Pipeline Input Name	Archive Result File REF	Comment [TCGA Archive Name]	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile.ai	Mutations-Significance_Analysis	Level_4	ai	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	Mutations-Significance_Analysis	Level_4	ai	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	B2M.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PTEN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	LARP4B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	CBWD1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	XYLT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	MUC6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	GNG12.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	DDX59.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KRT75.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	LRRN2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	MAP2K7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	JARID2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	ZFP36L2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	DCDC1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	WASF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PLEKHA6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	OR5M3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	C4orf6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	APC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KLF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	FBXW7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	HLA-B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	BCOR.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_png	STAD-TP_coMut.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile.ai	Mutations-Significance_Analysis	Level_4	ai	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	Mutations-Significance_Analysis	Level_4	ai	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	B2M.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PTEN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	LARP4B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	CBWD1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
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lego_plotter_mut_profile_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	DCDC1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	WASF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PLEKHA6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	OR5M3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	C4orf6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	APC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KLF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	FBXW7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	HLA-B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	BCOR.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_ai_path	STAD-TP.final_analysis_set.maf.mutation_profile.ai	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile.ai	Mutations-Significance_Analysis	Level_4	ai	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	Mutations-Significance_Analysis	Level_4	ai	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	B2M.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PTEN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	LARP4B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	CBWD1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	XYLT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	MUC6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	GNG12.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	DDX59.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KRT75.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	LRRN2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	MAP2K7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	JARID2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	ZFP36L2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	DCDC1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	WASF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PLEKHA6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	OR5M3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	C4orf6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	APC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KLF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	FBXW7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	HLA-B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	BCOR.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
mutsig_version	STAD-TP.MutSig_version.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile.ai	Mutations-Significance_Analysis	Level_4	ai	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	Mutations-Significance_Analysis	Level_4	ai	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	B2M.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PTEN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	LARP4B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	CBWD1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	XYLT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	MUC6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	GNG12.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	DDX59.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KRT75.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	LRRN2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	MAP2K7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	JARID2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	ZFP36L2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	DCDC1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	WASF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PLEKHA6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	OR5M3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	C4orf6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	APC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KLF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	FBXW7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	HLA-B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	BCOR.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coverage.png	STAD-TP.covplot.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile.ai	Mutations-Significance_Analysis	Level_4	ai	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	Mutations-Significance_Analysis	Level_4	ai	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	B2M.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PTEN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	LARP4B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	CBWD1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	XYLT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	MUC6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	GNG12.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	DDX59.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KRT75.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	LRRN2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	MAP2K7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	JARID2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	ZFP36L2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	DCDC1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	WASF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PLEKHA6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	OR5M3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	C4orf6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	APC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KLF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	FBXW7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	HLA-B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	BCOR.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
patients_c_and_r	STAD-TP.patients.counts_and_rates.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile.ai	Mutations-Significance_Analysis	Level_4	ai	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	Mutations-Significance_Analysis	Level_4	ai	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	B2M.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PTEN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	LARP4B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	CBWD1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	XYLT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	MUC6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	GNG12.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	DDX59.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KRT75.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	LRRN2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	MAP2K7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	JARID2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	ZFP36L2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	DCDC1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	WASF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PLEKHA6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	OR5M3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	C4orf6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	APC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KLF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	FBXW7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
coMut_plot_pdf	STAD-TP_coMut.pdf	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	HLA-B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
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bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile.ai	Mutations-Significance_Analysis	Level_4	ai	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	Mutations-Significance_Analysis	Level_4	ai	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	B2M.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PTEN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	LARP4B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	CBWD1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	XYLT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	MUC6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	GNG12.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	DDX59.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KRT75.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	LRRN2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	MAP2K7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	JARID2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	ZFP36L2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	DCDC1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	WASF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PLEKHA6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	OR5M3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	C4orf6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	APC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KLF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	FBXW7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	HLA-B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	BCOR.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
bar_plot	STAD-TP.bargraphs.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile.ai	Mutations-Significance_Analysis	Level_4	ai	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	Mutations-Significance_Analysis	Level_4	ai	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	B2M.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PTEN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	LARP4B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	CBWD1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	XYLT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	MUC6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	GNG12.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	DDX59.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KRT75.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	LRRN2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	MAP2K7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	JARID2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	ZFP36L2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	DCDC1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	WASF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PLEKHA6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	OR5M3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	C4orf6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	APC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KLF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	FBXW7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	HLA-B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	BCOR.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
lego_plotter_mut_profile_AF_png_path	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.sig_genes.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.bargraphs.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile.ai	Mutations-Significance_Analysis	Level_4	ai	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile_AF.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf.mutation_profile_AF.ai	Mutations-Significance_Analysis	Level_4	ai	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP_coMut.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP_coMut.pdf	Mutations-Significance_Analysis	Level_4	pdf	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.covplot.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.patients.counts_and_rates.txt	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	STAD-TP.final_analysis_set.maf	Mutations-Significance_Analysis	Level_4	text	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	TP53.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	ARID1A.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	B2M.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PIK3CA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PTEN.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	RNF43.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	LARP4B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	CBWD1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	XYLT2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	MUC6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	GNG12.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PGM5.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	DDX59.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KRT75.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	CDH1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	LRRN2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	MAP2K7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	JARID2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	ZFP36L2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	DCDC1.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	WASF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	PLEKHA6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	OR5M3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	SMAD4.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	IRF2.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	C4orf6.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KRAS.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	RHOA.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	APC.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	KLF3.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	FBXW7.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	HLA-B.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	BCOR.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	EDNRB.stick_fig.png	Mutations-Significance_Analysis	Level_4	png	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
sig_table	STAD-TP.sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:00412:47	MutSigNozzleReportCV_2016012800	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_STAD-TP.MutSigNozzleReportCV.Level_4.2016012800.0.0	yes
