TPTE	0.955	1
TP53	TRERF1	0.955	1
TP63	16q-Del	0.955	1
ZNF780B	22q-Amp	0.955	1
13q-Amp	Del_10q23.31	0.955	1
13q-Amp	Del_16q23.1	0.955	1
20p-Amp	Amp_6p24.3	0.955	1
20p-Amp	Del_Xp21.1	0.955	1
8p-Amp	11p-Del	0.955	1
18p-Del	Amp_6p24.3	0.955	1
6q-Del	Amp_1p12	0.955	1
Amp_4q12	Del_12q23.3	0.955	1
Amp_7p22.1	Del_19p13.3	0.955	1
Del_1p36.31	Del_10p15.3	0.955	1
ARID2	HRAS	0.956	1
C7orf58	HRAS	0.956	1
CDC42BPA	5q-Del	0.956	1
CTNNB1	NF1	0.956	1
CTNNB1	8p-Amp	0.956	1
CYP3A4	6q-Del	0.956	1
DSG3	OR4S2	0.956	1
KRT73	5q-Del	0.956	1
KYNU	NF1	0.956	1
KYNU	PDGFRA	0.956	1
KYNU	TRERF1	0.956	1
NGF	TP53	0.956	1
OR4S2	TP53	0.956	1
OR6C74	TP53	0.956	1
TP53	USP9X	0.956	1
TP63	7q-Amp	0.956	1
TPTE	16q-Del	0.956	1
8p-Amp	Amp_15q26.2	0.956	1
11p-Del	Amp_6p24.3	0.956	1
Amp_1p12	Del_6q26	0.956	1
Amp_7q34	Del_15q21.1	0.956	1
Del_5p15.31	Del_6q26	0.956	1
APCS	Del_4p16.3	0.957	1
BRAF	CYP3A5	0.957	1
C10orf28	FLT1	0.957	1
C7orf58	Amp_7p22.1	0.957	1
CCK	Amp_1q21.3	0.957	1
CNTN5	FRMPD4	0.957	1
CTNNA3	DDX3X	0.957	1
CTNNA3	RAC1	0.957	1
DSG3	17p-Del	0.957	1
EMG1	Del_4q34.3	0.957	1
IGF1R	MPP7	0.957	1
KCND2	PTPN11	0.957	1
KRAS	Amp_1q21.3	0.957	1
MYO16	Del_10p15.3	0.957	1
PPP6C	Amp_3p13	0.957	1
SYK	Amp_6p24.3	0.957	1
TPTE	Del_10q23.31	0.957	1
20p-Amp	Del_10q21.1	0.957	1
22q-Amp	Del_4p16.3	0.957	1
10p-Del	Del_5p15.31	0.957	1
9q-Del	Amp_7p22.1	0.957	1
Amp_3p13	Amp_6q12	0.957	1
Del_9p21.3	Del_16p13.3	0.957	1
ALPK2	CYP3A5	0.958	1
ATP5F1	USP9X	0.958	1
BTK	KYNU	0.958	1
BTK	Amp_15q26.2	0.958	1
CPA3	MLL	0.958	1
CPA3	NRAS	0.958	1
CTNNB1	IDH1	0.958	1
CTNNB1	NUP214	0.958	1
DDX3X	NRAS	0.958	1
DMC1	Amp_13q31.3	0.958	1
FLT1	HRAS	0.958	1
GNAQ	USP9X	0.958	1
HRAS	KEL	0.958	1
HRAS	Del_1p36.31	0.958	1
HRAS	Del_4q34.3	0.958	1
IDH1	Amp_15q26.2	0.958	1
KRAS	USP9X	0.958	1
KYNU	Amp_12q15	0.958	1
LGR6	MLL	0.958	1
MAP2K1	NUP214	0.958	1
MAP2K1	ZFX	0.958	1
MAP2K1	Amp_4q12	0.958	1
MSTN	ZNF780B	0.958	1
MYO16	Amp_1q44	0.958	1
NRAS	TP53	0.958	1
10q-Del	Amp_7q34	0.958	1
11p-Del	5q-Del	0.958	1
16q-Del	Del_4q34.3	0.958	1
6q-Del	Del_5p15.31	0.958	1
Del_5p15.31	Del_10q26.3	0.958	1
Del_5p15.31	Del_Xp21.1	0.958	1
Del_5q31.3	Del_16q12.1	0.958	1
ALPK2	NGF	0.959	1
ALPK2	OR6C74	0.959	1
CCNA1	CYP3A4	0.959	1
CCNA1	DDX3X	0.959	1
CCNA1	LGR6	0.959	1
CDC42BPA	CPA3	0.959	1
CDC42BPA	PPP6C	0.959	1
CDC42BPA	RAC1	0.959	1
CNTN5	Amp_13q31.3	0.959	1
CPA3	KIT	0.959	1
CYP3A4	EZH2	0.959	1
CYP3A4	GLI1	0.959	1
CYP3A4	KIT	0.959	1
CYP3A4	RIPK4	0.959	1
DCLK3	RB1	0.959	1
DDX3X	EZH2	0.959	1
DMC1	NGF	0.959	1
DMC1	OR6C74	0.959	1
DSG3	Del_9p23	0.959	1
EZH2	PPP6C	0.959	1
EZH2	RAC1	0.959	1
FAM58A	6q-Del	0.959	1
GLI1	Amp_6q12	0.959	1
GML	RB1	0.959	1
HRAS	Del_Xp21.1	0.959	1
HSD11B1	USP9X	0.959	1
KIT	PPP6C	0.959	1
KRT73	LGR6	0.959	1
KRT73	PPP6C	0.959	1
KRT73	RAC1	0.959	1
KRTAP5-10	Del_19p13.3	0.959	1
NBPF1	OR6C74	0.959	1
NBPF1	RQCD1	0.959	1
NGF	POTEG	0.959	1
NGF	Del_11q23.3	0.959	1
NRAS	6q-Del	0.959	1
OR4S2	STK19	0.959	1
OR4S2	Del_3q13.31	0.959	1
OR6C74	Amp_22q13.2	0.959	1
OR6C74	Del_2q37.3	0.959	1
PARM1	RPTN	0.959	1
PARM1	Del_16q12.1	0.959	1
RAC1	RIPK4	0.959	1
RQCD1	Del_11q23.3	0.959	1
STK19	USP9X	0.959	1
STK19	Del_16q23.1	0.959	1
13q-Amp	Del_16q12.1	0.959	1
20q-Amp	Amp_4q12	0.959	1
7q-Amp	Amp_1q21.3	0.959	1
8q-Amp	Del_6q26	0.959	1
6p-Del	Del_10q23.31	0.959	1
Amp_6p24.3	Amp_11q13.3	0.959	1
Amp_13q31.3	Del_2q37.3	0.959	1
Del_5q12.1	Del_15q13.3	0.959	1
ALPK2	USP9X	0.96	1
ARID2	DCLK3	0.96	1
ARID2	FGFR2	0.96	1
ARID2	NBPF1	0.96	1
BTK	NBPF1	0.96	1
C10orf54	EPHA6	0.96	1
C7orf58	Del_10q23.31	0.96	1
DDX3X	RELN	0.96	1
DSG3	Amp_3p13	0.96	1
EMG1	RELN	0.96	1
EPHA6	PTPN11	0.96	1
FGFR2	NUP214	0.96	1
FRMPD4	7q-Amp	0.96	1
KRTAP5-10	RELN	0.96	1
LGR6	RELN	0.96	1
MAN1A1	POTEG	0.96	1
NBPF1	NUP214	0.96	1
NBPF1	Amp_12q15	0.96	1
POTEG	Del_5q12.1	0.96	1
RELN	SLC27A5	0.96	1
RIPK4	Del_10p15.3	0.96	1
TP63	Del_15q21.1	0.96	1
USP9X	Amp_8q24.21	0.96	1
1q-Amp	Del_13q34	0.96	1
20p-Amp	Amp_4q12	0.96	1
22q-Amp	Amp_5p15.33	0.96	1
6p-Amp	Del_10p15.3	0.96	1
8p-Amp	Amp_22q13.2	0.96	1
8q-Amp	Del_9p23	0.96	1
18p-Del	Amp_4q12	0.96	1
9p-Del	Del_15q13.3	0.96	1
Amp_1q44	Del_3q13.31	0.96	1
Amp_5p15.33	Del_4q34.3	0.96	1
Amp_17q25.3	Del_8p23.3	0.96	1
Del_4p16.3	Del_15q21.1	0.96	1
ACSBG1	KCND2	0.961	1
ANO4	CYP3A5	0.961	1
ARID2	Amp_15q26.2	0.961	1
ATP5F1	CDKN2A	0.961	1
BRAF	C7orf58	0.961	1
C10orf54	CTNNA3	0.961	1
C15orf23	USH2A	0.961	1
C7orf58	Amp_15q26.2	0.961	1
CCK	CDKN2A	0.961	1
CPA3	CYP3A4	0.961	1
CPA3	LGR6	0.961	1
CPA3	PPP6C	0.961	1
CPA3	10q-Del	0.961	1
CTNNA3	NUDT11	0.961	1
CTNNA3	OXA1L	0.961	1
CTNNA3	S100A8	0.961	1
CTNNB1	NAP1L2	0.961	1
CTNNB1	TTN	0.961	1
CTNNB1	8q-Amp	0.961	1
CYP3A4	PPP6C	0.961	1
CYP3A4	RAC1	0.961	1
CYP3A5	Amp_12q14.1	0.961	1
CYP3A5	Del_16p13.3	0.961	1
DDX3X	Amp_6q12	0.961	1
FRMPD4	NBPF1	0.961	1
GNAQ	Amp_8q24.21	0.961	1
HRAS	10q-Del	0.961	1
IGF1R	Amp_12q14.1	0.961	1
KCND2	Amp_1p12	0.961	1
KCND2	Del_4p16.3	0.961	1
KRAS	Del_6q26	0.961	1
KYNU	NAP1L2	0.961	1
KYNU	7p-Amp	0.961	1
LGR6	PPP6C	0.961	1
LGR6	RAC1	0.961	1
MPP7	Del_9p21.3	0.961	1
TTN	ZNF780B	0.961	1
13q-Amp	Del_10q26.3	0.961	1
20q-Amp	Amp_7p22.1	0.961	1
20q-Amp	Del_10q26.3	0.961	1
11p-Del	Amp_1q44	0.961	1
11q-Del	Del_5q31.3	0.961	1
Amp_1q44	Amp_7q34	0.961	1
Amp_5p15.33	Amp_7p22.1	0.961	1
Del_1p36.31	Del_6q21	0.961	1
ANO4	NGF	0.962	1
ANO4	OR6C74	0.962	1
APC	CTNNA3	0.962	1
ATP5F1	KYNU	0.962	1
ATP5F1	MAP2K1	0.962	1
C10orf54	EZH2	0.962	1
C10orf54	KIT	0.962	1
C10orf54	KRT73	0.962	1
CCNA1	NUDT11	0.962	1
CCNA1	PTPN11	0.962	1
CCNA1	S100A8	0.962	1
CDC42BPA	8q-Amp	0.962	1
CDKN2A	MSTN	0.962	1
CTNNA3	PDGFRA	0.962	1
CTNNA3	PTPN22	0.962	1
CTNNA3	SELP	0.962	1
CTNNB1	GNAQ	0.962	1
CYP3A4	TP63	0.962	1
CYP3A4	Del_16q24.3	0.962	1
EZH2	OXA1L	0.962	1
EZH2	S100A8	0.962	1
GLI1	NUDT11	0.962	1
GLI1	OXA1L	0.962	1
GLI1	S100A8	0.962	1
HRAS	XIRP2	0.962	1
KIT	OXA1L	0.962	1
KIT	S100A8	0.962	1
KRT73	NUDT11	0.962	1
NBPF1	RELN	0.962	1
NRAS	Amp_1p12	0.962	1
PTPN11	RIPK4	0.962	1
RAC1	8q-Amp	0.962	1
RELN	20p-Amp	0.962	1
RIPK4	S100A8	0.962	1
USH2A	Del_4p16.3	0.962	1
Amp_1q21.3	Del_10p15.3	0.962	1
Amp_7q34	Amp_20q13.33	0.962	1
Del_4p16.3	Del_10q21.1	0.962	1
ACSBG1	RELN	0.963	1
APC	RQCD1	0.963	1
APCS	RELN	0.963	1
C7orf58	EPHA4	0.963	1
C7orf58	10q-Del	0.963	1
CAMTA1	CNTN5	0.963	1
CBL	PDGFRA	0.963	1
COL3A1	Amp_17q25.3	0.963	1
CPA3	FRMPD4	0.963	1
CTNNA3	17p-Del	0.963	1
EMG1	16q-Del	0.963	1
EPHA4	GML	0.963	1
EPHA6	NBPF1	0.963	1
EPHA6	ZFX	0.963	1
IGF1R	RELN	0.963	1
NGF	PTPN22	0.963	1
OR6C74	PDGFRA	0.963	1
OR6C74	TRERF1	0.963	1
PTPN22	RQCD1	0.963	1
RELN	SYK	0.963	1
STK19	USH2A	0.963	1
TTN	7q-Amp	0.963	1
USH2A	17p-Del	0.963	1
10q-Del	Del_4p16.3	0.963	1
11q-Del	Del_4p16.3	0.963	1
17p-Del	Amp_22q13.2	0.963	1
17p-Del	Del_9p21.3	0.963	1
6p-Del	Del_5q12.1	0.963	1
Amp_6p24.3	Amp_12q14.1	0.963	1
Amp_7q34	Del_13q34	0.963	1
Amp_17q25.3	Del_6q26	0.963	1
ANO4	USP9X	0.964	1
ATP5F1	MLL	0.964	1
C10orf28	1q-Amp	0.964	1
C10orf54	MYO3B	0.964	1
C15orf23	CDKN2A	0.964	1
C15orf23	EZH2	0.964	1
CCNA1	EPHA7	0.964	1
CCNA1	GUCY2F	0.964	1
CDC42BPA	GUCY2F	0.964	1
CDC42BPA	MYO16	0.964	1
CDC42BPA	SELP	0.964	1
CDKN2A	20q-Amp	0.964	1
CTNNB1	Del_6q21	0.964	1
EPHA7	EZH2	0.964	1
EZH2	13q-Amp	0.964	1
GLI1	MYO16	0.964	1
GML	Del_11q23.3	0.964	1
GUCY2F	KIT	0.964	1
GUCY2F	KRT73	0.964	1
KIT	SELP	0.964	1
KIT	SLC38A4	0.964	1
KRAS	20q-Amp	0.964	1
KRAS	Amp_5p15.33	0.964	1
KRT73	MYO16	0.964	1
MYO16	RIPK4	0.964	1
MYO3B	PTPN11	0.964	1
MYO3B	S100A8	0.964	1
OXA1L	Del_6q21	0.964	1
PARM1	RIPK4	0.964	1
RIPK4	SELP	0.964	1
TP53	Amp_1p12	0.964	1
TPTE	Del_6q21	0.964	1
6p-Amp	11q-Del	0.964	1
8q-Amp	Amp_7p22.1	0.964	1
11p-Del	Del_15q13.3	0.964	1
5q-Del	Del_11q23.3	0.964	1
6q-Del	Amp_7p22.1	0.964	1
Amp_6p24.3	Del_15q21.1	0.964	1
Del_4p16.3	Del_10q23.31	0.964	1
Del_8p23.3	Del_10p15.3	0.964	1
APC	IDH1	0.965	1
BTK	MAN1A1	0.965	1
BTK	NUP214	0.965	1
C15orf23	TPTE	0.965	1
CDC42BPA	CNTN5	0.965	1
CNTN5	RIPK4	0.965	1
CTNNB1	STK19	0.965	1
FGFR2	KEL	0.965	1
FLT1	GML	0.965	1
GNAQ	Amp_7p22.1	0.965	1
HRAS	SLC38A4	0.965	1
HSD11B1	KYNU	0.965	1
KEL	SELP	0.965	1
KYNU	STK19	0.965	1
KYNU	Del_4q34.3	0.965	1
MAP2K1	STK19	0.965	1
NUP214	Amp_12q15	0.965	1
SLC9A11	9q-Del	0.965	1
SLC9A11	Del_1p22.1	0.965	1
ZNF780B	17p-Del	0.965	1
6p-Amp	Amp_17q25.3	0.965	1
8p-Amp	Amp_13q31.3	0.965	1
10q-Del	Amp_20q13.33	0.965	1
14q-Del	Del_15q21.1	0.965	1
18p-Del	Del_4q34.3	0.965	1
6q-Del	Del_8p23.3	0.965	1
Amp_7q34	Del_6q26	0.965	1
Amp_8q24.21	Del_4p16.3	0.965	1
Amp_12q15	Del_5p15.31	0.965	1
Amp_15q26.2	Del_4q34.3	0.965	1
Del_1p22.1	Del_3q13.31	0.965	1
Del_2q37.3	Del_10p15.3	0.965	1
ACSBG1	CTNNA3	0.966	1
APCS	CTNNA3	0.966	1
APCS	EMG1	0.966	1
ARID2	MPP7	0.966	1
C10orf28	CYP3A5	0.966	1
C10orf28	SELP	0.966	1
C10orf28	SLC38A4	0.966	1
C10orf28	SYK	0.966	1
C10orf28	11q-Del	0.966	1
C7orf58	SLC9A11	0.966	1
C7orf58	Del_10q21.1	0.966	1
CAMTA1	RQCD1	0.966	1
CBL	MSTN	0.966	1
CBL	NAP1L2	0.966	1
CNTN5	MAN1A1	0.966	1
CYP3A5	XIRP2	0.966	1
DSG3	9p-Del	0.966	1
EMG1	11q-Del	0.966	1
EPHA4	FGFR2	0.966	1
EPHA4	NBPF1	0.966	1
GNAQ	Del_15q13.3	0.966	1
IGF1R	Amp_3p13	0.966	1
MPP7	Del_5q12.1	0.966	1
MSTN	NGF	0.966	1
MSTN	OR6C74	0.966	1
MSTN	RB1	0.966	1
NGF	PTEN	0.966	1
OR6C74	ZNF780B	0.966	1
POTEG	SLC9A11	0.966	1
SLC9A11	Del_5q12.1	0.966	1
14q-Del	Del_1p22.1	0.966	1
5q-Del	Amp_5p15.33	0.966	1
Amp_7q34	Del_10q26.3	0.966	1
Amp_12q14.1	Del_6q21	0.966	1
Amp_15q26.2	Del_3q13.31	0.966	1
Amp_15q26.2	Del_19p13.3	0.966	1
APCS	OR4S2	0.967	1
APCS	USP9X	0.967	1
ARID2	PDGFRA	0.967	1
ARID2	TP63	0.967	1
ATP5F1	BTK	0.967	1
ATP5F1	MAN1A1	0.967	1
ATP5F1	ZFX	0.967	1
BTK	KRAS	0.967	1
BTK	NF1	0.967	1
C10orf54	Del_13q34	0.967	1
C15orf23	RAC1	0.967	1
C7orf58	Del_16q24.3	0.967	1
CBL	SLC9A11	0.967	1
CCK	MAN1A1	0.967	1
CCK	NUP214	0.967	1
CCK	ZFX	0.967	1
CCK	Amp_4q12	0.967	1
CDKN2A	STK19	0.967	1
CNTN5	OR6C74	0.967	1
CNTN5	RB1	0.967	1
CNTN5	RQCD1	0.967	1
CNTN5	Del_12q23.3	0.967	1
COL3A1	KRTAP5-10	0.967	1
CPA3	DMC1	0.967	1
CPA3	GUCY2F	0.967	1
CPA3	NF1	0.967	1
CPA3	PARM1	0.967	1
CYP3A4	GML	0.967	1
CYP3A5	OR4S2	0.967	1
CYP3A5	USP9X	0.967	1
DMC1	PPP6C	0.967	1
EMG1	USH2A	0.967	1
FAM58A	NUP214	0.967	1
GML	LGR6	0.967	1
GML	Amp_6q12	0.967	1
GNAQ	ZFX	0.967	1
GNAQ	Amp_12q15	0.967	1
GUCY2F	PPP6C	0.967	1
HRAS	Del_1p22.1	0.967	1
HRAS	Del_4p16.3	0.967	1
IDH1	KRAS	0.967	1
KRAS	MAN1A1	0.967	1
KRAS	Amp_4q12	0.967	1
KRAS	Amp_12q15	0.967	1
KYNU	THSD7B	0.967	1
MAN1A1	NF1	0.967	1
OR4S2	SYK	0.967	1
RQCD1	6p-Amp	0.967	1
ZNF780B	11q-Del	0.967	1
10q-Del	Amp_13q31.3	0.967	1
11q-Del	Del_3q13.31	0.967	1
18p-Del	Del_13q34	0.967	1
Amp_3p13	Amp_17q25.3	0.967	1
Amp_20q13.33	Del_6q26	0.967	1
APCS	SLC9A11	0.968	1
CCNA1	DSG3	0.968	1
CCNA1	Del_4p16.3	0.968	1
CDKN2A	Del_10q23.31	0.968	1
CYP3A4	Del_12q23.3	0.968	1
DMC1	NUDT11	0.968	1
DSG3	GLI1	0.968	1
EMG1	Del_4p16.3	0.968	1
EPHA7	OR4S2	0.968	1
FRMPD4	SELP	0.968	1
FRMPD4	11p-Del	0.968	1
GLI1	TP53	0.968	1
KIT	MPP7	0.968	1
KIT	11p-Del	0.968	1
KRT73	Del_1p22.1	0.968	1
KRTAP5-10	USP17L2	0.968	1
MYO16	RPTN	0.968	1
OR4S2	SLC38A4	0.968	1
RIPK4	TP53	0.968	1
RIPK4	11p-Del	0.968	1
RIPK4	Del_4p16.3	0.968	1
S100A8	TP63	0.968	1
S100A8	Del_16q24.3	0.968	1
SELP	Del_16q12.1	0.968	1
SYK	Del_11q23.3	0.968	1
USP17L2	ZNF780B	0.968	1
13q-Amp	20q-Amp	0.968	1
20q-Amp	7q-Amp	0.968	1
20q-Amp	Del_6q21	0.968	1
20q-Amp	Del_19p13.3	0.968	1
7q-Amp	Del_13q34	0.968	1
10q-Del	Amp_1p12	0.968	1
17p-Del	Del_19p13.3	0.968	1
6p-Del	Del_4q34.3	0.968	1
6p-Del	Del_16p13.3	0.968	1
Amp_11q13.3	Amp_12q14.1	0.968	1
Amp_20q13.33	Del_6q21	0.968	1
ATP5F1	Del_8p23.3	0.969	1
BTK	NAP1L2	0.969	1
CBL	THSD7B	0.969	1
FRMPD4	SYK	0.969	1
GNAQ	NF1	0.969	1
GNAQ	Del_15q21.1	0.969	1
HRAS	KCND2	0.969	1
KRAS	NF1	0.969	1
KRAS	Del_6q21	0.969	1
KYNU	9q-Del	0.969	1
MAN1A1	NAP1L2	0.969	1
NRAS	9p-Del	0.969	1
OR4S2	USP17L2	0.969	1
PPP6C	TP53	0.969	1
PTEN	Del_8p23.3	0.969	1
TPTE	USP17L2	0.969	1
22q-Amp	Del_8p23.3	0.969	1
10p-Del	Del_16q12.1	0.969	1
9q-Del	Amp_15q26.2	0.969	1
Amp_1q44	Amp_22q13.2	0.969	1
ALPK2	EZH2	0.97	1
APC	USH2A	0.97	1
ARID2	BTK	0.97	1
ARID2	9q-Del	0.97	1
ARID2	Amp_1q21.3	0.97	1
C15orf23	MYO3B	0.97	1
C7orf58	ZFX	0.97	1
CNTN5	EPHA4	0.97	1
COL3A1	CPA3	0.97	1
COL3A1	DDX3X	0.97	1
COL3A1	LGR6	0.97	1
DCLK3	Del_11q23.3	0.97	1
DSG3	7q-Amp	0.97	1
EMG1	Del_5q31.3	0.97	1
FRMPD4	Amp_7p22.1	0.97	1
HRAS	Del_10q21.1	0.97	1
IDH1	XIRP2	0.97	1
KIT	Amp_20q13.33	0.97	1
KRTAP5-10	Del_8p23.3	0.97	1
MPP7	TP63	0.97	1
MYO3B	17p-Del	0.97	1
NF1	ZNF780B	0.97	1
POTEG	Del_11q23.3	0.97	1
PTEN	Amp_13q31.3	0.97	1
RB1	Del_16q23.1	0.97	1
20p-Amp	Del_10q23.31	0.97	1
8p-Amp	Amp_1q44	0.97	1
10p-Del	Amp_1p12	0.97	1
14q-Del	9q-Del	0.97	1
14q-Del	Amp_12q15	0.97	1
Amp_1p12	Del_9p23	0.97	1
Amp_4q12	Del_6q26	0.97	1
Amp_12q15	Del_5q12.1	0.97	1
Amp_15q26.2	Del_10q21.1	0.97	1
Amp_15q26.2	Del_10q23.31	0.97	1
Del_2q37.3	Del_16q23.1	0.97	1
Del_8p23.3	Del_16q12.1	0.97	1
Del_14q23.3	Del_15q21.1	0.97	1
APC	RELN	0.971	1
APCS	Del_16q23.1	0.971	1
ARID2	ATP5F1	0.971	1
ARID2	CPA3	0.971	1
ARID2	CYP3A4	0.971	1
ARID2	FAM58A	0.971	1
ARID2	GNAQ	0.971	1
ATP5F1	C7orf58	0.971	1
ATP5F1	HSD11B1	0.971	1
ATP5F1	STK19	0.971	1
C10orf28	CCNA1	0.971	1
C10orf28	CDC42BPA	0.971	1
C10orf28	EZH2	0.971	1
C10orf28	GLI1	0.971	1
C10orf28	RIPK4	0.971	1
C10orf54	DCLK3	0.971	1
C10orf54	FGFR2	0.971	1
C10orf54	NBPF1	0.971	1
C7orf58	CPA3	0.971	1
C7orf58	LGR6	0.971	1
CCK	HSD11B1	0.971	1
CCK	Del_5q12.1	0.971	1
COL3A1	IGF1R	0.971	1
COL3A1	SYK	0.971	1
CPA3	Del_5q12.1	0.971	1
CTNNB1	6q-Del	0.971	1
CTNNB1	Del_9p21.3	0.971	1
CYP3A4	Del_5q12.1	0.971	1
EPHA4	PDGFRA	0.971	1
EPHA6	USP17L2	0.971	1
EZH2	KCND2	0.971	1
GNAQ	STK19	0.971	1
GUCY2F	RELN	0.971	1
HSD11B1	KRAS	0.971	1
HSD11B1	MAN1A1	0.971	1
HSD11B1	NUP214	0.971	1
HSD11B1	ZFX	0.971	1
KEL	MPP7	0.971	1
NRAS	POTEG	0.971	1
NUP214	STK19	0.971	1
OR6C74	USH2A	0.971	1
PARM1	RELN	0.971	1
POTEG	S100A8	0.971	1
POTEG	Del_9p23	0.971	1
PTPN11	Del_2q37.3	0.971	1
S100A8	Del_2q37.3	0.971	1
STK19	Amp_4q12	0.971	1
STK19	Amp_12q15	0.971	1
8p-Amp	Amp_11q13.3	0.971	1
14q-Del	Del_5q12.1	0.971	1
5q-Del	Del_15q13.3	0.971	1
6p-Del	Del_5p15.31	0.971	1
Amp_13q31.3	Del_16q23.1	0.971	1
Amp_15q26.2	Amp_20q13.33	0.971	1
Del_1p36.31	Del_4p16.3	0.971	1
ACSBG1	KYNU	0.972	1
APCS	KYNU	0.972	1
BTK	TP63	0.972	1
C10orf54	TP53	0.972	1
CBL	RB1	0.972	1
CBL	RPTN	0.972	1
CDK4	11p-Del	0.972	1
CDK4	Amp_8q24.21	0.972	1
CPA3	FGFR2	0.972	1
CYP3A4	NBPF1	0.972	1
CYP3A5	KYNU	0.972	1
DCLK3	LGR6	0.972	1
DCLK3	Del_2q37.3	0.972	1
DMC1	TTN	0.972	1
DMC1	13q-Amp	0.972	1
DSG3	EPHA7	0.972	1
DSG3	OXA1L	0.972	1
DSG3	PTPN11	0.972	1
EPHA4	MSTN	0.972	1
GLI1	TPTE	0.972	1
GML	GUCY2F	0.972	1
IGF1R	KYNU	0.972	1
KCND2	SLC9A11	0.972	1
KEL	PDGFRA	0.972	1
KEL	TRERF1	0.972	1
KIT	TPTE	0.972	1
KYNU	SYK	0.972	1
MPP7	OR4S2	0.972	1
NBPF1	RAC1	0.972	1
NGF	OR6C74	0.972	1
NGF	RB1	0.972	1
NGF	RPTN	0.972	1
NRAS	XIRP2	0.972	1
OR6C74	RB1	0.972	1
OR6C74	RQCD1	0.972	1
PARM1	TP63	0.972	1
RB1	RQCD1	0.972	1
RB1	Del_16q12.1	0.972	1
TP63	13q-Amp	0.972	1
13q-Amp	8q-Amp	0.972	1
13q-Amp	Amp_8q24.21	0.972	1
20p-Amp	18p-Del	0.972	1
6p-Amp	Del_1p36.31	0.972	1
Amp_4q12	Del_16q24.3	0.972	1
Amp_6p24.3	Amp_6q12	0.972	1
Amp_7p22.1	Amp_17q25.3	0.972	1
Amp_7p22.1	Del_16q12.1	0.972	1
Del_3q13.31	Del_6q21	0.972	1
ACSBG1	RPTN	0.973	1
ANO4	GLI1	0.973	1
APC	OXA1L	0.973	1
APC	PTPN11	0.973	1
APC	SLC9A11	0.973	1
APCS	Del_16q12.1	0.973	1
ARID2	MSTN	0.973	1
ATP5F1	KEL	0.973	1
C10orf28	NRAS	0.973	1
C10orf54	MSTN	0.973	1
C10orf54	PDGFRA	0.973	1
C10orf54	SLC27A5	0.973	1
C10orf54	ZNF780B	0.973	1
C10orf54	Del_5p15.31	0.973	1
C15orf23	GUCY2F	0.973	1
C7orf58	KRTAP5-10	0.973	1
C7orf58	SLC27A5	0.973	1
CAMTA1	FRMPD4	0.973	1
CBL	TPTE	0.973	1
CCNA1	USP9X	0.973	1
CDK4	KRTAP5-10	0.973	1
CDK4	MSTN	0.973	1
CDK4	8p-Amp	0.973	1
CDK4	Del_5p15.31	0.973	1
CDKN2A	10q-Del	0.973	1
CNTN5	FAM58A	0.973	1
CNTN5	KRAS	0.973	1
COL3A1	NBPF1	0.973	1
COL3A1	POTEG	0.973	1
CTNNB1	Amp_8q24.21	0.973	1
CYP3A5	RPTN	0.973	1
EPHA7	Del_12q23.3	0.973	1
FAM58A	KEL	0.973	1
FLT1	GNAQ	0.973	1
FRMPD4	MPP7	0.973	1
FRMPD4	NAP1L2	0.973	1
GLI1	OR4S2	0.973	1
GLI1	USP9X	0.973	1
GNAQ	Del_4q34.3	0.973	1
GUCY2F	PARM1	0.973	1
HRAS	MYO3B	0.973	1
IDH1	KEL	0.973	1
KIT	OR4S2	0.973	1
KRAS	Del_4q34.3	0.973	1
KRT73	OR4S2	0.973	1
KRTAP5-10	OXA1L	0.973	1
MYO3B	Del_4p16.3	0.973	1
NUDT11	SLC27A5	0.973	1
NUDT11	ZNF780B	0.973	1
NUP214	TPTE	0.973	1
OR6C74	TPTE	0.973	1
OXA1L	SLC27A5	0.973	1
OXA1L	TRERF1	0.973	1
OXA1L	ZNF780B	0.973	1
PDGFRA	S100A8	0.973	1
POTEG	11q-Del	0.973	1
PTPN11	SLC27A5	0.973	1
PTPN11	ZNF780B	0.973	1
PTPN22	S100A8	0.973	1
PTPN22	STK19	0.973	1
S100A8	ZNF780B	0.973	1
SYK	Del_12q23.3	0.973	1
SYK	Del_16q12.1	0.973	1
TPTE	ZFX	0.973	1
TPTE	Del_4p16.3	0.973	1
TRERF1	Del_12q23.3	0.973	1
20p-Amp	11q-Del	0.973	1
7p-Amp	Del_1p22.1	0.973	1
18p-Del	Amp_7q34	0.973	1
6q-Del	Amp_1q44	0.973	1
6q-Del	Amp_8q24.21	0.973	1
Amp_3p13	Amp_12q14.1	0.973	1
Amp_4q12	Del_19p13.3	0.973	1
Del_2q37.3	Del_6q26	0.973	1
Del_3q13.31	Del_5q31.3	0.973	1
Del_5p15.31	Del_12q23.3	0.973	1
ACSBG1	6q-Del	0.974	1
ALPK2	OXA1L	0.974	1
ANO4	KYNU	0.974	1
ARID2	NAP1L2	0.974	1
ARID2	PTEN	0.974	1
C10orf28	CTNNA3	0.974	1
C7orf58	CAMTA1	0.974	1
C7orf58	NAP1L2	0.974	1
CCNA1	CTNNA3	0.974	1
CDC42BPA	CTNNA3	0.974	1
CTNNA3	GLI1	0.974	1
CTNNA3	RIPK4	0.974	1
DCLK3	Del_16q12.1	0.974	1
EPHA6	HSD11B1	0.974	1
EPHA6	STK19	0.974	1
FGFR2	TP63	0.974	1
FRMPD4	Del_6q26	0.974	1
MPP7	RPTN	0.974	1
MPP7	Del_16q12.1	0.974	1
PTEN	Del_5q12.1	0.974	1
RQCD1	Del_10p15.3	0.974	1
16q-Del	Del_2q37.3	0.974	1
Amp_3p13	Del_3q13.31	0.974	1
Amp_13q31.3	Del_14q23.3	0.974	1
Amp_13q31.3	Del_16q12.1	0.974	1
Amp_15q26.2	Del_10q26.3	0.974	1
Del_1p36.31	Del_16q24.3	0.974	1
Del_1p22.1	Del_14q23.3	0.974	1
ACSBG1	ATP5F1	0.975	1
APCS	ATP5F1	0.975	1
ATP5F1	IGF1R	0.975	1
ATP5F1	SYK	0.975	1
C10orf28	DMC1	0.975	1
CCK	CYP3A5	0.975	1
CCK	SYK	0.975	1
CDK4	Amp_7p22.1	0.975	1
CDKN2A	Del_10q26.3	0.975	1
CNTN5	Del_2q37.3	0.975	1
COL3A1	MAP2K1	0.975	1
CPA3	KEL	0.975	1
CPA3	KRTAP5-10	0.975	1
CTNNB1	USP17L2	0.975	1
CYP3A4	KRTAP5-10	0.975	1
CYP3A4	ZNF780B	0.975	1
CYP3A4	Del_Xp21.1	0.975	1
CYP3A5	KRAS	0.975	1
DDX3X	MSTN	0.975	1
DSG3	RELN	0.975	1
FLT1	LGR6	0.975	1
GML	USH2A	0.975	1
GNAQ	IGF1R	0.975	1
GNAQ	SYK	0.975	1
IGF1R	KRAS	0.975	1
KCND2	USP9X	0.975	1
KRTAP5-10	LGR6	0.975	1
LGR6	ZNF780B	0.975	1
MSTN	RAC1	0.975	1
OXA1L	Amp_7p22.1	0.975	1
PPP6C	ZNF780B	0.975	1
TPTE	10q-Del	0.975	1
13q-Amp	10q-Del	0.975	1
13q-Amp	Del_15q21.1	0.975	1
20p-Amp	Del_10q26.3	0.975	1
6p-Amp	Amp_11q13.3	0.975	1
7p-Amp	Amp_1p12	0.975	1
7q-Amp	Del_10q21.1	0.975	1
10p-Del	Amp_20q13.33	0.975	1
10q-Del	Del_5p15.31	0.975	1
Amp_1p12	Amp_5p15.33	0.975	1
Amp_1p12	Amp_7q34	0.975	1
Amp_6p24.3	Amp_7q34	0.975	1
Amp_8q24.21	Amp_20q13.33	0.975	1
ACSBG1	BTK	0.976	1
ACSBG1	MAN1A1	0.976	1
ANO4	CPA3	0.976	1
ANO4	FRMPD4	0.976	1
APC	LGR6	0.976	1
APC	PPP6C	0.976	1
APCS	BTK	0.976	1
APCS	IDH1	0.976	1
APCS	NUP214	0.976	1
BTK	CYP3A5	0.976	1
CAMTA1	CDK4	0.976	1
CAMTA1	S100A8	0.976	1
CPA3	PDGFRA	0.976	1
CPA3	TRERF1	0.976	1
CYP3A5	DCLK3	0.976	1
CYP3A5	MAN1A1	0.976	1
CYP3A5	NBPF1	0.976	1
CYP3A5	ZFX	0.976	1
DCLK3	HRAS	0.976	1
DCLK3	IGF1R	0.976	1
FGFR2	HRAS	0.976	1
FRMPD4	RELN	0.976	1
GLI1	RELN	0.976	1
HRAS	NBPF1	0.976	1
HSD11B1	22q-Amp	0.976	1
IGF1R	MAN1A1	0.976	1
IGF1R	ZFX	0.976	1
IGF1R	Amp_8q24.21	0.976	1
IGF1R	Amp_12q15	0.976	1
LGR6	PTPN22	0.976	1
NAP1L2	OXA1L	0.976	1
OR6C74	USP17L2	0.976	1
PDGFRA	Amp_6q12	0.976	1
PTPN22	RAC1	0.976	1
RAC1	8p-Amp	0.976	1
RELN	RQCD1	0.976	1
SLC27A5	Del_9p21.3	0.976	1
SYK	ZFX	0.976	1
SYK	Amp_8q24.21	0.976	1
SYK	Amp_12q15	0.976	1
TP53	Del_5q12.1	0.976	1
20p-Amp	7q-Amp	0.976	1
7p-Amp	Del_6q26	0.976	1
6p-Del	9q-Del	0.976	1
Amp_1q44	Del_10q21.1	0.976	1
Amp_7q34	Del_16q12.1	0.976	1
Del_1p36.31	Del_5q12.1	0.976	1
Del_3q13.31	Del_11q23.3	0.976	1
Del_3q13.31	Del_15q21.1	0.976	1
Del_8p23.3	Del_19p13.3	0.976	1
Del_15q21.1	Del_19p13.3	0.976	1
ARID2	CTNNA3	0.977	1
BTK	DSG3	0.977	1
BTK	TP53	0.977	1
C7orf58	CNTN5	0.977	1
CAMTA1	FLT1	0.977	1
CAMTA1	KEL	0.977	1
CBL	NRAS	0.977	1
CDKN2A	FGFR2	0.977	1
CDKN2A	POTEG	0.977	1
DCLK3	PTPN22	0.977	1
DCLK3	TRERF1	0.977	1
DSG3	13q-Amp	0.977	1
DSG3	Amp_7p22.1	0.977	1
EPHA7	MLL	0.977	1
EPHA7	17p-Del	0.977	1
FAM58A	TPTE	0.977	1
GNAQ	7p-Amp	0.977	1
KIT	MYO3B	0.977	1
KRAS	TPTE	0.977	1
KRT73	MYO3B	0.977	1
KYNU	7q-Amp	0.977	1
MYO16	17p-Del	0.977	1
MYO3B	RIPK4	0.977	1
NRAS	20q-Amp	0.977	1
NUP214	TP53	0.977	1
PARM1	TP53	0.977	1
POTEG	8p-Amp	0.977	1
PTEN	Del_1p36.31	0.977	1
SLC27A5	9q-Del	0.977	1
TP63	11q-Del	0.977	1
TP63	17p-Del	0.977	1
22q-Amp	Amp_7p22.1	0.977	1
7p-Amp	Del_13q34	0.977	1
11p-Del	Amp_7p22.1	0.977	1
11q-Del	Del_16q24.3	0.977	1
17p-Del	Del_16q24.3	0.977	1
9q-Del	Del_1p36.31	0.977	1
Amp_7p22.1	Amp_15q26.2	0.977	1
Amp_7p22.1	Del_10q21.1	0.977	1
Del_5q31.3	Del_11q23.3	0.977	1
Del_6q21	Del_15q13.3	0.977	1
ACSBG1	17p-Del	0.978	1
APCS	MLL	0.978	1
ARID2	STK19	0.978	1
ATP5F1	CDC42BPA	0.978	1
ATP5F1	EZH2	0.978	1
ATP5F1	GLI1	0.978	1
ATP5F1	KIT	0.978	1
ATP5F1	KRT73	0.978	1
ATP5F1	RIPK4	0.978	1
BTK	RELN	0.978	1
C10orf28	Del_13q34	0.978	1
C10orf54	CBL	0.978	1
C10orf54	RB1	0.978	1
C7orf58	PARM1	0.978	1
CBL	NUDT11	0.978	1
CCK	CCNA1	0.978	1
CCK	CDC42BPA	0.978	1
CCK	GLI1	0.978	1
CCK	KIT	0.978	1
CCNA1	GNAQ	0.978	1
CCNA1	SLC9A11	0.978	1
CDC42BPA	KYNU	0.978	1
CDC42BPA	SLC9A11	0.978	1
CDKN2A	USH2A	0.978	1
CDKN2A	Del_10q21.1	0.978	1
COL3A1	7q-Amp	0.978	1
CPA3	USP9X	0.978	1
CTNNB1	EZH2	0.978	1
CTNNB1	KIT	0.978	1
CYP3A5	MLL	0.978	1
DCLK3	GUCY2F	0.978	1
DDX3X	THSD7B	0.978	1
EPHA4	NRAS	0.978	1
EPHA7	POTEG	0.978	1
FAM58A	KIT	0.978	1
FAM58A	KRT73	0.978	1
GLI1	GNAQ	0.978	1
GLI1	KRAS	0.978	1
GLI1	KYNU	0.978	1
GUCY2F	POTEG	0.978	1
HRAS	PDGFRA	0.978	1
HRAS	Amp_6p24.3	0.978	1
KIT	KRAS	0.978	1
KYNU	MPP7	0.978	1
LGR6	OR4S2	0.978	1
NGF	OXA1L	0.978	1
NUP214	RELN	0.978	1
OR4S2	PPP6C	0.978	1
POTEG	SLC38A4	0.978	1
PPP6C	THSD7B	0.978	1
PTPN11	RQCD1	0.978	1
RAC1	THSD7B	0.978	1
SLC38A4	Del_2q37.3	0.978	1
TP53	Del_4p16.3	0.978	1
13q-Amp	20p-Amp	0.978	1
13q-Amp	Del_2q37.3	0.978	1
5q-Del	Del_6q26	0.978	1
Amp_1p12	Amp_12q14.1	0.978	1
Amp_17q25.3	Del_13q34	0.978	1
Del_3q13.31	Del_10q23.31	0.978	1
Del_5q31.3	Del_15q13.3	0.978	1
ACSBG1	TRERF1	0.979	1
APC	APCS	0.979	1
APC	SYK	0.979	1
APCS	PDGFRA	0.979	1
ATP5F1	MYO16	0.979	1
ATP5F1	SLC38A4	0.979	1
BRAF	18p-Del	0.979	1
C10orf28	MSTN	0.979	1
C10orf54	Del_3q13.31	0.979	1
C7orf58	CDKN2A	0.979	1
CBL	6p-Del	0.979	1
CCK	EPHA7	0.979	1
CCK	SELP	0.979	1
CNTN5	DDX3X	0.979	1
CTNNA3	USP9X	0.979	1
DMC1	USP9X	0.979	1
EPHA4	MAP2K1	0.979	1
GML	OR4S2	0.979	1
GUCY2F	ZNF780B	0.979	1
IGF1R	PDGFRA	0.979	1
IGF1R	TRERF1	0.979	1
KRAS	MYO16	0.979	1
KRAS	SLC38A4	0.979	1
KRTAP5-10	PARM1	0.979	1
KYNU	Del_5q31.3	0.979	1
MYO16	SELP	0.979	1
PARM1	ZNF780B	0.979	1
PTEN	6p-Amp	0.979	1
RB1	Del_15q13.3	0.979	1
RELN	Del_4p16.3	0.979	1
RPTN	TRERF1	0.979	1
RQCD1	10p-Del	0.979	1
SLC27A5	Del_9p23	0.979	1
SYK	TRERF1	0.979	1
7p-Amp	Del_16q12.1	0.979	1
8q-Amp	Amp_13q31.3	0.979	1
16q-Del	Del_5p15.31	0.979	1
17p-Del	Del_8p23.3	0.979	1
9q-Del	Del_14q23.3	0.979	1
Amp_4q12	Amp_20q13.33	0.979	1
Amp_12q14.1	Del_12q23.3	0.979	1
Amp_13q31.3	Del_16q24.3	0.979	1
Del_5p15.31	Del_16q12.1	0.979	1
ALPK2	C7orf58	0.98	1
ALPK2	DMC1	0.98	1
ALPK2	GML	0.98	1
ANO4	MYO16	0.98	1
APC	COL3A1	0.98	1
ATP5F1	RELN	0.98	1
BTK	USP17L2	0.98	1
C10orf28	FGFR2	0.98	1
C10orf28	NBPF1	0.98	1
C10orf54	XIRP2	0.98	1
C15orf23	KEL	0.98	1
C7orf58	EPHA6	0.98	1
CAMTA1	RAC1	0.98	1
CDC42BPA	TTN	0.98	1
CNTN5	RELN	0.98	1
CTNNA3	FLT1	0.98	1
DMC1	NRAS	0.98	1
DMC1	Amp_20q13.33	0.98	1
DMC1	Amp_22q13.2	0.98	1
DSG3	FGFR2	0.98	1
FGFR2	MLL	0.98	1
FLT1	GUCY2F	0.98	1
FRMPD4	TTN	0.98	1
HRAS	NAP1L2	0.98	1
KCND2	USP17L2	0.98	1
KEL	Del_4q34.3	0.98	1
KRAS	RELN	0.98	1
KRT73	TTN	0.98	1
LGR6	NAP1L2	0.98	1
LGR6	USH2A	0.98	1
MAN1A1	USP17L2	0.98	1
MLL	NBPF1	0.98	1
MLL	POTEG	0.98	1
MLL	USP17L2	0.98	1
MLL	Amp_13q31.3	0.98	1
MLL	Del_2q37.3	0.98	1
MYO3B	TTN	0.98	1
NAP1L2	RAC1	0.98	1
NF1	NGF	0.98	1
NF1	RB1	0.98	1
NRAS	11p-Del	0.98	1
NRAS	Del_9p21.3	0.98	1
PPP6C	22q-Amp	0.98	1
PTEN	5q-Del	0.98	1
7q-Amp	Del_8p23.3	0.98	1
7q-Amp	Del_16q12.1	0.98	1
8p-Amp	Del_10q23.31	0.98	1
16q-Del	Del_9p21.3	0.98	1
Amp_4q12	Del_6q21	0.98	1
Amp_5p15.33	Del_2q37.3	0.98	1
Del_1p36.31	Del_4q34.3	0.98	1
Del_5p15.31	Del_10q23.31	0.98	1
Del_5p15.31	Del_16q24.3	0.98	1
Del_8p23.3	Del_10q21.1	0.98	1
Del_16p13.3	Del_Xp21.1	0.98	1
ACSBG1	STK19	0.981	1
ANO4	ZFX	0.981	1
APC	GUCY2F	0.981	1
APCS	HSD11B1	0.981	1
ATP5F1	Amp_17q25.3	0.981	1
BTK	KRT73	0.981	1
BTK	RIPK4	0.981	1
BTK	THSD7B	0.981	1
C7orf58	FRMPD4	0.981	1
CAMTA1	DCLK3	0.981	1
CCNA1	NUP214	0.981	1
COL3A1	EZH2	0.981	1
COL3A1	KIT	0.981	1
COL3A1	NGF	0.981	1
CYP3A5	STK19	0.981	1
CYP3A5	Del_15q13.3	0.981	1
DSG3	KEL	0.981	1
EZH2	MAN1A1	0.981	1
EZH2	NUP214	0.981	1
FAM58A	MPP7	0.981	1
FRMPD4	OR4S2	0.981	1
GLI1	NUP214	0.981	1
GLI1	Amp_4q12	0.981	1
GNAQ	Del_4p16.3	0.981	1
HSD11B1	IGF1R	0.981	1
HSD11B1	KEL	0.981	1
HSD11B1	SYK	0.981	1
KCND2	KYNU	0.981	1
KIT	11q-Del	0.981	1
KRAS	Amp_17q25.3	0.981	1
KRT73	ZFX	0.981	1
LGR6	SLC9A11	0.981	1
MLL	THSD7B	0.981	1
RIPK4	ZFX	0.981	1
STK19	SYK	0.981	1
TP63	Amp_1p12	0.981	1
TP63	Del_9p21.3	0.981	1
TP63	Del_15q13.3	0.981	1
13q-Amp	8p-Amp	0.981	1
7q-Amp	9p-Del	0.981	1
8q-Amp	Del_9p21.3	0.981	1
11p-Del	Amp_1q21.3	0.981	1
Amp_15q26.2	Del_16q23.1	0.981	1
Amp_17q25.3	Del_9p23	0.981	1
Del_15q13.3	Del_16q24.3	0.981	1
ACSBG1	CAMTA1	0.982	1
ACSBG1	NAP1L2	0.982	1
APC	C10orf28	0.982	1
APCS	CAMTA1	0.982	1
ARID2	NGF	0.982	1
BTK	MYO16	0.982	1
BTK	SELP	0.982	1
BTK	SLC38A4	0.982	1
C10orf28	PDGFRA	0.982	1
C10orf28	TRERF1	0.982	1
C7orf58	OR6C74	0.982	1
CAMTA1	CYP3A5	0.982	1
CAMTA1	IGF1R	0.982	1
CAMTA1	SYK	0.982	1
CCK	GML	0.982	1
CDC42BPA	XIRP2	0.982	1
CNTN5	OXA1L	0.982	1
CPA3	RQCD1	0.982	1
CYP3A4	MAP2K1	0.982	1
CYP3A4	OR6C74	0.982	1
CYP3A4	RQCD1	0.982	1
DCLK3	EZH2	0.982	1
DDX3X	OR6C74	0.982	1
EPHA4	MPP7	0.982	1
EPHA7	SLC27A5	0.982	1
EPHA7	ZNF780B	0.982	1
EZH2	XIRP2	0.982	1
FAM58A	GML	0.982	1
FAM58A	KCND2	0.982	1
FGFR2	GLI1	0.982	1
FRMPD4	SLC9A11	0.982	1
GLI1	NBPF1	0.982	1
GLI1	POTEG	0.982	1
GLI1	RPTN	0.982	1
GML	GNAQ	0.982	1
GML	KRAS	0.982	1
GUCY2F	OR4S2	0.982	1
IDH1	MYO16	0.982	1
KIT	NBPF1	0.982	1
KIT	POTEG	0.982	1
KRAS	1q-Amp	0.982	1
KRT73	RPTN	0.982	1
KRTAP5-10	SELP	0.982	1
LGR6	OR6C74	0.982	1
LGR6	RQCD1	0.982	1
MAN1A1	SELP	0.982	1
MAN1A1	SLC38A4	0.982	1
MAP2K1	PPP6C	0.982	1
MAP2K1	Amp_6q12	0.982	1
MLL	USP9X	0.982	1
MSTN	MYO16	0.982	1
MSTN	SELP	0.982	1
MYO16	Amp_12q15	0.982	1
NF1	Del_11q23.3	0.982	1
NGF	Amp_6q12	0.982	1
PDGFRA	SLC38A4	0.982	1
POTEG	RIPK4	0.982	1
PPP6C	RQCD1	0.982	1
PTPN22	SLC38A4	0.982	1
RAC1	RQCD1	0.982	1
RB1	Amp_6q12	0.982	1
RQCD1	Del_5q12.1	0.982	1
SELP	TRERF1	0.982	1
SLC38A4	TRERF1	0.982	1
SLC38A4	ZFX	0.982	1
USP9X	20q-Amp	0.982	1
ZNF780B	Del_11q23.3	0.982	1
6p-Amp	16q-Del	0.982	1
6p-Amp	Del_15q13.3	0.982	1
7p-Amp	Del_6q21	0.982	1
8q-Amp	11p-Del	0.982	1
10p-Del	6p-Del	0.982	1
10p-Del	Amp_1q21.3	0.982	1
18p-Del	Del_16p13.3	0.982	1
6p-Del	Amp_17q25.3	0.982	1
Amp_7p22.1	Amp_22q13.2	0.982	1
Amp_11q13.3	Amp_17q25.3	0.982	1
ACSBG1	EPHA6	0.983	1
ANO4	C7orf58	0.983	1
BRAF	GLI1	0.983	1
BRAF	TTN	0.983	1
BTK	EPHA4	0.983	1
C10orf28	NGF	0.983	1
C10orf28	RQCD1	0.983	1
C10orf54	OXA1L	0.983	1
C15orf23	TTN	0.983	1
CCNA1	7q-Amp	0.983	1
CDKN2A	EZH2	0.983	1
COL3A1	FAM58A	0.983	1
COL3A1	GNAQ	0.983	1
CPA3	Del_10p15.3	0.983	1
CYP3A4	MYO16	0.983	1
CYP3A4	SELP	0.983	1
CYP3A4	Del_16q23.1	0.983	1
DDX3X	MYO16	0.983	1
EPHA4	MAN1A1	0.983	1
EPHA4	ZFX	0.983	1
EPHA6	IGF1R	0.983	1
EPHA7	LGR6	0.983	1
EPHA7	Del_4p16.3	0.983	1
GML	7p-Amp	0.983	1
HRAS	6q-Del	0.983	1
HSD11B1	XIRP2	0.983	1
KYNU	RPTN	0.983	1
OXA1L	RPTN	0.983	1
OXA1L	USP17L2	0.983	1
OXA1L	Amp_13q31.3	0.983	1
POTEG	TPTE	0.983	1
PTPN11	S100A8	0.983	1
RAC1	SELP	0.983	1
RPTN	S100A8	0.983	1
SLC38A4	Amp_6q12	0.983	1
TPTE	USP9X	0.983	1
10p-Del	Amp_6p24.3	0.983	1
11p-Del	Del_16p13.3	0.983	1
16q-Del	Del_5q12.1	0.983	1
18p-Del	Amp_20q13.33	0.983	1
5q-Del	Del_4q34.3	0.983	1
Amp_1p12	Amp_8q24.21	0.983	1
Amp_1p12	Amp_13q31.3	0.983	1
Amp_1p12	Del_8p23.3	0.983	1
Amp_1p12	Del_15q21.1	0.983	1
Amp_1q21.3	Del_5p15.31	0.983	1
Amp_1q44	Del_9p23	0.983	1
Amp_7q34	Amp_22q13.2	0.983	1
Amp_13q31.3	Del_15q13.3	0.983	1
Amp_15q26.2	Del_16q12.1	0.983	1
Del_16q24.3	Del_Xp21.1	0.983	1
ACSBG1	APCS	0.984	1
ATP5F1	CTNNA3	0.984	1
C15orf23	NGF	0.984	1
CAMTA1	EMG1	0.984	1
CAMTA1	PARM1	0.984	1
CAMTA1	PTPN22	0.984	1
CAMTA1	TRERF1	0.984	1
CDKN2A	S100A8	0.984	1
CYP3A5	Del_19p13.3	0.984	1
EMG1	11p-Del	0.984	1
EPHA4	KCND2	0.984	1
EPHA6	LGR6	0.984	1
GUCY2F	OR6C74	0.984	1
GUCY2F	RQCD1	0.984	1
HRAS	USP17L2	0.984	1
IDH1	MPP7	0.984	1
IDH1	Del_4p16.3	0.984	1
IGF1R	SYK	0.984	1
KEL	NGF	0.984	1
KIT	Amp_1q21.3	0.984	1
KRTAP5-10	MPP7	0.984	1
MPP7	NUP214	0.984	1
MSTN	OR4S2	0.984	1
MSTN	USP9X	0.984	1
NAP1L2	PTPN22	0.984	1
NAP1L2	RPTN	0.984	1
NF1	SELP	0.984	1
NRAS	THSD7B	0.984	1
NRAS	Del_12q23.3	0.984	1
OR4S2	ZNF780B	0.984	1
PTEN	13q-Amp	0.984	1
PTEN	Del_5p15.31	0.984	1
RELN	TP63	0.984	1
RPTN	17p-Del	0.984	1
SLC27A5	TP63	0.984	1
SLC27A5	USP9X	0.984	1
SYK	Del_19p13.3	0.984	1
THSD7B	USP9X	0.984	1
USP9X	ZNF780B	0.984	1
13q-Amp	Amp_1q44	0.984	1
20p-Amp	Amp_7p22.1	0.984	1
7q-Amp	6q-Del	0.984	1
10q-Del	Amp_1q44	0.984	1
Amp_1p12	Del_1p22.1	0.984	1
Amp_1p12	Del_4p16.3	0.984	1
Amp_5p15.33	Del_14q23.3	0.984	1
Amp_7p22.1	Del_2q37.3	0.984	1
Amp_12q15	Amp_17q25.3	0.984	1
Amp_12q15	Del_4p16.3	0.984	1
Amp_20q13.33	Del_4q34.3	0.984	1
Del_4p16.3	Del_15q13.3	0.984	1
ALPK2	NRAS	0.985	1
APC	EZH2	0.985	1
APC	KIT	0.985	1
APC	MPP7	0.985	1
APC	RIPK4	0.985	1
ATP5F1	FRMPD4	0.985	1
ATP5F1	KRTAP5-10	0.985	1
C10orf54	17p-Del	0.985	1
C7orf58	IGF1R	0.985	1
CCK	MSTN	0.985	1
CCK	Del_5q31.3	0.985	1
CCNA1	STK19	0.985	1
CDC42BPA	STK19	0.985	1
CDC42BPA	TRERF1	0.985	1
CNTN5	Amp_17q25.3	0.985	1
EPHA4	OXA1L	0.985	1
FAM58A	MYO3B	0.985	1
GNAQ	ZNF780B	0.985	1
HSD11B1	KIT	0.985	1
KIT	PTPN22	0.985	1
KIT	Amp_5p15.33	0.985	1
KRAS	MSTN	0.985	1
KRAS	SLC27A5	0.985	1
KRT73	STK19	0.985	1
KYNU	PARM1	0.985	1
MLL	OXA1L	0.985	1
MLL	RIPK4	0.985	1
MLL	TRERF1	0.985	1
MPP7	6q-Del	0.985	1
OXA1L	TPTE	0.985	1
OXA1L	7p-Amp	0.985	1
PDGFRA	RIPK4	0.985	1
PDGFRA	11p-Del	0.985	1
PTPN11	TPTE	0.985	1
PTPN22	RIPK4	0.985	1
PTPN22	Amp_5p15.33	0.985	1
STK19	16q-Del	0.985	1
SYK	Del_5q12.1	0.985	1
USH2A	USP9X	0.985	1
13q-Amp	16q-Del	0.985	1
22q-Amp	8q-Amp	0.985	1
6p-Amp	Del_15q21.1	0.985	1
6p-Amp	Del_16q23.1	0.985	1
7q-Amp	Del_6q26	0.985	1
17p-Del	Del_5p15.31	0.985	1
18p-Del	Del_19p13.3	0.985	1
6q-Del	Del_4p16.3	0.985	1
Amp_1q21.3	Amp_22q13.2	0.985	1
Amp_5p15.33	Amp_11q13.3	0.985	1
Amp_6p24.3	Del_8p23.3	0.985	1
Amp_7p22.1	Amp_8q24.21	0.985	1
Amp_7p22.1	Amp_12q14.1	0.985	1
Del_1p22.1	Del_6q26	0.985	1
Del_2q37.3	Del_6q21	0.985	1
Del_4p16.3	Del_5p15.31	0.985	1
Del_4p16.3	Del_6q26	0.985	1
Del_6q21	Del_8p23.3	0.985	1
Del_15q21.1	Del_16q24.3	0.985	1
ACSBG1	CNTN5	0.986	1
ACSBG1	KEL	0.986	1
ACSBG1	TTN	0.986	1
ALPK2	USP17L2	0.986	1
ALPK2	17p-Del	0.986	1
APCS	KEL	0.986	1
APCS	TTN	0.986	1
BTK	LGR6	0.986	1
BTK	RAC1	0.986	1
CDKN2A	CTNNA3	0.986	1
CNTN5	CTNNB1	0.986	1
CNTN5	GUCY2F	0.986	1
CNTN5	MAP2K1	0.986	1
CNTN5	PARM1	0.986	1
CNTN5	USP17L2	0.986	1
CNTN5	13q-Amp	0.986	1
CPA3	MAN1A1	0.986	1
CTNNB1	FRMPD4	0.986	1
CTNNB1	MYO3B	0.986	1
CYP3A4	IDH1	0.986	1
CYP3A4	MPP7	0.986	1
CYP3A4	Del_4p16.3	0.986	1
DDX3X	MPP7	0.986	1
DDX3X	ZFX	0.986	1
EPHA4	HRAS	0.986	1
EPHA4	USP17L2	0.986	1
FGFR2	OR4S2	0.986	1
FGFR2	USP9X	0.986	1
FRMPD4	8q-Amp	0.986	1
FRMPD4	Del_6q21	0.986	1
GML	NUP214	0.986	1
HSD11B1	Amp_22q13.2	0.986	1
IDH1	Del_Xp21.1	0.986	1
IGF1R	KEL	0.986	1
IGF1R	TTN	0.986	1
KCND2	KRTAP5-10	0.986	1
KCND2	MSTN	0.986	1
KCND2	SELP	0.986	1
KCND2	ZFX	0.986	1
KEL	MLL	0.986	1
LGR6	MAN1A1	0.986	1
LGR6	NUP214	0.986	1
LGR6	ZFX	0.986	1
MPP7	Amp_17q25.3	0.986	1
MYO16	NRAS	0.986	1
OR4S2	POTEG	0.986	1
PARM1	SLC9A11	0.986	1
PTPN11	THSD7B	0.986	1
RAC1	Del_4p16.3	0.986	1
RELN	STK19	0.986	1
RELN	USP9X	0.986	1
RQCD1	Del_10q23.31	0.986	1
S100A8	THSD7B	0.986	1
1q-Amp	Del_10p15.3	0.986	1
6p-Amp	Del_10q26.3	0.986	1
11q-Del	Del_1p36.31	0.986	1
11q-Del	Del_4q34.3	0.986	1
Amp_1q44	Amp_15q26.2	0.986	1
Amp_4q12	Amp_7p22.1	0.986	1
Amp_6q12	Amp_12q15	0.986	1
Amp_20q13.33	Del_Xp21.1	0.986	1
Del_4q34.3	Del_6q26	0.986	1
ANO4	HSD11B1	0.987	1
ATP5F1	THSD7B	0.987	1
C10orf54	DDX3X	0.987	1
CAMTA1	CCNA1	0.987	1
CAMTA1	CDC42BPA	0.987	1
CAMTA1	KRT73	0.987	1
CCK	Del_13q34	0.987	1
CDC42BPA	NAP1L2	0.987	1
CDC42BPA	PTEN	0.987	1
CDK4	EMG1	0.987	1
CNTN5	NAP1L2	0.987	1
CTNNA3	ZNF780B	0.987	1
DMC1	FGFR2	0.987	1
DMC1	20p-Amp	0.987	1
DSG3	MSTN	0.987	1
EPHA4	HSD11B1	0.987	1
EPHA4	STK19	0.987	1
FAM58A	THSD7B	0.987	1
FAM58A	USH2A	0.987	1
GUCY2F	MYO16	0.987	1
HRAS	LGR6	0.987	1
HRAS	Amp_6q12	0.987	1
IDH1	NRAS	0.987	1
IDH1	Del_16q23.1	0.987	1
KIT	Del_15q13.3	0.987	1
KRTAP5-10	KYNU	0.987	1
KYNU	MSTN	0.987	1
KYNU	ZNF780B	0.987	1
MAP2K1	SLC27A5	0.987	1
MYO3B	Del_16q12.1	0.987	1
NBPF1	Amp_3p13	0.987	1
OXA1L	RAC1	0.987	1
OXA1L	RELN	0.987	1
OXA1L	USH2A	0.987	1
PARM1	SLC38A4	0.987	1
POTEG	RELN	0.987	1
PTPN11	RAC1	0.987	1
PTPN11	USH2A	0.987	1
RB1	16q-Del	0.987	1
RB1	Del_16p13.3	0.987	1
RELN	S100A8	0.987	1
RQCD1	Del_10q26.3	0.987	1
SELP	STK19	0.987	1
SLC38A4	STK19	0.987	1
SYK	8q-Amp	0.987	1
TP63	Del_16q12.1	0.987	1
20q-Amp	7p-Amp	0.987	1
20q-Amp	Del_6q26	0.987	1
7p-Amp	9p-Del	0.987	1
7p-Amp	Del_10q21.1	0.987	1
8p-Amp	Del_15q13.3	0.987	1
10p-Del	Del_13q34	0.987	1
10p-Del	Del_15q13.3	0.987	1
11q-Del	Amp_1q44	0.987	1
11q-Del	Amp_11q13.3	0.987	1
17p-Del	Amp_15q26.2	0.987	1
5q-Del	Amp_22q13.2	0.987	1
Amp_1p12	Amp_11q13.3	0.987	1
Amp_1q44	Del_8p23.3	0.987	1
Del_1p22.1	Del_15q21.1	0.987	1
Del_5p15.31	Del_15q13.3	0.987	1
Del_11q23.3	Del_14q23.3	0.987	1
ACSBG1	CCNA1	0.988	1
ACSBG1	CDC42BPA	0.988	1
ACSBG1	KRT73	0.988	1
ALPK2	MSTN	0.988	1
ANO4	USP17L2	0.988	1
APCS	KIT	0.988	1
ARID2	POTEG	0.988	1
ATP5F1	OR6C74	0.988	1
C7orf58	DCLK3	0.988	1
CAMTA1	MLL	0.988	1
CAMTA1	MPP7	0.988	1
CBL	KRAS	0.988	1
CCK	FGFR2	0.988	1
CDC42BPA	THSD7B	0.988	1
CDK4	Del_8p23.3	0.988	1
CPA3	XIRP2	0.988	1
CTNNA3	MLL	0.988	1
CTNNA3	NUP214	0.988	1
CYP3A5	GLI1	0.988	1
DDX3X	KCND2	0.988	1
DDX3X	TTN	0.988	1
DMC1	HSD11B1	0.988	1
DSG3	EPHA4	0.988	1
DSG3	TP53	0.988	1
EPHA6	NGF	0.988	1
EPHA6	TP53	0.988	1
EPHA7	NGF	0.988	1
FAM58A	FGFR2	0.988	1
GNAQ	POTEG	0.988	1
GNAQ	RQCD1	0.988	1
HSD11B1	MPP7	0.988	1
IGF1R	KIT	0.988	1
IGF1R	RIPK4	0.988	1
KCND2	RAC1	0.988	1
KIT	NF1	0.988	1
KIT	SYK	0.988	1
KIT	Del_15q21.1	0.988	1
KRAS	20p-Amp	0.988	1
KRT73	SYK	0.988	1
MPP7	NAP1L2	0.988	1
MSTN	Amp_20q13.33	0.988	1
MYO16	NGF	0.988	1
NF1	PTPN11	0.988	1
NGF	SELP	0.988	1
NGF	SLC38A4	0.988	1
NRAS	Del_11q23.3	0.988	1
OR4S2	USP9X	0.988	1
PDGFRA	THSD7B	0.988	1
RAC1	XIRP2	0.988	1
RQCD1	Amp_1q21.3	0.988	1
20q-Amp	22q-Amp	0.988	1
22q-Amp	Amp_1q21.3	0.988	1
6p-Amp	Del_6q21	0.988	1
7q-Amp	Amp_6p24.3	0.988	1
7q-Amp	Del_6q21	0.988	1
7q-Amp	Del_10q26.3	0.988	1
11p-Del	6p-Del	0.988	1
11q-Del	Amp_20q13.33	0.988	1
17p-Del	9q-Del	0.988	1
6p-Del	Amp_11q13.3	0.988	1
9p-Del	Amp_1q44	0.988	1
9p-Del	Del_2q37.3	0.988	1
9p-Del	Del_8p23.3	0.988	1
Amp_1p12	Del_10q26.3	0.988	1
Amp_3p13	Amp_4q12	0.988	1
Amp_3p13	Amp_5p15.33	0.988	1
Amp_3p13	Amp_12q15	0.988	1
Amp_3p13	Amp_20q13.33	0.988	1
Amp_3p13	Amp_22q13.2	0.988	1
Amp_8q24.21	Del_10p15.3	0.988	1
Amp_15q26.2	Del_16p13.3	0.988	1
Del_4p16.3	Del_11q23.3	0.988	1
Del_4q34.3	Del_15q13.3	0.988	1
Del_5q12.1	Del_16q24.3	0.988	1
ANO4	PTPN22	0.989	1
APC	FAM58A	0.989	1
APCS	USP17L2	0.989	1
APCS	Del_Xp21.1	0.989	1
ARID2	EZH2	0.989	1
ARID2	GLI1	0.989	1
ATP5F1	EPHA6	0.989	1
ATP5F1	PDGFRA	0.989	1
ATP5F1	TRERF1	0.989	1
BTK	KRTAP5-10	0.989	1
C10orf54	PARM1	0.989	1
C10orf54	Del_5q12.1	0.989	1
C15orf23	EPHA6	0.989	1
C15orf23	MAN1A1	0.989	1
C15orf23	NUP214	0.989	1
C15orf23	PTPN11	0.989	1
C15orf23	S100A8	0.989	1
C7orf58	CDC42BPA	0.989	1
C7orf58	GLI1	0.989	1
C7orf58	OXA1L	0.989	1
CCK	PTPN22	0.989	1
CCNA1	USH2A	0.989	1
CDK4	Del_5q12.1	0.989	1
CDKN2A	MYO3B	0.989	1
CDKN2A	TP63	0.989	1
COL3A1	STK19	0.989	1
CPA3	HSD11B1	0.989	1
CPA3	10p-Del	0.989	1
CPA3	Del_11q23.3	0.989	1
CTNNA3	EPHA7	0.989	1
CTNNB1	TPTE	0.989	1
CYP3A4	STK19	0.989	1
DMC1	TRERF1	0.989	1
EPHA4	NF1	0.989	1
FAM58A	TRERF1	0.989	1
FLT1	USP9X	0.989	1
FRMPD4	XIRP2	0.989	1
GLI1	USH2A	0.989	1
GLI1	Del_19p13.3	0.989	1
GNAQ	8p-Amp	0.989	1
GUCY2F	NUP214	0.989	1
HSD11B1	LGR6	0.989	1
HSD11B1	RAC1	0.989	1
HSD11B1	THSD7B	0.989	1
IDH1	PARM1	0.989	1
IDH1	SLC27A5	0.989	1
IGF1R	USP17L2	0.989	1
KEL	MYO16	0.989	1
KRTAP5-10	MAN1A1	0.989	1
KRTAP5-10	MYO3B	0.989	1
KRTAP5-10	NUP214	0.989	1
KRTAP5-10	ZFX	0.989	1
LGR6	TP63	0.989	1
MAN1A1	SLC27A5	0.989	1
NF1	TP53	0.989	1
NRAS	20p-Amp	0.989	1
NUP214	SLC27A5	0.989	1
OR4S2	TRERF1	0.989	1
OR6C74	USP9X	0.989	1
OXA1L	PARM1	0.989	1
OXA1L	13q-Amp	0.989	1
PARM1	S100A8	0.989	1
PARM1	Amp_4q12	0.989	1
PPP6C	STK19	0.989	1
PPP6C	TP63	0.989	1
PTPN22	USH2A	0.989	1
PTPN22	USP9X	0.989	1
RAC1	STK19	0.989	1
RAC1	TP63	0.989	1
RB1	USP9X	0.989	1
RELN	TPTE	0.989	1
RIPK4	USH2A	0.989	1
SYK	Del_Xp21.1	0.989	1
TPTE	Del_4q34.3	0.989	1
TRERF1	TTN	0.989	1
1q-Amp	Del_6q21	0.989	1
6p-Amp	Del_2q37.3	0.989	1
6p-Amp	Del_6q26	0.989	1
7p-Amp	Del_4q34.3	0.989	1
8p-Amp	Amp_7p22.1	0.989	1
11q-Del	Amp_1q21.3	0.989	1
14q-Del	Del_4p16.3	0.989	1
17p-Del	5q-Del	0.989	1
5q-Del	Del_6q21	0.989	1
5q-Del	Del_12q23.3	0.989	1
Amp_1p12	Amp_20q13.33	0.989	1
Del_2q37.3	Del_9p23	0.989	1
Del_2q37.3	Del_11q23.3	0.989	1
Del_5p15.31	Del_10q21.1	0.989	1
Del_16q23.1	Del_Xp21.1	0.989	1
ACSBG1	TP53	0.99	1
ALPK2	OR4S2	0.99	1
BTK	FRMPD4	0.99	1
BTK	MYO3B	0.99	1
C10orf28	EMG1	0.99	1
C10orf28	RPTN	0.99	1
C10orf54	COL3A1	0.99	1
C10orf54	KEL	0.99	1
CAMTA1	CCK	0.99	1
CAMTA1	Amp_1p12	0.99	1
CBL	Amp_17q25.3	0.99	1
CCNA1	CDC42BPA	0.99	1
CCNA1	EZH2	0.99	1
CDC42BPA	GLI1	0.99	1
CDC42BPA	KIT	0.99	1
CDC42BPA	KRT73	0.99	1
COL3A1	OR4S2	0.99	1
COL3A1	OXA1L	0.99	1
COL3A1	USP9X	0.99	1
CPA3	CTNNA3	0.99	1
CYP3A5	TP53	0.99	1
DCLK3	KYNU	0.99	1
DCLK3	MAP2K1	0.99	1
DMC1	MLL	0.99	1
DSG3	IGF1R	0.99	1
DSG3	SYK	0.99	1
EPHA4	IGF1R	0.99	1
EPHA4	SYK	0.99	1
FAM58A	NAP1L2	0.99	1
FGFR2	FRMPD4	0.99	1
FLT1	OXA1L	0.99	1
FLT1	POTEG	0.99	1
FLT1	S100A8	0.99	1
FRMPD4	MAN1A1	0.99	1
FRMPD4	NUP214	0.99	1
FRMPD4	POTEG	0.99	1
FRMPD4	TP53	0.99	1
GLI1	KIT	0.99	1
GLI1	KRT73	0.99	1
HRAS	TPTE	0.99	1
KEL	PTPN11	0.99	1
KYNU	POTEG	0.99	1
KYNU	USP9X	0.99	1
MAP2K1	OR6C74	0.99	1
MPP7	OR6C74	0.99	1
MPP7	TPTE	0.99	1
MYO16	RELN	0.99	1
NGF	Del_4p16.3	0.99	1
OR6C74	Amp_15q26.2	0.99	1
PTPN11	Del_1p36.31	0.99	1
RAC1	1q-Amp	0.99	1
SLC9A11	USH2A	0.99	1
SYK	TPTE	0.99	1
SYK	7p-Amp	0.99	1
SYK	11p-Del	0.99	1
TP53	Del_5q31.3	0.99	1
13q-Amp	Amp_1q21.3	0.99	1
20p-Amp	Amp_13q31.3	0.99	1
22q-Amp	Amp_20q13.33	0.99	1
6p-Amp	Del_4q34.3	0.99	1
6p-Amp	Del_11q23.3	0.99	1
7q-Amp	Amp_1q44	0.99	1
7q-Amp	Amp_20q13.33	0.99	1
11p-Del	Del_10q26.3	0.99	1
18p-Del	Del_1p36.31	0.99	1
6p-Del	Del_10q21.1	0.99	1
Amp_6p24.3	Del_10p15.3	0.99	1
Amp_6q12	Del_6q21	0.99	1
Amp_7q34	Del_4q34.3	0.99	1
Amp_8q24.21	Del_6q21	0.99	1
Amp_13q31.3	Del_6q21	0.99	1
Amp_15q26.2	Del_2q37.3	0.99	1
Amp_15q26.2	Del_15q21.1	0.99	1
Del_1p22.1	Del_5q31.3	0.99	1
Del_3q13.31	Del_16p13.3	0.99	1
Del_4p16.3	Del_5q31.3	0.99	1
Del_4q34.3	Del_5q31.3	0.99	1
Del_4q34.3	Del_10q21.1	0.99	1
Del_5q12.1	Del_16q23.1	0.99	1
Del_10p15.3	Del_16q12.1	0.99	1
Del_11q23.3	Del_15q13.3	0.99	1
Del_13q34	Del_16q12.1	0.99	1
ACSBG1	ALPK2	0.991	1
ACSBG1	DMC1	0.991	1
ACSBG1	EPHA7	0.991	1
ACSBG1	MYO16	0.991	1
ACSBG1	SLC38A4	0.991	1
ALPK2	FRMPD4	0.991	1
ALPK2	SYK	0.991	1
ANO4	OR4S2	0.991	1
APC	C7orf58	0.991	1
APC	EPHA6	0.991	1
APC	KYNU	0.991	1
APCS	SLC38A4	0.991	1
ATP5F1	OXA1L	0.991	1
ATP5F1	PTPN11	0.991	1
ATP5F1	TP63	0.991	1
C7orf58	KYNU	0.991	1
C7orf58	PDGFRA	0.991	1
C7orf58	PTPN22	0.991	1
CCNA1	KEL	0.991	1
CDC42BPA	KEL	0.991	1
CDK4	5q-Del	0.991	1
CDKN2A	EMG1	0.991	1
CDKN2A	EPHA7	0.991	1
CNTN5	IDH1	0.991	1
COL3A1	CYP3A4	0.991	1
COL3A1	FGFR2	0.991	1
DCLK3	KRTAP5-10	0.991	1
DSG3	SLC38A4	0.991	1
EPHA4	LGR6	0.991	1
EPHA6	NUP214	0.991	1
FAM58A	OXA1L	0.991	1
FGFR2	KRTAP5-10	0.991	1
FGFR2	ZNF780B	0.991	1
FLT1	KIT	0.991	1
FRMPD4	SLC38A4	0.991	1
FRMPD4	Del_11q23.3	0.991	1
GNAQ	TP63	0.991	1
GNAQ	8q-Amp	0.991	1
GUCY2F	KCND2	0.991	1
GUCY2F	USP17L2	0.991	1
HRAS	RELN	0.991	1
HRAS	USP9X	0.991	1
HSD11B1	KRTAP5-10	0.991	1
HSD11B1	SLC27A5	0.991	1
IGF1R	MYO16	0.991	1
KEL	KRT73	0.991	1
KEL	RIPK4	0.991	1
KRAS	OXA1L	0.991	1
KRTAP5-10	TPTE	0.991	1
KYNU	PTPN22	0.991	1
KYNU	Del_5q12.1	0.991	1
MAP2K1	THSD7B	0.991	1
MLL	MYO3B	0.991	1
NRAS	SLC27A5	0.991	1
NUDT11	Del_16p13.3	0.991	1
OXA1L	Amp_12q14.1	0.991	1
PARM1	USP17L2	0.991	1
PTEN	Amp_8q24.21	0.991	1
RQCD1	TP63	0.991	1
RQCD1	8q-Amp	0.991	1
RQCD1	10q-Del	0.991	1
SELP	9q-Del	0.991	1
SLC38A4	SYK	0.991	1
SLC38A4	TP53	0.991	1
STK19	ZNF780B	0.991	1
TPTE	ZNF780B	0.991	1
22q-Amp	7p-Amp	0.991	1
7q-Amp	10p-Del	0.991	1
7q-Amp	10q-Del	0.991	1
8p-Amp	10q-Del	0.991	1
8p-Amp	Del_10p15.3	0.991	1
10p-Del	Del_8p23.3	0.991	1
11q-Del	Del_15q21.1	0.991	1
17p-Del	Del_10q23.31	0.991	1
18p-Del	Del_16q23.1	0.991	1
6p-Del	Del_13q34	0.991	1
Amp_1q21.3	Amp_15q26.2	0.991	1
Amp_5p15.33	Amp_12q15	0.991	1
Amp_7p22.1	Del_8p23.3	0.991	1
Amp_7p22.1	Del_10q26.3	0.991	1
Amp_7q34	Amp_8q24.21	0.991	1
Amp_8q24.21	Amp_13q31.3	0.991	1
Amp_13q31.3	Del_11q23.3	0.991	1
Del_4q34.3	Del_11q23.3	0.991	1
Del_5q31.3	Del_13q34	0.991	1
ALPK2	CNTN5	0.992	1
ALPK2	MYO16	0.992	1
ANO4	DSG3	0.992	1
APC	USP17L2	0.992	1
APCS	CPA3	0.992	1
APCS	CYP3A4	0.992	1
APCS	DDX3X	0.992	1
APCS	XIRP2	0.992	1
ARID2	DSG3	0.992	1
BTK	FGFR2	0.992	1
C10orf28	CNTN5	0.992	1
C10orf28	DDX3X	0.992	1
C10orf28	17p-Del	0.992	1
C15orf23	CTNNA3	0.992	1
C15orf23	MLL	0.992	1
C15orf23	17p-Del	0.992	1
C7orf58	FLT1	0.992	1
C7orf58	KEL	0.992	1
CAMTA1	Del_8p23.3	0.992	1
CBL	MAN1A1	0.992	1
CBL	NUP214	0.992	1
CCK	DSG3	0.992	1
CCK	Amp_6p24.3	0.992	1
CCNA1	USP17L2	0.992	1
CDC42BPA	USP17L2	0.992	1
CNTN5	EZH2	0.992	1
CNTN5	POTEG	0.992	1
CPA3	MYO3B	0.992	1
CTNNA3	GUCY2F	0.992	1
CTNNA3	KCND2	0.992	1
CYP3A4	MYO3B	0.992	1
CYP3A4	NF1	0.992	1
CYP3A4	SYK	0.992	1
CYP3A5	DDX3X	0.992	1
DCLK3	MAN1A1	0.992	1
DDX3X	DSG3	0.992	1
DSG3	FAM58A	0.992	1
FGFR2	MAN1A1	0.992	1
FLT1	KYNU	0.992	1
FLT1	PTPN22	0.992	1
FLT1	RELN	0.992	1
FRMPD4	PPP6C	0.992	1
FRMPD4	PTPN22	0.992	1
FRMPD4	RAC1	0.992	1
FRMPD4	TRERF1	0.992	1
FRMPD4	8p-Amp	0.992	1
GLI1	TP63	0.992	1
GLI1	USP17L2	0.992	1
GML	NF1	0.992	1
GNAQ	Amp_6p24.3	0.992	1
HSD11B1	RPTN	0.992	1
IDH1	Amp_6p24.3	0.992	1
IGF1R	XIRP2	0.992	1
KEL	RELN	0.992	1
KRAS	Amp_6p24.3	0.992	1
KYNU	MAP2K1	0.992	1
KYNU	TP53	0.992	1
KYNU	USH2A	0.992	1
LGR6	MYO3B	0.992	1
LGR6	NF1	0.992	1
LGR6	TP53	0.992	1
MAN1A1	NBPF1	0.992	1
MAN1A1	XIRP2	0.992	1
MLL	SLC9A11	0.992	1
MLL	13q-Amp	0.992	1
NF1	RAC1	0.992	1
NRAS	TTN	0.992	1
NRAS	13q-Amp	0.992	1
NRAS	Del_9p23	0.992	1
POTEG	RPTN	0.992	1
PTPN22	USP17L2	0.992	1
RELN	Del_4q34.3	0.992	1
STK19	Del_16q12.1	0.992	1
SYK	Del_4p16.3	0.992	1
TP53	XIRP2	0.992	1
TPTE	9q-Del	0.992	1
TPTE	Del_16q12.1	0.992	1
TRERF1	USP17L2	0.992	1
ZFX	Amp_6p24.3	0.992	1
20q-Amp	10q-Del	0.992	1
20q-Amp	Amp_1p12	0.992	1
6p-Amp	Amp_7p22.1	0.992	1
7p-Amp	Amp_1q21.3	0.992	1
7q-Amp	Del_10p15.3	0.992	1
10p-Del	Del_2q37.3	0.992	1
10q-Del	17p-Del	0.992	1
11q-Del	16q-Del	0.992	1
11q-Del	Amp_8q24.21	0.992	1
14q-Del	Del_1p36.31	0.992	1
14q-Del	Del_4q34.3	0.992	1
16q-Del	Amp_13q31.3	0.992	1
18p-Del	Amp_1q21.3	0.992	1
18p-Del	Del_16q24.3	0.992	1
6p-Del	Del_10p15.3	0.992	1
Amp_1q44	Del_10p15.3	0.992	1
Amp_1q44	Del_13q34	0.992	1
Amp_4q12	Del_2q37.3	0.992	1
Amp_5p15.33	Del_15q13.3	0.992	1
Amp_17q25.3	Del_6q21	0.992	1
Del_1p36.31	Del_16q23.1	0.992	1
Del_2q37.3	Del_12q23.3	0.992	1
Del_2q37.3	Del_16q12.1	0.992	1
Del_4p16.3	Del_14q23.3	0.992	1
Del_4p16.3	Del_16p13.3	0.992	1
Del_5q31.3	Del_19p13.3	0.992	1
Del_9p23	Del_15q21.1	0.992	1
Del_9p21.3	Del_13q34	0.992	1
Del_9p21.3	Del_16q24.3	0.992	1
Del_10p15.3	Del_Xp21.1	0.992	1
Del_14q23.3	Del_16p13.3	0.992	1
ACSBG1	SLC9A11	0.993	1
ALPK2	ATP5F1	0.993	1
ALPK2	FAM58A	0.993	1
APC	MSTN	0.993	1
APCS	KRTAP5-10	0.993	1
ARID2	LGR6	0.993	1
ATP5F1	USP17L2	0.993	1
BRAF	Del_10q23.31	0.993	1
BTK	HRAS	0.993	1
C10orf28	CCK	0.993	1
C10orf28	GUCY2F	0.993	1
C10orf54	EPHA7	0.993	1
C10orf54	SLC38A4	0.993	1
C15orf23	TP63	0.993	1
C7orf58	CTNNA3	0.993	1
CCNA1	EPHA4	0.993	1
CDKN2A	ZNF780B	0.993	1
CPA3	DDX3X	0.993	1
CPA3	THSD7B	0.993	1
CTNNB1	OXA1L	0.993	1
CTNNB1	PTPN11	0.993	1
DSG3	MPP7	0.993	1
EMG1	Del_8p23.3	0.993	1
EPHA4	GLI1	0.993	1
FLT1	KCND2	0.993	1
FRMPD4	NGF	0.993	1
GML	KIT	0.993	1
GNAQ	USP17L2	0.993	1
IDH1	TTN	0.993	1
IGF1R	MSTN	0.993	1
IGF1R	ZNF780B	0.993	1
KRAS	Amp_13q31.3	0.993	1
KRAS	Amp_20q13.33	0.993	1
KRAS	Amp_22q13.2	0.993	1
KRTAP5-10	PTPN22	0.993	1
KRTAP5-10	SYK	0.993	1
KRTAP5-10	TRERF1	0.993	1
KYNU	5q-Del	0.993	1
LGR6	THSD7B	0.993	1
MAN1A1	TTN	0.993	1
MAN1A1	USP9X	0.993	1
MLL	MYO16	0.993	1
MLL	SLC38A4	0.993	1
MSTN	PDGFRA	0.993	1
MYO16	USP9X	0.993	1
MYO3B	NGF	0.993	1
MYO3B	STK19	0.993	1
NAP1L2	RELN	0.993	1
NRAS	11q-Del	0.993	1
NUP214	TTN	0.993	1
NUP214	USP9X	0.993	1
OR4S2	SLC9A11	0.993	1
OR4S2	XIRP2	0.993	1
OR4S2	ZFX	0.993	1
OXA1L	SELP	0.993	1
PARM1	SYK	0.993	1
PARM1	XIRP2	0.993	1
PTPN11	SELP	0.993	1
PTPN22	SLC27A5	0.993	1
PTPN22	ZNF780B	0.993	1
S100A8	SELP	0.993	1
SELP	USP9X	0.993	1
SYK	Amp_7q34	0.993	1
TTN	USP17L2	0.993	1
13q-Amp	Del_15q13.3	0.993	1
1q-Amp	8p-Amp	0.993	1
1q-Amp	10p-Del	0.993	1
1q-Amp	Amp_15q26.2	0.993	1
20p-Amp	Amp_8q24.21	0.993	1
20q-Amp	10p-Del	0.993	1
20q-Amp	Del_13q34	0.993	1
22q-Amp	Amp_1q44	0.993	1
22q-Amp	Amp_15q26.2	0.993	1
7p-Amp	Del_8p23.3	0.993	1
7q-Amp	Del_10q23.31	0.993	1
8p-Amp	Del_11q23.3	0.993	1
8q-Amp	Amp_1p12	0.993	1
10p-Del	17p-Del	0.993	1
10p-Del	Del_4p16.3	0.993	1
10p-Del	Del_16q23.1	0.993	1
10p-Del	Del_Xp21.1	0.993	1
10q-Del	6p-Del	0.993	1
18p-Del	6q-Del	0.993	1
18p-Del	Del_5q31.3	0.993	1
5q-Del	Del_4p16.3	0.993	1
6q-Del	Del_15q13.3	0.993	1
Amp_4q12	Del_15q21.1	0.993	1
Amp_5p15.33	Del_13q34	0.993	1
Amp_5p15.33	Del_15q21.1	0.993	1
Amp_6p24.3	Amp_20q13.33	0.993	1
Amp_7p22.1	Amp_20q13.33	0.993	1
Amp_8q24.21	Del_6q26	0.993	1
Amp_20q13.33	Del_13q34	0.993	1
Del_4q34.3	Del_6q21	0.993	1
Del_5p15.31	Del_11q23.3	0.993	1
Del_5p15.31	Del_16q23.1	0.993	1
Del_5q12.1	Del_Xp21.1	0.993	1
ACSBG1	COL3A1	0.994	1
ALPK2	CDKN2A	0.994	1
ALPK2	GLI1	0.994	1
ALPK2	KRT73	0.994	1
ANO4	RAC1	0.994	1
APC	CNTN5	0.994	1
APC	RPTN	0.994	1
APC	5q-Del	0.994	1
ARID2	MAN1A1	0.994	1
ARID2	NUP214	0.994	1
ATP5F1	EPHA4	0.994	1
ATP5F1	SLC9A11	0.994	1
BTK	C7orf58	0.994	1
BTK	CTNNB1	0.994	1
BTK	PDGFRA	0.994	1
C10orf28	C7orf58	0.994	1
C10orf54	KCND2	0.994	1
C10orf54	Amp_17q25.3	0.994	1
C7orf58	THSD7B	0.994	1
CAMTA1	KRTAP5-10	0.994	1
CAMTA1	MSTN	0.994	1
CAMTA1	MYO3B	0.994	1
CAMTA1	SLC27A5	0.994	1
CAMTA1	ZNF780B	0.994	1
CBL	STK19	0.994	1
CCNA1	PPP6C	0.994	1
CCNA1	SLC27A5	0.994	1
CCNA1	TP53	0.994	1
CCNA1	TPTE	0.994	1
CCNA1	ZNF780B	0.994	1
CDC42BPA	CYP3A4	0.994	1
CDC42BPA	DSG3	0.994	1
CDC42BPA	KRTAP5-10	0.994	1
CDC42BPA	TPTE	0.994	1
CNTN5	NGF	0.994	1
COL3A1	PARM1	0.994	1
COL3A1	SELP	0.994	1
COL3A1	TP53	0.994	1
COL3A1	ZNF780B	0.994	1
CPA3	FLT1	0.994	1
CPA3	GLI1	0.994	1
CPA3	KRT73	0.994	1
CPA3	RIPK4	0.994	1
CYP3A4	GUCY2F	0.994	1
CYP3A4	KEL	0.994	1
CYP3A4	KRT73	0.994	1
DCLK3	RAC1	0.994	1
DDX3X	GLI1	0.994	1
DDX3X	NBPF1	0.994	1
DDX3X	USH2A	0.994	1
DDX3X	13q-Amp	0.994	1
DSG3	KRT73	0.994	1
DSG3	7p-Amp	0.994	1
EPHA6	GML	0.994	1
EPHA6	HRAS	0.994	1
EZH2	TPTE	0.994	1
FGFR2	LGR6	0.994	1
FGFR2	THSD7B	0.994	1
FLT1	RAC1	0.994	1
FRMPD4	KCND2	0.994	1
GLI1	KRTAP5-10	0.994	1
GLI1	RAC1	0.994	1
GLI1	SLC38A4	0.994	1
GLI1	ZNF780B	0.994	1
GLI1	Amp_20q13.33	0.994	1
GML	KEL	0.994	1
GML	Amp_7p22.1	0.994	1
GUCY2F	LGR6	0.994	1
HRAS	HSD11B1	0.994	1
HSD11B1	17p-Del	0.994	1
IDH1	MAP2K1	0.994	1
IDH1	Del_16q24.3	0.994	1
KCND2	OXA1L	0.994	1
KCND2	S100A8	0.994	1
KIT	KRTAP5-10	0.994	1
KRAS	6p-Amp	0.994	1
KRT73	SELP	0.994	1
KRT73	TP53	0.994	1
KRT73	ZNF780B	0.994	1
KRTAP5-10	MLL	0.994	1
KRTAP5-10	NAP1L2	0.994	1
KRTAP5-10	RIPK4	0.994	1
KYNU	MAN1A1	0.994	1
KYNU	Amp_4q12	0.994	1
LGR6	NBPF1	0.994	1
LGR6	PARM1	0.994	1
LGR6	RIPK4	0.994	1
MAN1A1	PTPN22	0.994	1
MAN1A1	TPTE	0.994	1
MLL	MSTN	0.994	1
MLL	STK19	0.994	1
MLL	ZNF780B	0.994	1
MPP7	OXA1L	0.994	1
MPP7	S100A8	0.994	1
MYO16	POTEG	0.994	1
MYO16	SLC38A4	0.994	1
NRAS	Amp_1q21.3	0.994	1
NUDT11	Del_1p22.1	0.994	1
PARM1	PPP6C	0.994	1
PPP6C	RIPK4	0.994	1
TP63	USP17L2	0.994	1
TP63	Del_16q23.1	0.994	1
13q-Amp	Del_11q23.3	0.994	1
20q-Amp	Del_11q23.3	0.994	1
6p-Amp	Amp_1q21.3	0.994	1
10p-Del	Del_5q12.1	0.994	1
10q-Del	Amp_7p22.1	0.994	1
16q-Del	6p-Del	0.994	1
16q-Del	Amp_15q26.2	0.994	1
16q-Del	Del_5q31.3	0.994	1
6p-Del	Del_16q23.1	0.994	1
9q-Del	Del_1p22.1	0.994	1
Amp_1q44	Amp_13q31.3	0.994	1
Amp_5p15.33	Amp_12q14.1	0.994	1
Amp_6p24.3	Del_Xp21.1	0.994	1
Amp_7q34	Del_6q21	0.994	1
Amp_8q24.21	Amp_11q13.3	0.994	1
Amp_8q24.21	Del_14q23.3	0.994	1
Amp_20q13.33	Del_1p22.1	0.994	1
Del_1p36.31	Del_14q23.3	0.994	1
Del_1p36.31	Del_16q12.1	0.994	1
Del_3q13.31	Del_6q26	0.994	1
Del_3q13.31	Del_8p23.3	0.994	1
Del_4q34.3	Del_16q12.1	0.994	1
Del_5q31.3	Del_16q24.3	0.994	1
ACSBG1	USH2A	0.995	1
ALPK2	POTEG	0.995	1
ANO4	CCNA1	0.995	1
ANO4	CDC42BPA	0.995	1
ANO4	CDKN2A	0.995	1
ANO4	KRT73	0.995	1
ANO4	MPP7	0.995	1
ANO4	RIPK4	0.995	1
APC	CYP3A4	0.995	1
APC	FGFR2	0.995	1
APC	RAC1	0.995	1
APCS	HRAS	0.995	1
APCS	RPTN	0.995	1
APCS	USH2A	0.995	1
ARID2	FRMPD4	0.995	1
ATP5F1	CPA3	0.995	1
ATP5F1	LGR6	0.995	1
ATP5F1	PPP6C	0.995	1
ATP5F1	RPTN	0.995	1
BRAF	PTEN	0.995	1
BRAF	Amp_7p22.1	0.995	1
BTK	FLT1	0.995	1
BTK	KEL	0.995	1
BTK	OXA1L	0.995	1
C10orf28	OR4S2	0.995	1
C15orf23	GLI1	0.995	1
CAMTA1	EPHA4	0.995	1
CCK	RPTN	0.995	1
CCNA1	KCND2	0.995	1
CCNA1	MPP7	0.995	1
CCNA1	PARM1	0.995	1
CDC42BPA	HRAS	0.995	1
CDC42BPA	KCND2	0.995	1
CDC42BPA	MPP7	0.995	1
CDC42BPA	PARM1	0.995	1
CDKN2A	KCND2	0.995	1
CDKN2A	PDGFRA	0.995	1
COL3A1	MLL	0.995	1
CTNNA3	MYO3B	0.995	1
CTNNA3	RPTN	0.995	1
CTNNB1	EPHA7	0.995	1
CYP3A4	GNAQ	0.995	1
CYP3A4	SLC9A11	0.995	1
CYP3A4	TRERF1	0.995	1
CYP3A5	Del_5q31.3	0.995	1
DCLK3	HSD11B1	0.995	1
DCLK3	MPP7	0.995	1
DDX3X	PDGFRA	0.995	1
DSG3	MAN1A1	0.995	1
DSG3	NUP214	0.995	1
DSG3	ZFX	0.995	1
EMG1	OR4S2	0.995	1
EPHA4	EPHA7	0.995	1
EPHA4	NAP1L2	0.995	1
EPHA4	RPTN	0.995	1
EPHA6	FLT1	0.995	1
EPHA6	RELN	0.995	1
EZH2	GUCY2F	0.995	1
FGFR2	HSD11B1	0.995	1
FGFR2	PDGFRA	0.995	1
FGFR2	PTPN22	0.995	1
FGFR2	STK19	0.995	1
FLT1	MAN1A1	0.995	1
GLI1	PARM1	0.995	1
GML	THSD7B	0.995	1
GNAQ	RPTN	0.995	1
GUCY2F	RIPK4	0.995	1
HRAS	IGF1R	0.995	1
HRAS	KRT73	0.995	1
IGF1R	OR6C74	0.995	1
KCND2	OR4S2	0.995	1
KCND2	RELN	0.995	1
KCND2	RIPK4	0.995	1
KEL	MAN1A1	0.995	1
KEL	ZFX	0.995	1
KIT	PARM1	0.995	1
KRT73	MPP7	0.995	1
KRT73	PARM1	0.995	1
KYNU	MYO16	0.995	1
KYNU	SELP	0.995	1
KYNU	SLC9A11	0.995	1
KYNU	TTN	0.995	1
LGR6	TRERF1	0.995	1
MAN1A1	OXA1L	0.995	1
MAN1A1	RELN	0.995	1
MAN1A1	TP53	0.995	1
MLL	TTN	0.995	1
MPP7	NBPF1	0.995	1
MPP7	SLC38A4	0.995	1
MPP7	USP17L2	0.995	1
MYO16	NF1	0.995	1
MYO3B	SLC9A11	0.995	1
NAP1L2	NUP214	0.995	1
NBPF1	PDGFRA	0.995	1
NBPF1	STK19	0.995	1
NBPF1	TPTE	0.995	1
NBPF1	TRERF1	0.995	1
NF1	STK19	0.995	1
NGF	PDGFRA	0.995	1
NGF	SLC9A11	0.995	1
NGF	SYK	0.995	1
NGF	TPTE	0.995	1
NGF	USH2A	0.995	1
NGF	Del_2q37.3	0.995	1
NUP214	PTPN11	0.995	1
NUP214	ZFX	0.995	1
OR4S2	RPTN	0.995	1
OR6C74	SLC9A11	0.995	1
OR6C74	SYK	0.995	1
POTEG	TRERF1	0.995	1
PPP6C	TRERF1	0.995	1
PTEN	Del_10p15.3	0.995	1
PTPN11	TP63	0.995	1
RELN	RIPK4	0.995	1
RQCD1	Del_10q21.1	0.995	1
S100A8	ZFX	0.995	1
SLC9A11	TPTE	0.995	1
THSD7B	ZFX	0.995	1
TP53	5q-Del	0.995	1
USP17L2	USP9X	0.995	1
13q-Amp	Amp_20q13.33	0.995	1
20p-Amp	7p-Amp	0.995	1
20p-Amp	10q-Del	0.995	1
20p-Amp	Amp_22q13.2	0.995	1
20q-Amp	18p-Del	0.995	1
20q-Amp	Amp_13q31.3	0.995	1
6p-Amp	Amp_6q12	0.995	1
7p-Amp	Amp_6p24.3	0.995	1
8q-Amp	Amp_20q13.33	0.995	1
8q-Amp	Amp_22q13.2	0.995	1
10p-Del	Del_16q24.3	0.995	1
10q-Del	Del_2q37.3	0.995	1
11q-Del	17p-Del	0.995	1
11q-Del	9q-Del	0.995	1
14q-Del	16q-Del	0.995	1
14q-Del	Amp_7q34	0.995	1
16q-Del	Del_Xp21.1	0.995	1
17p-Del	Del_4p16.3	0.995	1
18p-Del	Amp_1q44	0.995	1
18p-Del	Amp_7p22.1	0.995	1
18p-Del	Del_1p22.1	0.995	1
5q-Del	6q-Del	0.995	1
5q-Del	Del_10p15.3	0.995	1
6p-Del	Del_16q12.1	0.995	1
9p-Del	Del_1p36.31	0.995	1
Amp_1p12	Amp_7p22.1	0.995	1
Amp_4q12	Amp_12q15	0.995	1
Amp_5p15.33	Amp_20q13.33	0.995	1
Amp_7p22.1	Del_15q13.3	0.995	1
Amp_12q15	Del_1p36.31	0.995	1
Del_1p36.31	Del_6q26	0.995	1
Del_2q37.3	Del_10q21.1	0.995	1
Del_4p16.3	Del_9p21.3	0.995	1
Del_5q12.1	Del_11q23.3	0.995	1
Del_6q26	Del_8p23.3	0.995	1
Del_9p21.3	Del_15q21.1	0.995	1
Del_14q23.3	Del_16q24.3	0.995	1
ACSBG1	POTEG	0.996	1
ACSBG1	USP9X	0.996	1
ALPK2	BTK	0.996	1
ALPK2	C10orf54	0.996	1
ALPK2	PTPN11	0.996	1
ALPK2	S100A8	0.996	1
ANO4	HRAS	0.996	1
ANO4	KCND2	0.996	1
ANO4	NBPF1	0.996	1
APC	PDGFRA	0.996	1
APC	STK19	0.996	1
APC	THSD7B	0.996	1
APCS	DCLK3	0.996	1
APCS	POTEG	0.996	1
ARID2	MYO16	0.996	1
ARID2	ZNF780B	0.996	1
ATP5F1	PARM1	0.996	1
BRAF	Del_10q26.3	0.996	1
BTK	COL3A1	0.996	1
BTK	USH2A	0.996	1
C10orf28	EPHA7	0.996	1
C10orf28	USH2A	0.996	1
C10orf54	DSG3	0.996	1
C15orf23	CNTN5	0.996	1
C15orf23	DCLK3	0.996	1
C15orf23	FAM58A	0.996	1
C15orf23	THSD7B	0.996	1
C7orf58	EPHA7	0.996	1
C7orf58	MSTN	0.996	1
C7orf58	RELN	0.996	1
CAMTA1	FGFR2	0.996	1
CAMTA1	HSD11B1	0.996	1
CAMTA1	NBPF1	0.996	1
CAMTA1	OR6C74	0.996	1
CAMTA1	POTEG	0.996	1
CCNA1	COL3A1	0.996	1
CDC42BPA	OR6C74	0.996	1
CDC42BPA	RB1	0.996	1
CDKN2A	RQCD1	0.996	1
CPA3	EPHA6	0.996	1
CPA3	NAP1L2	0.996	1
CTNNA3	TTN	0.996	1
CTNNA3	USP17L2	0.996	1
CTNNB1	MPP7	0.996	1
CYP3A4	DMC1	0.996	1
CYP3A4	TPTE	0.996	1
CYP3A4	16q-Del	0.996	1
DCLK3	PARM1	0.996	1
DCLK3	SYK	0.996	1
DSG3	PTPN22	0.996	1
DSG3	S100A8	0.996	1
DSG3	TRERF1	0.996	1
EPHA4	OR4S2	0.996	1
EPHA4	TP63	0.996	1
EPHA4	USP9X	0.996	1
EPHA7	PTPN22	0.996	1
FGFR2	SYK	0.996	1
FLT1	KRTAP5-10	0.996	1
FLT1	MSTN	0.996	1
FLT1	PARM1	0.996	1
FRMPD4	KEL	0.996	1
FRMPD4	USH2A	0.996	1
GLI1	NGF	0.996	1
GLI1	OR6C74	0.996	1
GML	MSTN	0.996	1
GML	SLC38A4	0.996	1
GNAQ	GUCY2F	0.996	1
GNAQ	Amp_5p15.33	0.996	1
HSD11B1	MAP2K1	0.996	1
HSD11B1	OXA1L	0.996	1
HSD11B1	PDGFRA	0.996	1
HSD11B1	PTPN22	0.996	1
HSD11B1	TP63	0.996	1
HSD11B1	TRERF1	0.996	1
IDH1	16q-Del	0.996	1
IGF1R	MLL	0.996	1
IGF1R	OR4S2	0.996	1
KCND2	MLL	0.996	1
KEL	KRTAP5-10	0.996	1
KRAS	13q-Amp	0.996	1
KRT73	OR6C74	0.996	1
KRT73	XIRP2	0.996	1
MLL	PDGFRA	0.996	1
MLL	SYK	0.996	1
MSTN	USP17L2	0.996	1
MYO16	SLC9A11	0.996	1
MYO16	TP63	0.996	1
MYO3B	TP63	0.996	1
NBPF1	PARM1	0.996	1
NBPF1	SYK	0.996	1
NRAS	PPP6C	0.996	1
NRAS	1q-Amp	0.996	1
NUDT11	Del_Xp21.1	0.996	1
OR4S2	TPTE	0.996	1
OR6C74	RIPK4	0.996	1
OXA1L	TP53	0.996	1
PARM1	TRERF1	0.996	1
PDGFRA	PTPN22	0.996	1
PDGFRA	SELP	0.996	1
PDGFRA	TP53	0.996	1
PDGFRA	TPTE	0.996	1
POTEG	SYK	0.996	1
POTEG	9p-Del	0.996	1
PPP6C	TPTE	0.996	1
PTEN	RQCD1	0.996	1
PTPN22	SELP	0.996	1
RELN	TP53	0.996	1
RIPK4	SLC9A11	0.996	1
RIPK4	XIRP2	0.996	1
STK19	TPTE	0.996	1
STK19	XIRP2	0.996	1
TP53	USP17L2	0.996	1
TP63	Del_16q24.3	0.996	1
TPTE	TRERF1	0.996	1
TTN	USP9X	0.996	1
20p-Amp	Amp_1p12	0.996	1
22q-Amp	7q-Amp	0.996	1
6p-Amp	Del_3q13.31	0.996	1
6p-Amp	Del_16q12.1	0.996	1
7p-Amp	Amp_1q44	0.996	1
7p-Amp	Del_9p23	0.996	1
7p-Amp	Del_10p15.3	0.996	1
7q-Amp	Del_9p23	0.996	1
8q-Amp	Amp_11q13.3	0.996	1
8q-Amp	Del_10q26.3	0.996	1
10p-Del	Del_1p36.31	0.996	1
11p-Del	Del_5p15.31	0.996	1
11q-Del	Amp_12q14.1	0.996	1
11q-Del	Del_12q23.3	0.996	1
11q-Del	Del_13q34	0.996	1
11q-Del	Del_16q23.1	0.996	1
14q-Del	Del_15q13.3	0.996	1
14q-Del	Del_16q24.3	0.996	1
16q-Del	Del_1p36.31	0.996	1
16q-Del	Del_11q23.3	0.996	1
16q-Del	Del_14q23.3	0.996	1
17p-Del	9p-Del	0.996	1
18p-Del	Del_11q23.3	0.996	1
6p-Del	9p-Del	0.996	1
Amp_1p12	Del_11q23.3	0.996	1
Amp_1q21.3	Del_6q21	0.996	1
Amp_1q44	Del_6q21	0.996	1
Amp_5p15.33	Del_5p15.31	0.996	1
Amp_6q12	Amp_12q14.1	0.996	1
Amp_7p22.1	Del_11q23.3	0.996	1
Amp_11q13.3	Del_19p13.3	0.996	1
Amp_17q25.3	Del_11q23.3	0.996	1
Del_1p36.31	Del_10q21.1	0.996	1
Del_1p22.1	Del_15q13.3	0.996	1
Del_2q37.3	Del_10q23.31	0.996	1
Del_4p16.3	Del_10p15.3	0.996	1
Del_4p16.3	Del_10q26.3	0.996	1
Del_5q12.1	Del_6q21	0.996	1
Del_5q12.1	Del_10p15.3	0.996	1
Del_8p23.3	Del_10q23.31	0.996	1
Del_8p23.3	Del_15q21.1	0.996	1
Del_10p15.3	Del_16q24.3	0.996	1
Del_10q21.1	Del_15q13.3	0.996	1
ACSBG1	NUP214	0.997	1
ACSBG1	PDGFRA	0.997	1
ALPK2	CTNNA3	0.997	1
ALPK2	STK19	0.997	1
ANO4	APC	0.997	1
ANO4	OXA1L	0.997	1
ANO4	PDGFRA	0.997	1
ANO4	PTPN11	0.997	1
ANO4	TPTE	0.997	1
ANO4	TRERF1	0.997	1
APC	C10orf54	0.997	1
APC	CAMTA1	0.997	1
APC	NAP1L2	0.997	1
APC	NF1	0.997	1
APCS	ARID2	0.997	1
APCS	EPHA6	0.997	1
APCS	NAP1L2	0.997	1
ATP5F1	CNTN5	0.997	1
ATP5F1	OR4S2	0.997	1
BRAF	Del_10q21.1	0.997	1
BTK	STK19	0.997	1
C10orf28	HSD11B1	0.997	1
C10orf54	CDC42BPA	0.997	1
C10orf54	SLC9A11	0.997	1
C7orf58	MPP7	0.997	1
C7orf58	SYK	0.997	1
CBL	GML	0.997	1
CCK	FLT1	0.997	1
CCK	KYNU	0.997	1
CCK	MAP2K1	0.997	1
CCNA1	CDKN2A	0.997	1
CCNA1	RPTN	0.997	1
CDC42BPA	FRMPD4	0.997	1
CDC42BPA	OR4S2	0.997	1
CDC42BPA	OXA1L	0.997	1
CDC42BPA	RPTN	0.997	1
CNTN5	KCND2	0.997	1
CNTN5	SYK	0.997	1
COL3A1	EPHA4	0.997	1
CPA3	MPP7	0.997	1
CPA3	SELP	0.997	1
CPA3	ZNF780B	0.997	1
CTNNA3	EPHA6	0.997	1
CTNNA3	THSD7B	0.997	1
CTNNB1	KCND2	0.997	1
CYP3A4	SLC38A4	0.997	1
CYP3A4	XIRP2	0.997	1
CYP3A5	PDGFRA	0.997	1
DCLK3	PTPN11	0.997	1
DDX3X	USP9X	0.997	1
DSG3	THSD7B	0.997	1
EMG1	NRAS	0.997	1
EPHA4	KYNU	0.997	1
EPHA4	MLL	0.997	1
EPHA4	SLC27A5	0.997	1
EPHA4	ZNF780B	0.997	1
EPHA6	KRTAP5-10	0.997	1
EPHA7	NUP214	0.997	1
EPHA7	RAC1	0.997	1
EZH2	USP9X	0.997	1
FGFR2	OXA1L	0.997	1
FGFR2	S100A8	0.997	1
FLT1	NF1	0.997	1
FLT1	SELP	0.997	1
FLT1	STK19	0.997	1
FLT1	TTN	0.997	1
FRMPD4	USP17L2	0.997	1
FRMPD4	USP9X	0.997	1
GLI1	MYO3B	0.997	1
GML	TPTE	0.997	1
GNAQ	KEL	0.997	1
GNAQ	OR4S2	0.997	1
GUCY2F	NAP1L2	0.997	1
GUCY2F	SLC9A11	0.997	1
GUCY2F	USH2A	0.997	1
HRAS	KRTAP5-10	0.997	1
HSD11B1	RELN	0.997	1
IGF1R	NUP214	0.997	1
IGF1R	PTPN22	0.997	1
KCND2	TRERF1	0.997	1
KRAS	Del_15q13.3	0.997	1
KRT73	PTPN11	0.997	1
KRTAP5-10	MSTN	0.997	1
KRTAP5-10	ZNF780B	0.997	1
LGR6	SLC38A4	0.997	1
MAN1A1	MPP7	0.997	1
MAN1A1	SLC9A11	0.997	1
MAN1A1	SYK	0.997	1
MLL	TP63	0.997	1
MPP7	PTPN22	0.997	1
MSTN	Amp_6q12	0.997	1
MYO3B	TPTE	0.997	1
NAP1L2	TRERF1	0.997	1
NBPF1	OXA1L	0.997	1
NBPF1	PTPN11	0.997	1
NF1	OR4S2	0.997	1
NF1	SYK	0.997	1
NGF	17p-Del	0.997	1
NRAS	Amp_13q31.3	0.997	1
NUDT11	SLC9A11	0.997	1
NUP214	SLC38A4	0.997	1
NUP214	USP17L2	0.997	1
OR4S2	RIPK4	0.997	1
OXA1L	PDGFRA	0.997	1
OXA1L	SLC9A11	0.997	1
PDGFRA	SYK	0.997	1
PDGFRA	USH2A	0.997	1
RAC1	RELN	0.997	1
RB1	1q-Amp	0.997	1
RELN	SLC9A11	0.997	1
RELN	TRERF1	0.997	1
RIPK4	RPTN	0.997	1
RPTN	TP53	0.997	1
S100A8	SLC9A11	0.997	1
SLC27A5	ZNF780B	0.997	1
SLC38A4	USH2A	0.997	1
SLC38A4	XIRP2	0.997	1
SLC9A11	ZFX	0.997	1
TP63	USP9X	0.997	1
1q-Amp	20p-Amp	0.997	1
1q-Amp	Amp_7p22.1	0.997	1
20p-Amp	Amp_1q21.3	0.997	1
20q-Amp	8q-Amp	0.997	1
20q-Amp	Amp_5p15.33	0.997	1
20q-Amp	Amp_8q24.21	0.997	1
7p-Amp	Del_10q26.3	0.997	1
8p-Amp	Del_10q21.1	0.997	1
10p-Del	5q-Del	0.997	1
10p-Del	Amp_1q44	0.997	1
10p-Del	Amp_7p22.1	0.997	1
10p-Del	Del_15q21.1	0.997	1
11p-Del	Del_8p23.3	0.997	1
11q-Del	18p-Del	0.997	1
11q-Del	6p-Del	0.997	1
11q-Del	Del_14q23.3	0.997	1
14q-Del	Amp_8q24.21	0.997	1
16q-Del	Del_9p23	0.997	1
16q-Del	Del_19p13.3	0.997	1
17p-Del	Del_9p23	0.997	1
6p-Del	Del_10q26.3	0.997	1
6q-Del	Del_16q12.1	0.997	1
9p-Del	Amp_7p22.1	0.997	1
9q-Del	Del_4q34.3	0.997	1
Amp_1q21.3	Amp_13q31.3	0.997	1
Amp_3p13	Amp_15q26.2	0.997	1
Amp_7p22.1	Del_10p15.3	0.997	1
Amp_7p22.1	Del_10q23.31	0.997	1
Amp_7q34	Del_8p23.3	0.997	1
Amp_8q24.21	Del_11q23.3	0.997	1
Amp_12q14.1	Del_5p15.31	0.997	1
Del_1p36.31	Del_15q21.1	0.997	1
Del_1p22.1	Del_16q23.1	0.997	1
Del_2q37.3	Del_16p13.3	0.997	1
Del_3q13.31	Del_10p15.3	0.997	1
Del_4q34.3	Del_9p23	0.997	1
Del_4q34.3	Del_16p13.3	0.997	1
Del_5q31.3	Del_16q23.1	0.997	1
Del_6q21	Del_19p13.3	0.997	1
Del_8p23.3	Del_10q26.3	0.997	1
Del_8p23.3	Del_14q23.3	0.997	1
Del_9p23	Del_16p13.3	0.997	1
Del_9p21.3	Del_16q12.1	0.997	1
Del_13q34	Del_16q23.1	0.997	1
Del_15q21.1	Del_16q12.1	0.997	1
Del_16q12.1	Del_19p13.3	0.997	1
ACSBG1	C10orf28	0.998	1
ACSBG1	DSG3	0.998	1
ACSBG1	FLT1	0.998	1
ACSBG1	TPTE	0.998	1
ALPK2	SLC38A4	0.998	1
ANO4	NAP1L2	0.998	1
ANO4	SELP	0.998	1
APC	KEL	0.998	1
APC	KRT73	0.998	1
APC	MYO3B	0.998	1
APC	TTN	0.998	1
APC	Del_Xp21.1	0.998	1
APCS	DSG3	0.998	1
ARID2	CCNA1	0.998	1
ARID2	COL3A1	0.998	1
ARID2	KCND2	0.998	1
ARID2	PTPN22	0.998	1
ATP5F1	COL3A1	0.998	1
ATP5F1	EPHA7	0.998	1
ATP5F1	TPTE	0.998	1
BTK	EPHA6	0.998	1
BTK	KCND2	0.998	1
BTK	MLL	0.998	1
C10orf28	MYO3B	0.998	1
C10orf28	TP53	0.998	1
C10orf28	TP63	0.998	1
C15orf23	EPHA7	0.998	1
C15orf23	KCND2	0.998	1
C15orf23	RPTN	0.998	1
C15orf23	XIRP2	0.998	1
C15orf23	ZNF780B	0.998	1
C7orf58	COL3A1	0.998	1
C7orf58	RPTN	0.998	1
C7orf58	TP53	0.998	1
C7orf58	TPTE	0.998	1
C7orf58	TTN	0.998	1
CAMTA1	EPHA6	0.998	1
CAMTA1	NF1	0.998	1
CBL	ZNF780B	0.998	1
CBL	Amp_6q12	0.998	1
CCK	5q-Del	0.998	1
CCNA1	THSD7B	0.998	1
CDC42BPA	DCLK3	0.998	1
CDC42BPA	FGFR2	0.998	1
CDC42BPA	NUP214	0.998	1
CDC42BPA	PDGFRA	0.998	1
CDC42BPA	PTPN22	0.998	1
CDKN2A	TP53	0.998	1
CNTN5	CTNNA3	0.998	1
CNTN5	FGFR2	0.998	1
CNTN5	KEL	0.998	1
CNTN5	MSTN	0.998	1
CNTN5	NUP214	0.998	1
CNTN5	PTPN22	0.998	1
CNTN5	TP63	0.998	1
COL3A1	GML	0.998	1
COL3A1	PDGFRA	0.998	1
COL3A1	PTPN22	0.998	1
CPA3	DSG3	0.998	1
CPA3	KYNU	0.998	1
CPA3	OR6C74	0.998	1
CPA3	USP17L2	0.998	1
CTNNA3	NAP1L2	0.998	1
CTNNA3	USH2A	0.998	1
CYP3A4	THSD7B	0.998	1
CYP3A4	USP17L2	0.998	1
CYP3A5	EMG1	0.998	1
DCLK3	KEL	0.998	1
DDX3X	MYO3B	0.998	1
DDX3X	TP53	0.998	1
DDX3X	Amp_13q31.3	0.998	1
DDX3X	Amp_15q26.2	0.998	1
DSG3	LGR6	0.998	1
DSG3	USP9X	0.998	1
EMG1	POTEG	0.998	1
EPHA4	FRMPD4	0.998	1
EPHA4	KEL	0.998	1
EPHA4	MYO3B	0.998	1
EPHA4	NUP214	0.998	1
EPHA4	TPTE	0.998	1
EPHA6	FRMPD4	0.998	1
EPHA6	GLI1	0.998	1
EPHA6	TRERF1	0.998	1
EPHA7	MSTN	0.998	1
FAM58A	Amp_17q25.3	0.998	1
FGFR2	KYNU	0.998	1
FGFR2	RPTN	0.998	1
FGFR2	USH2A	0.998	1
FGFR2	USP17L2	0.998	1
FLT1	MPP7	0.998	1
FLT1	PDGFRA	0.998	1
FLT1	TP53	0.998	1
FRMPD4	LGR6	0.998	1
FRMPD4	MLL	0.998	1
FRMPD4	PDGFRA	0.998	1
FRMPD4	Del_2q37.3	0.998	1
GLI1	MAN1A1	0.998	1
GLI1	PTPN22	0.998	1
GLI1	THSD7B	0.998	1
GML	RPTN	0.998	1
GNAQ	MAN1A1	0.998	1
GNAQ	NUP214	0.998	1
GUCY2F	SLC38A4	0.998	1
GUCY2F	TP63	0.998	1
GUCY2F	TTN	0.998	1
GUCY2F	XIRP2	0.998	1
HRAS	NF1	0.998	1
HSD11B1	SELP	0.998	1
KCND2	KEL	0.998	1
KCND2	MAN1A1	0.998	1
KCND2	NUP214	0.998	1
KCND2	PARM1	0.998	1
KEL	NBPF1	0.998	1
KEL	USP9X	0.998	1
KIT	NAP1L2	0.998	1
KRAS	Del_Xp21.1	0.998	1
KRT73	MAN1A1	0.998	1
KRT73	MLL	0.998	1
KRT73	NUP214	0.998	1
KRT73	TRERF1	0.998	1
KRT73	USH2A	0.998	1
KRTAP5-10	OR6C74	0.998	1
LGR6	USP17L2	0.998	1
MLL	PARM1	0.998	1
MLL	ZFX	0.998	1
MPP7	MSTN	0.998	1
MPP7	PARM1	0.998	1
MPP7	THSD7B	0.998	1
MPP7	ZNF780B	0.998	1
MSTN	OXA1L	0.998	1
MYO16	MYO3B	0.998	1
MYO16	PARM1	0.998	1
MYO16	STK19	0.998	1
MYO16	TTN	0.998	1
MYO3B	POTEG	0.998	1
MYO3B	PTPN22	0.998	1
MYO3B	RAC1	0.998	1
MYO3B	RELN	0.998	1
MYO3B	SLC38A4	0.998	1
MYO3B	TRERF1	0.998	1
NAP1L2	S100A8	0.998	1
NAP1L2	THSD7B	0.998	1
NBPF1	RPTN	0.998	1
NF1	RELN	0.998	1
NF1	RIPK4	0.998	1
NRAS	Del_5p15.31	0.998	1
NUP214	RIPK4	0.998	1
NUP214	RPTN	0.998	1
NUP214	XIRP2	0.998	1
OR6C74	PPP6C	0.998	1
OXA1L	THSD7B	0.998	1
PDGFRA	TTN	0.998	1
POTEG	USP17L2	0.998	1
PTPN11	RELN	0.998	1
PTPN11	RPTN	0.998	1
RB1	Amp_1q21.3	0.998	1
RB1	Amp_1q44	0.998	1
RELN	THSD7B	0.998	1
RIPK4	TRERF1	0.998	1
RQCD1	Amp_1q44	0.998	1
S100A8	TPTE	0.998	1
S100A8	USH2A	0.998	1
S100A8	XIRP2	0.998	1
SELP	SLC27A5	0.998	1
STK19	THSD7B	0.998	1
STK19	USP17L2	0.998	1
THSD7B	ZNF780B	0.998	1
TP53	ZNF780B	0.998	1
TP63	Del_11q23.3	0.998	1
1q-Amp	Del_11q23.3	0.998	1
20p-Amp	8q-Amp	0.998	1
20p-Amp	10p-Del	0.998	1
7p-Amp	10p-Del	0.998	1
7p-Amp	10q-Del	0.998	1
7p-Amp	Del_10q23.31	0.998	1
7q-Amp	18p-Del	0.998	1
8p-Amp	11q-Del	0.998	1
8p-Amp	Amp_1q21.3	0.998	1
8q-Amp	9p-Del	0.998	1
8q-Amp	Amp_15q26.2	0.998	1
8q-Amp	Del_11q23.3	0.998	1
8q-Amp	Del_15q13.3	0.998	1
10p-Del	Amp_8q24.21	0.998	1
10p-Del	Del_19p13.3	0.998	1
10q-Del	Del_5q12.1	0.998	1
11p-Del	Del_3q13.31	0.998	1
11p-Del	Del_4p16.3	0.998	1
11p-Del	Del_16q24.3	0.998	1
11q-Del	14q-Del	0.998	1
11q-Del	Del_5p15.31	0.998	1
11q-Del	Del_5q12.1	0.998	1
16q-Del	Del_13q34	0.998	1
16q-Del	Del_15q21.1	0.998	1
17p-Del	Amp_1p12	0.998	1
17p-Del	Del_10q21.1	0.998	1
17p-Del	Del_11q23.3	0.998	1
18p-Del	5q-Del	0.998	1
6p-Del	Del_12q23.3	0.998	1
6q-Del	Del_1p22.1	0.998	1
9p-Del	Del_4p16.3	0.998	1
9p-Del	Del_4q34.3	0.998	1
9p-Del	Del_13q34	0.998	1
9p-Del	Del_16p13.3	0.998	1
9q-Del	Del_4p16.3	0.998	1
9q-Del	Del_5p15.31	0.998	1
Amp_1q21.3	Del_11q23.3	0.998	1
Amp_1q44	Amp_8q24.21	0.998	1
Amp_1q44	Amp_20q13.33	0.998	1
Amp_7p22.1	Del_6q26	0.998	1
Amp_7q34	Del_9p21.3	0.998	1
Amp_8q24.21	Del_15q13.3	0.998	1
Amp_11q13.3	Del_13q34	0.998	1
Amp_15q26.2	Del_16q24.3	0.998	1
Del_1p22.1	Del_4q34.3	0.998	1
Del_1p22.1	Del_16q12.1	0.998	1
Del_2q37.3	Del_13q34	0.998	1
Del_3q13.31	Del_Xp21.1	0.998	1
Del_4p16.3	Del_9p23	0.998	1
Del_4q34.3	Del_14q23.3	0.998	1
Del_5q12.1	Del_10q23.31	0.998	1
Del_6q26	Del_16q12.1	0.998	1
Del_9p23	Del_13q34	0.998	1
Del_10p15.3	Del_15q21.1	0.998	1
Del_10p15.3	Del_16q23.1	0.998	1
Del_10q21.1	Del_11q23.3	0.998	1
Del_11q23.3	Del_16q12.1	0.998	1
Del_16p13.3	Del_19p13.3	0.998	1
ACSBG1	ANO4	0.999	1
ACSBG1	CPA3	0.999	1
ACSBG1	EPHA4	0.999	1
ACSBG1	GLI1	0.999	1
ACSBG1	IGF1R	0.999	1
ACSBG1	MYO3B	0.999	1
ACSBG1	RIPK4	0.999	1
ACSBG1	SELP	0.999	1
ALPK2	APC	0.999	1
ALPK2	C15orf23	0.999	1
ALPK2	CCNA1	0.999	1
ALPK2	NAP1L2	0.999	1
ALPK2	NBPF1	0.999	1
ALPK2	PARM1	0.999	1
ALPK2	RQCD1	0.999	1
ANO4	BTK	0.999	1
ANO4	CTNNA3	0.999	1
ANO4	GUCY2F	0.999	1
ANO4	KRTAP5-10	0.999	1
ANO4	MSTN	0.999	1
ANO4	POTEG	0.999	1
ANO4	RELN	0.999	1
ANO4	SLC27A5	0.999	1
ANO4	SYK	0.999	1
ANO4	ZNF780B	0.999	1
APC	ATP5F1	0.999	1
APC	DCLK3	0.999	1
APC	EPHA7	0.999	1
APC	MAN1A1	0.999	1
APC	NBPF1	0.999	1
APC	TP53	0.999	1
APC	XIRP2	0.999	1
APCS	GML	0.999	1
APCS	KCND2	0.999	1
APCS	MPP7	0.999	1
APCS	MYO3B	0.999	1
APCS	SELP	0.999	1
APCS	THSD7B	0.999	1
ARID2	PARM1	0.999	1
ARID2	RELN	0.999	1
ARID2	S100A8	0.999	1
ATP5F1	CAMTA1	0.999	1
ATP5F1	DCLK3	0.999	1
ATP5F1	MSTN	0.999	1
ATP5F1	POTEG	0.999	1
ATP5F1	TP53	0.999	1
ATP5F1	ZNF780B	0.999	1
BRAF	10q-Del	0.999	1
BTK	TPTE	0.999	1
BTK	ZNF780B	0.999	1
C10orf54	C15orf23	0.999	1
C10orf54	MPP7	0.999	1
C15orf23	CBL	0.999	1
C15orf23	NF1	0.999	1
C15orf23	STK19	0.999	1
C15orf23	TP53	0.999	1
C15orf23	USP17L2	0.999	1
C7orf58	FGFR2	0.999	1
C7orf58	MYO3B	0.999	1
C7orf58	NBPF1	0.999	1
C7orf58	SELP	0.999	1
C7orf58	TP63	0.999	1
C7orf58	XIRP2	0.999	1
CAMTA1	CPA3	0.999	1
CAMTA1	DSG3	0.999	1
CAMTA1	KYNU	0.999	1
CAMTA1	MAN1A1	0.999	1
CAMTA1	NUP214	0.999	1
CAMTA1	PDGFRA	0.999	1
CAMTA1	USP17L2	0.999	1
CBL	GUCY2F	0.999	1
CCNA1	GLI1	0.999	1
CCNA1	RIPK4	0.999	1
CCNA1	TP63	0.999	1
CDC42BPA	EPHA4	0.999	1
CDC42BPA	FAM58A	0.999	1
CDC42BPA	GNAQ	0.999	1
CDC42BPA	LGR6	0.999	1
CDC42BPA	RELN	0.999	1
CDC42BPA	RIPK4	0.999	1
CDC42BPA	SLC38A4	0.999	1
CDC42BPA	SYK	0.999	1
CDC42BPA	TP53	0.999	1
CDK4	Amp_1p12	0.999	1
CDKN2A	COL3A1	0.999	1
CDKN2A	FLT1	0.999	1
CNTN5	FLT1	0.999	1
CNTN5	KRT73	0.999	1
CNTN5	NBPF1	0.999	1
CNTN5	OR4S2	0.999	1
CNTN5	THSD7B	0.999	1
COL3A1	CTNNA3	0.999	1
COL3A1	DSG3	0.999	1
COL3A1	FRMPD4	0.999	1
COL3A1	GUCY2F	0.999	1
COL3A1	KCND2	0.999	1
COL3A1	MSTN	0.999	1
COL3A1	MYO3B	0.999	1
COL3A1	SLC27A5	0.999	1
CPA3	DCLK3	0.999	1
CPA3	EPHA7	0.999	1
CPA3	POTEG	0.999	1
CPA3	PTPN22	0.999	1
CPA3	RELN	0.999	1
CPA3	S100A8	0.999	1
CPA3	SLC9A11	0.999	1
CTNNA3	DCLK3	0.999	1
CTNNA3	DSG3	0.999	1
CTNNA3	FGFR2	0.999	1
CTNNA3	NBPF1	0.999	1
CTNNA3	OR4S2	0.999	1
CTNNA3	PARM1	0.999	1
CTNNA3	POTEG	0.999	1
CTNNA3	SYK	0.999	1
CTNNA3	TP53	0.999	1
CYP3A4	EPHA4	0.999	1
CYP3A4	EPHA7	0.999	1
CYP3A4	FGFR2	0.999	1
CYP3A4	FLT1	0.999	1
CYP3A4	LGR6	0.999	1
CYP3A4	NAP1L2	0.999	1
CYP3A4	PARM1	0.999	1
CYP3A4	TTN	0.999	1
CYP3A5	MYO16	0.999	1
DCLK3	DSG3	0.999	1
DCLK3	EPHA4	0.999	1
DCLK3	POTEG	0.999	1
DCLK3	RELN	0.999	1
DCLK3	ZFX	0.999	1
DDX3X	20p-Amp	0.999	1
DMC1	THSD7B	0.999	1
DMC1	22q-Amp	0.999	1
DSG3	FRMPD4	0.999	1
DSG3	KYNU	0.999	1
DSG3	MYO16	0.999	1
DSG3	NAP1L2	0.999	1
DSG3	PDGFRA	0.999	1
DSG3	RIPK4	0.999	1
DSG3	SELP	0.999	1
EMG1	PDGFRA	0.999	1
EPHA4	EPHA6	0.999	1
EPHA4	PARM1	0.999	1
EPHA4	POTEG	0.999	1
EPHA4	PTPN22	0.999	1
EPHA4	RELN	0.999	1
EPHA4	SELP	0.999	1
EPHA4	SLC38A4	0.999	1
EPHA4	SLC9A11	0.999	1
EPHA4	TP53	0.999	1
EPHA4	TTN	0.999	1
EPHA4	USH2A	0.999	1
EPHA4	XIRP2	0.999	1
EPHA6	FAM58A	0.999	1
EPHA6	FGFR2	0.999	1
EPHA6	MPP7	0.999	1
EPHA6	MYO16	0.999	1
EPHA6	OXA1L	0.999	1
EPHA6	TP63	0.999	1
EPHA7	FGFR2	0.999	1
EPHA7	GLI1	0.999	1
EPHA7	KCND2	0.999	1
EPHA7	KEL	0.999	1
EPHA7	KIT	0.999	1
EPHA7	KRT73	0.999	1
EPHA7	MYO16	0.999	1
EPHA7	NAP1L2	0.999	1
EPHA7	OR6C74	0.999	1
EPHA7	PTPN11	0.999	1
EPHA7	RELN	0.999	1
EPHA7	RIPK4	0.999	1
EPHA7	S100A8	0.999	1
EPHA7	SLC38A4	0.999	1
EPHA7	SLC9A11	0.999	1
EPHA7	USP17L2	0.999	1
EZH2	GNAQ	0.999	1
EZH2	RIPK4	0.999	1
EZH2	TP63	0.999	1
FAM58A	MSTN	0.999	1
FGFR2	NBPF1	0.999	1
FGFR2	NF1	0.999	1
FGFR2	PARM1	0.999	1
FGFR2	RAC1	0.999	1
FGFR2	RELN	0.999	1
FGFR2	TRERF1	0.999	1
FLT1	FRMPD4	0.999	1
FLT1	GLI1	0.999	1
FLT1	MYO3B	0.999	1
FLT1	RIPK4	0.999	1
FRMPD4	GNAQ	0.999	1
FRMPD4	GUCY2F	0.999	1
FRMPD4	PARM1	0.999	1
FRMPD4	STK19	0.999	1
GLI1	IGF1R	0.999	1
GLI1	KEL	0.999	1
GLI1	MPP7	0.999	1
GLI1	SELP	0.999	1
GLI1	SLC9A11	0.999	1
GML	TRERF1	0.999	1
GML	Amp_1q21.3	0.999	1
GNAQ	RIPK4	0.999	1
GUCY2F	NF1	0.999	1
GUCY2F	NGF	0.999	1
GUCY2F	S100A8	0.999	1
GUCY2F	STK19	0.999	1
GUCY2F	THSD7B	0.999	1
HRAS	SELP	0.999	1
HSD11B1	MYO3B	0.999	1
HSD11B1	PPP6C	0.999	1
HSD11B1	ZNF780B	0.999	1
KCND2	MPP7	0.999	1
KCND2	PTPN22	0.999	1
KCND2	SLC38A4	0.999	1
KCND2	THSD7B	0.999	1
KCND2	TP63	0.999	1
KEL	KIT	0.999	1
KEL	NAP1L2	0.999	1
KEL	PARM1	0.999	1
KEL	SLC9A11	0.999	1
KIT	MYO16	0.999	1
KRT73	RELN	0.999	1
KRT73	TP63	0.999	1
KRT73	TPTE	0.999	1
KRTAP5-10	OR4S2	0.999	1
KRTAP5-10	USP9X	0.999	1
KYNU	NUP214	0.999	1
LGR6	OXA1L	0.999	1
LGR6	PDGFRA	0.999	1
LGR6	RPTN	0.999	1
LGR6	TTN	0.999	1
MAN1A1	MSTN	0.999	1
MAN1A1	PDGFRA	0.999	1
MAN1A1	TRERF1	0.999	1
MAN1A1	ZNF780B	0.999	1
MAP2K1	MYO16	0.999	1
MLL	RELN	0.999	1
MLL	RPTN	0.999	1
MPP7	NF1	0.999	1
MPP7	PDGFRA	0.999	1
MPP7	SYK	0.999	1
MPP7	Del_12q23.3	0.999	1
MSTN	MYO3B	0.999	1
MSTN	NAP1L2	0.999	1
MSTN	NBPF1	0.999	1
MSTN	POTEG	0.999	1
MSTN	RELN	0.999	1
MSTN	TRERF1	0.999	1
MYO16	NBPF1	0.999	1
MYO16	OR6C74	0.999	1
MYO16	TPTE	0.999	1
MYO16	USH2A	0.999	1
MYO3B	NAP1L2	0.999	1
MYO3B	TP53	0.999	1
MYO3B	ZNF780B	0.999	1
NAP1L2	NBPF1	0.999	1
NAP1L2	OR4S2	0.999	1
NAP1L2	ZFX	0.999	1
NBPF1	SELP	0.999	1
NBPF1	TP53	0.999	1
NBPF1	TTN	0.999	1
NF1	NUP214	0.999	1
NF1	POTEG	0.999	1
NF1	RPTN	0.999	1
NF1	S100A8	0.999	1
NF1	THSD7B	0.999	1
NF1	TRERF1	0.999	1
NF1	USP17L2	0.999	1
NGF	S100A8	0.999	1
NGF	XIRP2	0.999	1
NRAS	Amp_1q44	0.999	1
NRAS	Amp_6p24.3	0.999	1
NUP214	PTPN22	0.999	1
NUP214	TRERF1	0.999	1
NUP214	USH2A	0.999	1
OR4S2	OR6C74	0.999	1
OR6C74	OXA1L	0.999	1
OXA1L	PTPN11	0.999	1
PARM1	POTEG	0.999	1
PDGFRA	RAC1	0.999	1
PDGFRA	RPTN	0.999	1
PDGFRA	TP63	0.999	1
POTEG	TTN	0.999	1
PTEN	10p-Del	0.999	1
PTPN22	TP53	0.999	1
PTPN22	TP63	0.999	1
RAC1	S100A8	0.999	1
RAC1	TTN	0.999	1
RIPK4	TPTE	0.999	1
RPTN	STK19	0.999	1
RPTN	USP9X	0.999	1
RPTN	ZNF780B	0.999	1
RQCD1	USP9X	0.999	1
SELP	SYK	0.999	1
SELP	TPTE	0.999	1
SLC38A4	TP63	0.999	1
SLC9A11	SYK	0.999	1
SLC9A11	TP63	0.999	1
SYK	XIRP2	0.999	1
TP53	TTN	0.999	1
TP53	USH2A	0.999	1
TRERF1	USH2A	0.999	1
TRERF1	ZNF780B	0.999	1
USP17L2	XIRP2	0.999	1
13q-Amp	1q-Amp	0.999	1
1q-Amp	22q-Amp	0.999	1
1q-Amp	6p-Amp	0.999	1
1q-Amp	Amp_20q13.33	0.999	1
20p-Amp	8p-Amp	0.999	1
20p-Amp	Amp_1q44	0.999	1
20q-Amp	Amp_6p24.3	0.999	1
22q-Amp	Amp_7q34	0.999	1
22q-Amp	Amp_8q24.21	0.999	1
6p-Amp	Del_8p23.3	0.999	1
7p-Amp	Amp_20q13.33	0.999	1
8p-Amp	10p-Del	0.999	1
8p-Amp	Amp_20q13.33	0.999	1
8q-Amp	10p-Del	0.999	1
8q-Amp	11q-Del	0.999	1
8q-Amp	Amp_1q44	0.999	1
8q-Amp	Del_8p23.3	0.999	1
8q-Amp	Del_10p15.3	0.999	1
8q-Amp	Del_10q23.31	0.999	1
10p-Del	16q-Del	0.999	1
10p-Del	Del_4q34.3	0.999	1
10q-Del	5q-Del	0.999	1
10q-Del	Del_1p36.31	0.999	1
10q-Del	Del_3q13.31	0.999	1
10q-Del	Del_4q34.3	0.999	1
10q-Del	Del_8p23.3	0.999	1
10q-Del	Del_15q13.3	0.999	1
10q-Del	Del_16q12.1	0.999	1
10q-Del	Del_19p13.3	0.999	1
11p-Del	Del_10q21.1	0.999	1
11p-Del	Del_10q23.31	0.999	1
11p-Del	Del_14q23.3	0.999	1
11q-Del	Amp_7p22.1	0.999	1
11q-Del	Del_8p23.3	0.999	1
11q-Del	Del_10q26.3	0.999	1
11q-Del	Del_19p13.3	0.999	1
14q-Del	18p-Del	0.999	1
14q-Del	Del_5q31.3	0.999	1
14q-Del	Del_8p23.3	0.999	1
14q-Del	Del_10q23.31	0.999	1
14q-Del	Del_16q12.1	0.999	1
14q-Del	Del_16q23.1	0.999	1
14q-Del	Del_19p13.3	0.999	1
16q-Del	Del_1p22.1	0.999	1
16q-Del	Del_4p16.3	0.999	1
16q-Del	Del_6q21	0.999	1
16q-Del	Del_6q26	0.999	1
16q-Del	Del_10p15.3	0.999	1
17p-Del	6q-Del	0.999	1
17p-Del	Del_5q31.3	0.999	1
17p-Del	Del_10q26.3	0.999	1
18p-Del	Del_5q12.1	0.999	1
18p-Del	Del_6q21	0.999	1
5q-Del	Del_10q23.31	0.999	1
5q-Del	Del_10q26.3	0.999	1
6p-Del	Del_1p22.1	0.999	1
6p-Del	Del_16q24.3	0.999	1
6p-Del	Del_19p13.3	0.999	1
6q-Del	Del_5q12.1	0.999	1
6q-Del	Del_10p15.3	0.999	1
9p-Del	Del_5p15.31	0.999	1
9q-Del	Del_16p13.3	0.999	1
9q-Del	Del_16q12.1	0.999	1
Amp_1p12	Amp_4q12	0.999	1
Amp_1q21.3	Amp_8q24.21	0.999	1
Amp_1q44	Amp_17q25.3	0.999	1
Amp_4q12	Amp_15q26.2	0.999	1
Amp_5p15.33	Amp_22q13.2	0.999	1
Amp_6p24.3	Amp_7p22.1	0.999	1
Amp_6p24.3	Amp_15q26.2	0.999	1
Amp_6p24.3	Del_11q23.3	0.999	1
Amp_7p22.1	Del_9p23	0.999	1
Amp_7q34	Del_14q23.3	0.999	1
Amp_8q24.21	Amp_22q13.2	0.999	1
Amp_8q24.21	Del_9p23	0.999	1
Amp_8q24.21	Del_10q26.3	0.999	1
Amp_8q24.21	Del_15q21.1	0.999	1
Amp_11q13.3	Del_1p22.1	0.999	1
Amp_12q14.1	Del_15q21.1	0.999	1
Amp_12q15	Del_15q13.3	0.999	1
Amp_12q15	Del_15q21.1	0.999	1
Amp_13q31.3	Amp_20q13.33	0.999	1
Amp_17q25.3	Del_2q37.3	0.999	1
Amp_20q13.33	Del_11q23.3	0.999	1
Del_1p36.31	Del_10q26.3	0.999	1
Del_1p36.31	Del_12q23.3	0.999	1
Del_1p36.31	Del_15q13.3	0.999	1
Del_1p22.1	Del_5q12.1	0.999	1
Del_1p22.1	Del_11q23.3	0.999	1
Del_1p22.1	Del_12q23.3	0.999	1
Del_1p22.1	Del_16q24.3	0.999	1
Del_2q37.3	Del_10q26.3	0.999	1
Del_2q37.3	Del_15q21.1	0.999	1
Del_3q13.31	Del_10q21.1	0.999	1
Del_4p16.3	Del_5q12.1	0.999	1
Del_4q34.3	Del_10p15.3	0.999	1
Del_5p15.31	Del_9p21.3	0.999	1
Del_5q12.1	Del_6q26	0.999	1
Del_5q12.1	Del_10q21.1	0.999	1
Del_5q31.3	Del_10q23.31	0.999	1
Del_5q31.3	Del_14q23.3	0.999	1
Del_5q31.3	Del_Xp21.1	0.999	1
Del_6q21	Del_16q12.1	0.999	1
Del_8p23.3	Del_11q23.3	0.999	1
Del_9p23	Del_15q13.3	0.999	1
Del_9p23	Del_16q24.3	0.999	1
Del_9p21.3	Del_16q23.1	0.999	1
Del_10p15.3	Del_19p13.3	0.999	1
Del_10q21.1	Del_15q21.1	0.999	1
Del_10q21.1	Del_19p13.3	0.999	1
Del_10q23.31	Del_16q12.1	0.999	1
Del_10q23.31	Del_16q23.1	0.999	1
Del_10q23.31	Del_16q24.3	0.999	1
Del_11q23.3	Del_16q23.1	0.999	1
Del_12q23.3	Del_16q12.1	0.999	1
Del_12q23.3	Del_16q24.3	0.999	1
Del_14q23.3	Del_15q13.3	0.999	1
Del_14q23.3	Del_16q12.1	0.999	1
Del_14q23.3	Del_16q23.1	0.999	1
Del_15q13.3	Del_16p13.3	0.999	1
Del_15q13.3	Del_16q12.1	0.999	1
Del_15q21.1	Del_16q23.1	0.999	1
ACSBG1	DCLK3	1	1
ACSBG1	FGFR2	1	1
ACSBG1	HRAS	1	1
ACSBG1	HSD11B1	1	1
ACSBG1	KRTAP5-10	1	1
ACSBG1	PTPN22	1	1
ACSBG1	USP17L2	1	1
ACSBG1	XIRP2	1	1
ACSBG1	ZNF780B	1	1
ALPK2	ANO4	1	1
ALPK2	ARID2	1	1
ALPK2	CAMTA1	1	1
ALPK2	CDC42BPA	1	1
ALPK2	COL3A1	1	1
ALPK2	CPA3	1	1
ALPK2	CYP3A4	1	1
ALPK2	DCLK3	1	1
ALPK2	DSG3	1	1
ALPK2	EPHA4	1	1
ALPK2	EPHA6	1	1
ALPK2	EPHA7	1	1
ALPK2	FGFR2	1	1
ALPK2	FLT1	1	1
ALPK2	KCND2	1	1
ALPK2	KEL	1	1
ALPK2	LGR6	1	1
ALPK2	MAN1A1	1	1
ALPK2	MPP7	1	1
ALPK2	MYO3B	1	1
ALPK2	NF1	1	1
ALPK2	NUP214	1	1
ALPK2	PDGFRA	1	1
ALPK2	PTPN22	1	1
ALPK2	RAC1	1	1
ALPK2	RELN	1	1
ALPK2	RIPK4	1	1
ALPK2	RPTN	1	1
ALPK2	SELP	1	1
ALPK2	SLC9A11	1	1
ALPK2	THSD7B	1	1
ALPK2	TP53	1	1
ALPK2	TP63	1	1
ALPK2	TPTE	1	1
ALPK2	TRERF1	1	1
ALPK2	TTN	1	1
ALPK2	USH2A	1	1
ALPK2	XIRP2	1	1
ALPK2	ZNF780B	1	1
ANO4	ARID2	1	1
ANO4	ATP5F1	1	1
ANO4	C10orf54	1	1
ANO4	CAMTA1	1	1
ANO4	CNTN5	1	1
ANO4	COL3A1	1	1
ANO4	CYP3A4	1	1
ANO4	DCLK3	1	1
ANO4	EPHA4	1	1
ANO4	EPHA6	1	1
ANO4	EPHA7	1	1
ANO4	FAM58A	1	1
ANO4	FGFR2	1	1
ANO4	FLT1	1	1
ANO4	KEL	1	1
ANO4	LGR6	1	1
ANO4	MAN1A1	1	1
ANO4	MYO3B	1	1
ANO4	NF1	1	1
ANO4	NUP214	1	1
ANO4	RPTN	1	1
ANO4	S100A8	1	1
ANO4	SLC38A4	1	1
ANO4	SLC9A11	1	1
ANO4	THSD7B	1	1
ANO4	TP63	1	1
ANO4	TTN	1	1
ANO4	USH2A	1	1
ANO4	XIRP2	1	1
APC	CDC42BPA	1	1
APC	FLT1	1	1
APC	KCND2	1	1
APC	NUP214	1	1
APC	PARM1	1	1
APC	TP63	1	1
APCS	NF1	1	1
ARID2	CAMTA1	1	1
ARID2	EPHA6	1	1
ARID2	EPHA7	1	1
ARID2	GUCY2F	1	1
ARID2	KEL	1	1
ARID2	MYO3B	1	1
ARID2	NF1	1	1
ARID2	RPTN	1	1
ARID2	SELP	1	1
ARID2	SLC27A5	1	1
ARID2	SLC9A11	1	1
ARID2	THSD7B	1	1
ARID2	TPTE	1	1
ARID2	TRERF1	1	1
ARID2	TTN	1	1
ARID2	USH2A	1	1
ARID2	USP17L2	1	1
ARID2	XIRP2	1	1
ATP5F1	CYP3A4	1	1
ATP5F1	FGFR2	1	1
ATP5F1	FLT1	1	1
ATP5F1	NF1	1	1
ATP5F1	NUP214	1	1
ATP5F1	S100A8	1	1
ATP5F1	TTN	1	1
ATP5F1	XIRP2	1	1
BRAF	7p-Amp	1	1
BRAF	7q-Amp	1	1
BRAF	Amp_7q34	1	1
BTK	CDKN2A	1	1
BTK	DCLK3	1	1
BTK	HSD11B1	1	1
BTK	RPTN	1	1
BTK	TTN	1	1
BTK	XIRP2	1	1
C10orf28	PTPN22	1	1
C10orf28	TTN	1	1
C10orf54	FAM58A	1	1
C10orf54	MAN1A1	1	1
C10orf54	NF1	1	1
C15orf23	COL3A1	1	1
C15orf23	KRT73	1	1
C15orf23	SLC38A4	1	1
C7orf58	DDX3X	1	1
C7orf58	IDH1	1	1
C7orf58	KCND2	1	1
C7orf58	KRT73	1	1
C7orf58	MAN1A1	1	1
C7orf58	MLL	1	1
C7orf58	MYO16	1	1
C7orf58	TRERF1	1	1
C7orf58	USH2A	1	1
C7orf58	USP9X	1	1
C7orf58	ZNF780B	1	1
CAMTA1	COL3A1	1	1
CAMTA1	CTNNA3	1	1
CAMTA1	EPHA7	1	1
CAMTA1	GLI1	1	1
CAMTA1	LGR6	1	1
CAMTA1	PTPN11	1	1
CAMTA1	RELN	1	1
CAMTA1	RIPK4	1	1
CAMTA1	RPTN	1	1
CAMTA1	SELP	1	1
CAMTA1	SLC9A11	1	1
CAMTA1	THSD7B	1	1
CAMTA1	TP63	1	1
CAMTA1	TTN	1	1
CAMTA1	USH2A	1	1
CAMTA1	USP9X	1	1
CAMTA1	XIRP2	1	1
CBL	FAM58A	1	1
CBL	SLC38A4	1	1
CCNA1	PTPN22	1	1
CCNA1	RQCD1	1	1
CCNA1	TTN	1	1
CDC42BPA	COL3A1	1	1
CDC42BPA	EPHA6	1	1
CDC42BPA	EPHA7	1	1
CDC42BPA	FLT1	1	1
CDC42BPA	IGF1R	1	1
CDC42BPA	MAN1A1	1	1
CDC42BPA	MSTN	1	1
CDC42BPA	MYO3B	1	1
CDC42BPA	NBPF1	1	1
CDC42BPA	NF1	1	1
CDC42BPA	RQCD1	1	1
CDC42BPA	TP63	1	1
CDC42BPA	USH2A	1	1
CDC42BPA	USP9X	1	1
CDK4	TP53	1	1
CDKN2A	DCLK3	1	1
CDKN2A	PTPN11	1	1
CDKN2A	RELN	1	1
CDKN2A	RPTN	1	1
CDKN2A	THSD7B	1	1
CDKN2A	TTN	1	1
CDKN2A	XIRP2	1	1
CNTN5	COL3A1	1	1
CNTN5	CPA3	1	1
CNTN5	CYP3A4	1	1
CNTN5	DCLK3	1	1
CNTN5	EPHA6	1	1
CNTN5	EPHA7	1	1
CNTN5	GLI1	1	1
CNTN5	MPP7	1	1
CNTN5	MYO16	1	1
CNTN5	MYO3B	1	1
CNTN5	NF1	1	1
CNTN5	RPTN	1	1
CNTN5	S100A8	1	1
CNTN5	SLC38A4	1	1
CNTN5	SLC9A11	1	1
CNTN5	TP53	1	1
CNTN5	TPTE	1	1
CNTN5	TTN	1	1
CNTN5	USH2A	1	1
CNTN5	XIRP2	1	1
COL3A1	DCLK3	1	1
COL3A1	EPHA6	1	1
COL3A1	EPHA7	1	1
COL3A1	FLT1	1	1
COL3A1	GLI1	1	1
COL3A1	KEL	1	1
COL3A1	KRT73	1	1
COL3A1	MAN1A1	1	1
COL3A1	MPP7	1	1
COL3A1	MYO16	1	1
COL3A1	NAP1L2	1	1
COL3A1	NF1	1	1
COL3A1	NUP214	1	1
COL3A1	OR6C74	1	1
COL3A1	RELN	1	1
COL3A1	RIPK4	1	1
COL3A1	RPTN	1	1
COL3A1	SLC38A4	1	1
COL3A1	SLC9A11	1	1
COL3A1	THSD7B	1	1
COL3A1	TP63	1	1
COL3A1	TPTE	1	1
COL3A1	TTN	1	1
COL3A1	USH2A	1	1
COL3A1	USP17L2	1	1
COL3A1	XIRP2	1	1
CPA3	EPHA4	1	1
CPA3	MYO16	1	1
CPA3	TP53	1	1
CPA3	TP63	1	1
CPA3	TTN	1	1
CPA3	USH2A	1	1
CPA3	17p-Del	1	1
CTNNA3	CYP3A4	1	1
CTNNA3	EPHA4	1	1
CTNNA3	KEL	1	1
CTNNA3	KRT73	1	1
CTNNA3	LGR6	1	1
CTNNA3	MPP7	1	1
CTNNA3	MSTN	1	1
CTNNA3	NF1	1	1
CTNNA3	PTPN11	1	1
CTNNA3	RELN	1	1
CTNNA3	SLC38A4	1	1
CTNNA3	SLC9A11	1	1
CTNNA3	TRERF1	1	1
CTNNA3	XIRP2	1	1
CTNNA3	ZFX	1	1
CYP3A4	DCLK3	1	1
CYP3A4	MSTN	1	1
CYP3A4	NUP214	1	1
CYP3A4	OR4S2	1	1
CYP3A4	POTEG	1	1
CYP3A4	RELN	1	1
CYP3A4	RPTN	1	1
CYP3A4	USH2A	1	1
DCLK3	DMC1	1	1
DCLK3	EPHA6	1	1
DCLK3	EPHA7	1	1
DCLK3	FGFR2	1	1
DCLK3	FLT1	1	1
DCLK3	FRMPD4	1	1
DCLK3	KCND2	1	1
DCLK3	KRT73	1	1
DCLK3	MLL	1	1
DCLK3	MYO16	1	1
DCLK3	MYO3B	1	1
DCLK3	NAP1L2	1	1
DCLK3	NBPF1	1	1
DCLK3	NF1	1	1
DCLK3	NGF	1	1
DCLK3	NUP214	1	1
DCLK3	OR4S2	1	1
DCLK3	OR6C74	1	1
DCLK3	OXA1L	1	1
DCLK3	PDGFRA	1	1
DCLK3	RIPK4	1	1
DCLK3	RPTN	1	1
DCLK3	S100A8	1	1
DCLK3	SELP	1	1
DCLK3	SLC38A4	1	1
DCLK3	SLC9A11	1	1
DCLK3	STK19	1	1
DCLK3	THSD7B	1	1
DCLK3	TP53	1	1
DCLK3	TP63	1	1
DCLK3	TPTE	1	1
DCLK3	TTN	1	1
DCLK3	USH2A	1	1
DCLK3	USP17L2	1	1
DCLK3	USP9X	1	1
DCLK3	XIRP2	1	1
DCLK3	ZNF780B	1	1
DDX3X	MLL	1	1
DDX3X	20q-Amp	1	1
DDX3X	Amp_20q13.33	1	1
DSG3	EPHA6	1	1
DSG3	FLT1	1	1
DSG3	GML	1	1
DSG3	KCND2	1	1
DSG3	MLL	1	1
DSG3	MYO3B	1	1
DSG3	NBPF1	1	1
DSG3	NF1	1	1
DSG3	POTEG	1	1
DSG3	RPTN	1	1
DSG3	SLC9A11	1	1
DSG3	TP63	1	1
DSG3	TPTE	1	1
DSG3	TTN	1	1
DSG3	USH2A	1	1
DSG3	XIRP2	1	1
EMG1	TTN	1	1
EPHA4	FLT1	1	1
EPHA4	KRTAP5-10	1	1
EPHA4	RIPK4	1	1
EPHA4	THSD7B	1	1
EPHA4	TRERF1	1	1
EPHA6	EPHA7	1	1
EPHA6	KEL	1	1
EPHA6	MAN1A1	1	1
EPHA6	MLL	1	1
EPHA6	MSTN	1	1
EPHA6	MYO3B	1	1
EPHA6	NAP1L2	1	1
EPHA6	NF1	1	1
EPHA6	PARM1	1	1
EPHA6	PDGFRA	1	1
EPHA6	PTPN22	1	1
EPHA6	RAC1	1	1
EPHA6	RPTN	1	1
EPHA6	S100A8	1	1
EPHA6	SELP	1	1
EPHA6	SLC27A5	1	1
EPHA6	SLC38A4	1	1
EPHA6	SLC9A11	1	1
EPHA6	SYK	1	1
EPHA6	THSD7B	1	1
EPHA6	TPTE	1	1
EPHA6	TTN	1	1
EPHA6	USH2A	1	1
EPHA6	XIRP2	1	1
EPHA6	ZNF780B	1	1
EPHA7	FLT1	1	1
EPHA7	FRMPD4	1	1
EPHA7	GUCY2F	1	1
EPHA7	MAN1A1	1	1
EPHA7	MPP7	1	1
EPHA7	MYO3B	1	1
EPHA7	NBPF1	1	1
EPHA7	NF1	1	1
EPHA7	OXA1L	1	1
EPHA7	PARM1	1	1
EPHA7	PDGFRA	1	1
EPHA7	RPTN	1	1
EPHA7	SELP	1	1
EPHA7	STK19	1	1
EPHA7	SYK	1	1
EPHA7	THSD7B	1	1
EPHA7	TP53	1	1
EPHA7	TP63	1	1
EPHA7	TPTE	1	1
EPHA7	TRERF1	1	1
EPHA7	TTN	1	1
EPHA7	USH2A	1	1
EPHA7	XIRP2	1	1
EZH2	FRMPD4	1	1
EZH2	PTPN11	1	1
EZH2	RPTN	1	1
EZH2	RQCD1	1	1
EZH2	TTN	1	1
FAM58A	KRAS	1	1
FAM58A	MAN1A1	1	1
FAM58A	NF1	1	1
FAM58A	RB1	1	1
FAM58A	SLC38A4	1	1
FAM58A	TTN	1	1
FGFR2	FLT1	1	1
FGFR2	KCND2	1	1
FGFR2	KRT73	1	1
FGFR2	MPP7	1	1
FGFR2	MSTN	1	1
FGFR2	MYO3B	1	1
FGFR2	NAP1L2	1	1
FGFR2	POTEG	1	1
FGFR2	SELP	1	1
FGFR2	SLC38A4	1	1
FGFR2	SLC9A11	1	1
FGFR2	TP53	1	1
FGFR2	TTN	1	1
FGFR2	XIRP2	1	1
FLT1	KEL	1	1
FLT1	KRT73	1	1
FLT1	NAP1L2	1	1
FLT1	NBPF1	1	1
FLT1	NUP214	1	1
FLT1	OR4S2	1	1
FLT1	RPTN	1	1
FLT1	SLC9A11	1	1
FLT1	SYK	1	1
FLT1	THSD7B	1	1
FLT1	TP63	1	1
FLT1	TPTE	1	1
FLT1	TRERF1	1	1
FLT1	USH2A	1	1
FLT1	USP17L2	1	1
FLT1	XIRP2	1	1
FLT1	ZNF780B	1	1
FRMPD4	MYO3B	1	1
FRMPD4	NF1	1	1
FRMPD4	OXA1L	1	1
FRMPD4	RIPK4	1	1
FRMPD4	RPTN	1	1
FRMPD4	S100A8	1	1
FRMPD4	TP63	1	1
FRMPD4	TPTE	1	1
GLI1	MSTN	1	1
GLI1	PDGFRA	1	1
GLI1	SYK	1	1
GLI1	XIRP2	1	1
GML	NAP1L2	1	1
GML	TTN	1	1
GML	Amp_20q13.33	1	1
GUCY2F	KEL	1	1
GUCY2F	RPTN	1	1
GUCY2F	TPTE	1	1
HRAS	TTN	1	1
HRAS	ZFX	1	1
HSD11B1	SLC38A4	1	1
HSD11B1	TTN	1	1
HSD11B1	USH2A	1	1
HSD11B1	USP17L2	1	1
IGF1R	KRTAP5-10	1	1
IGF1R	USP9X	1	1
KCND2	KRT73	1	1
KCND2	MYO16	1	1
KCND2	MYO3B	1	1
KCND2	NAP1L2	1	1
KCND2	NBPF1	1	1
KCND2	NF1	1	1
KCND2	RPTN	1	1
KCND2	STK19	1	1
KCND2	TP53	1	1
KCND2	TPTE	1	1
KCND2	TTN	1	1
KCND2	USH2A	1	1
KCND2	XIRP2	1	1
KEL	LGR6	1	1
KEL	MSTN	1	1
KEL	MYO3B	1	1
KEL	NF1	1	1
KEL	NUP214	1	1
KEL	OR4S2	1	1
KEL	PTPN22	1	1
KEL	RPTN	1	1
KEL	SLC27A5	1	1
KEL	SLC38A4	1	1
KEL	STK19	1	1
KEL	THSD7B	1	1
KEL	TP63	1	1
KEL	TPTE	1	1
KEL	TTN	1	1
KEL	USH2A	1	1
KEL	USP17L2	1	1
KEL	XIRP2	1	1
KEL	ZNF780B	1	1
KIT	MSTN	1	1
KIT	Amp_4q12	1	1
KRAS	RB1	1	1
KRT73	MSTN	1	1
KRT73	NAP1L2	1	1
KRT73	NBPF1	1	1
KRT73	NF1	1	1
KRT73	OXA1L	1	1
KRT73	SLC38A4	1	1
KRT73	SLC9A11	1	1
KRT73	USP17L2	1	1
KRTAP5-10	TTN	1	1
KYNU	TP63	1	1
LGR6	MSTN	1	1
LGR6	USP9X	1	1
MAN1A1	MLL	1	1
MAN1A1	MYO3B	1	1
MAN1A1	NUP214	1	1
MAN1A1	PARM1	1	1
MAN1A1	RPTN	1	1
MAN1A1	THSD7B	1	1
MAN1A1	TP63	1	1
MAN1A1	USH2A	1	1
MLL	NF1	1	1
MLL	OR6C74	1	1
MLL	TP53	1	1
MLL	TPTE	1	1
MLL	USH2A	1	1
MLL	XIRP2	1	1
MPP7	MYO3B	1	1
MPP7	SLC9A11	1	1
MPP7	TTN	1	1
MPP7	USH2A	1	1
MPP7	XIRP2	1	1
MSTN	NF1	1	1
MSTN	PARM1	1	1
MSTN	SLC38A4	1	1
MSTN	SLC9A11	1	1
MSTN	SYK	1	1
MSTN	TP53	1	1
MSTN	TTN	1	1
MSTN	XIRP2	1	1
MYO16	NAP1L2	1	1
MYO16	S100A8	1	1
MYO16	TP53	1	1
MYO16	XIRP2	1	1
MYO3B	NBPF1	1	1
MYO3B	NF1	1	1
MYO3B	OXA1L	1	1
MYO3B	PARM1	1	1
MYO3B	PDGFRA	1	1
MYO3B	RPTN	1	1
MYO3B	SELP	1	1
MYO3B	SYK	1	1
MYO3B	THSD7B	1	1
MYO3B	USH2A	1	1
MYO3B	USP17L2	1	1
MYO3B	XIRP2	1	1
NAP1L2	NF1	1	1
NAP1L2	PARM1	1	1
NAP1L2	POTEG	1	1
NAP1L2	SELP	1	1
NAP1L2	SLC38A4	1	1
NAP1L2	SLC9A11	1	1
NAP1L2	TP63	1	1
NAP1L2	TPTE	1	1
NAP1L2	TTN	1	1
NAP1L2	USH2A	1	1
NAP1L2	XIRP2	1	1
NBPF1	NF1	1	1
NBPF1	SLC9A11	1	1
NBPF1	TP63	1	1
NBPF1	USH2A	1	1
NBPF1	USP9X	1	1
NBPF1	XIRP2	1	1
NF1	OXA1L	1	1
NF1	PARM1	1	1
NF1	PDGFRA	1	1
NF1	SLC38A4	1	1
NF1	SLC9A11	1	1
NF1	TP63	1	1
NF1	TPTE	1	1
NF1	TTN	1	1
NF1	USH2A	1	1
NF1	XIRP2	1	1
NF1	ZFX	1	1
NRAS	17p-Del	1	1
NUP214	OR4S2	1	1
NUP214	SLC9A11	1	1
NUP214	THSD7B	1	1
NUP214	TP63	1	1
NUP214	ZNF780B	1	1
OXA1L	SLC38A4	1	1
OXA1L	SYK	1	1
OXA1L	TP63	1	1
OXA1L	TTN	1	1
OXA1L	XIRP2	1	1
OXA1L	Del_2q37.3	1	1
PARM1	PDGFRA	1	1
PARM1	RAC1	1	1
PARM1	STK19	1	1
PARM1	THSD7B	1	1
PARM1	TPTE	1	1
PARM1	TTN	1	1
PARM1	USH2A	1	1
PDGFRA	SLC9A11	1	1
PDGFRA	USP17L2	1	1
PDGFRA	XIRP2	1	1
PDGFRA	ZNF780B	1	1
POTEG	SELP	1	1
POTEG	THSD7B	1	1
POTEG	USH2A	1	1
POTEG	XIRP2	1	1
PTEN	10q-Del	1	1
PTEN	Del_10q21.1	1	1
PTEN	Del_10q23.31	1	1
PTEN	Del_10q26.3	1	1
PTPN11	TTN	1	1
PTPN11	XIRP2	1	1
PTPN22	RPTN	1	1
PTPN22	THSD7B	1	1
PTPN22	TTN	1	1
RAC1	SYK	1	1
RAC1	USH2A	1	1
RB1	13q-Amp	1	1
RB1	Amp_13q31.3	1	1
RELN	RPTN	1	1
RELN	SELP	1	1
RELN	SLC38A4	1	1
RELN	TTN	1	1
RELN	USH2A	1	1
RELN	USP17L2	1	1
RELN	XIRP2	1	1
RIPK4	RQCD1	1	1
RIPK4	STK19	1	1
RIPK4	TP63	1	1
RIPK4	TTN	1	1
RIPK4	USP17L2	1	1
RIPK4	USP9X	1	1
RPTN	SELP	1	1
RPTN	SLC27A5	1	1
RPTN	SLC38A4	1	1
RPTN	SLC9A11	1	1
RPTN	THSD7B	1	1
RPTN	TP63	1	1
RPTN	TPTE	1	1
RPTN	TTN	1	1
RPTN	USH2A	1	1
RPTN	USP17L2	1	1
RPTN	XIRP2	1	1
RQCD1	1q-Amp	1	1
S100A8	TTN	1	1
SELP	SLC9A11	1	1
SELP	THSD7B	1	1
SELP	TP63	1	1
SELP	TTN	1	1
SELP	USH2A	1	1
SELP	USP17L2	1	1
SELP	XIRP2	1	1
SLC27A5	THSD7B	1	1
SLC27A5	TTN	1	1
SLC27A5	XIRP2	1	1
SLC38A4	SLC9A11	1	1
SLC38A4	THSD7B	1	1
SLC38A4	TPTE	1	1
SLC38A4	TTN	1	1
SLC38A4	USP17L2	1	1
SLC9A11	THSD7B	1	1
SLC9A11	TRERF1	1	1
SLC9A11	TTN	1	1
SLC9A11	USP17L2	1	1
SLC9A11	XIRP2	1	1
SLC9A11	ZNF780B	1	1
STK19	TP53	1	1
STK19	TP63	1	1
STK19	TTN	1	1
SYK	USH2A	1	1
THSD7B	TP63	1	1
THSD7B	TPTE	1	1
THSD7B	TRERF1	1	1
THSD7B	TTN	1	1
THSD7B	USH2A	1	1
THSD7B	USP17L2	1	1
THSD7B	XIRP2	1	1
TP53	TP63	1	1
TP53	TPTE	1	1
TP53	17p-Del	1	1
TP63	TPTE	1	1
TP63	TRERF1	1	1
TP63	TTN	1	1
TP63	USH2A	1	1
TP63	XIRP2	1	1
TP63	ZNF780B	1	1
TPTE	TTN	1	1
TPTE	USH2A	1	1
TPTE	XIRP2	1	1
TTN	USH2A	1	1
TTN	XIRP2	1	1
USH2A	XIRP2	1	1
USP9X	XIRP2	1	1
XIRP2	ZNF780B	1	1
13q-Amp	6p-Amp	1	1
13q-Amp	Amp_6p24.3	1	1
13q-Amp	Amp_13q31.3	1	1
13q-Amp	Amp_15q26.2	1	1
1q-Amp	20q-Amp	1	1
1q-Amp	8q-Amp	1	1
1q-Amp	Amp_1p12	1	1
1q-Amp	Amp_1q21.3	1	1
1q-Amp	Amp_1q44	1	1
1q-Amp	Amp_6p24.3	1	1
1q-Amp	Amp_8q24.21	1	1
1q-Amp	Amp_13q31.3	1	1
1q-Amp	Amp_17q25.3	1	1
1q-Amp	Amp_22q13.2	1	1
1q-Amp	Del_6q26	1	1
20p-Amp	20q-Amp	1	1
20p-Amp	Amp_20q13.33	1	1
20q-Amp	8p-Amp	1	1
20q-Amp	Amp_1q21.3	1	1
20q-Amp	Amp_1q44	1	1
20q-Amp	Amp_20q13.33	1	1
20q-Amp	Amp_22q13.2	1	1
22q-Amp	Amp_22q13.2	1	1
6p-Amp	8p-Amp	1	1
6p-Amp	8q-Amp	1	1
6p-Amp	Amp_1q44	1	1
6p-Amp	Amp_6p24.3	1	1
6p-Amp	Amp_8q24.21	1	1
6p-Amp	Amp_13q31.3	1	1
6p-Amp	Amp_15q26.2	1	1
7p-Amp	7q-Amp	1	1
7p-Amp	14q-Del	1	1
7p-Amp	18p-Del	1	1
7p-Amp	Amp_7p22.1	1	1
7p-Amp	Amp_7q34	1	1
7p-Amp	Del_9p21.3	1	1
7p-Amp	Del_14q23.3	1	1
7q-Amp	14q-Del	1	1
7q-Amp	Amp_7p22.1	1	1
7q-Amp	Amp_7q34	1	1
7q-Amp	Del_4q34.3	1	1
7q-Amp	Del_9p21.3	1	1
7q-Amp	Del_14q23.3	1	1
8p-Amp	8q-Amp	1	1
8p-Amp	Amp_6p24.3	1	1
8p-Amp	Amp_8q24.21	1	1
8q-Amp	10q-Del	1	1
8q-Amp	Amp_1q21.3	1	1
8q-Amp	Amp_6p24.3	1	1
8q-Amp	Amp_8q24.21	1	1
8q-Amp	Del_10q21.1	1	1
8q-Amp	Del_15q21.1	1	1
10p-Del	10q-Del	1	1
10p-Del	11p-Del	1	1
10p-Del	11q-Del	1	1
10p-Del	14q-Del	1	1
10p-Del	18p-Del	1	1
10p-Del	6q-Del	1	1
10p-Del	9p-Del	1	1
10p-Del	9q-Del	1	1
10p-Del	Del_1p22.1	1	1
10p-Del	Del_3q13.31	1	1
10p-Del	Del_5q31.3	1	1
10p-Del	Del_6q21	1	1
10p-Del	Del_6q26	1	1
10p-Del	Del_9p23	1	1
10p-Del	Del_9p21.3	1	1
10p-Del	Del_10p15.3	1	1
10p-Del	Del_10q21.1	1	1
10p-Del	Del_10q23.31	1	1
10p-Del	Del_10q26.3	1	1
10p-Del	Del_11q23.3	1	1
10p-Del	Del_12q23.3	1	1
10p-Del	Del_14q23.3	1	1
10p-Del	Del_16p13.3	1	1
10q-Del	11p-Del	1	1
10q-Del	11q-Del	1	1
10q-Del	14q-Del	1	1
10q-Del	16q-Del	1	1
10q-Del	18p-Del	1	1
10q-Del	6q-Del	1	1
10q-Del	9p-Del	1	1
10q-Del	9q-Del	1	1
10q-Del	Amp_8q24.21	1	1
10q-Del	Del_1p22.1	1	1
10q-Del	Del_5q31.3	1	1
10q-Del	Del_6q21	1	1
10q-Del	Del_6q26	1	1
10q-Del	Del_9p23	1	1
10q-Del	Del_9p21.3	1	1
10q-Del	Del_10p15.3	1	1
10q-Del	Del_10q21.1	1	1
10q-Del	Del_10q23.31	1	1
10q-Del	Del_10q26.3	1	1
10q-Del	Del_11q23.3	1	1
10q-Del	Del_12q23.3	1	1
10q-Del	Del_14q23.3	1	1
10q-Del	Del_15q21.1	1	1
10q-Del	Del_16p13.3	1	1
10q-Del	Del_16q23.1	1	1
10q-Del	Del_16q24.3	1	1
11p-Del	11q-Del	1	1
11p-Del	14q-Del	1	1
11p-Del	16q-Del	1	1
11p-Del	17p-Del	1	1
11p-Del	18p-Del	1	1
11p-Del	6q-Del	1	1
11p-Del	9p-Del	1	1
11p-Del	9q-Del	1	1
11p-Del	Amp_1p12	1	1
11p-Del	Del_1p22.1	1	1
11p-Del	Del_5q12.1	1	1
11p-Del	Del_5q31.3	1	1
11p-Del	Del_6q21	1	1
11p-Del	Del_6q26	1	1
11p-Del	Del_9p23	1	1
11p-Del	Del_9p21.3	1	1
11p-Del	Del_10p15.3	1	1
11p-Del	Del_11q23.3	1	1
11p-Del	Del_12q23.3	1	1
11p-Del	Del_13q34	1	1
11p-Del	Del_16q12.1	1	1
11p-Del	Del_16q23.1	1	1
11p-Del	Del_19p13.3	1	1
11q-Del	6q-Del	1	1
11q-Del	9p-Del	1	1
11q-Del	Amp_1p12	1	1
11q-Del	Del_1p22.1	1	1
11q-Del	Del_6q21	1	1
11q-Del	Del_6q26	1	1
11q-Del	Del_9p23	1	1
11q-Del	Del_9p21.3	1	1
11q-Del	Del_10p15.3	1	1
11q-Del	Del_10q21.1	1	1
11q-Del	Del_10q23.31	1	1
11q-Del	Del_11q23.3	1	1
11q-Del	Del_15q13.3	1	1
11q-Del	Del_16q12.1	1	1
14q-Del	17p-Del	1	1
14q-Del	6p-Del	1	1
14q-Del	6q-Del	1	1
14q-Del	9p-Del	1	1
14q-Del	Amp_7p22.1	1	1
14q-Del	Del_6q21	1	1
14q-Del	Del_6q26	1	1
14q-Del	Del_9p23	1	1
14q-Del	Del_9p21.3	1	1
14q-Del	Del_10p15.3	1	1
14q-Del	Del_10q21.1	1	1
14q-Del	Del_10q26.3	1	1
14q-Del	Del_12q23.3	1	1
14q-Del	Del_14q23.3	1	1
16q-Del	6q-Del	1	1
16q-Del	9p-Del	1	1
16q-Del	9q-Del	1	1
16q-Del	Del_10q21.1	1	1
16q-Del	Del_10q23.31	1	1
16q-Del	Del_10q26.3	1	1
16q-Del	Del_12q23.3	1	1
16q-Del	Del_15q13.3	1	1
16q-Del	Del_16p13.3	1	1
16q-Del	Del_16q12.1	1	1
16q-Del	Del_16q23.1	1	1
16q-Del	Del_16q24.3	1	1
17p-Del	Del_3q13.31	1	1
17p-Del	Del_10p15.3	1	1
17p-Del	Del_14q23.3	1	1
18p-Del	9p-Del	1	1
18p-Del	9q-Del	1	1
18p-Del	Del_6q26	1	1
18p-Del	Del_9p23	1	1
18p-Del	Del_9p21.3	1	1
18p-Del	Del_10p15.3	1	1
18p-Del	Del_10q21.1	1	1
18p-Del	Del_10q23.31	1	1
18p-Del	Del_10q26.3	1	1
18p-Del	Del_12q23.3	1	1
18p-Del	Del_14q23.3	1	1
5q-Del	9p-Del	1	1
5q-Del	9q-Del	1	1
5q-Del	Del_5p15.31	1	1
5q-Del	Del_5q12.1	1	1
5q-Del	Del_5q31.3	1	1
5q-Del	Del_9p23	1	1
5q-Del	Del_9p21.3	1	1
5q-Del	Del_10q21.1	1	1
5q-Del	Del_Xp21.1	1	1
6p-Del	6q-Del	1	1
6p-Del	Del_5q31.3	1	1
6p-Del	Del_6q21	1	1
6p-Del	Del_6q26	1	1
6p-Del	Del_9p23	1	1
6p-Del	Del_9p21.3	1	1
6p-Del	Del_14q23.3	1	1
6q-Del	9p-Del	1	1
6q-Del	9q-Del	1	1
6q-Del	Del_4q34.3	1	1
6q-Del	Del_5q31.3	1	1
6q-Del	Del_6q21	1	1
6q-Del	Del_6q26	1	1
6q-Del	Del_9p23	1	1
6q-Del	Del_9p21.3	1	1
6q-Del	Del_10q21.1	1	1
6q-Del	Del_10q23.31	1	1
6q-Del	Del_10q26.3	1	1
6q-Del	Del_11q23.3	1	1
6q-Del	Del_12q23.3	1	1
6q-Del	Del_14q23.3	1	1
6q-Del	Del_16q23.1	1	1
6q-Del	Del_16q24.3	1	1
6q-Del	Del_19p13.3	1	1
9p-Del	9q-Del	1	1
9p-Del	Amp_8q24.21	1	1
9p-Del	Del_1p22.1	1	1
9p-Del	Del_5q12.1	1	1
9p-Del	Del_5q31.3	1	1
9p-Del	Del_6q21	1	1
9p-Del	Del_6q26	1	1
9p-Del	Del_9p23	1	1
9p-Del	Del_9p21.3	1	1
9p-Del	Del_10p15.3	1	1
9p-Del	Del_10q21.1	1	1
9p-Del	Del_10q23.31	1	1
9p-Del	Del_10q26.3	1	1
9p-Del	Del_11q23.3	1	1
9p-Del	Del_12q23.3	1	1
9p-Del	Del_14q23.3	1	1
9p-Del	Del_16q12.1	1	1
9p-Del	Del_16q23.1	1	1
9p-Del	Del_16q24.3	1	1
9p-Del	Del_19p13.3	1	1
9q-Del	Del_2q37.3	1	1
9q-Del	Del_5q12.1	1	1
9q-Del	Del_5q31.3	1	1
9q-Del	Del_6q21	1	1
9q-Del	Del_6q26	1	1
9q-Del	Del_9p23	1	1
9q-Del	Del_9p21.3	1	1
9q-Del	Del_10p15.3	1	1
9q-Del	Del_10q21.1	1	1
9q-Del	Del_10q23.31	1	1
9q-Del	Del_10q26.3	1	1
9q-Del	Del_11q23.3	1	1
9q-Del	Del_12q23.3	1	1
9q-Del	Del_13q34	1	1
9q-Del	Del_16q23.1	1	1
9q-Del	Del_16q24.3	1	1
Amp_1p12	Amp_1q21.3	1	1
Amp_1p12	Amp_1q44	1	1
Amp_1p12	Del_10p15.3	1	1
Amp_1q21.3	Amp_1q44	1	1
Amp_1q21.3	Amp_6p24.3	1	1
Amp_1q21.3	Amp_7p22.1	1	1
Amp_1q21.3	Amp_17q25.3	1	1
Amp_1q21.3	Amp_20q13.33	1	1
Amp_1q21.3	Del_6q26	1	1
Amp_1q44	Amp_6p24.3	1	1
Amp_1q44	Amp_7p22.1	1	1
Amp_1q44	Del_6q26	1	1
Amp_1q44	Del_11q23.3	1	1
Amp_4q12	Amp_5p15.33	1	1
Amp_6p24.3	Amp_8q24.21	1	1
Amp_6p24.3	Amp_13q31.3	1	1
Amp_6p24.3	Del_6q21	1	1
Amp_6p24.3	Del_6q26	1	1
Amp_7p22.1	Amp_7q34	1	1
Amp_7p22.1	Del_4q34.3	1	1
Amp_7p22.1	Del_6q21	1	1
Amp_7p22.1	Del_9p21.3	1	1
Amp_7p22.1	Del_14q23.3	1	1
Amp_8q24.21	Del_8p23.3	1	1
Amp_8q24.21	Del_9p21.3	1	1
Amp_8q24.21	Del_10q21.1	1	1
Amp_8q24.21	Del_10q23.31	1	1
Amp_11q13.3	Del_11q23.3	1	1
Amp_12q14.1	Amp_12q15	1	1
Amp_12q14.1	Del_15q13.3	1	1
Amp_12q15	Del_12q23.3	1	1
Amp_13q31.3	Amp_15q26.2	1	1
Amp_20q13.33	Amp_22q13.2	1	1
Del_1p36.31	Del_1p22.1	1	1
Del_1p36.31	Del_2q37.3	1	1
Del_1p36.31	Del_9p23	1	1
Del_1p36.31	Del_9p21.3	1	1
Del_1p36.31	Del_10q23.31	1	1
Del_1p22.1	Del_4p16.3	1	1
Del_1p22.1	Del_9p23	1	1
Del_1p22.1	Del_9p21.3	1	1
Del_1p22.1	Del_10p15.3	1	1
Del_1p22.1	Del_10q21.1	1	1
Del_1p22.1	Del_10q23.31	1	1
Del_1p22.1	Del_10q26.3	1	1
Del_1p22.1	Del_13q34	1	1
Del_1p22.1	Del_16p13.3	1	1
Del_1p22.1	Del_19p13.3	1	1
Del_3q13.31	Del_10q26.3	1	1
Del_4p16.3	Del_4q34.3	1	1
Del_4p16.3	Del_8p23.3	1	1
Del_4p16.3	Del_12q23.3	1	1
Del_4p16.3	Del_16q12.1	1	1
Del_4p16.3	Del_16q23.1	1	1
Del_4p16.3	Del_16q24.3	1	1
Del_4p16.3	Del_19p13.3	1	1
Del_4q34.3	Del_9p21.3	1	1
Del_4q34.3	Del_10q23.31	1	1
Del_4q34.3	Del_10q26.3	1	1
Del_4q34.3	Del_19p13.3	1	1
Del_5p15.31	Del_5q12.1	1	1
Del_5p15.31	Del_5q31.3	1	1
Del_5p15.31	Del_9p23	1	1
Del_5q12.1	Del_5q31.3	1	1
Del_5q12.1	Del_9p23	1	1
Del_5q12.1	Del_9p21.3	1	1
Del_5q12.1	Del_10q26.3	1	1
Del_5q12.1	Del_12q23.3	1	1
Del_5q31.3	Del_6q21	1	1
Del_5q31.3	Del_6q26	1	1
Del_5q31.3	Del_9p23	1	1
Del_5q31.3	Del_9p21.3	1	1
Del_5q31.3	Del_10p15.3	1	1
Del_5q31.3	Del_10q21.1	1	1
Del_5q31.3	Del_10q26.3	1	1
Del_5q31.3	Del_12q23.3	1	1
Del_6q21	Del_6q26	1	1
Del_6q21	Del_9p23	1	1
Del_6q21	Del_9p21.3	1	1
Del_6q21	Del_10p15.3	1	1
Del_6q21	Del_10q21.1	1	1
Del_6q21	Del_10q23.31	1	1
Del_6q21	Del_10q26.3	1	1
Del_6q21	Del_11q23.3	1	1
Del_6q21	Del_12q23.3	1	1
Del_6q21	Del_14q23.3	1	1
Del_6q21	Del_16q23.1	1	1
Del_6q21	Del_16q24.3	1	1
Del_6q26	Del_9p23	1	1
Del_6q26	Del_9p21.3	1	1
Del_6q26	Del_10p15.3	1	1
Del_6q26	Del_10q21.1	1	1
Del_6q26	Del_10q23.31	1	1
Del_6q26	Del_10q26.3	1	1
Del_6q26	Del_11q23.3	1	1
Del_6q26	Del_12q23.3	1	1
Del_6q26	Del_14q23.3	1	1
Del_6q26	Del_16q23.1	1	1
Del_6q26	Del_16q24.3	1	1
Del_6q26	Del_19p13.3	1	1
Del_8p23.3	Del_9p23	1	1
Del_8p23.3	Del_9p21.3	1	1
Del_9p23	Del_9p21.3	1	1
Del_9p23	Del_10p15.3	1	1
Del_9p23	Del_10q21.1	1	1
Del_9p23	Del_10q23.31	1	1
Del_9p23	Del_10q26.3	1	1
Del_9p23	Del_11q23.3	1	1
Del_9p23	Del_12q23.3	1	1
Del_9p23	Del_14q23.3	1	1
Del_9p23	Del_16q12.1	1	1
Del_9p23	Del_16q23.1	1	1
Del_9p23	Del_19p13.3	1	1
Del_9p21.3	Del_10p15.3	1	1
Del_9p21.3	Del_10q21.1	1	1
Del_9p21.3	Del_10q23.31	1	1
Del_9p21.3	Del_10q26.3	1	1
Del_9p21.3	Del_11q23.3	1	1
Del_9p21.3	Del_12q23.3	1	1
Del_9p21.3	Del_14q23.3	1	1
Del_9p21.3	Del_15q13.3	1	1
Del_9p21.3	Del_19p13.3	1	1
Del_10p15.3	Del_10q21.1	1	1
Del_10p15.3	Del_10q23.31	1	1
Del_10p15.3	Del_10q26.3	1	1
Del_10p15.3	Del_11q23.3	1	1
Del_10p15.3	Del_12q23.3	1	1
Del_10p15.3	Del_14q23.3	1	1
Del_10p15.3	Del_16p13.3	1	1
Del_10q21.1	Del_10q23.31	1	1
Del_10q21.1	Del_10q26.3	1	1
Del_10q21.1	Del_12q23.3	1	1
Del_10q21.1	Del_14q23.3	1	1
Del_10q21.1	Del_16p13.3	1	1
Del_10q21.1	Del_16q12.1	1	1
Del_10q21.1	Del_16q23.1	1	1
Del_10q21.1	Del_16q24.3	1	1
Del_10q23.31	Del_10q26.3	1	1
Del_10q23.31	Del_11q23.3	1	1
Del_10q23.31	Del_12q23.3	1	1
Del_10q23.31	Del_14q23.3	1	1
Del_10q23.31	Del_15q13.3	1	1
Del_10q23.31	Del_15q21.1	1	1
Del_10q23.31	Del_16p13.3	1	1
Del_10q23.31	Del_19p13.3	1	1
Del_10q26.3	Del_11q23.3	1	1
Del_10q26.3	Del_12q23.3	1	1
Del_10q26.3	Del_14q23.3	1	1
Del_10q26.3	Del_15q13.3	1	1
Del_10q26.3	Del_15q21.1	1	1
Del_10q26.3	Del_16p13.3	1	1
Del_10q26.3	Del_16q12.1	1	1
Del_10q26.3	Del_16q23.1	1	1
Del_10q26.3	Del_16q24.3	1	1
Del_10q26.3	Del_19p13.3	1	1
Del_11q23.3	Del_12q23.3	1	1
Del_11q23.3	Del_13q34	1	1
Del_11q23.3	Del_16q24.3	1	1
Del_11q23.3	Del_19p13.3	1	1
Del_12q23.3	Del_14q23.3	1	1
Del_12q23.3	Del_15q13.3	1	1
Del_12q23.3	Del_15q21.1	1	1
Del_12q23.3	Del_16p13.3	1	1
Del_12q23.3	Del_16q23.1	1	1
Del_12q23.3	Del_19p13.3	1	1
Del_13q34	Del_16q24.3	1	1
Del_14q23.3	Del_19p13.3	1	1
Del_15q13.3	Del_15q21.1	1	1
Del_15q13.3	Del_16q23.1	1	1
Del_15q21.1	Del_16p13.3	1	1
Del_16p13.3	Del_16q12.1	1	1
Del_16p13.3	Del_16q23.1	1	1
Del_16p13.3	Del_16q24.3	1	1
Del_16q12.1	Del_16q23.1	1	1
Del_16q12.1	Del_16q24.3	1	1
Del_16q23.1	Del_16q24.3	1	1
Del_16q23.1	Del_19p13.3	1	1
Del_16q24.3	Del_19p13.3	1	1
NRAS	Amp_7q34	6.27e-05	1
BRAF	NRAS	9.93e-26	1
